Okazaki Yusuke 岡崎友輔

Researcher Number	40823745
Other IDs	https://orcid.org/0000-0001-8770-2774
Affiliation (Current)	2025: 京都大学, 化学研究所, 助教
Affiliation (based on the past Project Information) *help	2021 – 2025: 京都大学, 化学研究所, 助教 2018: 産業技術総合研究所, 生物プロセス研究部門生物資源情報基盤研究グループ, 日本学術振興会特別研究員
Review Section/Research Field	Principal Investigator Basic Section 38020:Applied microbiology-related / Basic Section 38020:Applied microbiology-related / Basic Section 45040:Ecology and environment-related Except Principal Investigator Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields / Basic Section 63010:Environmental dynamic analysis-related / Forestry and Forest Products Science, Applied aquatic science, and related fields
Keywords	Principal Investigator メタゲノム / 細菌 / ウイルス / 琵琶湖 / シングルセルゲノム解析 / 微生物生態学 Except Principal Investigator 細菌 / 琵琶湖 / 微生物 / 有機物動態 … More / 窒素循環 / 溶存有機物 / 湖沼深水層 / 微生物ループ / 低分子 / 分子多様性 / 長期残存性 / 水圏有機地球化学 / 分子複雑性 / FT-ICR MS / 複雑多様性 / 深海 / 進化 / 生態 / 無光層 / 巨大ウイルス / 沈降粒子 / 高分子溶存有機物 / D-アミノ酸 / 宿主特異性 / 糖鎖 / 長鎖反復アミノ酸長鎖配列 / 高度アミノ酸反復領域 / 生え戻り現象 / クローン多様性 / 感受性 / 特異的感染性 / 二本鎖DNAウイルスHaV / 赤潮 / 長鎖反復配列 / 巨大蛋白質 / 糖鎖認識機構 / ウイルス / 赤潮プランクトン / 窒素同位体 / アミノ酸 / 食物連鎖 / 群集ゲノム解析 / 鞭毛虫 / 原生生物 / 微生物群集組成 / ピコ植物プランクトン / キネトプラスチド鞭毛虫 / CL500-11細菌 / 深水層 / 湖沼 Less

湖の深水層で優占する難培養細菌群の効率的単離法の確立とその生理生態の実験的検証Principal Investigator
- Principal Investigator
  
  岡崎友輔
- Project Period (FY)
  2025 – 2027
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 38020:Applied microbiology-related
- Research Institution
  Kyoto University
湖沼で優占する細菌の難培養性の背景にある適応進化の解明Principal Investigator
- Principal Investigator
  
  岡崎友輔
- Project Period (FY)
  2025 – 2026
- Research Category
  
  Grant-in-Aid for JSPS Fellows
- Review Section
  
  Basic Section 38020:Applied microbiology-related
- Research Institution
  Kyoto University
Exploring the potential of bacteria-derived submicron particles to drive biological pumps
- Principal Investigator
  
  山口保彦
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 63010:Environmental dynamic analysis-related
- Research Institution
  Lake Biwa Environmental Research Institute
Who is the host of uncultivated viruses? Linking viral and bacterial genomes in the environmentPrincipal Investigator
- Principal Investigator
  
  岡崎友輔
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 45040:Ecology and environment-related
- Research Institution
  Kyoto University
Molecular ecological mechanism of bloom disintegration by viral infection
- Principal Investigator
  
  長崎慶三
- Project Period (FY)
  2022 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields
- Research Institution
  Kochi University
Unveiling the organic matter dynamics functioning in lake hypolimnion
- Principal Investigator
  
  中野伸一
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields
- Research Institution
  Kyoto University
Ecology of giant viruses inhabiting the aphotic zone of the sea
- Principal Investigator
  
  緒方博之
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields
- Research Institution
  Kyoto University
Elucidating the molecular heterogeneity of dissolved organic matter that governs its long-term persistence
- Principal Investigator
  
  木田森丸
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 63010:Environmental dynamic analysis-related
- Research Institution
  Kobe University
Microbial Nitrogen Pump: Bacterial semi-labile dissolved organic nitrogen as a nutrient transport pathway in aquatic systems
- Principal Investigator
  
