Ishikawa Shumpei 石川俊平

… Alternative Names

ISHIKAWA Shumpei 石川俊平

Less

Researcher Number	50418638
Other IDs
Affiliation (Current)	2025: 東京大学, 大学院医学系研究科(医学部), 教授
Affiliation (based on the past Project Information) *help	2018 – 2024: 東京大学, 大学院医学系研究科(医学部), 教授 2012 – 2018: 東京医科歯科大学, 難治疾患研究所, 教授 2012: 東京大学, 医学部, 准教授 2010 – 2011: 東京大学, 医学系研究科, 准教授 2009 – 2011: The University of Tokyo, 大学院・医学系研究科, 准教授 … More 2009: 東京大学, 大学院・医学研究科, 准教授 2007 – 2008: The University of Tokyo, 大学院・医学系研究科, 助教 2007: The University of Tokyo, Department of Pathology, Assistant Professor 2006: 東京大学, 先端科学技術研究センター, 産学官連携研究員(特任助手) 2005: 東京大学, 先端科学技術研究センター, 科学技術振興特任教員 Less
Review Section/Research Field	Principal Investigator Medical genome science / Biological Sciences / Broad Section I / Complex systems / 基礎ゲノム科学 Except Principal Investigator Applied genomics / Basic Section 56010:Neurosurgery-related / Basic Section 56050:Otorhinolaryngology-related / Medical genome science / Urology … More / Laboratory animal science / Complex systems / Human pathology / Digestive surgery Less
Keywords	Principal Investigator ゲノム / マイクロアレイ / 治療標的 / がん / 病理画像 / 人工知能 / 胃癌 / ゲノム創薬 / 病理学 / 癌 … More / 治療薬 / ゲノミクス / バイオマーカー / 薬剤反応性 / シグナル伝達 / 薬剤応答性 / 並列型シーケンサー / コピー数 / LOH / アレル不均衡 / 癌ゲノム / ヒトゲノム / コピー数多型 … More Except Principal Investigator ゲノム / がん / 微小環境 / クロマチン免疫沈降 / DNAメチル化 / クロマチン / エピゲノム / マイクロアレイ / タンパク質構造解析 / 分子標的治療 / モデル動物 / 血管内皮細胞 / 血管奇形 / バイオマーカー / 腫瘍微小環境 / 頭頸部癌 / 遺伝子変異 / 遺伝子解析 / ニボルマブ / 再発転移頭頸部癌 / エクソーム / 幹細胞 / 進化 / 発現制御 / 腫瘍内多様性 / ノンコーディングRNA / ドライバー変異 / 可塑性 / 不均一性 / クローン進化 / miRNA / 肥満細胞 / 排尿機能学 / 泌尿器科学 / ハンナ型間質性膀胱炎 / 免疫レパトワ解析 / ゲノミクス解析 / マイクロRNA / レパートリー解析 / RNA-seq / 膀胱痛症候群 / 間質性膀胱炎 / 相互作用 / NOGマウス / がんゼノグラフト / 幹細胞相互作用 / 幹細胞維持微小環境 / がんゼノ患者 / 新規分子標的薬 / がん幹細胞維持分子 / 抗がん剤治療モデル / がんゼノ患者モデル / インタラクトーム解析 / がん微小環境 / 個別化医療 / 癌ゼノ患者 / 患者由来ゼノグラフト / 免疫不全マウス / インタラクトーム / 幹細胞ーニッチ相互作用 / がん幹細胞 / Chromatin immunoprecipitation / DNA methylation / tiling array / copy number variation / transcription / genome / 臨床ゲノム学 / ChIP on Chip解析 / アレル別コピー数 / 発現プロファィル解析 / インスレータ / クロマチン修飾 / メチル化 / 染色体変異 / ゲノムコピー数 / タイリングアレイ / コピー数多型 / 転写 / 腫瘍学 / 遺伝統計学 / バイオインフォマティクス / ゲノム科学 / システム生物学 / 特発性肺線維症 / 前癌状態 / 炎症 / 肺癌 / 肺がん / エビゲノム / 機能ゲノミクス / 胃癌 / 膵臓がん / 肝細胞癌 / 転写制御 / 病理学 / 癌 / 遺伝子 Less

A New Definition of Gastric Cancer Diversity through Quantitative Integration of histological and Genomic InformationPrincipal Investigator
- Principal Investigator
  
  石川俊平
- Project Period (FY)
  2022 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Review Section
  
  Broad Section I
- Research Institution
  The University of Tokyo
Analysis of novel vascular malformation causative gene
- Principal Investigator
  
  齊藤延人
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 56010:Neurosurgery-related
- Research Institution
  The University of Tokyo
Study on Biomarkers for Optimal Administration of Nivolumab for Recurrent Metastatic Head and Neck Cancer
- Principal Investigator
  
  Asakage Takahiro
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 56050:Otorhinolaryngology-related
- Research Institution
  Tokyo Medical and Dental University
Comprehensive understanding of interstitial signals between cancer and interstitiumPrincipal Investigator
- Principal Investigator
  
  Ishikawa Shumpei
- Project Period (FY)
  2016 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Medical genome science
- Research Institution
  The University of Tokyo
  Tokyo Medical and Dental University
Investigation of pathophysiologies by genomic analyses in interstitial cystitis
- Principal Investigator
  
  Homma Yukio
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Urology
- Research Institution
  The University of Tokyo
Multidimensional Analysis of Cancer Stem Cell - Microenvironment Interaction with Patient Derived Xenografts (PDX) or Cancer Xenopatients
- Principal Investigator
  
  NAKAMURA Masato
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Laboratory animal science
- Research Institution
  Tokai University
Sequence-based Cancer-stromal Interactome Analysis for Accessible Therapeutic TargetsPrincipal Investigator
- Principal Investigator
  
  SHUMPEI ISHIKAWA
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Young Scientists (A)
- Research Field
  
  Medical genome science
- Research Institution
  Tokyo Medical and Dental University
An integrated genomic analysis on evolution of cancer cell population
- Principal Investigator
  
  Aburatani Hiroyuki
- Project Period (FY)
  2012 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Medical genome science
- Research Institution
  The University of Tokyo
Systems Cancer Research Executive Committee
- Principal Investigator
  
