Shimizu Takayuki 清水隆之

Researcher Number	90817214
Other IDs	https://orcid.org/0000-0002-2956-9386
Affiliation (Current)	2025: 奈良女子大学, 自然科学系, 准教授
Affiliation (based on the past Project Information) *help	2023 – 2025: 奈良女子大学, 自然科学系, 准教授 2023: 奈良女子大学, 研究院自然科学系生物科学領域, 准教授 2018 – 2022: 東京大学, 大学院総合文化研究科, 助教
Review Section/Research Field	Principal Investigator Basic Section 43030:Functional biochemistry-related / Medium-sized Section 43:Biology at molecular to cellular levels, and related fields Except Principal Investigator Transformative Research Areas, Section (III) / Medium-sized Section 38:Agricultural chemistry and related fields
Keywords	Principal Investigator 硫化水素 / システイン修飾 / 硫黄代謝 / ポリスルフィド / 細菌 / パースルフィド / シグナル制御 / 転写制御 / 光合成細菌 / トランスポーター … More Except Principal Investigator … More 活性硫黄 / 細菌 / 転写因子 / 大腸菌 / 活性硫黄分子種 / 転写制御 / 土壌細菌 / 光合成細菌 / 超硫黄 / 硫化水素 / 植物 / 藻類 / リン欠乏時の脂質転換 / トリアシルグリセロール / スルホ脂質 Less

超硫黄分子輸送体の機能解析による生理機能制御システムの解明Principal Investigator
- Principal Investigator
  
  清水隆之
- Project Period (FY)
  2025 – 2027
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 43030:Functional biochemistry-related
- Research Institution
  Nara Women's University
環状化硫黄S8による超硫黄分子シグナル伝達の制御機構Principal Investigator
- Principal Investigator
  
  清水隆之
- Project Period (FY)
  2023 – 2026
- Research Category
  
  Fund for the Promotion of Joint International Research (International Collaborative Research)
- Review Section
  
  Medium-sized Section 43:Biology at molecular to cellular levels, and related fields
- Research Institution
  Nara Women's University
Molecular basis of signaling mechanisms via protein polysulfidationPrincipal Investigator
- Principal Investigator
  
  Shimizu Takayuki
- Project Period (FY)
  2021 – 2022
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43030:Functional biochemistry-related
- Research Institution
  The University of Tokyo
硫化水素によるシグナル伝達
- Principal Investigator
  
  増田真二
- Project Period (FY)
  2021 – 2025
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Institute of Science Tokyo
Molecular analysis of persulfide dependent signaling involved in bioactive regulationPrincipal Investigator
- Principal Investigator
  
  Shimizu Takayuki
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43030:Functional biochemistry-related
- Research Institution
  The University of Tokyo
Molecular basis
- Principal Investigator
  
  Ohta Hiroyuki
- Project Period (FY)
  2018 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 38:Agricultural chemistry and related fields
- Research Institution
  Tokyo Institute of Technology

All 2024 2023 2022 2021 2020 2019 2018

All Journal Article Presentation

[Journal Article] Thioredoxin-2 Regulates SqrR-Mediated Polysulfide-Responsive Transcription via Reduction of a Polysulfide Link in SqrR2023
- Author(s)
  Shimizu Takayuki、Hashimoto Masaru、Masuda Tatsuru
- Journal Title
  
  Antioxidants
  
  Volume: 12 Issue: 3 Pages: 699-699
- DOI
  10.3390/antiox12030699
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-ORGANIZER-21H05258, KAKENHI-PLANNED-21H05271, KAKENHI-PROJECT-18H03941, KAKENHI-PROJECT-20K06681, KAKENHI-PROJECT-21K15038
[Journal Article] Polysulfide metabolizing enzymes influence SqrR-mediated sulfide-induced transcription by impacting intracellular polysulfide dynamics2023
- Author(s)
  Shimizu Takayuki、Ida Tomoaki、Antelo Giuliano T、Ihara Yuta、Fakhoury Joseph N、Masuda Shinji、Giedroc David P、Akaike Takaaki、Capdevila Daiana A、Masuda Tatsuru
- Journal Title
  
  PNAS Nexus
  
  Volume: 2 Issue: 3 Pages: 1-11
- DOI
  10.1093/pnasnexus/pgad048
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K19397, KAKENHI-ORGANIZER-21H05258, KAKENHI-PLANNED-21H05271, KAKENHI-PROJECT-18H03941, KAKENHI-PROJECT-20K06681, KAKENHI-PROJECT-20K07306, KAKENHI-PROJECT-21K15038, KAKENHI-PROJECT-23K06386, KAKENHI-PLANNED-21H05263, KAKENHI-PROJECT-18H05277
[Journal Article] Translation Enhancement by a Short Nucleotide Insertion at 5′UTR: Application to an In Vitro Cell-Free System and a Photosynthetic Bacterium2023
- Author(s)
  Kondo Tomo、Shimizu Takayuki
- Journal Title
  
