Tsuda Kouji 津田宏治

… Alternative Names

TSUDA Koji 津田宏治

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Researcher Number	90357517
Other IDs
External Links
Affiliation (Current)	2025: 東京大学, 大学院新領域創成科学研究科, 教授 2025: 国立研究開発法人理化学研究所, 革新知能統合研究センター, チームディレクター
Affiliation (based on the past Project Information) *help	2015 – 2023: 東京大学, 大学院新領域創成科学研究科, 教授 2017: 東京大学, 新領域創成科学研究科, 教授 2014 – 2015: 東京大学, 新領域創成科学研究科, 教授 2014: 東京大学, 大学院新領域創成科学研究科・情報生命科学専攻, 教授 2013: 独立行政法人産業技術総合研究所, その他部局等, 研究員 … More 2012: 産業技術総合研究所, 生命情報工学研究センター, 主任研究員 2010 – 2012: 独立行政法人産業技術総合研究所, 生命情報工学研究センター, 主任研究員 2009: National Institute of Advanced Industrial Science and Technology, 生命情報工学研究センター, 研究員 Less
Review Section/Research Field	Principal Investigator Science and Engineering / Bioinformatics/Life informatics Except Principal Investigator Science and Engineering / Medium-sized Section 61:Human informatics and related fields / Medium-sized Section 27:Chemical engineering and related fields / Intelligent informatics / Intelligent informatics / Life / Health / Medical informatics / Bioinformatics/Life informatics / Sensitivity informatics/Soft computing
Keywords	Principal Investigator 機械学習 / マテリアルズインフォマティクス / 生理活性 / 生体分子 Except Principal Investigator 機械学習 / ナノ構造情報 / 材料設計・創出 / インフォマティクス / ナノ材料科学 / 人工知能 … More / ゲノム / タンパク質 / 医療情報学 / 統計的推測 / 教師なし学習 / 生命科学 / 選択的推論 / 統計科学 / 統計的仮説検定 / データサイエンス / 抗体 / 進化分子工学 / インフォマティックス / 網羅的解析 / グラフアルゴリズム / BDD / 索引化 / 演算処理系 / データ構造 / ZDD / 列挙アルゴリズム / 二分決定グラフ / 離散構造処理系 / 列挙 / 最適化 / グラフ理論 / 大規模データ処理 / 組合せ集合 / 論理関数 / アルゴリズム / 離散構造 / プロテオーム / 生体生命情報学 / グラフマイニング / 知識発見とデータマイニング / 配列検索 / データベース検索 / 暗号 / 化合物 / プライバシー / 準同型暗号 / 配列アラインメント / PPDM / 隠れマルコフモデル / アラインメント / 化合物検索 / プライバシー保護 / データマイニング / 第一原理計算 / データベース / 低分子化合物 / 低分子医薬品 / 機能部位 / 基質結合部位 / 確率的情報処理 / 情報統計力学 / 統計数学 / 数理工学 Less

Evolutionary Molecular Engineering Guided by Machine Learning: Smart Maturation Process for Cancer Therapeutic Antibodies
- Principal Investigator
  
  Umetsu Mitsuo
- Project Period (FY)
  2020 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 27:Chemical engineering and related fields
- Research Institution
  Tohoku University
探索的分析によるデータ駆動型仮説の信頼性評価法の確立と生命科学分野における実証
- Principal Investigator
  
  竹内一郎
- Project Period (FY)
  2020 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 61:Human informatics and related fields
- Research Institution
  Nagoya University
  Nagoya Institute of Technology
Development of machine learning methods for materials informaticsPrincipal Investigator
- Principal Investigator
  
  Tsuda Koji
- Project Period (FY)
  2016 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Science and Engineering
- Research Institution
  The University of Tokyo
Research on Fundamental Algorithms of Discrete Structure Manipulation Systems
- Principal Investigator
  
  MINATO Shin-ichi
- Project Period (FY)
  2015 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Intelligent informatics
- Research Institution
  Kyoto University
  Hokkaido University
Exploration of nanostructure-property relationships for materials innovation
- Principal Investigator
  
  TANAKA Isao
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Science and Engineering
- Research Institution
  Kyoto University
Exploration of nanostructure-property relationships
- Principal Investigator
  
