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Awadu Akinori  粟津 暁紀

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AWAZU Akinori  粟津 暁紀

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Researcher Number 00448234
Other IDs
Affiliation (Current) 2025: 広島大学, 統合生命科学研究科(理), 准教授
Affiliation (based on the past Project Information) *help 2019 – 2024: 広島大学, 統合生命科学研究科(理), 准教授
2016 – 2018: 広島大学, 理学研究科, 准教授
2012 – 2015: 広島大学, 理学(系)研究科(研究院), 准教授
2012: 広島大学
2011 – 2012: 広島大学, 大学院・理学研究科, 准教授
2007 – 2010: Hiroshima University, 大学院・理学研究科, 助教
Review Section/Research Field
Principal Investigator
Biological Sciences / Basic Section 42020:Veterinary medical science-related / Basic Section 43050:Genome biology-related / Biological physics/Chemical physics/Soft matter physics / Complex systems / Biophysics/Chemical physics
Except Principal Investigator
Basic Section 43050:Genome biology-related / Basic Section 43040:Biophysics-related / Mathematical physics/Fundamental condensed matter physics / Basic Section 13040:Biophysics, chemical physics and soft matter physics-related / Medium-sized Section 43:Biology at molecular to cellular levels, and related fields / Biological physics/Chemical physics/Soft matter physics / Constructive Systems Biology
Keywords
Principal Investigator
染色体動態 / イエネコ / 数理モデル / 遺伝子発現揺らぎ / 分子少数性 / ゲノム編集 / NGS解析 / 疾患 / White locus / ライブ観察 … More / DNA二本鎖切断修復 / 核小体 / X染色体対合形成 / CTCF / 核スペックル / ウニ / 遺伝子制御 / 核内構造体 / エピゲノム / ゲノム構造・動態 / 細胞核内動態 / 生物物理 / ウニ初期胚細胞核内構造 / 分裂酵母染色体モデル / 発生・分化 / クロマチン構造 / 分裂酵母染色体 / 再構成 / ヌクレオソーム / クロマチン / In silico 解析 / インスレーター / 転写制御 / 染色体粗視化モデル / 遺伝子発現制御 / DNA動態 / データ解析 / ストレス応答 / 揺らぎと応答 / 遺伝子揺らぎ / 環境応答 / シグナル伝達系 / 排除体積効果 / 時系列データ解析 / 非平衡高分子系 / ネットワーク / 化学反応 / FFLCA / ガラス転移 / 自己組織化臨界現象 / エネルギー論 / 分子の少数性 / 化学反応ネットワーク / 代謝系 / 反応ネットワーク / 緩和 / 触媒反応ネットワーク … More
Except Principal Investigator
インスレーター / 数理モデル / 集団運動 / 集団行動 / 自己駆動系 / 社会性昆虫 / GPCR / オリゴマー / クラスター / ロドプシン / シグナル伝達 / 自己組織化 / ゲノム / 棘皮動物 / mathematical model / collective behavior / self-propelled objects / ants / 意思決定 / 分裂酵母 / 電子顕微鏡 / 核内クロマチン構造 / 1分子動態 / バイオイメージング / 高速原子間力顕微鏡 / 光受容体 / CRISPR-Cas9 / ゲノム編集 / 揺らぎ / エンハンサー遮断活性 / 弾性 / ねじれ / DNA / 計算物理 / 生体生命情報学 / 統計力学 / 生物物理 / 群知能 / 分業 / アリ集団 / 非線形ダイナミクス / 化学走性 / 群のダイナミクス / ダイナミクス / 2次元秩序構造 / 擬結晶 / 光シグナル伝達 / 粗視化モデル / 高速AFM / 人工膜 / ラフト / 受容体 / 超分子クラスター / 膜ドメイン / 膜タンパク質 / 生体膜 / 自己組織化現象 / 非線形現象 / 物理化学 / 非線形科学 / 自律運動 / 樟脳ボート / アリ / ゆらぎ / 自己駆動粒子系 / 非一様ノイズ / 確率共鳴 / 砂丘のダイナミクス / 生物対流 / 樟脳舟の集団運動 / アリの集団採餌 Less
  • Research Projects

    (17 results)
  • Research Products

    (194 results)
  • Co-Researchers

    (18 People)
  •  Comprehensive exploration of the function of the domestic cat white gene and its influence on diseases using molecular cell biology and mathematicsPrincipal Investigator

    • Principal Investigator
      粟津 暁紀
    • Project Period (FY)
      2024 – 2026
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 42020:Veterinary medical science-related
    • Research Institution
      Hiroshima University
  •  Insulator-mediated genome organization and evolution in echinoderm.

    • Principal Investigator
      坂本 尚昭
    • Project Period (FY)
      2024 – 2026
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43050:Genome biology-related
    • Research Institution
      Hiroshima University
  •  Mathematical study of transcriptional control by nuclear structures with non-coding DNAPrincipal Investigator

    • Principal Investigator
      Awazu Akinori
    • Project Period (FY)
      2021 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43050:Genome biology-related
    • Research Institution
      Hiroshima University
  •  3D analysis of chromatin structure in cell nucleus with electron microscopy and mathematical modeling

    • Principal Investigator
      楯 真一
    • Project Period (FY)
      2021 – 2024
    • Research Category
      Grant-in-Aid for Challenging Research (Pioneering)
    • Review Section
      Medium-sized Section 43:Biology at molecular to cellular levels, and related fields
    • Research Institution
      Hiroshima University
  •  Analysis of insulator function of non-coding DNA using genome editing

    • Principal Investigator
      Naoaki Sakamoto
    • Project Period (FY)
      2020 – 2022
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43050:Genome biology-related
    • Research Institution
      Hiroshima University
  •  Supramolecular structure of photoreceptor proteins and the dynamic molecular mechanism on signal transduction

    • Principal Investigator
      YAMASHITA Hayato
    • Project Period (FY)
      2020 – 2022
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 43040:Biophysics-related
    • Research Institution
      Osaka University
  •  社会性昆虫に学ぶ柔軟で頑健な組織づくりと機能発現の実験的および理論的研究

    • Principal Investigator
      西森 拓
    • Project Period (FY)
      2020 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 13040:Biophysics, chemical physics and soft matter physics-related
    • Research Institution
      Meiji University
  •  Verification of Elastic Regulated Insulator Function by Measuring the Torsional Response of Single DNA Molecule

    • Principal Investigator
      Murayama Yoshihiro
    • Project Period (FY)
      2018 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43040:Biophysics-related
    • Research Institution
      Tokyo University of Agriculture and Technology
  •  Two dimensional self-assembly of photoreceptor proteins

    • Principal Investigator
      Morigaki Kenichi
    • Project Period (FY)
      2017 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Constructive Systems Biology
    • Research Institution
      Kobe University
  •  Chromatin dynamics with intranuclear long range interasctioonsPrincipal Investigator

    • Principal Investigator
      Awazu Akinori
    • Project Period (FY)
      2017 – 2019
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Biological physics/Chemical physics/Soft matter physics
    • Research Institution
      Hiroshima University
  •  Integrated Study from Experiment, Theory and Data Analysis on Emerging Mechanism of Collective Functions by Social Insects

    • Principal Investigator
      Nishimori Hiraku
    • Project Period (FY)
      2016 – 2019
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Biological physics/Chemical physics/Soft matter physics
    • Research Institution
      Hiroshima University
  •  遺伝子発現の力学的・回路的制御機構の実験・シミュレーションデータ駆動型研究Principal Investigator

    • Principal Investigator
      粟津 暁紀
    • Project Period (FY)
      2014 – 2015
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Complex systems
    • Research Institution
      Hiroshima University
  •  植物の代謝・シグナル伝達における植物ホルモン間クロストークの数理モデル化Principal Investigator

    • Principal Investigator
      粟津 暁紀
    • Project Period (FY)
      2013 – 2014
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      Hiroshima University
  •  細胞内反応場の実効的分子数の少数性と状態・機能最適化の統計力学的研究Principal Investigator

    • Principal Investigator
      粟津 暁紀
    • Project Period (FY)
      2012 – 2013
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      Hiroshima University
  •  Collective motion of self-propelled particles

    • Principal Investigator
      SUEMATSU Nobuhiko
    • Project Period (FY)
      2011 – 2012
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Mathematical physics/Fundamental condensed matter physics
    • Research Institution
      Meiji University
  •  Dynamics and Functions of Diverse Multi-Element Systems Accompanied by Fluctuation

    • Principal Investigator
      NISHIMORI Hiraku
    • Project Period (FY)
      2010 – 2012
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Mathematical physics/Fundamental condensed matter physics
    • Research Institution
      Hiroshima University
  •  Study of biological functions through formulation of the response theory of reaction network systemPrincipal Investigator