  Applied Microbiology
  
  Volume: 3 Issue: 3 Pages: 687-697
- DOI
  10.3390/applmicrobiol3030047
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23KK0127, KAKENHI-ORGANIZER-21H05258, KAKENHI-PLANNED-21H05271
[Journal Article] Persulfide-Responsive Transcription Factor SqrR Regulates Gene Transfer and Biofilm Formation via the Metabolic Modulation of Cyclic di-GMP in Rhodobacter capsulatus2022
- Author(s)
  Shimizu Takayuki、Aritoshi Toma、Beatty J. Thomas、Masuda Tatsuru
- Journal Title
  
  Microorganisms
  
  Volume: 10 Issue: 5 Pages: 908-908
- DOI
  10.3390/microorganisms10050908
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-21H05258, KAKENHI-PLANNED-21H05271, KAKENHI-PROJECT-18H03941, KAKENHI-PROJECT-20K06681
[Journal Article] The Sulfide-Responsive SqrR/BigR Homologous Regulator YgaV of Escherichia coli Controls Expression of Anaerobic Respiratory Genes and Antibiotic Tolerance2022
- Author(s)
  Balasubramanian Rajalakshmi、Hori Koichi、Shimizu Takayuki、Kasamatsu Shingo、Okamura Kae、Tanaka Kan、Ihara Hideshi、Masuda Shinji
- Journal Title
  
  Antioxidants
  
  Volume: 11 Issue: 12 Pages: 2359-2359
- DOI
  10.3390/antiox11122359
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K06148, KAKENHI-PROJECT-22K19159, KAKENHI-ORGANIZER-21H05258, KAKENHI-PLANNED-21H05271, KAKENHI-PROJECT-18H03941, KAKENHI-PROJECT-21H02082, KAKENHI-PROJECT-21K15038, KAKENHI-PROJECT-23K23503
[Journal Article] The Role of Tetrapyrrole- and GUN1-Dependent Signaling on Chloroplast Biogenesis2021
- Author(s)
  Shimizu T, MasudaT
- Journal Title
  
  Plants
  
  Volume: 10 Issue: 2 Pages: 196-196
- DOI
  10.3390/plants10020196
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K06681, KAKENHI-PROJECT-18K14650, KAKENHI-PROJECT-18H03941, KAKENHI-PROJECT-21K15038
[Journal Article] Repressor Activity of SqrR, a Master Regulator of Persulfide-Responsive Genes, Is Regulated by Heme Coordination2021
- Author(s)
  Shimizu T, Hayashi Y, Arai M, McGlynn SE, Masuda T, Masuda S
- Journal Title
  
  Plant Cell Physiol
  
  Volume: 62 Issue: 1 Pages: 100-110
- DOI
  10.1093/pcp/pcaa144
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K06681, KAKENHI-PROJECT-19H02521, KAKENHI-PROJECT-18K14650, KAKENHI-PROJECT-18H03941, KAKENHI-PLANNED-21H05271
[Journal Article] Proteomic analysis of haem-binding protein from Arabidopsis thaliana and Cyanidioschyzon merolae2020
- Author(s)
  Takayuki Shimizu, Rintaro Yasuda, Yui Mukai, Ryo Tanoue, Tomohiro Shimada, Sousuke Imamura, Kan Tanaka, Satoru Watanabe and Tatsuru Masuda
- Journal Title
  
  Philosophical Transactions of the Royal Society B
  
  Volume: 375 Issue: 1801 Pages: 20190488-20190488
- DOI
  10.1098/rstb.2019.0488
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-19H04720, KAKENHI-PROJECT-18H02124, KAKENHI-PROJECT-18K14650, KAKENHI-PROJECT-18H03941
[Journal Article] The retrograde signaling protein GUN1 regulates tetrapyrrole biosynthesis.2019
- Author(s)
  Shimizu, T., Kacprzak, S.M., Mochizuki, N., Nagatani, A., Watanabe, S., Shimada, T., Tanaka, K., Hayashi, Y., Arai, M., Leister, D., Okamoto, H., Terry, M.J., & Masuda, T.
- Journal Title
  
  Proc. Natl. Acad. Sci. USA
  
  Volume: 116 Issue: 49 Pages: 24900-24906
- DOI
  10.1073/pnas.1911251116
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K05386, KAKENHI-PROJECT-18K14650, KAKENHI-PUBLICLY-19H04720, KAKENHI-PROJECT-18H02124, KAKENHI-PROJECT-18H03941, KAKENHI-PROJECT-19H02521
[Journal Article] Persulphide-responsive transcriptional regulation and metabolism in bacteria2019
- Author(s)
  Shimizu Takayuki、Masuda Shinji
- Journal Title
  