  Tanaka Isao
- Project Period (FY)
  2013 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Science and Engineering
- Research Institution
  Kyoto University
Development of basic technology for privacy-preserving bioinformatics and its application
- Principal Investigator
  
  Hamada Michiaki
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Waseda University
  The University of Tokyo
Exploration of nanostructure - property relationships for materials innovation
- Principal Investigator
  
  TANAKA Isao
- Project Period (FY)
  2013 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Science and Engineering
- Research Institution
  Kyoto University
Estimating data structure embedded in semi-structured data
- Principal Investigator
  
  Mamitsuka Hiroshi
- Project Period (FY)
  2012 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Intelligent informatics
- Research Institution
  Kyoto University
Development of ultra-fast comparison method of protein local structures towards the prediction of ligand-binding sites
- Principal Investigator
  
  TOMII KENTARO
- Project Period (FY)
  2011 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Creative extensions of data mining theory by means of quantum-mechanical labeling
- Principal Investigator
  
  TANAKA Kazuyuki
- Project Period (FY)
  2010 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Sensitivity informatics/Soft computing
- Research Institution
  Tohoku University
In-silico prediction of active comformations by machine learningPrincipal Investigator
- Principal Investigator
  
  TSUDA Koji
- Project Period (FY)
  2009 – 2012
- Research Category
  
  Grant-in-Aid for Young Scientists (A)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  National Institute of Advanced Industrial Science and Technology

All 2022 2021 2020 2019 2017 2016 2015 2014 2013 2012 2011 2010 2009

All Journal Article Presentation

[Journal Article] Fast and More Powerful Selective Inference for Sparse High-order Interaction Model2022
- Author(s)
  Diptesh Das, Vo Nguyen Le Duy, Hiroyuki Hanada, Koji Tsuda, Ichiro Takeuchi
- Journal Title
  
  Proceedings of AAAI Conference on Artificial Intelligence (AAAI2022)
  
  Volume: NA
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20H00601
[Journal Article] Selective inference for high-order interaction features selected in a stepwise manner2021
- Author(s)
  Shinya Suzumura, Kazuya Nakagawa, Yuta Umezu, Koji Tsuda, Ichiro Takeuchi
- Journal Title
  
  IPSJ Transactions on Bioinformatics
  
  Volume: 14 Issue: 0 Pages: 1-11
- DOI
  10.2197/ipsjtbio.14.1
- NAID
  130007985966
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-16H06538, KAKENHI-PROJECT-20H00601, KAKENHI-PROJECT-18K18010
[Journal Article] Efficient Query Autocompletion with Edit Distance-based Error Tolerance2020
- Author(s)
  Jianbin Qin, Chuan Xiao, Sheng Hu, Jie Zhang, Wei Wang, Yoshiharu Ishikawa, Koji Tsuda, Kunihiko Sadakane
- Journal Title
  
  The VLDB Journal
  
  Volume: - Issue: 4 Pages: 919-943
- DOI
  10.1007/s00778-019-00595-4
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K11979, KAKENHI-PROJECT-15H05711
[Journal Article] Legendre decomposition for tensors2019
- Author(s)
  Sugiyama Mahito、Nakahara Hiroyuki、Tsuda Koji
- Journal Title
  
  Journal of Statistical Mechanics: Theory and Experiment
  
  Volume: 2019 Issue: 12 Pages: 124017-124017
- DOI
  10.1088/1742-5468/ab3196
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] ChemTS: an efficient python library for de novo molecular generation2017
- Author(s)
  Yang Xiufeng、Zhang Jinzhe、Yoshizoe Kazuki、Terayama Kei、Tsuda Koji
- Journal Title
  
  Science and Technology of Advanced Materials
  
  Volume: 18 Issue: 1 Pages: 972-976
- DOI
  10.1080/14686996.2017.1401424
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H00736
[Journal Article] Machine Learning Accelerates MD-based Binding-Pose Prediction between Ligands and Proteins2017
- Author(s)
  K. Terayama, H. Iwata, M. Araki, Y. Okuno and K. Tsuda
- Journal Title
  