    • Principal Investigator
      AWAZU Akinori
    • Project Period (FY)
      2007 – 2010
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Biophysics/Chemical physics
    • Research Institution
      Hiroshima University

All 2023 2022 2021 2020 2019 2018 2017 2016 2015 2014 2013 2012 2011 2010 2009 2008 2007 Other

All Journal Article Presentation

  • [Journal Article] Formation of Small-World Network Containing Module Networks in Globally and Locally Coupled Map System with Changes in Global Connection with Time Delay Effects2023

    • Author(s)
      Nakanishi Taito、Awazu Akinori
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 92 Issue: 3 Pages: 034801-034801

    • DOI

      10.7566/jpsj.92.034801

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-21K18234
  • [Journal Article] Possibilities of skin coat color‐dependent risks and risk factors of squamous cell carcinoma and deafness of domestic cats inferred via RNA‐seq data2023

    • Author(s)
      Awazu Akinori、Takemoto Daigo、Watanabe Kaichi、Sakamoto Naoaki
    • Journal Title

      Genes to Cells

      Volume: 28 Issue: 12 Pages: 893-905

    • DOI

      10.1111/gtc.13076

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-21K06124
  • [Journal Article] Mathematical model of structural changes in nuclear speckle2023

    • Author(s)
      Wakao, S., Saitoh, N., Awazu, A.
    • Journal Title

      Biophysics and Physicobiology

      Volume: 20 Issue: 2 Pages: n/a

    • DOI

      10.2142/biophysico.bppb-v20.0020

    • ISSN
      2189-4779
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H03520, KAKENHI-PLANNED-18H05531, KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-22K19466, KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-23H00411
  • [Journal Article] The crucial role of CTCF in mitotic progression during early development of sea urchin2023

    • Author(s)
      Watanabe Kaichi、Fujita Megumi、Okamoto Kazuko、Yoshioka Hajime、Moriwaki Miki、Tagashira Hideki、Awazu Akinori、Yamamoto Takashi、Sakamoto Naoaki
    • Journal Title

      Development, Growth and Differentiation

      Volume: 65 Issue: 7 Pages: 395-407

    • DOI

      10.1111/dgd.12875

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-21K06124
  • [Journal Article] Mathematical model of chromosomal dynamics during DNA double strand break repair in budding yeast2022

    • Author(s)
      Nakahata Shinjiro、Komoto Tetsushi、Fujii Masashi、Awazu Akinori
    • Journal Title

      Biophysics and Physicobiology

      Volume: 19 Issue: 0 Pages: n/a

    • DOI

      10.2142/biophysico.bppb-v19.0012

    • ISSN
      2189-4779
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-19K20382
  • [Journal Article] Ribosomal protein L5 facilitates rDNA-bundled condensate and nucleolar assembly2022

    • Author(s)
      Matsumori Haruka、Watanabe Kenji、Tachiwana Hiroaki、Fujita Tomoko、Ito Yuma、Tokunaga Makio、Sakata-Sogawa Kumiko、Osakada Hiroko、Haraguchi Tokuko、Awazu Akinori、Ochiai Hiroshi、Sakata Yuka、Ochiai Koji、Toki Tsutomu、Ito Etsuro、Goldberg Ilya G、Tokunaga Kazuaki、Nakao Mitsuyoshi、Saitoh Noriko
    • Journal Title

      Life Science Alliance

      Volume: 5 Issue: 7 Pages: 1-18

    • DOI

      10.26508/lsa.202101045

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K06612, KAKENHI-PROJECT-20K15755, KAKENHI-PLANNED-18H05528, KAKENHI-PUBLICLY-21H05753, KAKENHI-PROJECT-19H03192, KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-20H03520, KAKENHI-PROJECT-21H02686, KAKENHI-PROJECT-20K07578, KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-20KK0185, KAKENHI-PLANNED-18H05531, KAKENHI-PROJECT-23K21429, KAKENHI-PROJECT-23K23845
  • [Journal Article] Partial exogastrulation due to apical-basal polarity of F‐actin distribution disruption in sea urchin embryo by omeprazole2022

    • Author(s)
      Watanabe Kaichi、Yasui Yuhei、Kurose Yuta、Fujii Masashi、Yamamoto Takashi、Sakamoto Naoaki、Awazu Akinori
    • Journal Title

      Genes to Cells

      Volume: - Issue: 6 Pages: 1-17

    • DOI

      10.1111/gtc.12934

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-20K06602
  • [Journal Article] Ants Alter Collective Behavior After Feeding and Generate Shortcut Paths on a Two-Dimensional Foraging Area2022

    • Author(s)
      Yamanaka Osamu、Oki Yusuke、Imamura Yuta、Tamura Yukari、Shiraishi Masashi、Izumi Shunsuke、Awazu Akinori、Nishimori Hiraku
    • Journal Title

      Frontiers in Physics

      Volume: 10 Pages: 896717-896717

    • DOI

      10.3389/fphy.2022.896717

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22K17971, KAKENHI-ORGANIZER-21H05293, KAKENHI-PLANNED-21H05297, KAKENHI-PROJECT-20H01871
  • [Journal Article] Epigenetic-structural changes in X chromosomes promote Xic pairing during early differentiation of mouse embryonic stem cells2022

    • Author(s)
      Komoto Tetsushi、Fujii Masashi、Awazu Akinori
    • Journal Title

      Biophysics and Physicobiology

      Volume: 19 Issue: 0 Pages: n/a

    • DOI

      10.2142/biophysico.bppb-v19.0018

    • ISSN
      2189-4779
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-19K20382
  • [Journal Article] Molecular dynamics analysis of biomolecular systems including nucleic acids2022

    • Author(s)
      Kameda Takeru、Awazu Akinori、Togashi Yuichi
    • Journal Title

      Biophysics and Physicobiology

      Volume: 19 Issue: 0 Pages: n/a

    • DOI

      10.2142/biophysico.bppb-v19.0027

    • ISSN
      2189-4779
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-18KK0388
  • [Journal Article] Identification of aberrant transcription termination at specific gene loci with DNA hypomethylated transcription termination sites caused by DNA methyltransferase deficiency2022

    • Author(s)
      Masaki Shirai, Takuya Nara, Haruko Takahashi, Kazuya Takayama, Yuan Chen, Yudai Hirose, Masashi Fujii, Akinori Awazu, Nobuyoshi Shimoda, and Yutaka Kikuchi
    • Journal Title

      Genes Genet. Syst.

      Volume: 97 Issue: 3 Pages: 139-152

    • DOI

      10.1266/ggs.21-00092

    • ISSN
      1341-7568, 1880-5779
    • Year and Date
      2022-06-01
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21K06123, KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-19K20382
  • [Journal Article] Self-Organization of Diverse Directional Hierarchical Networks in Simple Coupled Maps with Connection Changes2022

    • Author(s)
      Nakanishi Taito、Fujii Masashi、Awazu Akinori
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 91 Issue: 2 Pages: 023801-023801

    • DOI

      10.7566/jpsj.91.023801

    • NAID

      210000159588

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-21K06124, KAKENHI-PROJECT-21K18234, KAKENHI-PROJECT-19K20382
  • [Journal Article] Structural dynamics of DNA depending on methylation pattern2021

    • Author(s)
      Takeru Kameda, Miho M. Suzuki, Akinori Awazu, Yuichi Togashi
    • Journal Title

      Physical Review E

      Volume: 103 Issue: 1

    • DOI

      10.1103/physreve.103.012404

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18KK0388, KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-18K06149
  • [Journal Article] Affinity of rhodopsin to raft enables the aligned oligomer formation from dimers: Coarse-grained molecular dynamics simulation of disk membranes2020

    • Author(s)
      Kaneshige Y, Hayashi F, Morigaki K, Tanimoto Y, Yamashita H, Fuji M, Awazu A.
    • Journal Title

      PLoS One

      Volume: 15 Issue: 2 Pages: e0226123-e0226123

    • DOI

      10.1371/journal.pone.0226123

    • NAID

      120006818744

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-19K20382, KAKENHI-PUBLICLY-19H04725, KAKENHI-PROJECT-16H04035, KAKENHI-PROJECT-17H03666, KAKENHI-PROJECT-17K05614
  • [Journal Article] Simple Particle Model for Low-Density Granular Flow Interacting with Ambient Fluid2020

    • Author(s)
      Hirofumi Niiya, Akinori Awazu, Hiraku Nishimori
    • Journal Title

      Geosciences

      Volume: 10 Issue: 2 Pages: 69-69

    • DOI

      10.3390/geosciences10020069

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-16H04035, KAKENHI-PROJECT-17K14353
  • [Journal Article] Spontaneous Organizations of Diverse Network Structures in Coupled Logistic Maps with a Delayed Connection Change2020