  The Journal of Biochemistry
  
  Volume: 167 Pages: 125-132
- DOI
  10.1093/jb/mvz063
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K22418, KAKENHI-PROJECT-18K14650, KAKENHI-PUBLICLY-19H04719, KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素がシロイヌナズナの葉緑体形成における光合成器官の制御に与える影響2024
- Author(s)
  清水隆之, オスマンズリナ, 増田建
- Organizer
  第65回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 紅色光合成細菌をモデルとした超硫黄分子シグナル制御システムの解析2024
- Author(s)
  清水隆之
- Organizer
  第3回原核光合成生物シンポジウム
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 硫化水素がシロイヌナズナの葉緑体形成における光合成器官の制御に与える影響2024
- Author(s)
  清水隆之, オスマンズリナ, 増田建
- Organizer
  第65回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] Cytosolic heme metabolism by alternative localization of heme oxygenase 1 in plant cells2024
- Author(s)
  Yingxi Chen, Kohji Nishimura, Mutsutomo Tokizawa, Yoshiharu, Y. Yamamoto, Yoshito Oka, Tomonao Matsushita, Kousuke Hanada, Kazumasa Shirai, Shoji Mano, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第66回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] 紅色光合成細菌をモデルとした超硫黄分子シグナル制御システムの解析2024
- Author(s)
  清水隆之
- Organizer
  第3回原核光合成生物シンポジウム
- Invited
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] Enhancement of accumulation of photosynthetic pigments and proteins during chloroplast biogenesis by sulfide in Arabidopsis thaliana2023
- Author(s)
  Zurina Osuman, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 植物の器官発生におけるシトクロムb5様ヘム結合タンパク質RLFの機能解析2023
- Author(s)
  岩田健太郎、後藤千恵子、福村日向丸、清水隆之、丸山海成、古谷朋之、近藤侑貴、笠原博幸、増田建、石崎公庸、深城英弘
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] 植物の器官発生におけるシトクロムb5様ヘム結合タンパク質RLFの機能解析2023
- Author(s)
  岩田健太郎、後藤千恵子、福村日向丸、清水隆之、丸山海成、古谷朋之、近藤侑貴、笠原博幸、増田建、石崎公庸、深城英弘
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Cytoplasmic Heme Decomposition by Heme Oxygenase 1 produced by Transcription Start Sites Regulation is Critical for Chloroplast Biogenesis2023
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Yoshito Oka, Tomonao Matsushita, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  15th International Conference on Tetrapyrrole Photoreceptors in Photosynthetic Organisms
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] ヘムシグナルによる側根形態制御にはpre-mRNAスプライシング制御が介在する2023
- Author(s)
  高柳なつ, 荒江星拓, 高橋洋和, 清水隆之, 堀口吾朗, 相田光宏, 深城英弘, 増田建, 大谷美沙都
- Organizer
  第87回日本植物学会
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] ゼニゴケにおけるオリゴガラクト脂質合成能と機能の解析2023
- Author(s)
  清水信介，堀孝一，石崎公庸，下嶋美恵，太田啓之
- Organizer
  第64回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] シロイヌナズナの葉緑体形成における硫化水素による光合成器官の制御2023
- Author(s)
  清水隆之, オスマンズリナ, 増田建
- Organizer
  第89回日本植物学会
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] Functional Analysis of RLF, a Cytochrome b 5- Like Heme Binding Protein, in Plant Organ Development2023
- Author(s)
  Kentaro Iwata, Chieko Goto, Hinatamaru Fukumura, Takayuki Shimizu, Kaisei Maruyama, Tomoyuki Furuya, Yuki Kondo, Hiroyuki Kasahara, Tatsuru Masuda, Kimitsune Ishizaki, Hidehiro Fukaki
- Organizer
  The 33rd International Conference on Arabidopsis Research
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] Light mediates transcription start sites of heme oxygenase 1 for a cytoplasmic heme decomposition bypass in Arabidopsis2023
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Yoshito Oka, Tomonao Matsushita, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] Cytoplasmic Heme Decomposition by HO1 Regulated by TSSs is Critical for Chloroplast Biogenesis2023
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Yoshito Oka, Tomonao Matsushita, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第88回日本植物学会
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] 植物の器官発生におけるシトクロムb5様ヘム結合タンパク質RLFの機能解析2023
- Author(s)
  岩田健太郎、後藤千恵子、福村日向丸、清水隆之、丸山海成、古谷朋之、近藤侑貴、笠原博幸、増田建、石崎公庸、深城英弘
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Enhancement of accumulation of photosynthetic pigments and proteins during chloroplast biogenesis by sulfide in Arabidopsis thaliana2023
- Author(s)
  Zurina Osuman, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Light mediates transcription start sites of heme oxygenase 1 for a cytoplasmic heme decomposition bypass in Arabidopsis2023