  山口保彦
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 63010:Environmental dynamic analysis-related
- Research Institution
  Lake Biwa Environmental Research Institute
Research on microbial loop unique to lake hypolimnion
- Principal Investigator
  
  Nakano Shin-ichi
- Project Period (FY)
  2017 – 2018
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Research Field
  
  Forestry and Forest Products Science, Applied aquatic science, and related fields
- Research Institution
  Kyoto University

All 2024 2023 2022 2021 2018 2017

All Journal Article Presentation

[Journal Article] Frontiers of lake microbial ecology opened up by new technologies.2024
- Author(s)
  岡崎友輔
- Journal Title
  
  Japanese Journal of Limnology (Rikusuigaku Zasshi)
  
  Volume: 85 Issue: 1 Pages: 1-24
- DOI
  10.3739/rikusui.85.1
- ISSN
  0021-5104, 1882-4897
- Year and Date
  2024-02-25
- Language
  Japanese
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K15182
[Journal Article] DiGAlign: Versatile and Interactive Visualization of Sequence Alignment for Comparative Genomics2024
- Author(s)
  Nishimura Yosuke、Yamada Kohei、Okazaki Yusuke、Ogata Hiroyuki
- Journal Title
  
  Microbes and Environments
  
  Volume: 39 Issue: 1 Pages: n/a
- DOI
  10.1264/jsme2.ME23061
- ISSN
  1342-6311, 1347-4405
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K15089, KAKENHI-PROJECT-22K15182, KAKENHI-PUBLICLY-22H05714, KAKENHI-PROJECT-22H00384
[Journal Article] A Fast and Easy Method to Co-extract DNA and RNA from an Environmental Microbial Sample2023
- Author(s)
  Okazaki Yusuke、Nguyen Tuyen Thi、Nishihara Arisa、Endo Hisashi、Ogata Hiroyuki、Nakano Shin-ichi、Tamaki Hideyuki
- Journal Title
  
  Microbes and Environments
  
  Volume: 38 Issue: 1 Pages: n/a
- DOI
  10.1264/jsme2.ME22102
- ISSN
  1342-6311, 1347-4405
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K15182, KAKENHI-PROJECT-18H05295, KAKENHI-PROJECT-19H05667, KAKENHI-PROJECT-22H00384, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00382
[Journal Article] A rapid genome‐wide analysis of isolated giant viruses using <scp>MinION</scp> sequencing2023
- Author(s)
  Hikida Hiroyuki、Okazaki Yusuke、Zhang Ruixuan、Nguyen Thi Tuyen、Ogata Hiroyuki
- Journal Title
  
  Environmental Microbiology
  
  Volume: 25 Issue: 11 Pages: 2621-2635
- DOI
  10.1111/1462-2920.16476
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K15175, KAKENHI-PROJECT-22H00384
[Journal Article] Long-Read-Resolved, Ecosystem-Wide Exploration of Nucleotide and Structural Microdiversity of Lake Bacterioplankton Genomes2022
- Author(s)
  Okazaki Yusuke、Nakano Shin-ichi、Toyoda Atsushi、Tamaki Hideyuki
- Journal Title
  
  mSystems
  
  Volume: 7 Issue: 4 Pages: 1-16
- DOI
  10.1128/msystems.00433-22
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K15182, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-18H05295, KAKENHI-PROJECT-22H00382, KAKENHI-PROJECT-21H03584
[Journal Article] The Broad Habitat Spectrum of the CL500-11 Lineage (Phylum Chloroflexi), a Dominant Bacterioplankton in Oxygenated Hypolimnia of Deep Freshwater Lakes2018
- Author(s)
  Okazaki Yusuke、Salcher Michaela M.、Callieri Cristiana、Nakano Shin-ichi
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 9 Pages: 2891-2891
- DOI
  10.3389/fmicb.2018.02891
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18J00300, KAKENHI-PROJECT-17K19289
[Journal Article] Hidden in plain sight?highly abundant and diverse planktonic freshwater Chloroflexi2018
- Author(s)
  Mehrshad Maliheh、Salcher Michaela M、Okazaki Yusuke、Nakano Shin-ichi、?imek Karel、Andrei Adrian-Stefan、Ghai Rohit
- Journal Title
  