  MIYANO SATORU
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  The University of Tokyo
Cancer genomics analysis and biomarker discovery under therapeutic modificationPrincipal Investigator
- Principal Investigator
  
  ISHIKAWA Shumpei
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Tokyo Medical and Dental University
  The University of Tokyo
疾患関連コピー数多型解析の基盤整備Principal Investigator
- Principal Investigator
  
  石川俊平
- Project Period (FY)
  2008 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Integrated analysis of transcriptional regulation in cancer
- Principal Investigator
  
  ABURATANI Hiroyuki
- Project Period (FY)
  2008 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Applied genomics
- Research Institution
  The University of Tokyo
Analysis for carcinogenesis of lung cancer in idiopathic pulmonary fibrosis by inflammation and precancerous change
- Principal Investigator
  
  OTA Satoshi
- Project Period (FY)
  2008 – 2010
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Human pathology
- Research Institution
  The University of Tokyo
Copy number analysis for stepwise hepatocarcinogenesis using early hepatocellular carcinoma
- Principal Investigator
  
  MIDORIKAWA Yutaka
- Project Period (FY)
  2007 – 2008
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Digestive surgery
- Research Institution
  Teikyo University
ヒト疾患関連コピー数多型解析Principal Investigator
- Principal Investigator
  
  石川俊平
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
癌のアレルコピー数不均衡解析による機能性ハプロタイプの同定Principal Investigator
- Principal Investigator
  
  石川俊平
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  The University of Tokyo
Systemic Analysis of transcriptional network in cancer
- Principal Investigator
  
  ABURATANI Hiroyuki
- Project Period (FY)
  2004 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Applied genomics
- Research Institution
  The University of Tokyo

[Book] 疾患遺伝子の探索と超高速シーケンシング「コピー数多型(CNV)と疾患解析」2009
- Author(s)
  石川俊平、梅田高呂
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-20018005
[Book] ヒトゲノムのコピー数多型 : CNV2007
- Author(s)
  石川俊平, 油谷浩幸
- Total Pages
  209
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-18018007
[Journal Article] Multiancestry genomic and transcriptomic analysis of gastric cancer2023
- Author(s)
  Totoki Y, Saito-Adachi M, Shiraishi Y, Komura D, Nakamura H, Suzuki A, Tatsuno K, Rokutan H, Hama N, Yamamoto S, Ono H, Arai Y, Hosoda F, Katoh H, et al.
- Journal Title
  
  Nature Genetics
  
  Volume: 55 Issue: 4 Pages: 581-594
- DOI
  10.1038/s41588-023-01333-x
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K06937, KAKENHI-PROJECT-22H04990, KAKENHI-PROJECT-19H01031, KAKENHI-PROJECT-20K07378, KAKENHI-PROJECT-21K06882, KAKENHI-PROJECT-20KK0174, KAKENHI-PLANNED-19H05744, KAKENHI-ORGANIZER-22H05021, KAKENHI-PROJECT-23K21431
[Journal Article] Stomach encyclopedia: Combined single-cell and spatial transcriptomics reveal cell diversity and homeostatic regulation of human stomach2023
- Author(s)
  Tsubosaka Ayumu、Komura Daisuke、Kakiuchi Miwako、Katoh Hiroto、Onoyama Takumi、Yamamoto Asami、Abe Hiroyuki、Seto Yasuyuki、Ushiku Tetsuo、Ishikawa Shumpei
- Journal Title
  
  Cell Reports
  
  Volume: 42 Issue: 10 Pages: 113236-113236
- DOI
  10.1016/j.celrep.2023.113236
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22KJ1012, KAKENHI-PROJECT-21K06882, KAKENHI-PROJECT-22H04990, KAKENHI-PROJECT-19H01032
[Journal Article] Aberrant Cadherin11 expression predicts distant metastasis of gastric cancer2023
- Author(s)
  Mita Hideaki, Katoh Hiroto, Komura Daisuke, Kakiuchi Miwako, Abe Hiroyuki, Rokutan Hirofumi, Yagi Koichi, Nomura Sachiyo, Ushiku Tetsuo, Seto Yasuyuki, Ishikawa Shumpei.
- Journal Title
  
  Pathology - Research and Practice
  
  Volume: 242 Pages: 154294-154294
- DOI
  10.1016/j.prp.2022.154294
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K07378, KAKENHI-PROJECT-22H04990, KAKENHI-PROJECT-19H01032, KAKENHI-PROJECT-20KK0174, KAKENHI-ORGANIZER-22H05021
[Journal Article] Restaining-based annotation for cancer histology segmentation to overcome annotation-related limitations among pathologists.2023
- Author(s)
  Komura D, Onoyama T, Shinbo K, Odaka H, Hayakawa M, Ochi M, Herdiantoputri RR, Endo H, Katoh H, Ikeda T, Ushiku T, Ishikawa S.
- Journal Title
  
  Patterns
  
  Volume: 4(2) Issue: 2 Pages: 100688-100688
- DOI
  10.1016/j.patter.2023.100688
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04990, KAKENHI-PROJECT-23K21859
[Journal Article] Tumor DNA in Peritoneal Lavage as a Novel Biomarker for Predicting Peritoneal Recurrence in Patients With Gastric Cancer.2023
- Author(s)
  Yukawa N, Yamada T, Aoyama T, Woo T, Ueda K, Mastuda A, Hara K, Kazama K, Tamagawa H, Sato T, Oshima T, Suzuki A, Aburatani H, Ishikawa S, Saito A, Masuda M, Yoshida H, Rino Y.
- Journal Title
  
  Anticancer Res.
  