    • Author(s)
      A. Ohara, M. Fujii, A. Awazu
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 89 Issue: 11 Pages: 114801-114801

    • DOI

      10.7566/jpsj.89.114801

    • NAID

      210000158610

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-18K06149
  • [Journal Article] Ultrasensitive Change in Nucleosome Binding by Multiple Phosphorylations to the Intrinsically Disordered Region of the Histone Chaperone FACT2020

    • Author(s)
      D. Aoki, A. Awazu, M. Fujii, J. Uewaki, M. Hashimoto, N. Tochio, T. Umehara, S. Tate
    • Journal Title

      Journal of Molecular Biology

      Volume: 432 Issue: 16 Pages: 4637-4657

    • DOI

      10.1016/j.jmb.2020.06.011

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-19H03168, KAKENHI-PROJECT-20H03223, KAKENHI-PROJECT-20H03388
  • [Journal Article] Diverse stochasticity leads a colony of ants to optimal foraging2019

    • Author(s)
      Shiraishi Masashi、Takeuchi Rito、Nakagawa Hiroyuki、Nishimura Shin I、Awazu Akinori、Nishimori Hiraku
    • Journal Title

      Journal of Theoretical Biology

      Volume: 465 Pages: 7-16

    • DOI

      10.1016/j.jtbi.2019.01.002

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Journal Article] Verification of mathematical models of response threshold through statistical characterisation of the foraging activity in ant societies2019

    • Author(s)
      Yamanaka Osamu、Shiraishi Masashi、Awazu Akinori、Nishimori Hiraku
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 1-8

    • DOI

      10.1038/s41598-019-45367-w

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Journal Article] Torsional Turning Motion of Chromosomes as an Accelerating Force to Align Homologous Chromosomes during Meiosis2019

    • Author(s)
      Takao Kazutaka、Takamiya Kazunori、Ding Da-Qiao、Haraguchi Tokuko、Hiraoka Yasushi、Nishimori Hiraku、Awazu Akinori
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 88 Issue: 2 Pages: 023801-023801

    • DOI

      10.7566/jpsj.88.023801

    • NAID

      210000135084

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-17K05614, KAKENHI-PROJECT-18K06149, KAKENHI-PLANNED-18H05533, KAKENHI-PROJECT-17H01444, KAKENHI-PLANNED-18H05528
  • [Journal Article] Establishment of knockout adult sea urchins by using a CRISPR‐Cas9 system2019

    • Author(s)
      Daming Liu, Akinori Awazu, Tetsushi Sakuma, Takashi Yamamoto, Naoaki Sakamoto
    • Journal Title

      Development Growth and Regeneration

      Volume: 61 Issue: 6 Pages: 378-388

    • DOI

      10.1111/dgd.12624

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-19K16111, KAKENHI-PROJECT-16H04035, KAKENHI-PROJECT-17K05614, KAKENHI-PROJECT-17K07241
  • [Journal Article] Histone Tail Dynamics in Partially Disassembled Nucleosomes During Chromatin Remodeling2019

    • Author(s)
      Takeru Kameda, Akinori Awazu, Yuichi Togashi
    • Journal Title

      Front. Mol. Biosci.

      Volume: 6 Pages: 133-133

    • DOI

      10.3389/fmolb.2019.00133

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-18K06149, KAKENHI-PUBLICLY-18H04720, KAKENHI-PROJECT-16H04035, KAKENHI-PROJECT-17K05614
  • [Journal Article] Insulator Activities of Nucleosome-Excluding DNA Sequences without Bound Chromatin Looping Proteins2019

    • Author(s)
      Matsushima Yuki、Sakamoto Naoaki、Awazu Akinori
    • Journal Title

      The Journal of Physical Chemistry B

      Volume: 123 Issue: 5 Pages: 1035-1043

    • DOI

      10.1021/acs.jpcb.8b10518

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-17K05614, KAKENHI-PROJECT-17K07241, KAKENHI-PROJECT-18K06149
  • [Journal Article] Reciprocating Motion of a Self-Propelled Rotor Induced by Forced Halt and Release Operations2018

    • Author(s)
      Nakata Satoshi、Kayahara Katsuhiko、Yamamoto Hiroya、Skrobanska Paulina、Gorecki Jerzy、Awazu Akinori、Nishimori Hiraku、Kitahata Hiroyuki
    • Journal Title

      The Journal of Physical Chemistry C

      Volume: 122 Issue: 6 Pages: 3482-3487

    • DOI

      10.1021/acs.jpcc.7b12089

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17KT0123, KAKENHI-PLANNED-25103008, KAKENHI-PROJECT-26247015, KAKENHI-PROJECT-16H03949, KAKENHI-PROJECT-15K05199, KAKENHI-PROJECT-16H04035
  • [Journal Article] Broad distribution spectrum from Gaussian to power law appears in stochastic variations in RNA-seq data2018

    • Author(s)
      Awazu Akinori、Tanabe Takahiro、Kamitani Mari、Tezuka Ayumi、Nagano Atsushi J.
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 1-8

    • DOI

      10.1038/s41598-018-26735-4

    • NAID

      130007736435

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-17K05614, KAKENHI-PROJECT-16H06171
  • [Journal Article] Perspective for Understanding Switching of Primarily Usage of Localization Information in Foraging Ants2017

    • Author(s)
      山中 治、粟津 暁紀、西森 拓
    • Journal Title

      Journal of the Robotics Society of Japan

      Volume: 35 Issue: 6 Pages: 444-447

    • DOI

      10.7210/jrsj.35.444

    • NAID

      130005973788

    • ISSN
      0289-1824, 1884-7145
    • Language
      Japanese
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Journal Article] Dynamic changes in the interchromosomal interaction of early histone gene loci during development of sea urchin2017

    • Author(s)
      Matsushita Masaya、Ochiai Hiroshi、Suzuki Ken-ichi T.、Hayashi Sayaka、Yamamoto Takashi、Awazu Akinori、Sakamoto Naoaki
    • Journal Title

      Journal of Cell Science

      Volume: 130 Issue: 24 Pages: 4097-4107

    • DOI

      10.1242/jcs.206862

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17KT0024, KAKENHI-PROJECT-17K05614, KAKENHI-PROJECT-17K07241
  • [Journal Article] The Flux of Euglena gracilis Cells Depends on the Gradient of Light Intensity2016

    • Author(s)
      T. Ogawa, E. Shoji, N. J. Suematsu, H. Nishimori, S. Izumi, A. Awazu and M. Iima
    • Journal Title

      PLoS ONE

      Volume: 11 Issue: 12 Pages: e0168114-e0168114

    • DOI

      10.1371/journal.pone.0168114

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H03949, KAKENHI-PROJECT-26310209, KAKENHI-PROJECT-26400396, KAKENHI-PROJECT-26610117, KAKENHI-PROJECT-16H04035
  • [Journal Article] Excluded volume effect enhances the homology pairing of model chromosomes2016

    • Author(s)
      Kazunori Takamiya, Keisuke Yamamoto, Shuhei Isami, Hiraku Nishimori, and Akinori Awazu
    • Journal Title

      NOLTA

      Volume: 7 Issue: 2 Pages: 66-75

    • DOI

      10.1587/nolta.7.66

    • NAID

      130005142592

    • ISSN
      2185-4106
    • Language
      English
    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120525, KAKENHI-PROJECT-26610117, KAKENHI-PROJECT-16H04035
  • [Journal Article] Simple Elastic Network Models for Exhaustive Analysis of Long Double-Stranded DNA Dynamics with Sequence Geometry Dependence2015

    • Author(s)
      Shuhei Isami, Naoaki Sakamoto, Hiraku Nishimori, and Akinori Awazu
    • Journal Title

      PLoS One

      Volume: 10 Issue: 12 Pages: 143760-143760

    • DOI

      10.1371/journal.pone.0143760

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-26610117, KAKENHI-PUBLICLY-26120525, KAKENHI-PROJECT-25430169
  • [Journal Article] Nuclear dynamical deformation-induced hetero- and euchromatin positioning2015

    • Author(s)
      A. Awazu
    • Journal Title

      Phys. Rev. E

      Volume: 92 Issue: 3 Pages: 032709-032709

    • DOI

      10.1103/physreve.92.032709

    • Peer Reviewed / Acknowledgement Compliant
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Journal Article] Switching of Primarily Relied Information by Ant: A Combinatorial Study of Experiment and Modeling2015

    • Author(s)
      Yusuke Ogihara, Osamu Yamanaka, Toshiaru Akino, Shunsuke Izumu, Akinori Awazu, Hiraku Nishimori
    • Journal Title

      Mathematical Approaches to Biological Systems

      Volume: 1 Pages: 119-138

    • DOI

      10.1007/978-4-431-55444-8_6

    • ISBN
      9784431554431, 9784431554448
    • Peer Reviewed
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Journal Article] Noise-plasticity correlations of gene expression in the multicellular organism Arabidopsis thaliana2015