  Microbiome
  
  Volume: 6 Issue: 1 Pages: 176-176
- DOI
  10.1186/s40168-018-0563-8
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18J00300, KAKENHI-PROJECT-17K19289
[Journal Article] Long-term Changes in Water Quality of Lake Biwa with Special Reference to Organic Matter Dynamics and Microbial Ecology2018
- Author(s)
  Shin-ichi Nakano, Kazuhide Hayakawa, Yoshikuni Hodoki, Yusuke Okazaki, Indranil Mukherjee, Shoji D. Thottathil, Hiroyuki Takasu, Shohei Fujinaga
- Journal Title
  
  Proceedings of the 17th World Lake Conference
  
  Volume: 1 Pages: 304-306
- Data Source
  KAKENHI-PROJECT-17K19289
[Journal Article] Long-term changes in water quality in Lake Biwa with special reference to organic matter dynamics, microbial ecology and diversity2017
- Author(s)
  Nakano S, K Hayakawa, Y Hodoki, Y Okazaki, I Mukherjee, SD Thottathil, H Takasu, S Fujinaga
- Journal Title
  
  Proceedings of the second International Conference on Life Science and Biotechnology (ICOLIB)
  
  Volume: 2
- Data Source
  KAKENHI-PROJECT-17K19289
[Presentation] Discovery of endogenous giant virus in arbuscular mycorrhizal fungi: implications of a dsDNA virus infection in fungi2023
- Author(s)
  Zhao H., Zhang R., Wu J., Meng L., Okazaki Y., Ogata H.
- Organizer
  微生物生態学会第36回大会
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] Towards understanding the potential host of giant viruses in mesopelagic layer.2023
- Author(s)
  Liu W., Neches R.Y., Okazaki Y., Endo H., Ogata H.
- Organizer
  第36回日本微生物学会大会
- Data Source
  KAKENHI-PROJECT-22H00385
[Presentation] ingle-cell genomics uncovers microbial genomic microdiversity and virus-host interactions that had eluded high-resolution metagenomics2023
- Author(s)
  Okazaki Y, Nishikawa Y, Wagatsuma R, Takeyama H, Nakano S.
- Organizer
  The Local Pangenome workshop
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H00382
[Presentation] A large gap between the presence and activity of microeukaryotes in a deep sea environment2023
- Author(s)
  Liu W., Neches R.Y., Okazaki Y., Endo H., Ogata H.
- Organizer
  OceanDNAテック2023
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] Exploring the diversity and dynamics of giant viruses in a deep lake through long-read metagenomics2023
- Author(s)
  Zhang L., Meng L., Fang Y., Ogata H., Okazaki Y.
- Organizer
  微生物生態学会第36回大会
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] FT-ICR MS による琵琶湖溶存有機物の分子組成の時空間分布：その多様度に着目して2023
- Author(s)
  木田森丸, 大平麻有里, 山口保彦, 岡崎友輔, 西村裕志
- Organizer
  日本腐植物質学会第39回講演会
- Data Source
  KAKENHI-PROJECT-23K24987
[Presentation] Cryptic cycling of high molecular weight dissolved organic matter in the hypolimnion of a deep lake2023
- Author(s)
  Yamaguchi, Y. T., Okazaki, Y., Shimotori, K., Imai, A., and Hayakawa K.
- Organizer
  ASLO 2023 Aquatic Sciences Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K24987
[Presentation] Single cell genomics uncovered uncultured virus-host links in a deep freshwater lake2023
- Author(s)
  Yusuke Okazaki, Yohei Nishikawa, Ryota Wagatsuma, Haruko Takeyama, Shin-ichi Nakano
- Organizer
  Symposium of Aquatic Microbial Ecology (SAME17)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15182
[Presentation] Single cell genomics uncovered uncultured virus-host links in a deep freshwater lake2023
- Author(s)
  Okazaki Y, Nishikawa Y, Wagatsuma R, Takeyama H, Nakano S.
- Organizer
  Symposium of Aquatic Microbial Ecology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H00382
[Presentation] High-resolution microbial eco-genomics in deep freshwater lakes2023
- Author(s)
  Yusuke Okazaki
- Organizer
  13th Asian Symposium on Microbial Ecology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15182
[Presentation] Single-cell genomics uncovers microbial genomic microdiversity and virus-host interactions that had eluded high-resolution metagenomics2023
- Author(s)
  Yusuke Okazaki, Yohei Nishikawa, Ryota Wagatsuma, Haruko Takeyama, Shin-ichi Nakano
