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Nikaido Itoshi  二階堂 愛

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… Alternative Names

NIKAIDO Itoshi  二階堂 愛

二階堂 愛  ニカイドウ イトシ

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Researcher Number 00383290
Other IDs
Affiliation (Current) 2020: 東京医科歯科大学, 難治疾患研究所, 教授
2020: 国立研究開発法人理化学研究所, 生命機能科学研究センター, チームリーダー
Affiliation (based on the past Project Information) *help 2019: 国立研究開発法人理化学研究所, 生命機能科学研究センター, チームリーダー
2017 – 2018: 国立研究開発法人理化学研究所, 生命機能科学研究センター, ユニットリーダー
2016: 独立行政法人理化学研究所, 情報基盤センター, ユニットリーダー
2015: 国立研究開発法人理化学研究所, 情報基盤センター, ユニットリーダー
2013 – 2014: 独立行政法人理化学研究所, 情報基盤センター, ユニットリーダー
2004: 埼玉医科大学, 医学部, 研究員
Review Section/Research Field
Principal Investigator
System genome science
Except Principal Investigator
Biological Sciences / Genome biology / Medium-sized Section 53:Organ-based internal medicine and related fields / Life / Health / Medical informatics / Biomedical engineering/Biomaterial science and engineering
Keywords
Principal Investigator
バイオインフォマティクス
Except Principal Investigator
ゲノム / 脂質 / 遺伝学 / 遺伝子 / マイクロアレイ / クロマチン / ヌクレオソーム / SEVENS法 / 転写 … More / プロモーター / CYP19 / 次世代シーケンサー / セントロメア / ヒストン修飾 / オミックス解析 / 肝胆膵がん / 免疫 / RNA / プロテオーム / ゲノム解析 / 多層オミックス / 腫瘍免疫 / がんゲノム / beta cell / single cell analysis / hiPS / single cell / β細胞 / hiPSダブルノックイン Less
  • Research Projects

    (5 results)
  • Research Products

    (8 results)
  • Co-Researchers

    (19 People)
  •  Multi-omics analysis for hepato-biliary-pancreatic cancersOngoing

    • Principal Investigator
      中川 英刀
    • Project Period (FY)
      2018 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 53:Organ-based internal medicine and related fields
    • Research Institution
      Institute of Physical and Chemical Research
  •  Development and finding the mechanism of pancreatic beta cell differentiation from hiPS cells through Single cell analysis

    • Principal Investigator
      Sugahara Izumi
    • Project Period (FY)
      2015 – 2017
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Life / Health / Medical informatics
      Biomedical engineering/Biomaterial science and engineering
    • Research Institution
      National Center for Global Health and Medicine
      Saitama Medical University
  •  Chromatin structure as a determinant of transcriptional activity

    • Principal Investigator
      Ishihara Satoru
    • Project Period (FY)
      2014 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Genome biology
    • Research Institution
      Fujita Health University
  •  Model of mRNA transcription and transcriptional factor bindingPrincipal Investigator

    • Principal Investigator
      NIKAIDO Itoshi
    • Project Period (FY)
      2013 – 2015
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      System genome science
    • Research Institution
      Institute of Physical and Chemical Research
  •  遺伝学とトランスクリプトームの統合による高脂血症の遺伝子ネットワークの解明

    • Principal Investigator
      Okazaki Yasushi
    • Project Period (FY)
      2004
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      Saitama Medical University

All 2016 2014 2013 2004 Other

All Journal Article Presentation Book

  • [Book] 次世代シークエンス解析スタンダード〜NGSのポテンシャルを活かしきるWET&DRY2014

    • Author(s)
      二階堂愛
    • Total Pages
      404
    • Publisher
      羊土社
    • Data Source
      KAKENHI-PROJECT-25830148
  • [Book] NGSによる転写制御ネットワークのモデリング. 実験医学2013

    • Author(s)
      二階堂愛
    • Total Pages
      4
    • Publisher
      羊土社
    • Data Source
      KAKENHI-PROJECT-25830148
  • [Book] 次世代シーケンサーのその先に -シーケンス技術の現在と未来を考える- 細胞工学2013

    • Author(s)
      二階堂愛
    • Total Pages
      2
    • Publisher
      学研メディカル秀潤社
    • Data Source
      KAKENHI-PROJECT-25830148
  • [Journal Article] Context-Dependent Wiring of Sox2 Regulatory Networks for Self-Renewal of Embryonic and Trophoblast Stem Cells. Molecular Cell. 2013.2013

    • Author(s)
      Adachi K, Nikaido I, Ohta H, Ohtsuka S, Ura H, Kadota M, Wakayama T, Ueda HR, Niwa H.
    • Journal Title

      Mol Cell.

      Volume: 52 Pages: 380-392

    • DOI

      10.1016/j.molcel.2013.09.002

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-12J09944, KAKENHI-PLANNED-21116005, KAKENHI-PLANNED-23115006, KAKENHI-PROJECT-23248048, KAKENHI-PROJECT-25830148
  • [Journal Article] EICO (Expression-based Imprint Candidate Organizer) : finding disease-related imprinted genes2004

    • Author(s)
      Nikaido I.
    • Journal Title

      Nucleic Acids Research 32

      Pages: 548-551

    • Data Source
      KAKENHI-PROJECT-16012256
  • [Presentation] BioDevOpsによる再現性のあるDNAシーケンス解析環境の構築2016

    • Author(s)
      二階堂愛
    • Organizer
      NPO並列生物情報処理イニシアティブシンポジウム
    • Place of Presentation
      東京工業大学 (東京都)
    • Year and Date
      2016-03-11
    • Invited
    • Data Source
      KAKENHI-PROJECT-25830148
  • [Presentation] 生命科学研究を加速するためのAIを計測と計算の融合から考える2016

    • Author(s)
      二階堂愛
    • Organizer
      第2回 理研・産総研共同シンポジウム
    • Place of Presentation
      産業技術研究所 (茨城県・つくば市)
    • Year and Date
      2016-02-02
    • Invited
    • Data Source
      KAKENHI-PROJECT-25830148
  • [Presentation] Estimation of transcriptional activity from ChIP-Seq and transcriptome

    • Author(s)
      Itoshi Nikaido
    • Organizer
      Computational Science in Epigenetics
    • Place of Presentation
      Kobe, Hyogo, Japan
    • Year and Date
      2015-02-13 – 2015-02-14
    • Invited
    • Data Source
      KAKENHI-PROJECT-25830148
  • 1.  Okazaki Yasushi (80280733)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 2.  Ishihara Satoru (00300723)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 3.  SASAGAWA YOHEI (10404344)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 4.  Sugahara Izumi (10633000)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 5.  Matsumoto Masahito (90321819)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 6.  Nakachi Yutaka (10522097)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 7.  Watanabe Ami (40611421)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 8.  坊農 秀雅 (20364789)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  八木 研 (60323482)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  石原 直恵 (50571791)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  原田 信広 (00189705)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 12.  中川 英刀 (50361621)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 13.  井元 清哉 (10345027)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 14.  山上 裕機 (20191190)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  相方 浩 (30403512)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 16.  中村 透 (70645796)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 17.  丹羽 仁史
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 18.  上田 泰己
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 19.  若山 照彦
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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