    • Author(s)
      Koudai Hirao, Atsushi J. Nagano, and Akinori Awazu
    • Journal Title

      J. Theo. Bio.

      Volume: 387 Pages: 13-22

    • DOI

      10.1016/j.jtbi.2015.09.017

    • Peer Reviewed / Acknowledgement Compliant
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Journal Article] Deterioration of the circadian variation of heart rate variability in Brugada syndrome may contribute to the pathogenesis of ventricular fibrillation2014

    • Author(s)
      T. Tokuyama, Y. Nakano, A. Awazu, Y. Uchimura-Makita, M. Fujiwra, Y. Watanabe, A. Sairaku, K. Kajihara, C. Motoda, N. Oda, Y. Kihara
    • Journal Title

      Journal of Cardiology

      Volume: in press

    • Peer Reviewed
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Journal Article] Localized Bioconvection Patterns and Their Initial State Dependency in Euglena gracilis Suspensions in an Annular Container2014

    • Author(s)
      E. Shoji, H. Nishimori, A. Awazu, S. Izumi and M. Iima
    • Journal Title

      J. Phys. Soc. Jpn.

      Volume: 83 Issue: 4 Pages: 43301-43301

    • DOI

      10.7566/jpsj.83.043001

    • NAID

      210000133019

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23540433, KAKENHI-PUBLICLY-25119718, KAKENHI-PROJECT-25513005, KAKENHI-PROJECT-26610117
  • [Journal Article] Segregation and phase inversion of strongly and weakly fluctuating Brownian particle mixtures and a chain of such particle mixtures in spherical containers2014

    • Author(s)
      Akinori Awazu
    • Journal Title

      Physical Review E

      Volume: 90 Issue: 4 Pages: 042308-042308

    • DOI

      10.1103/physreve.90.042308

    • Peer Reviewed / Acknowledgement Compliant
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Journal Article] Deterioration of the circadian variation of heart rate variability in Brugada syndrome may contribute to the pathogenesis of ventricular fibrillation2014

    • Author(s)
      T. Tokuyama, Y. Nakano, A. Awazu, Y. Uchimura-Makita, M. Fujiwra, Y. Watanabe, A. Sairaku, K. Kajihara, C. Motoda, N. Oda, Y. Kihara
    • Journal Title

      Journal of Cardiology

      Volume: in press

    • Peer Reviewed
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Journal Article] Influences of Excluded Volume of Molecules on Signaling Processes on Biomembrane2013

    • Author(s)
      Masashi Fujii
    • Journal Title

      PLOS ONE

      Volume: 143 Issue: 5 Pages: e62218-e62218

    • DOI

      10.1371/journal.pone.0062218

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391, KAKENHI-PUBLICLY-24115515
  • [Journal Article] Influences of Excluded Volume of Molecules on Signaling Processes on Biomembrane2013

    • Author(s)
      M.Fujii, H.Nishimori, A.Awazu
    • Journal Title

      PLOS ONE

      Volume: 8

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Swarming of self-propelled camphor boats2012

    • Author(s)
      E. Heisler, N. J. Suematsu, A. Awazu, and H. Nishimori
    • Journal Title

      Physical Review

      Volume: 85 Pages: 1-4

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Stability of transverse dunes against perturbations: A theoretical studyusing dune skeleton model2012

    • Author(s)
      Hirofumi Niiya, Akinori Awazu, and Hiraku Nishimori
    • Journal Title

      Aeolian Research

      Volume: (In press) Pages: 63-68

    • DOI

      10.1016/j.aeolia.2012.08.008

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-11J07296, KAKENHI-PROJECT-22540391
  • [Journal Article] Swarming of self-propelled camphor boats2012

    • Author(s)
      Eric Heisler
    • Journal Title

      Phys. Rev. E

      Volume: 85 Issue: 5

    • DOI

      10.1103/physreve.85.055201

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391, KAKENHI-PROJECT-23740299
  • [Journal Article] Bifurcation analysis of the transition of dune shape under unidirectional wind2012

    • Author(s)
      Hirofumi Niiya, Hiraku Nishimori, Akinori Awazu
    • Journal Title

      Phys.Rev.Lett.

      Volume: 108

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Collective motion and phase transitions of symmetric camphor boats2012

    • Author(s)
      Eric Heisler
    • Journal Title

      J.Phys.Soc.Jpn

      Volume: 81 Issue: 7 Pages: 74605-74605

    • DOI

      10.1143/jpsj.81.074605

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391, KAKENHI-PROJECT-23740299
  • [Journal Article] Bifurcation Analysis of the Transition of Dune Shapes Under a Unidirectional Wind2012

    • Author(s)
      T. Niiya, A. Awazu, H. Nishimori
    • Journal Title

      Physical Review. Lett

      Volume: 108 Pages: 1-4

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Segregation pattern reorientation of granular mixture on horizontally oscillating tray2012

    • Author(s)
      M. Fujii, A. Awazu, and H. Nishimori
    • Journal Title

      Physical Review

      Volume: 85 Pages: 1-4

    • NAID

      120005147874

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Collective motion and phasetransitions of symmetric camphor boats2012

    • Author(s)
      E. Heisler, N. J. Suematsu, A. Awazu, and H. Nishimor
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 81 Pages: 74605-74605

    • NAID

      40019341526

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Effective stochastic resonance of coupled excitable elements under noise of unequal amplitude2011

    • Author(s)
      R. Kawai, A. Awazu, and H. Nishimori
    • Journal Title

      Physical Review

      Volume: 84

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Localized bioconvection of Euglena caused by phototaxis in the lateral direction2011

    • Author(s)
      N. J. Suematsu, A. Awazu, S. Izumi, S. Nakata, H. Nishimori
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 80

    • NAID

      40018844341

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] 細胞膜上の分子混み合いを考慮したシグナル伝達系モデル2011

    • Author(s)
      藤井雅史、粟津暁紀、西森拓
    • Journal Title

      第17回交通流のシミュレーションシンポシウム 論文集

      Pages: 25-28

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Localized bioconvection of Euglena caused by phototaxis in the lateral direction2011

    • Author(s)
      N.Suematsu, A.Awazu, S.Izumi, S.Noda, S.Nakata, H.Nishimori
    • Journal Title

      J.Phys.Soc.Jpn.

      Volume: 80 Issue: 6 Pages: 064003-064003

    • DOI

      10.1143/jpsj.80.064003

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22510231, KAKENHI-PROJECT-22540391
  • [Journal Article] 化学情報と視覚情報を組み合わせたトビイロケアリの採餌行動の定量的解析2011

    • Author(s)
      荻原悠佑,前田一樹,泉俊輔, 秋野順治, 粟津暁紀,西森拓
    • Journal Title

      第17回交通流のシミュレーションシンポシウム 論文集

      Pages: 21-24

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Effective Stochastic Resonance of Coupled excitable elements under noise of unequal amplitude2011

    • Author(s)
      Ryosuke Kawai, Akinori Awazu, Hiraku Nishimori
    • Journal Title

      Phys.Rev.E

      Volume: 84 Issue: 2

    • DOI

      10.1103/physreve.84.021135

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] 流体力学的相互作用を組み込んだ粒子法による粉体なだれのパターン形成2011

    • Author(s)
      新屋啓文, 粟津暁紀, 西森拓
    • Journal Title

      第17回交通流のシミュレーションシンポシウム 論文集

      Pages: 73-76

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Collective behavior of inanimate boats2010

    • Author(s)
      Nobuhiko J.Suematsu, Satoshi Nakata, Akinori Awazu, Hiraku Nishimori
    • Journal Title

      Physical Review E

      Volume: 81

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Saddle-node bifurcation to jammed state for quasi-one-dimensional counter chemotactic flow2010

    • Author(s)
      Masashi Fujii, Akinori Awazu, Hiraku Nishimori
    • Journal Title

      Physical Review E

      Volume: 82

    • NAID

      120002723241

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Discreteness-Induced Slow Relaxation in Reversible Catalytic Reaction Networks2010

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Journal Title

      Phys.Rev.E 81

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Effective stochastic resonance under noise of heterogeneous amplitude2010

    • Author(s)
      R. Kawai, S. Torigoe, K. Yoshida, A. Awazu, and H. Nishimori
    • Journal Title

      Physical Review

      Volume: 82

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Saddle-Node Bifurcation to Jammed State for Quasi-One-Dimensional Counter Chemotactic Flow2010

    • Author(s)
      M. Fujii, A. Awazu, and H. Nishimori
    • Journal Title

      Physical Review

      Volume: 82

    • NAID

      120002723241

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Collective behavior of inanimate boats2010