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Yoshito Oka, Tomonao Matsushita, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 硫化水素依存的光合成の転写制御に関わるポリスルフィド代謝の解析2023
- Author(s)
  清水隆之、井田智章、Giuliano T. Antelo、井原雄太、増田真二、David P. Giedroc、赤池孝章、Daiana A. Capdevila、増田建
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 地上部ヘムシグナルはpre-mRNAスプライシング制御を介して側根形態を制御する2023
- Author(s)
  高柳なつ、荒江星拓、高橋洋和、清水隆之、堀口吾朗、相田光宏、深城英弘、増田建、大谷美沙都
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] 硫化水素依存的光合成の転写制御に関わるポリスルフィド代謝の解析2023
- Author(s)
  清水隆之、井田智章、Giuliano T. Antelo、井原雄太、増田真二、David P. Giedroc、赤池孝章、Daiana A. Capdevila、増田建
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] 地上部ヘムシグナルはpre-mRNAスプライシング制御を介して側根形態を制御する2023
- Author(s)
  高柳なつ、荒江星拓、高橋洋和、清水隆之、堀口吾朗、相田光宏、深城英弘、増田建、大谷美沙都
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Enhancement of accumulation of photosynthetic pigments and proteins during chloroplast biogenesis by sulfide in Arabidopsis thaliana2023
- Author(s)
  Zurina Osuman, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] Role of pre-mRNA splicing in lateral root morphogenesis regulated by plastid signal2023
- Author(s)
  Natsu Takayanagi, Toshihiro Arae, Takayuki Shimizu, Gorou Horiguchi, Mitsuhiro Aida, Hidehiro Fukaki, Tatsuru Masuda, Michitaka Notaguchi, Takashi Hirayama, Misato Ohtani
- Organizer
  The 33rd International Conference on Arabidopsis Research?
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] 紅色光合成細菌の硫化水素応答における超硫黄分子の代謝動態2023
- Author(s)
  清水隆之, 井田智章, Giuliano T. Antelo, 井原雄太, 増田真二, David, P. Giedroc, 赤池孝章, Daiana A. Capdevila, 増田建
- Organizer
  第13回日本光合成学会
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] Light mediates transcription start sites of heme oxygenase 1 for a cytoplasmic heme decomposition bypass in Arabidopsis2023
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Yoshito Oka, Tomonao Matsushita, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] シロイヌナズナの葉緑体形成における硫化水素による光合成器官の制御2023
- Author(s)
  清水隆之, オスマンズリナ, 増田建
- Organizer
  第87回日本植物学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 地上部ヘムシグナルはpre-mRNAスプライシング制御を介して側根形態を制御する2023
- Author(s)
  高柳なつ、荒江星拓、高橋洋和、清水隆之、堀口吾朗、相田光宏、深城英弘、増田建、大谷美沙都
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 紅色光合成細菌の硫化水素応答における超硫黄分子の代謝動態2023
- Author(s)
  清水隆之, 井田智章, Giuliano T. Antelo, 井原雄太, 増田真二, David, P. Giedroc, 赤池孝章, Daiana A. Capdevila, 増田建
- Organizer
  第13回日本光合成学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 植物の光合成活性はpre-mRNAスプライシング制御を介して側根形態に反映される2023
- Author(s)
  高柳なつ, 荒江星拓, 清水隆之, 相田光宏, 深城英弘, 増田建, 大谷美沙都
- Organizer
  第46回分子生物学会
- Data Source
  KAKENHI-PROJECT-23KK0127
[Presentation] 硫化水素依存的光合成の転写制御に関わるポリスルフィド代謝の解析2023
- Author(s)
  清水隆之、井田智章、Giuliano T. Antelo、井原雄太、増田真二、David P. Giedroc、赤池孝章、Daiana A. Capdevila、増田建
- Organizer
  第64回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Development of ionization-coupled cleavage of oxidized polysulfide structure (iCOPS): a novel detection method for oxidized polysulfide modifications on proteins2022
- Author(s)
  Kae Okamura, Takayuki Shimizu, Shingo Kasamatsu, Shinji Masuda, and Hideshi Ihara
- Organizer
  4th International Conference on Persulfide and Sulfur Metabolism in Biology and Medicine
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Reactive sulfur species (RSS) metabolizing enzymes influence RSS sensing by impacting intracellular persulfide dynamics in bacteria2022
- Author(s)
  Takayuki Shimizu
- Organizer
  4th International Conference on Persulfide and Sulfur Metabolism in Biology and Medicine
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] ヘムシグナルによる側根形成制御にはpre-mRNAスプライシング制御が介在する2022
- Author(s)
  高柳なつ、荒江星拓、高橋洋和、清水隆之、堀口吾朗、相田光宏、深城英弘、増田建、大谷美沙都
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 紅色細菌をモデルとした超硫黄分子によるシグナル伝達機構の分子基盤2022
- Author(s)
  清水隆之
- Organizer
  第95回日本生化学会
- Invited
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 紅色光合成細菌におけるファージ様粒子GTAを介した遺伝子水平伝播の酸化ストレス応答性制御機構2022
- Author(s)
  有年統真、清水隆之、増田建
- Organizer
