Goto Susumu 五斗進

… Alternative Names

五斗進ゴトウススム

GOTO Susumu 五斗進

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Researcher Number	40263149
Other IDs
Affiliation (Current)	2025: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 教授
Affiliation (based on the past Project Information) *help	2021 – 2022: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 教授 2020: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), 大学共同利用機関等の部局等, 教授 2017: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 教授 2017: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), 大学共同利用機関等の部局等, 教授 2016: 京都大学, 化学研究所, 研究員 … More 2016: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイエンス統合データベースセンター), ライフサイエンス統合データベースセンター, 教授 2014 – 2015: 京都大学, 化学研究所, 准教授 2007 – 2009: 京都大学, 化学研究所, 准教授 2000 – 2006: 京都大学, 化学研究所, 助教授 2002: 京都大学, 化学研究所, 教授 Less
Review Section/Research Field	Principal Investigator Bioinformatics/Life informatics / Biological Sciences / Life / Health / Medical informatics Except Principal Investigator Medium-sized Section 63:Environmental analyses and evaluation and related fields / Aquatic life science / Chemical pharmacy / Biological Sciences
Keywords	Principal Investigator データベース / バイオインフォマティクス / 抗原変異 / 糖鎖結合モチーフ / ヘパリン / 赤血球結合膜タンパク質 / 赤血球 / 配列解析 / rifin遺伝子ファミリー / var遺伝子ファミリー … More / ワクチン開発 / Plasmodium falciparum / マラリア / Network topology / GRID / Reaction network / Molecular interaction / Algorithm / Ontology / Bioinformatics / Database / マイクロアレイ発現データ / 知識抽出 / ゲノムデータベース / 相関ルール発見手法 / リンク情報 / アミノ酸配列類似度データ / 経路探索 / 相関クラスタ / グラフ比較 / 酵素反応 / 分子生物学データベース / グリッドコンピューティング / タンパク質間相互作用予測 / 文献からの知識抽出 / タンパク質立体構造予測 / 統合データベース / グラフトポロジー / 糖鎖構造データベース / 化合物構造比較 / ネットワークトポロジー / グリッド / 反応ネットワーク / 分子間相互作用 / アルゴリズム / オントロジー / 病原微生物 / 進化 / 遺伝子ファミリー / 比較ゲノム … More Except Principal Investigator 微生物機能分類 / 生理代謝機能 / マンガン酸化菌 / ゲノム情報 / 培養化 / 培地データベース / Genomaple / 生理代謝ポテンシャル / 嫌気的マンガン酸化菌 / 再構築ゲノム / メタゲノム / 未培養菌の培養化 / 好熱微生物 / メタンハイドレード / 水素生成 / 一酸化炭素資化性菌 / ミクロコズム / 好熱菌 / 海洋コア / トランスクリプトーム解析 / ゲノム解析 / CO代謝 / 一酸化炭素資化菌 / Artificial repressor / Artificial restriction enzyme / Gene target / DNA bending / DNA motif / DNA recognition / Artificial protein / Zinc finger / DNAモチーフ / DNA認識 / DNA湾曲 / 人工リプレッサー / 人工制限酵素 / 人工タンパク質 / 遺伝子ターゲット / 亜鉛フィンガー / 遺伝子間相互作用 / べき乗則 / システム生物学 / バイオインフォマティクス / 概日リズム / ネットワーク定常状態 / オペロン / 遺伝子発現データ / 神経細胞 / 形態形成 / ブーリアンネットワーク / 緑膿菌 / 進化動力学モデル / スケールフリー / 生物情報ネットワーク / 大規模進化動力学モデル / 遺伝子発現 / タンパク質ドメイン / スケールフリーネットワーク / タンパク質相互作用 / 代謝ネットワーク / 遺伝子ネットワーク Less

Culturing strategies for uncultivated environmental microorganisms based on genome and medium information
- Principal Investigator
  
  Takami Hideto
- Project Period (FY)
  2021 – 2022
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 63:Environmental analyses and evaluation and related fields
- Research Institution
  The University of Tokyo
Comprehensive, spatiotemporal study and applied research of carboxydotrophs
- Principal Investigator
  