  Bioinformatics
  
  Volume: 34 Issue: 5 Pages: 770-778
- DOI
  10.1093/bioinformatics/btx638
- NAID
  120006501308
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] RNA inverse folding using Monte Carlo tree search2017
- Author(s)
  Yang Xiufeng、Yoshizoe Kazuki、Taneda Akito、Tsuda Koji
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 18 Issue: 1 Pages: 468-468
- DOI
  10.1186/s12859-017-1882-7
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-16H00736, KAKENHI-PROJECT-15H05711
[Journal Article] MDTS: automatic complex materials design using Monte Carlo tree search2017
- Author(s)
  M. Dieb Thaer、Ju Shenghong、Yoshizoe Kazuki、Hou Zhufeng、Shiomi Junichiro、Tsuda Koji
- Journal Title
  
  Science and Technology of Advanced Materials
  
  Volume: 18 Issue: 1 Pages: 498-503
- DOI
  10.1080/14686996.2017.1344083
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-16H00736
[Journal Article] Transfer Learning to Accelerate Interface Structure Searches2017
- Author(s)
  Oda Hiromi、Kiyohara Shin、Tsuda Koji、Mizoguchi Teruyasu
- Journal Title
  
  Journal of the Physical Society of Japan
  
  Volume: 86 Issue: 12 Pages: 123601-123601
- DOI
  10.7566/jpsj.86.123601
- NAID
  210000134600
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-16H00736, KAKENHI-PLANNED-25106003, KAKENHI-PROJECT-17H06094
[Journal Article] Significant Pattern Mining with Confounding Variables2016
- Author(s)
  A. Terada, D.A. duVerle and K. Tsuda
- Journal Title
  
  20th Pacific Asia Conference on Knowledge Discovery and Data Mining (PAKDD)（査読付き国際会議論文）
  
  Volume: - Pages: 277-289
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] Sparse Modeling of EELS and EDX Spectral Imaging Data by Nonnegative Matrix Factorization2016
- Author(s)
  Motoki Shiga, Kazuyoshi Tatsumi, Shunsuke Muto, Koji Tsuda, Yuta Yamamoto, Toshiyuki Mori, Takayoshi Tanji
- Journal Title
  
  Ultramicroscopy
  
  Volume: 170 Pages: 43-59
- DOI
  10.1016/j.ultramic.2016.08.006
- Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H00736, KAKENHI-PUBLICLY-16H01544, KAKENHI-PLANNED-25106004, KAKENHI-PROJECT-26249096, KAKENHI-PROJECT-16H02866
[Journal Article] Information Decomposition on Structured Space2016
- Author(s)
  M. Sugiyama, H. Nakahara and K. Tsuda
- Journal Title
  
  2016 IEEE International Symposium on Information Theory（査読付き国際会議論文）
  
  Volume: - Pages: 575-579
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] LAMPLINK: detection of statistically significant SNP combinations from GWAS data2016
- Author(s)
  A. Terada, R. Yamada, K. Tsuda and J. Sese
- Journal Title
  
  Bioinformatics
  
  Volume: 32 (22) Pages: 3513-3515
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] Machine-learning prediction of d-band center for metals and bimetals2016
- Author(s)
  I. Takigawa, K. Shimizu, K. Tsuda and S. Takakusagi
- Journal Title
  
  RSC Advances
  
  Volume: 6 Pages: 52587-52595
- NAID
  120006219935
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] COMBO: An Efficient Bayesian Optimization Library for Materials Science2016
- Author(s)
  T. Ueno, T.D. Rhone, Z. Hou, T. Mizoguchi and K. Tsuda
- Journal Title
  
  Materials Discovery
  
  Volume: 4 Pages: 18-21
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] Matrix Factorization for Automatic Chemical Mapping from Electron Microscopic Spectral Imaging Datasets2016
- Author(s)
  Motoki Shiga, Shunsuke Muto, Kazuyoshi Tatsumi, Koji Tsuda
- Journal Title
  