  Volume: 43(5) Issue: 5 Pages: 2069-2076
- DOI
  10.21873/anticanres.16367
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K07465, KAKENHI-PROJECT-22K08811, KAKENHI-PROJECT-22H04990
[Journal Article] High expression levels of polymeric immunoglobulin receptor are correlated with chemoresistance and poor prognosis in pancreatic cancer2020
- Author(s)
  Ohkuma Ryotaro、Yoshimura Kiyoshi、他
- Journal Title
  
  Oncology Reports
  
  Volume: 44 Issue: 1 Pages: 252-262
- DOI
  10.3892/or.2020.7610
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K07320, KAKENHI-PROJECT-19K12848, KAKENHI-PROJECT-20K17001, KAKENHI-PROJECT-16H02481
[Journal Article] Focal adhesion ribonucleoprotein complex proteins are major humoral cancer antigens and targets in autoimmune diseases2020
- Author(s)
  Atsumi Shinichiro、Katoh Hiroto、Komura Daisuke、Hashimoto Itaru、Furuya Genta、Koda Hirotomo、Konishi Hiroki、Suzuki Ryohei、Yamamoto Asami、Yuba Satsuki、Abe Hiroyuki、Rino Yasushi、Oshima Takashi、Ushiku Tetsuo、Fukayama Masashi、Seto Yasuyuki、Ishikawa Shumpei
- Journal Title
  
  Communications Biology
  
  Volume: 3 Issue: 1 Pages: 588-588
- DOI
  10.1038/s42003-020-01305-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H01032, KAKENHI-PROJECT-16H02481
[Journal Article] High levels of human epididymis protein 4 mRNA and protein expression are associated with chemoresistance and a poor prognosis in pancreatic cancer2020
- Author(s)
  Ohkuma Ryotaro、Yoshimura Kiyoshi、他
- Journal Title
  
  International Journal of Oncology
  
  Volume: 58 Issue: 1 Pages: 57-69
- DOI
  10.3892/ijo.2020.5147
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K07320, KAKENHI-PROJECT-19K12848, KAKENHI-PROJECT-16H02481
[Journal Article] Novel targets identified by integrated cancer-stromal interactome analysis of pancreatic adenocarcinoma.2020
- Author(s)
  Hiroshima Y, Kasajima R, Kimura Y, Komura D, Ishikawa S, Ichikawa Y, Bouvet M, Yamamoto N, Oshima T, Morinaga S, Singh SR, Hoffman RM, Endo I, Miyagi Y.
- Journal Title
  
  Cancer Lett.
  
  Volume: 469 Pages: 217-227
- DOI
  10.1016/j.canlet.2019.10.031
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02481, KAKENHI-PROJECT-17H04992, KAKENHI-PROJECT-19K09181, KAKENHI-PROJECT-19H03774
[Journal Article] Defined lifestyle and germline factors predispose Asian populations to gastric cancer2020
- Author(s)
  Suzuki A, Katoh H, Komura D, Kakiuchi M, Tagashira A, Yamamoto S, Tatsuno K, Ueda H, Nagae G, Fukuda S, Umeda T, Totoki Y, Abe H, Ushiku T, Matsuura T, Sakai E, Ohshima T, Nomura S, Seto Y, Shibata T, Rino Y, Nakajima A, Fukayama M, Ishikawa S, Aburatani H.
- Journal Title
  
  Science Advances
  
  Volume: 6 Issue: 19 Pages: 9778-9778
- DOI
  10.1126/sciadv.aav9778
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H01031, KAKENHI-PROJECT-17K07195, KAKENHI-PROJECT-18K06983, KAKENHI-PROJECT-18K07963, KAKENHI-PROJECT-16H02481
[Journal Article] The first case of gastric carcinoma with NTRK rearrangement: identification of a novel ATP1B-NTRK1 fusion.2020
- Author(s)
  Shinozaki-Ushiku A, Ishikawa S, Komura D, Seto Y, Aburatani H, Ushiku T.
- Journal Title
  
  Gastric Cancer.
  
  Volume: 23 Issue: 5 Pages: 944-947
- DOI
  10.1007/s10120-020-01061-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16H02481
[Journal Article] Molecular Taxonomy of Interstitial Cystitis/Bladder Pain Syndrome Based on Whole Transcriptome Profiling by Next-Generation RNA Sequencing of Bladder Mucosal Biopsies2019
- Author(s)
  Akiyama Yoshiyuki、Maeda Daichi、Katoh Hiroto、Morikawa Teppei、Niimi Aya、Nomiya Akira、Sato Yusuke、Kawai Taketo、Goto Akiteru、Fujimura Tetsuya、Fukuhara Hiroshi、Nakagawa Tohru、Igawa Yasuhiko、Ishikawa Shumpei、Fukayama Masashi、Kume Haruki、Homma Yukio
- Journal Title
  
  Journal of Urology
  
  Volume: 印刷中 Issue: 2 Pages: 290-300
- DOI
  10.1097/ju.0000000000000234
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H05463, KAKENHI-PROJECT-17H06639, KAKENHI-PROJECT-16K11039, KAKENHI-PROJECT-18K09161, KAKENHI-PROJECT-19K07433, KAKENHI-PROJECT-19K07454, KAKENHI-PROJECT-16K10996
[Journal Article] In vivo effects of mutant RHOA on tumor formation in an orthotopic inoculation model.2019
- Author(s)
  Nishizawa T, Nakano K, Fujii E, Komura D, Kuroiwa Y, Ishimaru C, Monnai M, Aburatani H, Ishikawa S, Suzuki M.
- Journal Title
  
  Oncol Rep.
  
  Volume: 42 Pages: 1745-1754
- DOI
  10.3892/or.2019.7300
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H02481, KAKENHI-PROJECT-19H01031
[Journal Article] Difference in morphology and interactome profiles between orthotopic and subcutaneous gastric cancer xenograft models2018
- Author(s)
  Nakano, Kiyotaka, Takashi Nishizawa, Daisuke Komura, Etsuko Fujii, Makoto Monnai, Atsuhiko Kato, Shin-Ichi Funahashi, Shumpei Ishikawa, and Masami Suzuki
- Journal Title
  
  Journal of Toxicologic Pathology
  
  Volume: 31 Issue: 4 Pages: 293-300
- DOI
  10.1293/tox.2018-0020
- NAID
  130007497156
- ISSN
  0914-9198, 1881-915X
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H02481
[Journal Article] Machine learning methods for histopathological image analysis2018
- Author(s)
  Komura D, Ishikawa S
- Journal Title
  
  Computational and Structural Biotechnology Journal
  
  Volume: 16 Pages: 34-42
- DOI
  10.1016/j.csbj.2018.01.001
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H02481
[Journal Article] A Benchmark for Comparing Precision Medicine Methods in Thyroid Cancer Diagnosis using Tissue Microarrays.2017
- Author(s)
  Ching-Wei Wang, Yu-Ching Lee, Evelyne Calista, Fan Zhou, Hongtu Zhu, Ryohei Suzuki, Daisuke Komura, Shumpei Ishikawa, Shih-Ping Cheng
- Journal Title
  
  Bioinformatics
  
  Volume: 34 Issue: 10 Pages: 1767-1773
- DOI
  10.1093/bioinformatics/btx838
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02481
[Journal Article] Genomic pathobiology of gastric carcinoma.2017
- Author(s)
  Katoh H, Ishikawa S.
- Journal Title
  
  Pathol Int.
  