  SAKO Yoshihiko
- Project Period (FY)
  2016 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Aquatic life science
- Research Institution
  Kyoto University
Evolutionary mechanism of antigenic variation genesPrincipal Investigator
- Principal Investigator
  
  Goto Susumu
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  大学共同利用機関法人情報・システム研究機構(機構本部施設等)
  Kyoto University
マラリア原虫Plasmodium falciarumの疾病立過程に関する研究Principal Investigator
- Principal Investigator
  
  五斗進
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for JSPS Fellows
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Kyoto University
Analysis of Structure and Dynamics of Biological Information Networks
- Principal Investigator
  
  AKUTSU Tatsuya
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Kyoto University
Construction and Retrieval of Highly Integrated Biological DatabasesPrincipal Investigator
- Principal Investigator
  
  GOTO Susumu
- Project Period (FY)
  2000 – 2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Kyoto University
Development or order-mede type artificial restriction enzymes and artificial repressers
- Principal Investigator
  
  SUGIURA Yukio
- Project Period (FY)
  2000 – 2002
- Research Category
  
  Grant-in-Aid for University and Society Collaboration
- Research Field
  
  Chemical pharmacy
- Research Institution
  KYOTO UNIVERSITY

All 2017 2009 2008 2007 2006 2005 2004

All Journal Article Presentation

[Journal Article] Discriminating the reaction types of plant type III polyketide synthases.2017
- Author(s)
  Shimizu, Y., Ogata, H. and Goto, S.
- Journal Title
  
  Bioinformatics
  
  Volume: 印刷中 Issue: 13 Pages: 1937-1943
- DOI
  10.1093/bioinformatics/btx112
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26280105
[Journal Article] Revealing phenotype-associated functional differences by genome-wide scan of ancient haplotype blocks.2017
- Author(s)
  Onuki, R., Yamaguchi, R., Shibuya, T., Kanehisa, M. and Goto, S.
- Journal Title
  
  PLOS ONE
  
  Volume: 印刷中
- NAID
  120006309307
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26280105
[Journal Article] Type III polyketide synthases: functional classification and phylogenomics.2017
- Author(s)
  Shimizu, Y., Ogata, H. and Goto, S.
- Journal Title
  
  ChemBioChem
  
  Volume: 18 Issue: 1 Pages: 50-65
- DOI
  10.1002/cbic.201600522
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26280105
[Journal Article] Systems biology approaches and tools for investigating cardiovascular disease2009
- Author(s)
  Wheelock, C.E., Wheelock, A.M., Kawashima, S., Diez, D., Kanehisa, M., van Erk, M., Kleemann, R., Haeggstrom, J.Z., Goto, S.
- Journal Title
  
  Molecular Biosystems 5
  
  Pages: 588-602
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Systems biology approaches and tools for investigating cardiovascular disease2009
- Author(s)
  C.E.Wheelock, A.M.Wheelock, S.Kawashima, D.Diez, M.Kanehisa, M.van Erk, R.Kleemann, J.Z.Haeggstrom, S.Goto
- Journal Title
  
  Molecular Biosystems
  
  Volume: 5 Pages: 588-602
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] varDB : a pathogen-specific database of protein families involved in antigenic variation2008
- Author(s)
  C.N. Hayes, D. Diez, N. Joannin, W. Honda, M. Kanehisa, W. Wahlgren. C.E Wheelock and S. Goto
- Journal Title
  
  Bioinformatics 24
  
  Pages: 2564-2565
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] KEGG Atlas mapping for global analysis of metabolic pathways2008
- Author(s)
  S. Okuda, T. Yamada, M. Hamajima, M. Itoh, T. Katayama, P. Bork, S. Goto and M. Kanehisa
- Journal Title
  
  Nucleic Acids Research 36
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Prediction of missing enzyme genes in bacterial metabolic network : A reconstruction of lysine degradation pathway of Pseudomonas aeruginosa2007
- Author(s)
  Yamanishi, Y., Mihara, H., Osaki, M., Muramatsu, H., Esaki, N., Sato, T., Hizukuri, Y., Goto, S., Kanehisa, M.
- Journal Title
  