- Organizer
  The Local Pangenome workshop
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15182
[Presentation] 大水深淡水湖を対象とした微生物網羅的環境ゲノムデータベースの構築2023
- Author(s)
  岡崎友輔, 大八木英夫, 程木義邦, 知北和久, 齋藤圭, 中野伸一
- Organizer
  日本陸水学会第87回大会
- Data Source
  KAKENHI-PROJECT-22K15182
[Presentation] Towards understanding the potential host of giant viruses in mesopelagic layer2023
- Author(s)
  Liu W., Neches R.Y., Okazaki Y., Endo H., Ogata H.
- Organizer
  微生物生態学会第36回大会
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] A large gap between the presence and activity of microeukaryotes in a deep sea environment.2023
- Author(s)
  Liu W., Neches R.Y., Okazaki Y., Endo H., Ogata H.
- Organizer
  OceanDNAテック2023
- Data Source
  KAKENHI-PROJECT-22H00385
[Presentation] Cryptic cycling of high molecular weight dissolved organic matter in the hypolimnion of a deep lake2023
- Author(s)
  Yamaguchi, Y. T., Okazaki, Y., Shimotori, K., Imai, A., Hayakawa K.
- Organizer
  ASLO 2023 Aquatic Sciences Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H00382
[Presentation] High-resolution microbial eco-genomics in deep freshwater lakes2023
- Author(s)
  Okazaki Y.
- Organizer
  13th Asian Symposium on Microbial Ecology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H00382
[Presentation] Rapid characterization of novel giant viruses using nanopore sequencing.2022
- Author(s)
  Hikida H., Okazaki Y., Zhang R., Ogata H.
- Organizer
  VoM 2022 Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] "湖の微生物生態系”を対象としたゲノム・多型・遺伝子発現の網羅的比較解析2022
- Author(s)
  岡崎友輔, 中野伸一, 豊田敦, 玉木秀幸
- Organizer
  日本微生物生態学会第35回大会
- Data Source
  KAKENHI-PROJECT-22K15182
[Presentation] Long-read-resolved, ecosystem-wide exploration of nucleotide and structural microdiversity of lake bacterioplankton genomes2022
- Author(s)
  Okazaki Y, Nakano S, Toyoda A, Tamaki H.
- Organizer
  International 18th International Symposium on Microbial Ecology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H00382
[Presentation] Long-read-resolved, ecosystem-wide exploration of nucleotide and structural microdiversity of lake bacterioplankton genomes2022
- Author(s)
  Okazaki Y, Nakano S, Toyoda A, Tamaki H
- Organizer
  International 18th International Symposium on Microbial Ecology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15182
[Presentation] Genome-resolved metagenomics reveals instra-species genetic diversity of giant viruses.2022
- Author(s)
  Yue Fang, Lingjie Meng, Xia Jun, Hiroyuki Ogata, Yusuke Okazaki, Hisashi Endo, Keizo Ngasaki, Yasushiro Gotoh, Tetsuya Hayashi.
- Organizer
  第45回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H00385
[Presentation] “湖の微生物生態系”を対象としたゲノム・多型・遺伝子発現の網羅的比較解析2022
- Author(s)
  岡崎友輔, 中野伸一, 豊田敦, 玉木秀幸
- Organizer
  日本微生物生態学会第35回大会
- Data Source
  KAKENHI-PROJECT-22H00382
[Presentation] 湖沼深水層の細菌の生態学2022
- Author(s)
  岡崎友輔, 中野伸一
- Organizer
  日本陸水学会第86回大会
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] 湖沼深水層の細菌の生態学2022
- Author(s)
  岡崎友輔, 中野伸一, 豊田敦, 玉木秀幸
- Organizer
  日本陸水学会第86回兵庫大会
- Data Source
  KAKENHI-PROJECT-22H00382
[Presentation] 湖沼深水層の細菌の生態学2022
- Author(s)
  岡崎友輔, 中野伸一
- Organizer
  日本陸水学会第86回大会
- Data Source
  KAKENHI-PROJECT-22K15182
[Presentation] Long-read-resolved, ecosystem-wide exploration of nucleotide and structural microdiversity of lake bacterioplankton genomes2022
- Author(s)
  Okazaki Y, Nakano S, Toyoda A, Tamaki H.
- Organizer
  International 18th International Symposium on Microbial Ecology (ISME18)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] The short-term variation of virus community in an enclosed bay of Japan.2022
- Author(s)
  Jun Xia, Yue Fang, Lingjie Meng, Qingwei Yang, Yusuke Okazaki, Takashi Yoshida, Keizo Nagasaki, Hisashi Endo, Hiroyuki Ogata.
- Organizer
  日本微生物生態学会第35回年次大会
- Data Source
  KAKENHI-PROJECT-22H00385
[Presentation] The short-term variation of virus community in an enclosed bay of Japan2022