  Volume: 67 Issue: 2 Pages: 63-63
- DOI
  10.1111/pin.12493
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-16H02481, KAKENHI-PROJECT-26710009
[Journal Article] Protein kinase A inhibition facilitates the antitumor activity of xanthohumol, a valosin-containing protein inhibitor2017
- Author(s)
  Y. Shikata Y, T. Yoshimaru, M. Komatsu, H. Katoh, R. Sato, S. Kanagaki, Y. Okazaki, S. Toyokuni, E. Tashiro, S. Ishikawa, T. Katagiri, M. Imoto,
- Journal Title
  
  Cancer Science
  
  Volume: 108 Issue: 4 Pages: 785-794
- DOI
  10.1111/cas.13175
- NAID
  120006535004
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-24108008, KAKENHI-PROJECT-15H03116, KAKENHI-PROJECT-26350974, KAKENHI-PROJECT-26461948, KAKENHI-PROJECT-15K08398, KAKENHI-PROJECT-16H06276, KAKENHI-PROJECT-16H02481
[Journal Article] Genetic and epigenetic stability of oligodendrogliomas at recurrence.2017
- Author(s)
  Aihara K, Mukasa A, Nagae G, Nomura M, Yamamoto S, Ueda H, Tatsuno K, Shibahara J, Takahashi M, Momose T, Tanaka S, Takayanagi S, Yanagisawa S, Nejo T, Takahashi S, Omata M, Otani R, Saito K, Narita Y, Nagane M, Nishikawa R, Ueki K, Aburatani H, Saito N
- Journal Title
  
  Acta Neuropathol Commun.
  
  Volume: 5 Issue: 1 Pages: 18-18
- DOI
  10.1186/s40478-017-0422-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-26293321, KAKENHI-PROJECT-25462277, KAKENHI-PROJECT-26462177, KAKENHI-PROJECT-16K15641, KAKENHI-PROJECT-15K08987, KAKENHI-PROJECT-17H06159
[Journal Article] CASTIN: a system for comprehensive analysis of cancer-stromal interactome.2017
- Author(s)
  Komura D, Isagawa T, Kishi K, Suzuki R, Sato R, Tanaka M, Katoh H, Yamamoto S, Tatsuno K, Fukayama M, Aburatani H, Ishikawa S.
- Journal Title
  
  BMC Genomics
  
  Volume: 17 (1) Pages: 899-899
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H04287
[Journal Article] Coupling CDH17 and CLDN18 markers for comprehensive membrane-targeted detection of human gastric cancer.2016
- Author(s)
  Matsusaka K, Ushiku T, Urabe M, Fukuyo M, Abe H, Ishikawa S, Seto Y, Aburatani H, Hamakubo T, Kaneda A, Fukayama M.
- Journal Title
  
  Oncotarget
  
  Volume: 7 Issue: 51 Pages: 64168-64181
- DOI
  10.18632/oncotarget.11510
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-16H05412, KAKENHI-PROJECT-15H06098, KAKENHI-PROJECT-15K08611, KAKENHI-PROJECT-16K08729
[Journal Article] CASTIN: a system for comprehensive analysis of cancer-stromal interactome.2016
- Author(s)
  Komura D, Isagawa T, Kishi K, Suzuki R, Sato R, Tanaka M, Katoh H, Yamamoto S, Tatsuno K, Fukayama M, Aburatani H, Ishikawa S
- Journal Title
  
  BMC Genomics
  
  Volume: 17 Issue: 1 Pages: 899-899
- DOI
  10.1186/s12864-016-3207-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-16H02481
[Journal Article] RHOA mutation in diffuse-type gastric cancer: a comparativeclinicopathology analysis of 87 cases.2016
- Author(s)
  Ushiku T, Ishikawa S, Kakiuchi M, Tanaka A, Katoh H, Aburatani H, Lauwers GY, Fukayama M.
- Journal Title
  
  Gastric Cancer
  
  Volume: 19 Issue: 2 Pages: 403-411
- DOI
  10.1007/s10120-015-0493-0
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K08340, KAKENHI-PROJECT-24221011
[Journal Article] Receptor tyrosine kinase amplification is predictive of distant metastasis in patients with oral squamous cell carcinoma.2016
- Author(s)
  Oikawa Y, Morita KI, Kayamori K, Tanimoto K, Sakamoto K, Katoh H, Ishikawa S, Inazawa J, Harada H
- Journal Title
  
  Cancer Sci.
  
  Volume: 108 Issue: 2 Pages: 256-266
- DOI
  10.1111/cas.13126
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-15H05908, KAKENHI-PROJECT-16H02481, KAKENHI-PROJECT-16H05510
[Journal Article] Genomic characterization of primary central nervous system lymphoma.2016
- Author(s)
  Fukumura K, Kawazu M, Kojima S, Ueno T, Sai E, Soda M, Ueda H, Yasuda T, Yamaguchi H, Lee J, Shishido-Hara Y, Sasaki A, Shirahata M, Mishima K, Ichimura K, Mukasa A, Narita Y, Saito N, Aburatani H, Nishikawa R, Nagane M, Mano H.
- Journal Title
  
  Acta Neuropathol.
  