  第63回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Effect of Sulfide on phytochrome-dependent photomorphogenesis in Arabidopsis thaliana2022
- Author(s)
  Zurina Osuman, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] 紅色光合成細菌におけるファージ様粒子GTAを介した遺伝子水平伝播の酸化ストレス応答性制御機構2022
- Author(s)
  有年統真、清水隆之、増田建
- Organizer
  第63回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] シロイヌナズナABCトランスポーターABCG23の機能解析2022
- Author(s)
  増田建、宮地孝明、西村浩二、清水隆之
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Phytochromes mediated transcription start sites of heme oxygenase 1 in Arabidopsis thaliana2022
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Phytochromes mediated transcription start sites of heme oxygenase 1 in Arabidopsis thaliana2022
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] Effect of Sulfide on phytochrome-dependent photomorphogenesis in Arabidopsis thaliana2022
- Author(s)
  Zurina Osuman, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Light regulated transcription start sites of heme oxygenase 1 in Arabidopsis thaliana.2022
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第63回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] ヘムシグナルによる側根形成制御にはpre-mRNAスプライシング制御が介在する2022
- Author(s)
  高柳なつ、荒江星拓、高橋洋和、清水隆之、堀口吾朗、相田光宏、深城英弘、増田建、大谷美沙都
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 紅色光合成細菌における硫化水素応答性転写因子SqrRによるファージ様粒子GTAを介した遺伝子伝播の制御機構2022
- Author(s)
  清水隆之、有年統真、J. Thomas Batty、増田建
- Organizer
  第12回日本光合成学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 紅色光合成細菌における硫化水素応答性転写因子SqrRによるファージ様粒子GTAを介した遺伝子伝播の制御機構2022
- Author(s)
  清水隆之、有年統真、J. Thomas Batty、増田建
- Organizer
  第12回日本光合成学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] ヘムシグナルによる側根形成制御にはpre-mRNAスプライシング制御が介在する2022
- Author(s)
  高柳なつ、荒江星拓、高橋洋和、清水隆之、堀口吾朗、相田光宏、深城英弘、増田建、大谷美沙都
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] Development of ionization-coupled cleavage of oxidized polysulfide structure (iCOPS): a novel detection method for oxidized polysulfide modifications on proteins2022
- Author(s)
  Kae Okamura, Shingo Kasamatsu, Takayuki Shimizu, Shinji Masuda and Hideshi Ihara
- Organizer
  4th International Conference on Persulfide and Sulfur Metabolism in Biology and Medicine
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] Light regulated transcription start sites of heme oxygenase 1 in Arabidopsis thaliana2022
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第63回日本植物生理学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 紅色細菌をモデルとした超硫黄分子によるシグナル伝達機構の分子基盤2022
- Author(s)
  清水隆之
- Organizer
  第95回日本生化学会
- Invited
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] シロイヌナズナABCトランスポーターABCG23の機能解析2022
- Author(s)
  増田建、宮地孝明、西村浩二、清水隆之
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Development of ionization-coupled cleavage of oxidized polysulfide structure (iCOPS): a novel detection method for oxidized polysulfide modifications on proteins2022
- Author(s)
  Kae Okamura, Shingo Kasamatsu, Takayuki Shimizu, Shinji Masuda, Hideshi Ihara
- Organizer
  4th International Conference on Persulfide and Sulfur Metabolism in Biology and Medicine
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 紅色細菌をモデルとした超硫黄分子によるシグナル伝達機構の分子基盤2022
- Author(s)
  清水隆之
- Organizer
  日本生化学会
- Invited
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] Reactive sulfur species (RSS) metabolizing enzymes influence RSS sensing by impacting intracellular persulfide dynamics in bacteria2022
- Author(s)
  Takayuki Shimizu
- Organizer
  4th International Conference on Persulfide and Sulfur Metabolism in Biology and Medicine
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Effect of Sulfide on phytochrome-dependent photomorphogenesis in Arabidopsis thaliana2022
- Author(s)
  Zurina Osuman, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Reactive sulfur species (RSS) metabolizing enzymes influence RSS sensing by impacting intracellular persulfide dynamics in bacteria2022
- Author(s)
  Takayuki Shimizu
- Organizer
  4th International Conference on Persulfide and Sulfur Metabolism in Biology and Medicine