    • Author(s)
      N. J. Suematsu, S. Nakata, A. Awazu, and H. Nishimori
    • Journal Title

      Physical Review

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Three-Dimensional Dune Skeleton Model as a Coupled Dynamical System of Two-Dimensional Cross Sections2010

    • Author(s)
      Hirofumi Niiya, Akinori Awazu, Hiraku NishimoriM
    • Journal Title

      Kornal Physical Society of Japan

      Volume: 79

    • NAID

      40017143654

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Effective stochastic resonance under noise of heterogeneous amplitude2010

    • Author(s)
      Ryosuke Kawai, Shogo Torigoe, Kazuhiro Yoshida, Akinori Awazu, Hiraku Nishimori
    • Journal Title

      Physical Review E

      Volume: 82

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Journal Article] Discreteness-Induced Slow Relaxation in Reversible Catalytic Reaction Networks2010

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Journal Title

      Physical Review E

      Volume: 81

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Discreteness-Induced Slow Relaxation in Reversible Catalytic Reaction Networks2010

    • Author(s)
      A. Awazu, K. Kaneko
    • Journal Title

      Phys. Rev. E (in press)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Ubiquitous "glassy" relaxation in catalytic reaction networks2009

    • Author(s)
      A. Awazu, K. Kaneko
    • Journal Title

      Phys. Rev. E 80

    • NAID

      120001924004

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Ubiquitous "glassy" relaxation in catalytic reaction networks2009

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Journal Title

      Physical Review E 80

    • NAID

      120001924004

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Self-organized criticality of a catalytic reaction network under flow2009

    • Author(s)
      A. Awazu, K. Kaneko
    • Journal Title

      Phys. Rev. E 80

    • NAID

      120001924003

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Self-organized criticality of a catalytic reaction network under flow2009

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Journal Title

      Physical Review E 80

    • NAID

      120001924003

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Ubiquitous "glassy" relaxation in catalytic reaction networks2009

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Journal Title

      Phys.Rev.E 80

    • NAID

      120001924004

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Self-organized criticality of a catalytic reaction network under flow2009

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Journal Title

      Phys.Rev.E 80

    • NAID

      120001924003

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Input-dependent wave propagations in asymmetric cellular automata : Possible behaviors of feed-forward loop in biological reaction network2008

    • Author(s)
      Akinori Awazu
    • Journal Title

      Math.Biosci.Eng. 5

      Pages: 419-427

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Input-dependent wave propagations in asymmetric cellular automata : Possible behaviors of feed-forward loop in biological reaction network2008

    • Author(s)
      Akinori Awazu
    • Journal Title

      Mathematical Biosciences and Engineering 5

      Pages: 419-427

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Discreteness-induced Transition in Catalytic Reaction Networks2007

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Journal Title

      Phys.Rev.E 76

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Network Structure Formations in Pulsating Particle Populations2007

    • Author(s)
      Akinori Awazu
    • Journal Title

      Physical Review E 76

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Journal Article] Discreteness-induced Transition in Catalytic Reaction Networks2007

    • Author(s)
      Akinori Awazu
    • Journal Title

      Physical Review E 76

      Pages: 41915-41915

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] リピート DNA 配列から染色体内および染色体間の動態の法則を探る2023

    • Author(s)
      奈良 拓也, 高橋 治子, 粟津 暁紀, 菊池 裕
    • Organizer
      日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] ウニのCTCFは初期発生において分裂期の進行に必須である2023

    • Author(s)
      坂本 尚昭, 渡辺 開智, 藤田 恵, 岡本 和子, 吉岡 一, 森脇 三貴, 田頭 英樹, 粟津 暁紀, 山本 卓,
    • Organizer
      日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] ヒト染色体の細胞種普遍的・特異的な3次元構造を制御するゲノム領域の特徴2023

    • Author(s)
      原岡 郁弥, 粟津 暁紀
    • Organizer
      日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] 培養細胞を用いた白いネコ特有のゲノムと疾患の解析2023

    • Author(s)
      渡邊 開智, 竹本 大悟, 坂本 尚昭, 粟津 暁紀
    • Organizer
      日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] ウニFLVCR遺伝子機能解析とFLVCR遺伝子ノックアウト胚の表現型観察2023

    • Author(s)
      竹本 大悟, 三澤 祐太朗, 渡辺 開智, 坂本 尚昭, 粟津 暁紀
    • Organizer
      日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] A model of communication between individual organisms using dynamic-plastic coupled dynamical systems2023

    • Author(s)
      Haruto Nakata, Akinori Awazu
    • Organizer
      The 61st Annual Meeting of the Biophysical Society of Japan
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] 遅発性アルツハイマー病の状態の多様性とその関連遺伝子群の解析2023

    • Author(s)
      本田 晃誠, 粟津 暁紀
    • Organizer
      日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] 核スペックルの構造形成・動態のシミュレーション2022

    • Author(s)
      若尾 真吾、藤井 雅史、粟津 暁紀
    • Organizer
      第60回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] Simulations of structural dynamics of nuclear speckle2022

    • Author(s)
      Shingo Wakao, Masashi Fuji, Akinori Awazu
    • Organizer
      The 60th Annual Meeting of the Biophysical Society of Japan
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] Exogastrulation due to cytoskeletal polarity distribution in sea urchin embryo2022

    • Author(s)
      Kaichi Watanabe, Yuhei Yasui, Yuta Kurose, Naoaki Sakamoto, Akinori Awazu
    • Organizer
      The 60th Annual Meeting of the Biophysical Society of Japan
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] Single molecule observation of G protein transducin on rhodopsin cluster by high-speed AFM2022

    • Author(s)
      Hayato Yamashita, Akihiro Tsuji, Fumio Hayashi, Kenichi Morigaki, Masashi Fujii, Akinori Awazu, Kazuhiko Hoshikaya, Masayuki Abe
    • Organizer
      第60回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] Exogastrulation due to cytoskeletal polarity distribution in sea urchin embryo2022

    • Author(s)
      Kaichi Watanabe, Yuhei Yasui, Yuta Kurose, Naoaki Sakamoto, Akinori Awazu
    • Organizer
      The 60th Annual Meeting of the Biophysical Society of Japan
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] Epigenetic-structural changes in X chromosomes promote Xic pairing during early differentiation process from embryonic stem cell of mouse2022

    • Author(s)
      Tetsushi Komoto, Masashi Fujii, Akinori Awazu
    • Organizer
      The 60th Annual Meeting of the Biophysical Society of Japan
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] ムラサキウニにおけるCRISPR/Cas9システムを用いたゲノム編集2022

    • Author(s)
      坂本尚昭, 渡辺開智, 粟津暁紀, 山本卓
    • Organizer
      日本ゲノム編集学第7回大会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] マウス胚性幹細胞の初期分化過程におけるX染色体のエピゲノム構造変化はXic対合を促進する2022

    • Author(s)
      小本 哲史、藤井 雅史、粟津 暁紀
    • Organizer
      第60回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] Epigenetic-structural changes in X chromosomes promote Xic pairing during early differentiation process from embryonic stem cell of mouse2022

    • Author(s)
      Tetsushi Komoto, Masashi Fujii, Akinori Awazu
    • Organizer
      The 60th Annual Meeting of the Biophysical Society of Japan
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06124
  • [Presentation] Simulations of structural dynamics of nuclear speckle2022

    • Author(s)
      Shingo Wakao, Masashi Fuji, Akinori Awazu
    • Organizer
      The 60th Annual Meeting of the Biophysical Society of Japan
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] ウニ胚の細胞骨格分布極性に起因する外腸胚形成2022

    • Author(s)
      渡辺 開智、安井 優平、黒瀬 友太、坂本 尚昭、粟津 暁紀
    • Organizer
      第60回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] 空間的局所相互作用を伴う動的・可塑的ネットワーク系の自発的構造形成2021

    • Author(s)
      中西 大斗, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] 空間的局所相互作用を伴う動的・可塑的ネットワーク系の自発的構造形成2021

    • Author(s)
      中西 大斗, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] 核スペックルの構造形成・動態のシミュレーション2021

    • Author(s)
      若尾 真吾, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] ES 細胞のクロマチンドメイン変化による染色体動態制御のモデル2021

    • Author(s)
      小本 哲史, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] ウニにおける H+/K+イオンポンプ活性は胚の細胞骨格分布極性を高めて原腸形成を促進させる2021

    • Author(s)
      渡辺 開智, 安井 優平, 黒瀬 友太, 坂本 尚昭, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] ウニ胚形態形成の細胞骨格観察に基づくモデル化2021

    • Author(s)
      渡辺 開智, 安井 優平, 黒瀬 友太, 坂本 尚昭, 粟津 暁紀
    • Organizer
      日本動物学会 第92回大会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] 出芽酵母の DNA 二本鎖切断時における染色体動態の数理モデル2021