  Volume: 印刷中
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24221011
[Journal Article] Tumor Content Chart-Assisted HER2/CEP17 Digital PCR Analysis of Gastric Cancer Biopsy Specimens.2016
- Author(s)
  Matsusaka K, Ishikawa S, Nakayama A, Ushiku T, Nishimoto A, Urabe M, Kaneko N, Kunita A, Kaneda A, Aburatani H, Fujishiro M, Seto Y, Fukayama M.
- Journal Title
  
  PLoS One
  
  Volume: 11 Issue: 4 Pages: e0154430-e0154430
- DOI
  10.1371/journal.pone.0154430
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-26253021, KAKENHI-PROJECT-16H05412, KAKENHI-PROJECT-16K15422, KAKENHI-PROJECT-16K08729, KAKENHI-PROJECT-15H04806
[Journal Article] The role of HGF/MET and FGF/FGFR in fibroblast-derived growth stimulation and lapatinib-resistance of esophageal squamous cell carcinoma2015
- Author(s)
  Shin Saito, Kazue Morishima, Takashi Ui, Hiroko Hoshino, Daisuke Matsubara, Shumpei Ishikawa, Hiroyuki Aburatani, Masashi Fukayama, Yoshinori Hosoya, Naohiro Sato, Alan K Lefor, Yoshikazu Yasuda and Toshiro Niki
- Journal Title
  
  BMC cancer
  
  Volume: 15 Issue: 1 Pages: 1-12
- DOI
  10.1186/s12885-015-1065-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-25460432, KAKENHI-PROJECT-25670178, KAKENHI-PROJECT-26293080, KAKENHI-PROJECT-25710020
[Journal Article] The HSP90 inhibitor 17-N-allylamino-17-demethoxy geldanamycin (17-AAG) synergizes with cisplatin and induces apoptosis in cisplatin-resistant esophageal squamous cell carcinoma cell lines via the Akt/XIAP pathway.2014
- Author(s)
  Ui T, Morishima K, Saito S, Sakuma Y, Fujii H, Hosoya Y, Ishikawa S, Aburatani H, Fukayama M, Niki T, Yasuda Y.
- Journal Title
  
  Oncol Rep.
  
  Volume: 31(2) Issue: 2 Pages: 619-24
- DOI
  10.3892/or.2013.2899
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22134003, KAKENHI-PROJECT-25670178, KAKENHI-PROJECT-26293080
[Journal Article] Expression of PRMT5 in lung adenocarcinoma and its significance in epithelial-mesenchymal transition.2014
- Author(s)
  Ibrahim R, Matsubara D, Osman W, Morikawa T, Goto A, Morita S, Ishikawa S, Aburatani H, Takai D, Nakajima J, Fukayama M, Niki T, Murakami Y
- Journal Title
  
  Hum Pathol.
  
  Volume: 45 Issue: 7 Pages: 1397-405
- DOI
  10.1016/j.humpath.2014.02.013
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-25290051, KAKENHI-PROJECT-25460431, KAKENHI-PROJECT-25460432, KAKENHI-PROJECT-25670178, KAKENHI-PROJECT-26293080, KAKENHI-PROJECT-26640121
[Journal Article] がんと間質のインタラクトーム解析2014
- Author(s)
  石川俊平
- Journal Title
  
  病理と臨床　ゲノム創薬と病理
  
  Volume: 32(8) Pages: 850-856
- Data Source
  KAKENHI-PROJECT-25710020
[Journal Article] Recurrent gain-of-function mutations of RHOA in diffuse-type gastric carcinoma.2014
- Author(s)
  Kakiuchi M, Nishizawa T, Ueda H, Gotoh K, Tanaka A, Hayashi A, Yamamoto S, Tatsuno K, Katoh H, Watanabe Y, Ichimura T, Ushiku T, Funahashi S, Tateishi K, Wada I, Shimizu N, Nomura S, Koike K, Seto Y, Fukayama M, Aburatani H, Ishikawa S
- Journal Title
  
  Nat Genet.
  
  Volume: 46(6) Issue: 6 Pages: 583-7
- DOI
  10.1038/ng.2984
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-22134003, KAKENHI-PLANNED-24108007, KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-26253021
[Journal Article] Clinicopathological and prognostic significance of EZH2 expression in upper urinary tract carcinoma.2014
- Author(s)
  Hayashi A, Morikawa T, Kawai T, Kume H, Ishikawa S, Homma Y, Fukayama M.
- Journal Title
  
  Virchows Arch
  
  Volume: 464 Issue: 4 Pages: 463-471
- DOI
  10.1007/s00428-014-1541-6
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25460412, KAKENHI-PROJECT-25710020
[Journal Article] Concurrent Activation of Acetylation and Tri-Methylation of H3K27 in a Subset of Hepatocellular Carcinoma with Aggressive Behavior2014
- Author(s)
  Hayashi A, Yamauchi N, Shibahara J, Kimura H, Morikawa T, Ishikawa S, Nagae G, Nishi A, Sakamoto Y, Kokudo N, Aburatani H, Fukayama M.
- Journal Title
  
  PLoS One
  
  Volume: 9 Issue: 3 Pages: e91330-e91330
- DOI
  10.1371/journal.pone.0091330
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-25860521
[Journal Article] EVI1 oncogene promotes KRAS pathway through suppression of microRNA-96 in pancreatic carcinogenesis.2014
- Author(s)
  Tanaka M, Suzuki HI, Shibahara J, Kunita A, Isagawa T, Yoshimi A, Kurokawa M, Miyazono K, Aburatani H, Ishikawa S, Fukayama M.
- Journal Title
  
  Oncogene
  
  Volume: 33(19) Issue: 19 Pages: 2454-63
- DOI
  10.1038/onc.2013.204
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134003, KAKENHI-PROJECT-24689018, KAKENHI-PROJECT-25860263, KAKENHI-PROJECT-25860289, KAKENHI-PROJECT-26860474
[Journal Article] A subset of small cell lung cancer with low neuroendocrine expression and good prognosis: a comparison study of surgical and inoperable cases with biopsy.2014
- Author(s)
  Hamanaka, W, Motoi, N, Ishikawa, S., et al.
- Journal Title
  
  Human Pathology
  
  Volume: 45 Issue: 5 Pages: 1045-1056
- DOI
  10.1016/j.humpath.2014.01.001
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23501301, KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-24240042, KAKENHI-PROJECT-24590438
[Journal Article] Lung cancer with loss of BRG1?BRM,shows epithelial mesenchymal transition phenotype and distinct histologic and genetic features.2013
- Author(s)
  Matsubara D, Murakami Y, Niki T et al.
- Journal Title
  
  Cancer Sci
  
  Volume: 104 Issue: 2 Pages: 266-273
- DOI
  10.1111/cas.12065
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22300336, KAKENHI-PROJECT-23659189, KAKENHI-PROJECT-23790413, KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-25290051, KAKENHI-PROJECT-25670178, KAKENHI-PLANNED-22134003
[Journal Article] PRC2 overexpression and PRC2-target gene repression relating to poorer prognosis in small cell lung cancer.2013
- Author(s)
  Sato T, Kaneda A, Tsuji S, Isagawa T, Yamamoto S, Fujita T, Yamanaka R, Tanaka Y, Nukiwa T, Marquez VE, Ishikawa Y, Ichinose M, Aburatani H.
- Journal Title
  
  Sci Rep.
  