  Transactions of the Materials Research Society of Japan
  
  Volume: 41 Issue: 4 Pages: 333-336
- DOI
  10.14723/tmrsj.41.333
- NAID
  130005172417
- ISSN
  1382-3469, 2188-1650
- Language
  English
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PLANNED-16H00736, KAKENHI-PLANNED-25106004, KAKENHI-PROJECT-26249096, KAKENHI-PROJECT-16H02866
[Journal Article] CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data2016
- Author(s)
  D. A. duVerle, S. Yotsukura, S. Nomura, H. Aburatani and K. Tsuda
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 17 Pages: 363-363
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05711
[Journal Article] Machine-learning prediction of d-band center for metals and bimetals2016
- Author(s)
  I. Takigawa, K. Shimizu, K. Tsuda and S. Takakusagi
- Journal Title
  
  RSC Advances
  
  Volume: 6 Issue: 58 Pages: 52587-52595
- DOI
  10.1039/c6ra04345c
- NAID
  120006219935
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-16H00736, KAKENHI-PLANNED-25106010, KAKENHI-PROJECT-26289299, KAKENHI-PROJECT-26330242
[Journal Article] COMBO: An Efficient Bayesian Optimization Library for Materials Science2016
- Author(s)
  T. Ueno, T.D. Rhone, Z. Hou, T. Mizoguchi and K. Tsuda
- Journal Title
  
  Materials Discovery
  
  Volume: 4 Pages: 18-21
- DOI
  10.1016/j.md.2016.04.001
- Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H00736, KAKENHI-PLANNED-25106003
[Journal Article] Prediction of Low-Thermal-Conductivity Compounds with First-Principles Anharmonic Lattice-Dynamics Calculations and Bayesian Optimization2015
- Author(s)
  Atsuto Seko, Atsushi Togo, Hiroyuki Hayashi, Koji Tsuda, Laurent Chaput, Isao Tanaka
- Journal Title
  
  Physical Review Letters
  
  Volume: 115 Issue: 20 Pages: 205901-205901
- DOI
  10.1103/physrevlett.115.205901
- NAID
  120005670878
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-24106010, KAKENHI-PLANNED-25106005, KAKENHI-PROJECT-15H02286, KAKENHI-PROJECT-26820284
[Journal Article] Privacy-preserving search for chemical compound databases2015
- Author(s)
  Kana Shimizu, Koji Nuida, Hiromi Arai, Shigeo Mitsunari, Nuttapong Attrapadung, Michiaki Hamada, Koji Tsuda, Takatsugu Hirokawa, Jun Sakuma, Goichiro Hanaoka, Kiyoshi Asai
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 16(Suppl 18):S6 Issue: S18 Pages: 1-14
- DOI
  10.1186/1471-2105-16-s18-s6
- NAID
  120007128511
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-24106010, KAKENHI-PROJECT-25540131
[Journal Article] Machine learning with systematic density-functional theory calculations : Application to melting temperatures of single- and binary-component solids2014
- Author(s)
  Seko, Atsuto; Maekawa, Tomoya ; Tsuda, Koji and Tanaka, Isao
- Journal Title
  
  Physical Review B
  
  Volume: Vol.89 Issue: 5 Pages: 54303-54303
- DOI
  10.1103/physrevb.89.054303
- NAID
  120005466623
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23246111, KAKENHI-PLANNED-24106010, KAKENHI-PLANNED-25106005
[Journal Article] An In Silico Model for Interpreting Polypharmacological Relationships in Drug-Target Networks2013
- Author(s)
  Ichigaku Takigawa, Koji Tsuda, Hiroshi Mamitsuka
- Journal Title
  
  Methods in Molecular Biology (In Silico Models for Drug Discovery)
  
  Volume: 993 Pages: 67-80
- DOI
  10.1007/978-1-62703-342-8_5
- ISBN
  9781627033411, 9781627033428
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710233, KAKENHI-PROJECT-24300054
[Journal Article] PDB-scale Analysis of Known and Putative Ligand-binding Sites with Structural Sketches2012
- Author(s)
  J. Ito, Y. Tabei, K. Shimizu, K. Tomii and K. Tsuda
- Journal Title
  
  Proteins
  
  Volume: 80 Issue: 3 Pages: 747-763
- DOI
  10.1002/prot.23232
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025, KAKENHI-PROJECT-23500374
[Journal Article] PoSSuM: a Database of Similar Protein-Ligand Binding and Putative Pockets2012
- Author(s)
  J. Ito, Y. Tabei, K. Shimizu, K. Tsuda and K. Tomii
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 40 Issue: D1 Pages: D541-D548
- DOI
  10.1093/nar/gkr1130
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025, KAKENHI-PROJECT-23500374
[Journal Article] SketchSort: Fast All Pairs Similarity Search for Large Databases of Molecular Fingerprints2011
- Author(s)
  Y. Tabei and K. Tsuda
- Journal Title
  