    • Author(s)
      中畑 伸児郎, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] エンハンサー・プロモーター間のDNA特性による転写活性化への影響2021

    • Author(s)
      中川 春風, 高木 春奈, 立本 小百合, 粟津 暁紀, 山本 卓, 坂本 尚昭
    • Organizer
      日本動物学会 第92回大会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] 核スペックルの構造形成・動態のシミュレーション2021

    • Author(s)
      若尾 真吾, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-21K18234
  • [Presentation] ウニにおける H+/K+イオンポンプ活性は胚の細胞骨格分布極性を高めて原腸形成を促進させる2021

    • Author(s)
      渡辺 開智, 安井 優平, 黒瀬 友太, 坂本 尚昭, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] 出芽酵母の DNA 二本鎖切断時における染色体動態の数理モデル2021

    • Author(s)
      中畑 伸児郎, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] ES 細胞のクロマチンドメイン変化による染色体動態制御のモデル2021

    • Author(s)
      小本 哲史, 藤井 雅史, 粟津 暁紀
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] ウニ胚形態形成の細胞骨格観察に基づくモデル化2020

    • Author(s)
      渡辺開智, 黒瀬友太, 安井優平, 坂本尚昭, 粟津暁紀
    • Organizer
      日本動物学会 第91回大会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] 高速AFMによるロドプシンクラスター上トランスデューシン動的過程の観察2020

    • Author(s)
      干鰯谷 和彦, 山下 隼人, 林 文夫, 森垣 憲一 , 藤井 雅史, 粟津 暁紀, 阿部 真之
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] ウニ胚形態形成の細胞骨格観察に基づくモデル化2020

    • Author(s)
      渡辺開智, 黒瀬友太, 安井優平, 坂本尚昭, 粟津暁紀
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] MaChIAto: detailed profiling tool for various genomic features affecting the efficacy of gene knockout, homology-based knock-in, and Prime Editing2020

    • Author(s)
      Sakura T, Nakamae K, Takenaga M, Nakade S, Mitsuhashi T, Nazuka I, Awazu A, Sakamoto N, Yamamoto T
    • Organizer
      CRISPR and Beyond
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] 基準振動解析を用いたロドプシンの動態予測と機能の連関2020

    • Author(s)
      金重 先人, 藤井 雅史, 林 文夫, 森垣 憲一, 山下 隼人, 粟津 暁紀
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] ウニの発生初期における核内染色体構造の動的および細胞特異的変化2020

    • Author(s)
      安井優平, 杉山文香, 坂本尚昭, 粟津暁紀
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] Extended analysis of amplicon sequencing data with MaChIAto for Prime Editing2020

    • Author(s)
      Nakamae K, Takenaga M, Nakade S, Nazuka I, Awazu A, Sakamoto N, Sakuma T, Yamamoto T
    • Organizer
      CSHL meeting - Genome Engineering: CRISPR Frontiers
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] 基準振動解析を用いたロドプシンの動態予測と機能の連関2020

    • Author(s)
      金重 先人, 藤井 雅史, 林 文夫, 森垣 憲一, 山下 隼人, 粟津 暁紀
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] ウニの発生初期における核内染色体構造の動的および細胞特異的変化2020

    • Author(s)
      安井優平, 杉山文香, 坂本尚昭, 粟津暁紀
    • Organizer
      日本動物学会 第91回大会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] MaChIAto:CRISPRによるゲノム編集結果と標的のゲノム特性との関連性プロファイリングツール2020

    • Author(s)
      中前 和恭、武永 充正、中出 翔太、名塚 一郎、粟津 暁紀、坂本 尚昭、佐久間 哲史、山本 卓
    • Organizer
      第43回 日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] ArsInsC配列及びDNA反復配列の物理的特性・機能性解析2020

    • Author(s)
      小田竜平, 藤井雅史, 坂本尚昭, 粟津暁紀
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] 高速AFMによるロドプシンクラスター上トランスデューシン動的過程の観察2020

    • Author(s)
      干鰯谷和彦、山下隼人、林文夫、森垣憲一、藤井雅史、粟津暁紀、阿部真之
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20H03223
  • [Presentation] ウニ初期胚の核及び核内動態の蛍光イメージング観察・解析2020

    • Author(s)
      今田実子, 杉山文香, 林紗弥香, 渡邊開智, 安井優平, 坂本尚昭, 粟津暁紀
    • Organizer
      第58回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20K06602
  • [Presentation] Relationship of between circadian rhythm and a social interaction of ants, Camponotus Japonicus2019

    • Author(s)
      Takumi Odan, Osamu Yamanaka, Masashi Shiraishi, Akinori Awazu, Hiraku Nishimori
    • Organizer
      ICMMA 2019 International Conference on "Spatio-temporal patterns on various levels of the hierarchy of life"
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Presentation] Insulator Activities of Nucleosome-Excluding DNA Sequences Without Chromatin Loop Form2019

    • Author(s)
      Akinori Awazu
    • Organizer
      The 57th Annual Meeting of the Biophysical Society of Japan
    • Invited
    • Data Source
      KAKENHI-PROJECT-18K06149
  • [Presentation] 網膜桿体細胞内円盤膜上での脂質-光受容タンパク質秩序形成の数理モデル2019

    • Author(s)
      金重 先人, 谷本 泰士, 西森 拓, 林 文夫, 森垣 憲一, 粟津 暁紀
    • Organizer
      日本物理学会 2019春季大会
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] Insulator Activities of Nucleosome-Excluding DNA Sequences Without Chromatin Loop Form2019

    • Author(s)
      Akinori Awazu
    • Organizer
      The 57th Annual Meeting of Biophysical Society of Japan
    • Invited
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] Insulator Activities of Nucleosome-Excluding DNA Sequences Without Chromatin Loop Form2019

    • Author(s)
      Akinori Awazu
    • Organizer
      The 57th Annual Meeting of Biophysical Society of Japan
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] nsulator Activities of Nucleosome-Excluding DNA Sequences Without Chromatin Loop Form2019

    • Author(s)
      Akinori Awazu
    • Organizer
      The 57th Annual Meeting of Biophysical Society of Japan(
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Presentation] 網膜桿体細胞内円盤膜上での脂質-光受容タンパク質秩序形成の数理モデル2019

    • Author(s)
      金重 先人、谷本 泰士、西森 拓、森垣 憲一、林 文夫、粟津 暁紀
    • Organizer
      第57回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] 網膜桿体細胞内円盤膜上での脂質-光受容タンパク質秩序形成の数理モデル2018

    • Author(s)
      金重 先人, 谷本 泰士, 西森 拓, 林 文夫, 森垣 憲一, 粟津 暁紀
    • Organizer
      定量生物学会
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] 遅発性アルツハイマー病に関連する新規ゲノム領域の網羅的探索2018

    • Author(s)
      廣瀬 湧大, 西森 拓, 粟津 暁紀
    • Organizer
      第56回生物物理学会
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] 数理モデルとライブイメージングデータを用いた分裂酵母間期核内構造の解析2018

    • Author(s)
      高山 雄揮, 伊藤 寛朗, 千田 久通, 西森 拓, 上野 勝, 粟津 暁紀
    • Organizer
      第56会生物物理学会
    • Data Source
      KAKENHI-PROJECT-18K06149
  • [Presentation] 核膜変形と核内流体を考慮した分裂酵母染色体動態の物理モデル2018

    • Author(s)
      高尾 和孝, 西森 拓, 粟津 暁紀
    • Organizer
      第56会生物物理学会
    • Data Source
      KAKENHI-PROJECT-18K06149
  • [Presentation] ヌクレオソーム排他的領域のインスレーター機能の解析2018

    • Author(s)
      松島 佑樹, 西森 拓, 坂本 尚昭, 粟津 暁紀
    • Organizer
      第56回生物物理学会
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] 核膜変形と核内流体を考慮した分裂酵母染色体動態の物理モデル2018

    • Author(s)
      高尾 和孝, 西森 拓, 粟津 暁紀
    • Organizer
      第56回生物物理学会
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] 過渡的に生じる中間体ヌクレオソームにおけるヒストンテール動態2018

    • Author(s)
      亀田 健, 冨樫 祐一, 粟津 暁紀
    • Organizer
      第56会生物物理学会
    • Data Source
      KAKENHI-PROJECT-18K06149
  • [Presentation] ヌクレオソーム排他的領域のインスレーター機能の解析2018

    • Author(s)
      松島 佑樹, 西森 拓, 坂本 尚昭, 粟津 暁紀
    • Organizer
      第56会生物物理学会
    • Data Source
      KAKENHI-PROJECT-18K06149
  • [Presentation] Chromatin segregation induced by nuc leus envelope dynamical deformities2018