  FEBS Journal 274
  
  Pages: 2262-2273
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Evolutionary history and functional implication of protein domains and their combinations in eukaryotes2007
- Author(s)
  Itoh, M., Nacher, J. C., Kuma, K., Goto, S., and Kanehisa, M.
- Journal Title
  
  Genome Biology 8(論文番号)
  
  Pages: 121-121
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Characterization of relationships between transcriptional units and operon structures in Bacillus subtilis and Escherichia coli2007
- Author(s)
  Okuda, S., Kawashima, S., Kobayashi, K., Ogasawara, N., Kanehisa, M., and Goto S.
- Journal Title
  
  BMC Genomics 8(論文番号)
  
  Pages: 48-48
- NAID
  120004770315
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Regulation of metabolic networks by small molecule metabolites2007
- Author(s)
  Gutteridge, A., Kanehisa, M., and Goto S.
- Journal Title
  
  BMC Bioinformatics 8(論文番号)
  
  Pages: 88-88
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] The commonality of protein interaction networks determined in neurode generative disorders (NDDs)2007
- Author(s)
  Limviphuvadh, V., Tanaka, S., Goto, S., Ueda, K., and Kanehisa, M.
- Journal Title
  
  Bioinformatics 23
  
  Pages: 2129-2138
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Prediction of missing enzyme genes in bacterial metabolic network: A reconstruction of lysine degradation pathway of Pseudomonas aeruginosa2007
- Author(s)
  Yamanishi, Y., Mihara, H., Osaki, M., Muramatsu, H., Esaki, N., Sato, T., Hizukuri, Y., Goto, S., and Kanehisa, M.
- Journal Title
  
  FEBS Journal 274
  
  Pages: 2262-2273
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Analysis of the differences in metabolic network expansion between prokaryotes and eukaryotes2006
- Author(s)
  Tanaka, M., Yamada, T., Itoh, M., Okuda, S., Goto, S., Kanehisa, M.
- Journal Title
  
  Genome Informatics 17
  
  Pages: 230-239
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Extraction of phylogenetic network modules from the metabolic network2006
- Author(s)
  Yamada, T., Kanehisa, M., Goto, S.
- Journal Title
  
  BMC Bioinformatics 7
  
  Pages: 130-130
- NAID
  120004770316
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] ODB : a database of operons accumulating known operons across multiple genomes2006
- Author(s)
  Okuda S., Katayama, T., Kawashima S., Goto, S., Kanehisa M.
- Journal Title
  
  Nucleic Acids Research 34
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Conservation of gene co-regulation between two prokaryotes. Bacillus subtilis and Escherichia coli2005
- Author(s)
  Okuda, S., Kawashima, S., Goto, S., Kanehisa, M.
- Journal Title
  
  Genome Informatics 16
  
  Pages: 116-124
- Data Source
  KAKENHI-PROJECT-17017019
[Journal Article] Fast and accurate database homology search using upper bounds of local alignment2005
- Author(s)
  Itoh, M., Goto, S., Akutsu, T., Kanehisa, M.
- Journal Title
  
  Bioinformatics 21
  
  Pages: 912-921
- Data Source
  KAKENHI-PROJECT-12208007
[Journal Article] Two complementary representations of a scale-free network2005
- Author(s)
  Nacher, J.C., Yamada, T., Goto, S., Kanehisa, M., Akutsu, T.
- Journal Title
  
  Physica A 349
  
  Pages: 349-363
- Data Source
  KAKENHI-PROJECT-12208007
[Journal Article] Computational assignment of the EC numbers for genomic-scale analysis of enzymatic reactions2004
- Author(s)
  Kotera, M., Okuno, Y., Hattori, M., Goto, S., Kanehisa, M.
- Journal Title
  
  J.Am.Chem.Soc. 126
  
  Pages: 16487-16498
- Data Source
  KAKENHI-PROJECT-12208007
[Journal Article] Extraction of phylogenetic network modules from prokaryote Metabokic pathways2004
- Author(s)
  Yamada, T., Goto, S., Kanehisa, M.
- Journal Title
  