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Phytochromes mediated transcription start sites of heme oxygenase 1 in Arabidopsis thaliana2022
- Author(s)
  Yingxi Chen, Kohji Nishimura, Yoshiharu Yamamoto, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第86回日本植物学会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 紅色光合成細菌における硫化水素応答性転写因子SqrRによるファージ様粒子GTAを介した遺伝子伝播の制御機構2022
- Author(s)
  清水隆之、有年統真、J. Thomas Batty、増田建
- Organizer
  第12回日本光合成学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] Oxidative stress-responsive regulation of phage-like particle GTA-mediated gene transfer in purple photosynthetic bacterium Rhodobacter capsulatus.2022
- Author(s)
  Takayuki Shimizu, Shinji Masuda, Tatsuru Masuda
- Organizer
  第63回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] プラスチドシグナル依存的な側根形成制御におけるpre-mRNAスプライシングの役割2021
- Author(s)
  高柳なつ、荒江星拓、高橋洋和、清水隆之、堀口吾朗、相田光宏、深城英弘、増田建、大谷美沙都
- Organizer
  第85回日本植物学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 硫化水素応答性転写因子SqrRによる酸化ストレスに応答した細菌性ファージ様粒子GTAの制御機構2021
- Author(s)
  有年統真、清水隆之、増田建
- Organizer
  第11回日本光合成学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 紅色細菌における硫化水素・活性イオウ分子種の応答機構2021
- Author(s)
  清水隆之
- Organizer
  第94回日本生化学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素による生理活性調節シグナル伝達機構の解明2021
- Author(s)
  清水隆之、増田真二、増田建
- Organizer
  第85回日本植物学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] Molecular basis of persulfide response involved in sulfide-mediated regulation of physiological activities.2021
- Author(s)
  Takayuki Shimizu, Shinji Masuda, Tatsuru Masuda
- Organizer
  第62回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素による生理活性調節シグナル伝達機構の解明2021
- Author(s)
  清水隆之、増田真二、増田建
- Organizer
  第85回日本植物学会
- Data Source
  KAKENHI-PROJECT-21K15038
[Presentation] 車軸藻類クレブソルミディウムにおけるリン欠乏応答とグルクロノシルジアシルグリセロール合成酵素の解析2021
- Author(s)
  関根伸輔，堀孝一，唐司典明，井原雄太，清水信介，下嶋美惠，太田啓之
- Organizer
  第18回植物脂質シンポジウム
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素による生理活性調節シグナル伝達機構の解明2021
- Author(s)
  清水隆之、増田真二、増田建
- Organizer
  第85回日本植物学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素依存的な生理活性調節におけるパースルフィド応答機構の分子基盤2021
- Author(s)
  清水隆之、増田真二、増田建
- Organizer
  第62回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] 車軸藻類クレブソルミディウムにおけるリン欠乏応答とグルクロノシルジアシルグリセロール合成酵素の解析2021
- Author(s)
  関根伸輔，堀孝一，唐司典明，井原雄太，清水信介，下嶋美惠，太田啓之
- Organizer
  第62回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Biochemical characterization of Arabidopsis ABC transporter that can bind to heme.2021
- Author(s)
  Li Zijing, Takayuki Shimizu, Kohji Nishimura, Tatsuru Masuda
- Organizer
  第62回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Interaction of porphyrins with the loop region of Arabidopsis ABC transporter.2021
- Author(s)
  Li Zijing, Takayuki Shimizu, Tatsuru Masuda
- Organizer
  第62回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 紅色細菌における硫化水素・活性イオウ分子種の応答機構2021
- Author(s)
  清水隆之
- Organizer
  第94回日本生化学会
- Data Source
  KAKENHI-PLANNED-21H05271
[Presentation] 硫化水素による生理活性調節とそのシグナル伝達機構2020
- Author(s)
  清水隆之
- Organizer
  静岡大学招待講演
- Invited
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] 葉緑体形成の制御に関わる葉緑体から核へのシグナル伝達2020
- Author(s)
  清水隆之
- Organizer
  光合成学会オンラインミニシンポジウム
- Invited
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] ゼニゴケにおけるホスファチジン酸ホスホヒドロラーゼ PAH の役割2020
- Author(s)
  下城彩，中村将，北浦銀河，佐々木ー関本結子，清水信介，堀孝一，岩井雅子，太田啓之，石崎公庸，下嶋美恵
- Organizer
  第61回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素による生理活性調節におけるパースルフィド検知機構の分子基盤2020
- Author(s)
  清水隆之、増田真二、増田建
- Organizer
  第61回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] 車軸藻類クレブソルミディウムはリン欠乏時に酸性糖脂質GlcADGとベタイン脂質DGTSを増加させる2020
- Author(s)
  関根伸輔，堀孝一，唐司典明，井原雄太，清水信介，下嶋美恵，太田啓之
- Organizer
  日本植物学会第84回大会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 生きた植物細胞の中で膜内在性タンパク質のトポロジーを評価する新規な蛍光レポーター系の開発に関する研究2020
- Author(s)
  久我一弘, 龍田怜奈, 吉原えりか, 吉田昇平, 清水英寿, 地阪光生, 横田一成, 西村浩二
- Organizer
  日本農芸化学会2020年度大会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] GUN1 regulates tetrapyrrole biosynthesis in Arabidopsis.2019
- Author(s)
  Masuda T, Shimizu T, Mochizuki N, Nagatani A, Watanabe S, Kacprzak S, Okamoto H, Terry MJ