    • Author(s)
      Akinori Awazu
    • Organizer
      THE 3 RD HIROSHIMA INTERNATIONAL SYMPOSIUM ON FUTURE SCIENCE “FRONTIERS IN BIOIMAGING BASED LIFE SCIENCE”
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] 数理モデルとライブイメージングデータを用いた分裂酵母間期核内構造の解析2018

    • Author(s)
      高山 雄揮, 伊藤 寛朗, 千田 久通, 西森 拓, 上野 勝, 粟津 暁紀
    • Organizer
      第56回生物物理学会
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] 核膜変形と核内流体を考慮した分裂酵母減数分裂期染色体のモデル2018

    • Author(s)
      高尾 和孝, 西森 拓, 粟津 暁紀
    • Organizer
      日本物理学会 第73回年次大会
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] A mathematical model of pattern formation of lipid-photoreceptor protein on disk membrane o retinal cells2018

    • Author(s)
      金重 先人, 谷本 泰士, 西森 拓, 林 文夫, 森垣 憲一, 粟津 暁紀
    • Organizer
      日本生物物理学会第56回年会
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] Raftophilicity and aggregation of membrane proteins in the photo-transduction2018

    • Author(s)
      Kenichi Morigaki, Yasushi Tanimoto, Hayato Yamashita, Akinori Awazu, Fumio Hayashi
    • Organizer
      日本生物物理学会第56回年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] Dynamic changes in the interchromosomal interaction of early histone gene loci during development of sea urchin2018

    • Author(s)
      松下 将也, 落合 博, 鈴木 賢一, 林 紗弥香, 杉山 文香, 山本 卓, 粟津 暁紀, 坂本 尚昭
    • Organizer
      第56会生物物理学会
    • Data Source
      KAKENHI-PROJECT-18K06149
  • [Presentation] Dynamic changes in the interchromosomal interaction of early histone gene loci during development of sea urchin2018

    • Author(s)
      松下 将也, 落合 博, 鈴木 賢一, 林 紗弥香, 杉山 文香, 山本 卓, 粟津 暁紀, 坂本 尚昭
    • Organizer
      第56回生物物理学会
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] アリの採餌における動員のダイナミクスと労働階層発現のモデル2018

    • Author(s)
      門田梨歩, 山中治, 白石允梓, 粟津暁紀, 西森拓
    • Organizer
      日本物理学会2018年秋季大会
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Presentation] 核膜変形と核内流体を考慮した分裂酵母減数分裂期染色体のモデル2017

    • Author(s)
      高尾 和孝, 西森 拓, 粟津 暁紀
    • Organizer
      日本物理学会 第73回年次大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-17K05614
  • [Presentation] Situation-Dependent Task Allocation in Camponotus japonicus2017

    • Author(s)
      Masahiro Nakao, Osamu Yamanaka, Masashi Shiraishi, Akinori Awazu, Hiraku Nishimori
    • Organizer
      SWARM 2017The 2nd International Symposium on Swarm Behavior and Bio-Inspired Robotics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Presentation] Reconstitution and quantitative analyses of membrane signal transduction by using micropatterned model system2017

    • Author(s)
      Morigaki, K., Tanimoto, Y., Kojima, S., Awazu, A., Hayashi, F.
    • Organizer
      ConBio 2017
    • Invited
    • Data Source
      KAKENHI-PROJECT-17KT0024
  • [Presentation] Analysis on Activity Statistics and Its Dependence on Spatial Location in the Nest using RFID Sensors in Campnotus janpnicus2017

    • Author(s)
      Masashi Shiraishi,Osamu Yamanaka, Akinori Awazu, Hiraku Nishimori
    • Organizer
      SWARM 2017:The 2nd International Symposium on Swarm Behavior and Bio-Inspired Robotics,
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H04035
  • [Presentation] 真核生物核内染色体動態と減数分裂時対合形成の動力学モデル2016

    • Author(s)
      粟津暁紀
    • Organizer
      新学術領域「少数性生物学」 研究成果報告会
    • Place of Presentation
      東京大学
    • Year and Date
      2016-03-15
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Presentation] 網膜桿体細胞における核内染色体構造形成と光情報伝達仮定の数理モデル2015

    • Author(s)
      粟津暁紀
    • Organizer
      日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2015-12-01
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Presentation] Coarse-grained model of micro and macro chromatin dynamics in nucleus2015

    • Author(s)
      粟津暁紀
    • Organizer
      生命ダイナミクスの数理とその応用
    • Place of Presentation
      東京大学
    • Year and Date
      2015-12-09
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Presentation] Inference of the influence of metabolites on gene expression based on statistical analysis of microarray data2014

    • Author(s)
      宮本万理子,渡邊俊介,坂本敦,西森拓,粟津暁紀
    • Organizer
      植物生理学会
    • Place of Presentation
      富山大学
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Presentation] 染色体対合形成の力学モデル2014

    • Author(s)
      山本佳典,西森拓,粟津暁紀
    • Organizer
      日本物理学会 年会
    • Place of Presentation
      東海大学
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] ランスクリプトームデータの揺らぎ解析2014

    • Author(s)
      粟津暁紀
    • Organizer
      超高速環境パラメータ最適化の研究会
    • Place of Presentation
      大阪府立大学
    • Year and Date
      2014-08-07
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Presentation] トランスクリプトームデータの揺らぎ解析2014

    • Author(s)
      粟津 暁紀
    • Organizer
      超高速環境パラメータ最適化の研究会
    • Place of Presentation
      大阪府立大学
    • Year and Date
      2014-08-07
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Presentation] 植物の遺伝子発現に見られる揺らぎと環境応答の関係2014

    • Author(s)
      粟津暁紀,永野惇
    • Organizer
      日本物理学会
    • Place of Presentation
      東海大学
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Presentation] 転写制御に関わるDNA力学過程の粗視化モデルによる考察2014

    • Author(s)
      粟津暁紀
    • Organizer
      生命ダイナミックスの数理とその応用
    • Place of Presentation
      東京大学
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] 公共データベースに基づく植物の環境応答遺伝子発現の解析2013

    • Author(s)
      粟津暁紀
    • Organizer
      スパースモデリング、クロマチン動態数理科学研究拠点との合同シンポジウム
    • Place of Presentation
      広島大学
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Presentation] 生体分子の局所的物性変化が運動-機能に及ぼす影響の粗視化モデル による解析2013

    • Author(s)
      粟津暁紀
    • Organizer
      生命科学に取り組む異分野融合と交流の推進、スーパーコンピュータ「京」と生命科学
    • Place of Presentation
      岡山大学
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] ミドリムシ生物対流構造と走光性2013

    • Author(s)
      庄司江梨花,粟津暁紀,西森拓,泉俊輔,飯間信
    • Organizer
      日本物理学会
    • Place of Presentation
      徳島大学
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Presentation] DNAの粗視化モデルによるArsインスレーターの運動性と機能性の解析2013

    • Author(s)
      山本佳典,立本小百合,坂本尚昭,西森拓,粟津暁紀
    • Organizer
      日本物理学会 分化会
    • Place of Presentation
      徳島大学
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] 細胞膜上反応系モデルの分子混合い効果2013

    • Author(s)
      藤井雅史,西森拓,粟津暁紀
    • Organizer
      日本物理学会 分化会
    • Place of Presentation
      徳島大学
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] A Model for the Crestline Dynamics of Dunes2012

    • Author(s)
      Hiraku Nishimori, Hirofumi Niiya, Akinori Awazu
    • Organizer
      8th European Solid Mechanics Conference
    • Place of Presentation
      Graz, Austria
    • Year and Date
      2012-07-09
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Presentation] 分子混み合いを考慮した細胞内反応系の理論的考察2012

    • Author(s)
      藤井雅史、西森拓、粟津暁紀
    • Organizer
      日本生物物理学会
    • Place of Presentation
      名古屋大学
    • Year and Date
      2012-09-22
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] Theoretical study of Influences of Molecular Crowding to Enzyme Reactions in Vesicle2012

    • Author(s)
      Masashi Fujii, Hiraku Nishimori, and Akinori Awazu
    • Organizer
      Paradigm Innovation in Biology: Novel Strategy and Thinking
    • Place of Presentation
      Taipei, Taiwan
    • Year and Date
      2012-10-16
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] Enhancement of Signal Transduction Processes on Cell Membrane through Molecular Crowding-Induced Spatial Organization2012

    • Author(s)
      Masashi Fujii, Hiraku Nishimori, and Akinori Awazu
    • Organizer
      Paradigm Innovation in Biology: Novel Strategy and Thinking
    • Place of Presentation
      Taipei, Taiwan
    • Year and Date
      2012-10-16
    • Data Source
      KAKENHI-PUBLICLY-24115515
  • [Presentation] Collective behavior of camphor boats on a annular water channel2011