  Molecular Informatics
  
  Volume: 30 Issue: 9 Pages: 801-807
- DOI
  10.1002/minf.201100050
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025
[Journal Article] SlideSort : All Pairs Similarity Search for Short Reads2011
- Author(s)
  Kana Shimizu, Koji Tsuda
- Journal Title
  
  Bioinformatics
  
  Volume: 27 Pages: 464-470
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025
[Journal Article] Mining Significant Substructure Pairs for Interpreting Polypharmacology in Drug-Target Network2011
- Author(s)
  Ichigaku Takigawa, Koji Tsuda, Hiroshi Mamitsuka
- Journal Title
  
  Plos One
  
  Volume: 6
- NAID
  120002949745
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025
[Journal Article] SlideSort: All Pairs Similarity Search for Short Reads2011
- Author(s)
  K. Shimizu and K. Tsuda
- Journal Title
  
  Bioinformatics
  
  Volume: 27 Issue: 4 Pages: 464-470
- DOI
  10.1093/bioinformatics/btq677
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025, KAKENHI-PROJECT-22700319
[Journal Article] Multi-Way Set Enumeration in Weight Tensors2011
- Author(s)
  Elisabeth Georgii, Koji Tsuda, Bernhard Schoelkopf
- Journal Title
  
  Machine Learning
  
  Volume: 82 Pages: 123-155
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025
[Journal Article] Reaction Graph Kernels Predict EC Numbers of Unknown Enzymatic Reactions in Plant Secondary Metabolism2010
- Author(s)
  H.Saigo, M.Hattori, H.Kashima, K.Tsuda
- Journal Title
  
  BMC Bioinformatics 11, Suppl.1
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025
[Journal Article] Submodularity Cuts and Applications2009
- Author(s)
  Y.Kawahara, K.Nagano, K.Tsuda, J.Bilmes
- Journal Title
  
  Advances in Neural Information Processing Systems 22
  
  Pages: 916-924
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025
[Journal Article] Efficiently Finding Genome-wide Three-way Interactions from Transcript and Genotype-Data2009
- Author(s)
  M.Kayano, I.Takigawa, M.Shiga, K.Tsuda, H.Mamitsuka
- Journal Title
  