  Volume: 3 Issue: 1 Pages: 1911-1911
- DOI
  10.1038/srep01911
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24221011
[Journal Article] Recurrent mutations in multiple components of the cohesin complex in myeloid neoplasms.2013
- Author(s)
  Kon A, Yoshida K
- Journal Title
  
  Nature Genet.
  
  Volume: 45 Issue: 10 Pages: 1232-1237
- DOI
  10.1038/ng.2731
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12J04216, KAKENHI-PLANNED-22134003, KAKENHI-PLANNED-22134006, KAKENHI-PROJECT-22221009, KAKENHI-PLANNED-23106004, KAKENHI-PROJECT-23249052, KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-24249056, KAKENHI-PROJECT-24390242, KAKENHI-PROJECT-24659458, KAKENHI-PROJECT-25290065, KAKENHI-PROJECT-25461408, KAKENHI-PROJECT-25670446, KAKENHI-PROJECT-25670471, KAKENHI-PROJECT-25670489, KAKENHI-PROJECT-25730173, KAKENHI-PROJECT-25860521
[Journal Article] Genome-wide single nucleotide polymorphism arrays as a diagnostic tool in patients with synchronous endometrial and ovarian cancer.2012
- Author(s)
  Ikeda Y, Oda K, Nakagawa S
- Journal Title
  
  Int J Gynecol Cancer
  
  Volume: 22(5） Issue: 5 Pages: 725-31
- DOI
  10.1097/igc.0b013e31824c6ea6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22591848, KAKENHI-PROJECT-23592436, KAKENHI-PROJECT-23592437, KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-24592505, KAKENHI-PLANNED-22134003
[Journal Article] Identification of CCDC6-RET fusion in the human lung adenocarcinoma cell line, LC-2/ad.2012
- Author(s)
  Matsubara D, Murakami Y, Niki T et al.
- Journal Title
  
  J Thorac Oncol
  
  Volume: 7 Issue: 12 Pages: 1872-1876
- DOI
  10.1097/jto.0b013e3182721ed1
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22300336, KAKENHI-PROJECT-23659189, KAKENHI-PROJECT-23790413, KAKENHI-PROJECT-24221011, KAKENHI-PLANNED-22134003
[Journal Article] Tissue-specific demethylation in CpG-poor promoters during cellular differentiation2011
- Author(s)
  Nagae G, Isagawa T, Shiraki N, Fujita T, Yamamoto S, Tsutsumi S, Nonaka A,Yoshiba S, Matsusaka K, Midorikawa Y,Ishikawa S, Soejima H, Fukayama M,Suemori H, Nakatsuji N, Kume S,Aburatani H
- Journal Title
  
  Hum Mol Genetics
  
  Volume: 20(14) Issue: 14 Pages: 2710-21
- DOI
  10.1093/hmg/ddr170
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20221009, KAKENHI-PLANNED-22134003, KAKENHI-PROJECT-23659181, KAKENHI-PROJECT-23790775
[Journal Article] 癌のデジタルトランスクリプトーム解析2011
- Author(s)
  石川俊平
- Journal Title
  
  医学のあゆみ特集
  
  Volume: 36 Pages: 593-598
- Data Source
  KAKENHI-PLANNED-22134003
[Journal Article] High-resolution characterization of a hepatocellular carcinoma genome2011
- Author(s)
  Totoki Y, Tatsuno K, Yamamoto S, Arai Y, Hosoda F, Ishikawa S, Tsutsumi S,Sonoda K, Totsuka H, Shirakihara T,Sakamoto H, Wang L, Ojima H, Shimada K, Kosuge T, Okusaka T, Kato K, Kusuda J, Yoshida T, Aburatani H & S h i b a t a T
- Journal Title
  
  Nat Genet
  
  Volume: 43(5) Issue: 5 Pages: 464-9
- DOI
  10.1038/ng.804
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20221009, KAKENHI-PROJECT-22310123
[Journal Article] Claudin-18 is an early-stage marker of pancreatic carcinogenesis2011
- Author(s)
  Tanaka M, Shibahara J, Fukushima N, Shinozaki A, Umeda M, Ishikawa S, Kokudo N, Fukayama M
- Journal Title
  
  J Histochem Cytochem
  
  Volume: 59 Issue: 10 Pages: 942-952
- DOI
  10.1369/0022155411420569
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134003, KAKENHI-PROJECT-22590318
[Journal Article] B-catenin (CTNNB1) S33C mutation in ovarian microcystic stromal tumors2011
- Author(s)
  Maeda D, Shibahara J, Sakuma T, Isobe M, Teshima S, Mori M, Oda K, Nakagawa S, Taketani Y, Ishikawa S, Fukayama M
- Journal Title
  
  Am J Surg Pathol
  
  Volume: 35 Issue: 10 Pages: 1429-1440
- DOI
  10.1097/pas.0b013e31822d6c71
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134003, KAKENHI-PROJECT-23592437
[Journal Article] 癌のデジタルトランスクリプトーム解析2011
- Author(s)
  石川俊平
- Journal Title
  
  医学のあゆみ
  
  Volume: 236 Pages: 593-598
- Data Source
  KAKENHI-PLANNED-22134003
[Journal Article] Tissue-specific emethylation in CpG-poor promoters during cellular differentiation.2011
- Author(s)
  Nagae G, Isagawa T, Shiraki N, Fujita T, Yamamoto S, Tsutsumi S, Nonaka A, Yoshiba S, Matsusaka K, Midorikawa Y, Ishikawa S, Soejima H, Fukayama M, Suemori H, Nakatsuji N, Kume S, Aburatani H.
- Journal Title
  
  Hum Mol Genetics accepted
- Data Source
  KAKENHI-PROJECT-20221009
[Journal Article] 臨床病理検査におけるゲノミクス2011
- Author(s)
  石川俊平、吉本倫子、馬場洋介
- Journal Title
  
  病理と臨床増刊病理診断に役立つ分子生物学
  
  Volume: 29 Pages: 492-507
- Data Source
  KAKENHI-PLANNED-22134003
[Journal Article] Homozygously deleted gene DACH1 regulates tumor-initiating activity of glioma cells2011
- Author(s)
  Watanabe, A., et al
- Journal Title
  
  Proceedings of National Academy of Science U.S.A.
  