- Author(s)
  Xia J., Fang Y., Yang Q., Okazaki Y., Yoshida T., Nagasaki K., Hisashi E., Ogata H.
- Organizer
  35th JSME annual meeting
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] 赤潮藻ヘテロシグマに感染するウイルスHaVの感染をめぐる特殊性と複雑性.2022
- Author(s)
  長﨑慶三, 船岳祐作, 廣本春奈, 森本大地, 高橋迪子, 前田広道, 花﨑和弘, 和田啓, 遠藤寿, 岡崎友輔, 緒方博之.
- Organizer
  令和5年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-22H00385
[Presentation] “湖の微生物生態系”を対象としたゲノム・多型・遺伝子発現の網羅的比較解析2022
- Author(s)
  岡崎友輔, 中野伸一, 豊田敦, 玉木秀幸
- Organizer
  日本微生物生態学会第35回大会
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] 湖沼深水層の細菌の生態学2022
- Author(s)
  岡崎友輔, 中野伸一
- Organizer
  日本陸水学会第86回大会
- Data Source
  KAKENHI-PROJECT-23K24987
[Presentation] Detection of horizontal gene transfers among giant viruses2022
- Author(s)
  Wu J., Meng L., Gaia M., Hikida H., Okazaki Y., Endo H., Ogata H.
- Organizer
  35th JSME annual meeting
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] Spatio-temporal community genome dynamics of giant viruses in a deep lake uncovered by long-read metagenomics2022
- Author(s)
  Zhang L., Fang Y., Ogata H., Okazaki H.
- Organizer
  35th JSME annual meeting
- Data Source
  KAKENHI-PROJECT-22H00384
[Presentation] 琵琶湖の水質と生態系の保全にかかる有機物循環の解析：溶存有機物の分子サイズ別分解速度と湖内物質循環への寄与2021
- Author(s)
  山口保彦, 霜鳥孝一, 今井章雄, 岡崎友輔, 尾原禎幸, 中村光穂, 七里将一, 岡本高弘, 早川和秀
- Organizer
  2021年度日本腐植物質学会第37回講演会
- Invited
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] Biodegradation kinetics and molecular-size distribution of freshwater dissolved organic matter during long-term incubations2021
- Author(s)
  Yamaguchi, Y. T., Shimotori, K., Imai, A., Okazaki, Y., Ohara, T., Nakamura, M., Hichiri, S., Okamoto, T., and Hayakawa K.
- Organizer
  ASLO 2021 Aquatic Sciences Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] Ecogenomics of bacteria and viruses in the water column of Lake Biwa2021
- Author(s)
  Okazaki, Y.
- Organizer
  SIL 2021: 35th Congress of the International Society of Limnology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] 湖と河川における溶存有機物の分子サイズ別の生分解速度2021
- Author(s)
  山口保彦, 霜鳥孝一, 今井章雄, 岡崎友輔, 尾原禎幸, 中村光穂, 七里将一, 岡本高弘, 早川和秀
- Organizer
  日本地球惑星科学連合2021年大会
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] Biodegradation kinetics of different molecular-size classes of freshwater dissolved organic matter during long-term incubations2021
- Author(s)
  Yamaguchi, Y. T., Shimotori, K., Imai, A., Okazaki, Y., Ohara, T., Nakamura, M., Hichiri, S., Okamoto, T., and Hayakawa K.
- Organizer
  SIL 2021: 35th Congress of the International Society of Limnology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] ロングリード解析で拓くメタゲノムビニングの限界と環境細菌ゲノムの微小多様性2021
- Author(s)
  岡崎友輔, 中野伸一, 豊田敦, 玉木秀幸
- Organizer
  日本微生物生態学会第34回大会
- Data Source
  KAKENHI-PROJECT-21H03584
[Presentation] 琵琶湖の底にある、ちょっと変わった微生物ループ2018
- Author(s)
  中野伸一、早川和秀、程木義邦、岡崎友輔、I. Mukherjee、S. D. Thottathil、高巣裕之
- Organizer
  日本生態学会第65回札幌大会
- Data Source
  KAKENHI-PROJECT-17K19289
[Presentation] Long-term Changes in Water Quality of Lake Biwa with Special Reference to Organic Matter Dynamics and Microbial Ecology2018
- Author(s)
  Shin-ichi Nakano, Kazuhide Hayakawa, Yoshikuni Hodoki, Yusuke Okazaki, Indranil Mukherjee, Shoji D. Thottathil, Hiroyuki Takasu, Shohei Fujinaga
- Organizer
  Proceedings of the 17th World Lake Conference
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K19289
[Presentation] メタゲノム解析で明らかにする湖の微生物生態系2018
- Author(s)
  岡崎友輔
- Organizer
  第83回日本陸水学会岡山大会
- Data Source
  KAKENHI-PROJECT-17K19289
[Presentation] Long-term changes in water quality in Lake Biwa with special reference to organic matter dynamics, microbial ecology and diversity2017
- Author(s)
  Nakano S, K Hayakawa, Y Hodoki, Y Okazaki, I Mukherjee, SD Thottathil, H Takasu, S Fujinaga
- Organizer
  The second International Conference on Life Science and Biotechnology (ICOLIB)
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K19289