  Bioinformatics 25
  
  Pages: 2735-2743
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21680025
[Presentation] Fast and More Powerful Selective Inference for Sparse High-order Interaction Model2022
- Author(s)
  Diptesh Das, Vo Nguyen Le Duy, Hiroyuki Hanada, Koji Tsuda, Ichiro Takeuchi
- Organizer
  AAAI Conference on Artificial Intelligence (AAAI2022)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20H00601
[Presentation] Application of next-generation sequencing analysis in the directed evolution for creating antibody mimic2021
- Author(s)
  Tomoyuki Ito, Hafumi Nishi, Thuy Duong Nguyen, Yutaka Saito, Tomoshi Kameda, Hikaru Nakazawa, Koji Tsuda, Mitsuo Umetsu
- Organizer
  65th Biophysical Society Annual Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20H00315
[Presentation] Automatic design of functional molecules and materials2017
- Author(s)
  Koji Tsuda
- Organizer
  20th International Conference on Discovery Science
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05711
[Presentation] Machine learning for materials discovery: catalysts, grain boundaries, superlattices and RNAs2016
- Author(s)
  Koji Tsuda
- Organizer
  Workshop I: Machine Learning Meets Many Particle Systems
- Place of Presentation
  IPAM, UCLA, Los Angeles, USA
- Year and Date
  2016-09-26
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H00736
[Presentation] 走査型電子顕微鏡データ解析のための非負値行列分解2016
- Author(s)
  志賀元紀, 武藤俊介, 巽一厳, 津田宏治
- Organizer
  日本応用数理学会2016年度年会
- Place of Presentation
  北九州市北九州国際会議場
- Year and Date
  2016-09-12
- Invited
- Data Source
  KAKENHI-PLANNED-16H00736
[Presentation] Machine Learning for Materials Discovery: Low-LTC Compounds, GrainBoundaries and Superlattices2016
- Author(s)
  Koji Tsuda
- Organizer
  IACS Seminar
- Place of Presentation
  Harvard University, Boston USA
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H00736
[Presentation] Privacy-preserving search for a chemical compound database2013
- Author(s)
  Kana Shimizu, Hiromi Arai, Koji Nuida, Michiaki Hamada, Koji Tsuda, Jun Sakuma, Takatsugu Hirokawa, Goichiro Hanaoka, Kiyoshi Asai,
- Organizer
  ISMB/ECCB 2013
- Place of Presentation
  ベルリン、ドイツ
- Data Source
  KAKENHI-PROJECT-25540131
[Presentation] PoSSuM: a database for predicting protein-ligand Interactions2012
- Author(s)
  K. Tomii, J. Ito, Y. Tabei, K. Shimizu, K. Tsuda
- Organizer
  生命医薬情報学連合大会(2012年日本バイオインフォマティクス学会年会情報計算化学生物学会（CBI学会）年次大会オミックス医療研究会年会)
- Place of Presentation
  タワーホール船堀(東京都)
- Data Source
  KAKENHI-PROJECT-23500374
[Presentation] PoSSuM: a database for searching similar pairs of known and potential ligand-binding sites in proteins2012
- Author(s)
  J. Ito, Y. Tabei, K. Shimizu, K. Tsuda, K. Tomii
- Organizer
  第50回日本生物物理学会年会
- Place of Presentation
  名古屋大学
- Data Source
  KAKENHI-PROJECT-23500374
[Presentation] Possum: A Database for Predicting Protein-Ligand Interactions2012
- Author(s)
  K. Tomii, J. Ito, Y . Tabei, K. Shimizu, K.Tsuda
- Organizer
  生命医薬情報学連合大会
- Place of Presentation
  東京都、タワーホール船堀
- Year and Date
  2012-10-14
- Data Source
  KAKENHI-PROJECT-21680025
[Presentation] PoSSuM: a database of known and potential ligand-binding sites in proteins2012
- Author(s)
  J. Ito, Y. Tabei, K. Shimizu, K. Tsuda, K. Tomii
- Organizer
  Bioinformatics 2012, SocBiN
- Place of Presentation
  Stockholm, Sweden
- Data Source
  KAKENHI-PROJECT-23500374
[Presentation] Pdb-wide discovery of similar ligand binding sites Using structural sketches2011
- Author(s)
  J. Ito, Y. Tabei, K. Shimizu, K.Tomii, K. Tsuda
- Organizer
  3DSIG 2011: The 7th Structural Bioinformatics and Computational Biophysics
- Place of Presentation
  Austria Center Vienna (Austria)
- Data Source
  KAKENHI-PROJECT-23500374
[Presentation] Structural Sketchを用いたタンパク質リガンド類似結合部位の高速列挙とそのデータベース構築2011
- Author(s)
  伊東純一、田部井靖生、清水佳奈、富井健太郎、津田宏治
- Organizer
  第11回日本蛋白質科学会年会
- Place of Presentation
  ホテル阪急エキスポパーク (大阪府)
- Data Source
  KAKENHI-PROJECT-23500374
[Presentation] A novel ultra-fast comparison method for known and potential ligand-binding sites of proteins2011
- Author(s)
  K.Tomii, J. Ito, Y. Tabei, K. Shimizu, K. Tsuda
- Organizer
  19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology
- Place of Presentation
  Austria Center Vienna (Austria)
- Data Source
  KAKENHI-PROJECT-23500374

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Tsuda Kouji 津田 宏治

TSUDA Koji 津田 宏治

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Development of machine learning methods for materials informaticsPrincipal Investigator

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In-silico prediction of active comformations by machine learningPrincipal Investigator

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[Journal Article] Fast and More Powerful Selective Inference for Sparse High-order Interaction Model2022

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[Journal Article] Selective inference for high-order interaction features selected in a stepwise manner2021

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[Journal Article] Efficient Query Autocompletion with Edit Distance-based Error Tolerance2020

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Tsuda Kouji 津田宏治

TSUDA Koji 津田宏治