    • Author(s)
      Nobuhiko J. SUEMATSU, Akinori AWAZU, Satoshi NAKATA, Hiraku NISHIMORI
    • Organizer
      Collective Dynamics and Pattern Formation in Active Matter Systems
    • Place of Presentation
      Max Plank Institute for Physics of Complex Systems (Dresden)
    • Data Source
      KAKENHI-PROJECT-23740299
  • [Presentation] Quantitive analysis of foraging of the Lasius Japonicus using chemical cues and visual cues2011

    • Author(s)
      Yusuke Ogihara Kazuki Maeda Katsunori Naka Shunsuke Izumi Toshiharu Akino Akinori Awazu Hiraku Nishimori
    • Organizer
      International Symposium on Complex Systems 2011
    • Place of Presentation
      Tokyo
    • Year and Date
      2011-12-02
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Presentation] アリの集団採餌における判断と行動2011

    • Author(s)
      西森 拓, 荻原 悠佑, 粟津 暁紀,秋野 順治
    • Organizer
      第12回計測自動制御学会システムインテグレーション部門講演会
    • Place of Presentation
      京都大学
    • Year and Date
      2011-12-23
    • Data Source
      KAKENHI-PROJECT-22540391
  • [Presentation] 可逆触媒反応ネットワーク系の構造と機能性:定常状態と緩和と効率2010

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会年次大会
    • Place of Presentation
      岡山大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Glassy behaviors in catalytic reaction networks2010

    • Author(s)
      粟津暁紀
    • Organizer
      基研研究会非平衡系の物理-非平衡ゆらぎと集団挙動
    • Place of Presentation
      京都大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] 粒子の離散性による触媒反応ネットワークの緩和時間の変化2010

    • Author(s)
      佐野真二, 粟津暁紀, 金子邦彦
    • Organizer
      日本物理学会秋期大会
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] 可逆触媒反応ネットワーク系の構造と機能性:定常状態と緩和と効率2010

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会
    • Place of Presentation
      岡山大学
    • Year and Date
      2010-03-20
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] 可逆触媒反応ネットワーク群が構成する"生態系"の環境変動に対する応答2010

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会秋期大会
    • Place of Presentation
      大阪府立大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Evolution of ecological network of ideal metabolic networks under fluctuating environment2010

    • Author(s)
      粟津暁紀
    • Organizer
      日本生物物理学会
    • Place of Presentation
      東北大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Glassy behaviors in catalytic reaction networks2010

    • Author(s)
      粟津暁紀
    • Organizer
      基研研究会 非平衡系の物理
    • Place of Presentation
      京都大学
    • Year and Date
      2010-11-19
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Glassy dynamics in catalytic reaction networks2010

    • Author(s)
      Akinori Awazu
    • Organizer
      DYNAMICS DAYS ASIA PACIFIC 6
    • Place of Presentation
      University of New South Wales, Australia
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Glassy dynamics in catalytic reaction networks2010

    • Author(s)
      Akinori Awazu
    • Organizer
      DYNAMICS DAYS ASIA PACIFIC 6
    • Place of Presentation
      University of New South Wales, Australia(招待講演)
    • Year and Date
      2010-07-13
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] 可逆触媒反応ネットワーク群が構成する'生態系'の環境変動に対する応答2010

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会秋期大会
    • Place of Presentation
      大阪府立大学
    • Year and Date
      2010-09-19
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Molecular Discreteness Induced Slow Relaxation in Reversible Catalytic Reaction Networks2009

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会
    • Place of Presentation
      東京都(立教大学)
    • Year and Date
      2009-03-29
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Self-organized criticality of a catalytic reaction network2009

    • Author(s)
      Akinori Awazu, Kunihiko Kaneko
    • Organizer
      International Symposium on Complex system biology.
    • Place of Presentation
      Tokyo Univ.
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] 分子内力学ネットワークと分子間反応ネットワークのフラストレーションと機能2009

    • Author(s)
      粟津暁紀
    • Organizer
      日本生物物理学会
    • Place of Presentation
      アスティ徳島
    • Year and Date
      2009-10-31
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Discreteness-induced transition and self-organized criticality in catalytic reaction networks2009

    • Author(s)
      Akinori Awazu
    • Organizer
      International symposium on Complex System Biology
    • Place of Presentation
      東京大学
    • Year and Date
      2009-09-30
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] 触媒反応ネットワークの緩和過程における粒子の離散性効果2009

    • Author(s)
      佐野真二、粟津暁紀、金子邦彦
    • Organizer
      日本物理学会年会
    • Place of Presentation
      立教大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Molecular Discreteness Induced Slow Relaxation in Reversible Catalytic Reaction Networks2009

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会年会
    • Place of Presentation
      立教大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Glassy Behaviors in Catalytic Reaction Network II2008

    • Author(s)
      粟津暁紀、金子邦彦
    • Organizer
      日本物理学会秋季大会
    • Place of Presentation
      岩手大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Glassy Behaviors in Catalytic Reaction Network II2008

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会
    • Place of Presentation
      盛岡市(岩手大学)
    • Year and Date
      2008-09-20
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Self-organized criticality in catalytic reaction network2008

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会
    • Place of Presentation
      盛岡市(岩手大学)
    • Year and Date
      2008-09-23
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Self-organized criticality in catalytic reaction network2008

    • Author(s)
      粟津暁紀、金子邦彦
    • Organizer
      日本物理学会秋季大会
    • Place of Presentation
      岩手大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Glassy Behaviors in Catalytic Reaction Network2008

    • Author(s)
      粟津暁紀、金子邦彦
    • Organizer
      日本物理学会年会
    • Place of Presentation
      近畿大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Control of energy flows in biochemical reaction system2008

    • Author(s)
      粟津暁紀
    • Organizer
      日本生物物理学会
    • Place of Presentation
      福岡市(福岡国際会議場)
    • Year and Date
      2008-12-04
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] 反応ネットワーク系の構造、ダイナミックス、分子の離散性効果の関係2007

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会年会
    • Place of Presentation
      北海道大学
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] Transition by Molecular Number Fluctuation in Reaction Network2007

    • Author(s)
      粟津暁紀
    • Organizer
      日本生物物理学会
    • Place of Presentation
      神奈川県横浜市
    • Data Source
      KAKENHI-PROJECT-19740260
  • [Presentation] マイクロアレイデータに基づく植物の遺伝子発現揺らぎと機能の関係

    • Author(s)
      平尾耕大,永野惇,西森拓,粟津暁紀
    • Organizer
      植物生理学会
    • Place of Presentation
      東京農業大学
    • Year and Date
      2015-03-16 – 2015-03-18
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Presentation] 局所的に揺らぎの強さが異なる非平衡バネビーズ系の構造形成

    • Author(s)
      粟津暁紀
    • Organizer
      日本物理学会
    • Place of Presentation
      中部大学
    • Year and Date
      2014-09-07 – 2014-09-10
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • [Presentation] マイクロアレイデータに基づく植物の遺伝子発現揺らぎと応答の関係

    • Author(s)
      平尾耕大,永野惇,西森拓,粟津暁紀
    • Organizer
      日本物理学会
    • Place of Presentation
      早稲田大学
    • Year and Date
      2015-03-21 – 2015-03-24
    • Data Source
      KAKENHI-PUBLICLY-25119718
  • [Presentation] Pattern formations of a polymer consisting of “hot” and “cold” monomers as a model of chromosome (Kyoto University, Japan)

    • Author(s)
      Akinori Awazu
    • Organizer
      THE 4D NUCLEOME 2014
    • Place of Presentation
      安芸グランドホテル
    • Year and Date
      2014-12-17 – 2014-12-20
    • Data Source
      KAKENHI-PUBLICLY-26120525
  • 1.  Naoaki Sakamoto (00332338)
    # of Collaborated Projects: 5 results
    # of Collaborated Products: 18 results
  • 2.  NISHIMORI Hiraku (50237749)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 29 results
  • 3.  NAKATA Satoshi (50217741)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 5 results
  • 4.  SUEMATSU Nobuhiko (80542274)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 7 results
  • 5.  AKINO Toshiharu (40414875)
    # of Collaborated Projects: 3 results
    # of Collaborated Products: 17 results
  • 6.  Morigaki Kenichi (10358179)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 12 results
  • 7.  YAMASHITA Hayato (10595440)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 7 results
  • 8.  林 文夫 (80093524)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 13 results
  • 9.  上野 勝 (90293597)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 1 results
  • 10.  Murayama Yoshihiro (60334249)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  泉 俊輔 (90203116)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 12.  楯 真一 (20216998)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 13.  白石 允梓 (20632144)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 14.  下出 紗弓 (90772103)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  TOGASHI Yuichi
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 16.  落合 博
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 17.  藤井 雅史
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 2 results
  • 18.  飯間 信
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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