- Organizer
  第60回日本植物生理学会年会．名古屋大学
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Proteomic analysis of heme-binding protein from Arabidopsis thaliana.2019
- Author(s)
  Tatsuru Masuda, Takayuki Shimizu, Tomohiro Shimada, Kan Tanaka, Satoru Watanabe
- Organizer
  第83回日本植物学会年会、仙台
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素依存的な光合成の制御因子SqrRを起点としたパースルフィド代謝経路の解析2019
- Author(s)
  清水隆之、増田建、増田真二
- Organizer
  第10回日本光合成学会
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] 硫化水素による生理活性調節におけるパースルフィド検知機構の分子基盤.2019
- Author(s)
  清水隆之、増田真二、増田建
- Organizer
  第61回日本植物生理学会年会、大阪
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 植物細胞内の酸化的環境に適した蛍光タンパク質の改良2019
- Author(s)
  久我一弘, 龍田怜奈, 礒部淳平, 中川強, 清水英寿, 地阪光生, 横田一成, 西村浩二
- Organizer
  第37回日本植物分子細胞生物学会（京都）大会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] シロイヌナズナ液胞ルーメンタンパク質の液胞輸送配列の機能解析2019
- Author(s)
  高畑周平, 篠﨑悠河, 久我一弘, 清水英寿, 地阪光生, 横田一成, 中川強，西村浩二
- Organizer
  第60回日本植物生理学会年会, 名古屋大学
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] シロイヌナズナフラジェリン受容体のflg22誘導性エンドサイトーシスの分子機構に関する研究2019
- Author(s)
  吉村庄悟, 常愛花, 塚本真嗣, 清水英寿, 地阪光生, 横田一成, 中川強,西村浩二
- Organizer
  日本農芸化学会中四国支部第53回講演会（例会）
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] ナンノクロロプシスのSPX遺伝子のリン欠乏時の機能2019
- Author(s)
  岡崎久美子, 堀孝一, 清水信介, 澤祥平, 野村誠治, 斎藤史彦, 高見明秀, 山本卓, 太田啓之
- Organizer
  第60回日本植物生理学会年会, 名古屋大学
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 硫化水素依存的な光合成の制御因子SqrRを起点としたパースルフィド代謝経路の解析2019
- Author(s)
  清水隆之、増田建、増田真二
- Organizer
  第10回日本光合成学会年会
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] 生理活性物質としての硫化水素のシグナル伝達機構に関与するパースルフィド代謝系の解析2019
- Author(s)
  清水隆之、増田建、増田真二
- Organizer
  第60回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] GUN1 regulates tetrapyrrole biosynthesis in Arabidopsis thaliana.2019
- Author(s)
  Takayuki Shimizu, Nobuyoshi Mochizuki, Akira Nagatani, Satoru Watanabe, Tomohiro Shimada, Kan Tanaka, Yuuki Hayashi, Munehito Arai, Sylwia M. Kacprzak, Dario Leister, Haruko Okamoto, Matthew J. Terry, Tatsuru Masuda
- Organizer
  14th International Conference on Tetrapyrrole Photoreceptors in Photosynthetic Organisms
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Lipid binding property of EPSIN N-TERMINAL HOMOLOGY domain of Arabidopsis MODIFIED TRANSPORT TO THE VACUOLE1 (MTV1)2018
- Author(s)
  Nishimura K, Kuga K, Yoshimura S, Nakagawa T, Shimizu H, Jisaka M, Murota K, Yokota K and Awai K
- Organizer
  The 23rd International Symposium on Plant Lipids
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Persulfide-responsive transcriptional repressor SqrR regulates sulfide-dependent photosynthesis2018
- Author(s)
  Takayuki Shimizu, Jiangchuan Shen, Mingxu Fang, Yixiang Zhang, Koichi Hori, Jonathan C. Trinidad, Carl E. Bauer, David P. Giedroc and Shinji Masuda
- Organizer
  1st Asia-Oceania International Congress on Photosynthesis
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] Biochemical characterization of GUN1 in Arabidopsis.2018
- Author(s)
  Shimizu T, Mochizuki N, Watanabe S, Shimada T, Tanaka K, Hayashi Y, Arai M, Masuda T
- Organizer
  Conference Jacque-Monod: Retrograde signalling from endosymbiotic organelles. France.
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H03941
[Presentation] Persulfide-responsive transcriptional repressor SqrR regulates sulfide-dependent photosynthesis2018
- Author(s)
  Takayuki Shimizu, Jiangchuan Shen, Mingxu Fang, Yixiang Zhang, Koichi Hori, Jonathan C. Trinidad, Carl E. Bauer, David P. Giedroc and Shinji Masuda
- Organizer
  18th International Symposium of Phototrophic Prokaryotes
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] 硫化水素依存的な光合成の制御因子SqrRはヘム応答性転写因子として機能する2018
- Author(s)
  清水隆之、増田建、増田真二
- Organizer
  第9回日本光合成学会
- Data Source
  KAKENHI-PROJECT-18K14650
[Presentation] Tetrapyrrole-binding properties of GUN1 in Arabidopsis.2018
- Author(s)
  Shimizu T, Shimada T, Tanaka K, Mochizuki N, Watanabe S, Masuda T
- Organizer
  Gordon Research Conference: Chemistry and Biology of Tetrapyrroles. USA.
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H03941