  Genome Informatics 15
  
  Pages: 249-259
- Data Source
  KAKENHI-PROJECT-12208007
[Presentation] ESTからの植物ゲノムアノテーションとパスウェイ解析2008
- Author(s)
  五斗進
- Organizer
  日本植物生理学会第49回年会
- Place of Presentation
  札幌コンベンションセンター
- Year and Date
  2008-03-20
- Data Source
  KAKENHI-PROJECT-17017019
[Presentation] 代謝ネットワークのトポロジー解析2007
- Author(s)
  五斗進
- Organizer
  九州大学産業技術数理研究センターワークショップ
- Place of Presentation
  福岡
- Year and Date
  2007-09-05
- Data Source
  KAKENHI-PROJECT-17017019
[Presentation] Network perspective in bioinformatics2007
- Author(s)
  Goto, S.
- Organizer
  Nishinomiya-Yukawa International & Interdisciplinary Symposium
- Place of Presentation
  Kyoto, Japan
- Year and Date
  2007-10-18
- Data Source
  KAKENHI-PROJECT-17017019
[Presentation] Network perspective in bioinformatics2007
- Author(s)
  Susumu Goto
- Organizer
  Nishinomiya-Yukawa International & Interdisciplinary Symposium
- Place of Presentation
  コープイン京都
- Year and Date
  2007-10-18
- Data Source
  KAKENHI-PROJECT-17017019
[Presentation] 代謝ネットワークのトポロジー解析2007
- Author(s)
  五斗進
- Organizer
  九州大学産業技術数理研究センターワークショップ
- Place of Presentation
  九州大学
- Year and Date
  2007-09-05
- Data Source
  KAKENHI-PROJECT-17017019

1. AKUTSU Tatsuya (90261859)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
2. MOCHIZUKI Atsushi (10304726)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. TOKITA Keiichirou (00263195)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. SATOU Kenji (10215783)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. HATTORI Masahiro (60372554)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
6. OKUNO Yasushi (20283666)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
7. SUGIURA Yukio (40025698)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. NAGAOKA Makoto (60314275)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. FUTAKI Shiroh (50199402)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. SAKO Yoshihiko (60153970)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. Takami Hideto (70359165)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 吉田天士 (80305490)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 神川龍馬 (40627634)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 緒方博之 (70291432)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 安田尚登 (90175646)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 奥西将之 (70373090)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. 前田広人 (80238873)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. HAYES Clair Nelson

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

Goto Susumu 五斗 進

五斗 進 ゴトウ ススム

GOTO Susumu 五斗 進

Research Projects

Research Products

Co-Researchers

Culturing strategies for uncultivated environmental microorganisms based on genome and medium information

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Comprehensive, spatiotemporal study and applied research of carboxydotrophs

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Evolutionary mechanism of antigenic variation genesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

マラリア原虫Plasmodium falciarumの疾病立過程に関する研究Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Analysis of Structure and Dynamics of Biological Information Networks

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Construction and Retrieval of Highly Integrated Biological DatabasesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Development or order-mede type artificial restriction enzymes and artificial repressers

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Discriminating the reaction types of plant type III polyketide synthases.2017

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Revealing phenotype-associated functional differences by genome-wide scan of ancient haplotype blocks.2017

Author(s)

Journal Title

NAID

Data Source

[Journal Article] Type III polyketide synthases: functional classification and phylogenomics.2017

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Systems biology approaches and tools for investigating cardiovascular disease2009

Author(s)

Journal Title

Data Source

[Journal Article] Systems biology approaches and tools for investigating cardiovascular disease2009

Author(s)

Journal Title

Data Source

[Journal Article] varDB : a pathogen-specific database of protein families involved in antigenic variation2008

Author(s)

Journal Title

Data Source

[Journal Article] KEGG Atlas mapping for global analysis of metabolic pathways2008

Author(s)

Journal Title

Data Source

[Journal Article] Prediction of missing enzyme genes in bacterial metabolic network : A reconstruction of lysine degradation pathway of Pseudomonas aeruginosa2007

Goto Susumu 五斗進

五斗進ゴトウススム

GOTO Susumu 五斗進