1. 山口保彦 (50726221)

# of Collaborated Projects: 4 results

# of Collaborated Products: 7 results
2. Nakano Shin-ichi (50270723)

# of Collaborated Projects: 3 results

# of Collaborated Products: 14 results
3. 早川和秀 (80291178)

# of Collaborated Projects: 3 results

# of Collaborated Products: 5 results
4. 布施泰朗 (90303932)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
5. 木庭啓介 (90311745)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
6. 緒方博之 (70291432)

# of Collaborated Projects: 2 results

# of Collaborated Products: 13 results
7. 吉田天士 (80305490)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
8. 遠藤寿 (80795055)

# of Collaborated Projects: 2 results

# of Collaborated Products: 8 results
9. Hodoki Yoshikuni (60632122)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
10. 長崎慶三 (00222175)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
11. 前田広道 (20437734)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
12. 花崎和弘 (30240790)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 高橋迪子 (40868189)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
14. 和田啓 (80379304)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
15. 初雪 (50983889)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 沈尚 (20882426)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. 木田森丸 (70903730)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
18. KIM SUHYUN

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. 疋田弘之

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Okazaki Yusuke 岡崎 友輔

Research Projects

Research Products

Co-Researchers

湖の深水層で優占する難培養細菌群の効率的単離法の確立とその生理生態の実験的検証Principal Investigator

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湖沼で優占する細菌の難培養性の背景にある適応進化の解明Principal Investigator

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Exploring the potential of bacteria-derived submicron particles to drive biological pumps

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Who is the host of uncultivated viruses? Linking viral and bacterial genomes in the environmentPrincipal Investigator

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Molecular ecological mechanism of bloom disintegration by viral infection

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Unveiling the organic matter dynamics functioning in lake hypolimnion

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Ecology of giant viruses inhabiting the aphotic zone of the sea

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Elucidating the molecular heterogeneity of dissolved organic matter that governs its long-term persistence

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Microbial Nitrogen Pump: Bacterial semi-labile dissolved organic nitrogen as a nutrient transport pathway in aquatic systems

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Research on microbial loop unique to lake hypolimnion

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[Journal Article] Frontiers of lake microbial ecology opened up by new technologies.2024

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[Journal Article] DiGAlign: Versatile and Interactive Visualization of Sequence Alignment for Comparative Genomics2024

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[Journal Article] A Fast and Easy Method to Co-extract DNA and RNA from an Environmental Microbial Sample2023

Okazaki Yusuke 岡崎友輔