1. Ohta Hiroyuki (20233140)

# of Collaborated Projects: 1 results

# of Collaborated Products: 6 results
2. 増田建 (00242305)

# of Collaborated Projects: 1 results

# of Collaborated Products: 26 results
3. 西村浩二 (30304257)

# of Collaborated Projects: 1 results

# of Collaborated Products: 10 results
4. 小林康一 (40587945)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 堀孝一 (70453967)

# of Collaborated Projects: 1 results

# of Collaborated Products: 8 results
6. 粟井光一郎 (80431732)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
7. 下嶋美恵 (90401562)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
8. 増田真二 (30373369)

# of Collaborated Projects: 1 results

# of Collaborated Products: 22 results
9. CATTI LORENZO (50873478)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 赤池孝章

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
11. 林勇樹

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
12. 笠松真吾

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
13. 田中寛

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Shimizu Takayuki 清水 隆之

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超硫黄分子輸送体の機能解析による生理機能制御システムの解明Principal Investigator

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環状化硫黄S8による超硫黄分子シグナル伝達の制御機構Principal Investigator

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Molecular basis of signaling mechanisms via protein polysulfidationPrincipal Investigator

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硫化水素によるシグナル伝達

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Molecular analysis of persulfide dependent signaling involved in bioactive regulationPrincipal Investigator

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Molecular basis

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[Journal Article] Thioredoxin-2 Regulates SqrR-Mediated Polysulfide-Responsive Transcription via Reduction of a Polysulfide Link in SqrR2023

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[Journal Article] Polysulfide metabolizing enzymes influence SqrR-mediated sulfide-induced transcription by impacting intracellular polysulfide dynamics2023

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[Journal Article] Translation Enhancement by a Short Nucleotide Insertion at 5′UTR: Application to an In Vitro Cell-Free System and a Photosynthetic Bacterium2023

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[Journal Article] Persulfide-Responsive Transcription Factor SqrR Regulates Gene Transfer and Biofilm Formation via the Metabolic Modulation of Cyclic di-GMP in Rhodobacter capsulatus2022

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[Journal Article] The Sulfide-Responsive SqrR/BigR Homologous Regulator YgaV of Escherichia coli Controls Expression of Anaerobic Respiratory Genes and Antibiotic Tolerance2022

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[Journal Article] The Role of Tetrapyrrole- and GUN1-Dependent Signaling on Chloroplast Biogenesis2021

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[Journal Article] Repressor Activity of SqrR, a Master Regulator of Persulfide-Responsive Genes, Is Regulated by Heme Coordination2021

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[Journal Article] Proteomic analysis of haem-binding protein from Arabidopsis thaliana and Cyanidioschyzon merolae2020

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Shimizu Takayuki 清水隆之

[Presentation] 紅色光合成細菌をモデルとした超硫黄分子シグナル制御システムの解析2024

[Presentation] 紅色光合成細菌をモデルとした超硫黄分子シグナル制御システムの解析2024