  Volume: 108 Issue: 30 Pages: 12384-12389
- DOI
  10.1073/pnas.0906930108
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19002014, KAKENHI-PROJECT-20221009, KAKENHI-PROJECT-21390404, KAKENHI-PROJECT-21591864, KAKENHI-PLANNED-22134003, KAKENHI-PUBLICLY-23134501, KAKENHI-PROJECT-23390343
[Journal Article] ASCL1-coexpression profiling but not single gene expression profiling defines lung adenocarcinomas of neuroendocrine nature with poor prognosis2011
- Author(s)
  Fujiwara T, Aburatani H, et al.
- Journal Title
  
  Lung Cancer
  
  Volume: 75 Issue: 1 Pages: 119-25
- DOI
  10.1016/j.lungcan.2011.05.028
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20221009, KAKENHI-PLANNED-22134003, KAKENHI-PROJECT-22700909, KAKENHI-PROJECT-24240042
[Journal Article] DNA Methylation Profiling of Embryonic Stem Cell Differentiation into the Three Germ Layers2011
- Author(s)
  Isagawa T, Nagae G, Shiraki N, Fujita T, Sato N, Ishikawa S, Kume S, Aburatani H
- Journal Title
  
  PLoS ONE
  
  Volume: 6(10) Issue: 10 Pages: e26052-e26052
- DOI
  10.1371/journal.pone.0026052
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20221009, KAKENHI-PLANNED-22134003, KAKENHI-PROJECT-22659070, KAKENHI-PROJECT-23790775
[Journal Article] Co-activation of epidermal growth factor receptor and c-MET defines a distinct subset of lung adenocarcinomas.2010
- Author(s)
  Matsubara D, Ishikawa S, Sachiko O, Aburatani H, Fukayama M, Niki T.
- Journal Title
  
  Am J Pathol.
  
  Volume: 177 Pages: 2191-2204
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134003
[Journal Article] Identification of chromosomal aberrations of metastatic potential in colorectal carcinoma2010
- Author(s)
  Yamamoto S, Midorikawa Y, Morikawa T, Nishimura Y, Sakamoto H, Ishikawa S, Akagi K, Aburatani H.
- Journal Title
  
  Genes Chromosomes Cancer. 49(5)
  
  Pages: 487-496
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20018005
[Journal Article] Population-genetic nature of copy number variations in the human genome2010
- Author(s)
  Kato M, Kawaguchi T, Ishikawa S, Umeda T, Nakamichi R, Shapero MH, Jones KW, Nakamura Y, Aburatani H, Tsunoda T.
- Journal Title
  
  Hum Mol Genet. 19(5)
  
  Pages: 761-763
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20018005
[Journal Article] Genome-wide single nucleotide polymorphism arrays in endometrial carcinomas associate extensive chromosomal instability with poor prognosis and unveil frequent chromosomal imbalances involved in P13-kinase pathway.2010
- Author(s)
  Murayama-Hosokawa S, Oda K, Nakagawa S, Ishikawa S, Yamamoto S, Shoji K, Ikeda Y, Uehara Y, Fukayama M, McCormick F, Yano T, Taketani Y, Aburatani H.
- Journal Title
  
  Oncogene 29(13)
  
  Pages: 1897-1908
- Data Source
  KAKENHI-PROJECT-20221009
[Journal Article] Genome-wide single nucleotide polymorphism arrays in endometrial carcinomas associate extensive chromosomal instabilitywith poor prognosis and unveil frequent chromosomal imbalances involved in PI3-kinase pathway2010
- Author(s)
  Murayama-Hosokawa S, Oda K, Nakagawa S, Ishikawa S, Yamamoto S, Shoji K,Ikeda Y, Uehara Y, Fukayama M,McCormick F, Yano T, Taketani Y, Aburatani H
- Journal Title
  
  Oncogene
  
  Volume: 29(13) Issue: 13 Pages: 1897-908
- DOI
  10.1038/onc.2009.474
- Data Source
  KAKENHI-PROJECT-20221009
[Journal Article] Allelic imbalances and homozygous deletion on 8p23. 2 for stepwise progression of hepatocarcinogenesis2009
- Author(s)
  Midorikawa Y, Yamamoto S, Tsuji S, Kamimura N, Ishikawa S, Igarashi H, Makuuchi M, Kokudo N, Sugimura H, Aburatani H
- Journal Title
  
  Hepatology 49
  
  Pages: 513-22
- Data Source
  KAKENHI-PROJECT-19591601
[Journal Article] Allelic imbalances and homozygous deletion on 8p23.2 for stepwise progression of hepatocarcinogenesis.2009
- Author(s)
  Midorikawa Y, Yamamoto S, Tsuji S, Kamimura N, Ishikawa S, Igarashi H, Makuuchi M, Kokudo N, Sugimura H, Aburatani H.
- Journal Title
  
  Hepatology 49(2)
  
  Pages: 513-522
- Data Source
  KAKENHI-PROJECT-20221009
[Journal Article] Allelic imbalances and homozygous deletion on 8p23.2 for stepwise progression of hepatocarcinogenesis2009
- Author(s)
  Midorikawa Y, Yamamoto S, T suji S, Kamimura N, Ishikawa S, Igarashi H, Makuuchi M, Kokudo N, Sugimura H, Aburatani H
- Journal Title
  
  Hepatology 49
  
  Pages: 513-522
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20018005
[Journal Article] Allelic imbalances and homozygous deletion on 8p23.2 for stepwise progression of hepatocarcinogenesis2009
- Author(s)
  Midorikawa Y, Yamamoto S, Tsuji S,Kamimura N, Ishikawa S, Igarashi H,Makuuchi M, Kokudo N, Sugimura H,Aburatani H
- Journal Title
  
  Hepatology
  
  Volume: 49(2) Issue: 2 Pages: 513-22
- DOI
  10.1002/hep.22698
- Data Source
  KAKENHI-PROJECT-20221009
[Journal Article] EYA4, deleted in a case with middle interhemispheric variant of holoprosencephaly, interacts with SIX3 both physically and functionally2009
- Author(s)
  Abe Y, Oka A, Mizuguchi M, Igarashi T, Ishikawa S, Aburatani H, Yokoyama S, Asahara H, Nagao K, Yamada M, Miyashita T.
- Journal Title
  
  Hum Mutat. 30(10)
  
  Pages: 946-955
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20018005
[Journal Article] High-density oligonucleotide array with sub-kilobase resolution reveals breakpoint information of submicroscopic deletions in nevoid basal cell carcinoma syndrome.2007
- Author(s)
  Fujii K, Ishikawa s, Uchikawa H, Komura D, Shapero MH, Shen F, Hung J, Arai H, Tanaka y, Sasaki K, Kohno y, Yamada m, Jones KW, Aburatani H, Miyashita T.
- Journal Title
  
  Human Genetics 122
  
  Pages: 459-466
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18018007
[Journal Article] Constitutive activation of c-Met is correlated with c-Met overexpression and dependent on cell-matrix adhesion in lung adenocarcinoma cell lines2007
- Author(s)
  Nakamura Y, Matsubara D, Goto A, Ota S, Sachiko O, Ishikawa S, Aburatani H, Miyazawa K, Fukayama M, Niki T.
- Journal Title
  
  Cancer Science 99
  
  Pages: 14-22
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18710161
[Journal Article] Identification of the transforming EML4-ALK fusion gene in non-small-cell lung cancer.2007
- Author(s)
  Soda M, Ishikawa S, Aburatani H
- Journal Title
  
  Nature 448
  
  Pages: 561-566
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] High-density oligonucleotide array with sub-kilobase resolution reveals breakpoint information of submicroscopic deletions in nevoid basal cell carcinoma syndrome.2007
- Author(s)
  Fujii K, Ishikawa S, Aburatani H
- Journal Title
  
  Hum Genet 122
  
  Pages: 459-466
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays2006
- Author(s)
  Daisuke Komura, Fan Shen, Shumpei Ishikawa (First authors with equal contribution) et al.
- Journal Title
  
  Genome Research Vol.16
  
  Pages: 1575-1584
- Data Source
  KAKENHI-PROJECT-18018007
[Journal Article] Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays.2006
- Author(s)
  Komura D, Ishikawa S, Aburatani H
- Journal Title
  
  Genome Res 16
  
  Pages: 1575-1584
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Noise Reduction from genotyping microarravs using probe level information.2006
- Author(s)
  Komura D, Ishikawa S, Aburatani H
- Journal Title
  
  In Silico Biol 6
  
  Pages: 79-92
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Global variation in copy number in the human genome.2006
- Author(s)
  Redon R, Ishikawa S, Aburatani H
- Journal Title
  
  Nature 444
  
  Pages: 444-454
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Global variation in copy number in the human genome2006
- Author(s)
  Richard Rendon, Shumpei Ishikawa, Karen R.Fitch, Lars Feuk, George H.Perry (First authors with equal contribution) et al.
- Journal Title
  
  Nature Vol.444
  
  Pages: 444-454
- Data Source
  KAKENHI-PROJECT-18018007
[Journal Article] CARAT: A novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays.2006
- Author(s)
  Huang J, Ishikawa S, Aburatani H
- Journal Title
  
  BMC Bioinformatics 7
  
  Pages: 83-83
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] CARAT : A novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays.2006
- Author(s)
  Huang J, Ishikawa S, Aburatani H
- Journal Title
  
  BMC Bioinformatics 7
  
  Pages: 83-83
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Molecular karyotyping of human hepatocellular carcinoma using single-nucleotide polymorphism arrays.2006
- Author(s)
  Midorikawa Y, Yamamoto S, Ishikawa S, Kamimura N, Igarashi H, Sugimura H, Makuuchi M, Aburatani H.
- Journal Title
  
  Oncogene Vol.25
  
  Pages: 5581-5590
- Data Source
  KAKENHI-PROJECT-18710161
[Journal Article] Molecular karyotyping of human hepatocellular carcinoma using single-nucleotide polymorDhism arrays.2006
- Author(s)
  Midorikawa Y, Ishikawa S, Aburatani H
- Journal Title
  
  Oncogene 25
  
  Pages: 5581-5590
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Molecular karyotyping of human hepatocellular carcinoma using single-nucleotide polymorphism arrays.2006
- Author(s)
  Midorikawa Y, Ishikawa S, Aburatani H
- Journal Title
  
  Oncogene 25
  
  Pages: 5581-5590
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Noise Reduction from genotyping microarrays using probe level information.2006
- Author(s)
  Komura D, Ishikawa S, Aburatani H
- Journal Title
  
  In Silico Biol 6
  
  Pages: 79-92
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Allelic dosage analysis with genotyping microarrays.2005
- Author(s)
  Ishikawa S, Aburatani H
- Journal Title
  
  Biochem Biophys Res Commun 333
  
  Pages: 1309-1314
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Two subclasses of lung squamous cell carcinoma with different gene expression profiles and prognosis identified by hierarchical clustering and non-negative matrix factorization.2005
- Author(s)
  Inamura K, Ishikawa S, Aburatani H
- Journal Title
  
  Oncogene 24
  
  Pages: 7105-7113
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Two subclasses of lung squamous cell carcinoma with different gene expression profiles and prognosis identified by hierarchical clustering and non-negative matrix2005
- Author(s)
  Inamura K, Ishikawa S, Aburatani H
- Journal Title
  
  Oncogene 24
  
  Pages: 7105-7113
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Overexpression of the Aldo-Keto Reductase Family Protein AKR1B10 Is Highly Correlated with Smokers' Non-Small Cell Lung Carcinomas.2005
- Author(s)
  Fukumoto S, Ishikawa S, Aburatani H
- Journal Title
  
  Clin Cancer Res 11
  
  Pages: 1776-1185
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] Allelic dosage analysis with genotyping microarrays.2005
- Author(s)
  Ishikawa S, et al.
- Journal Title
  
  Biochem Biophys Res Commun 333(4)
  
  Pages: 1309-1314
- Data Source
  KAKENHI-PROJECT-16101006
[Journal Article] High-resolution haracterization of a patocellular carcinoma genome.
- Author(s)
  Totoki Y, Tatsuno K, Yamamoto S, Arai Y, Hosoda F, Ishikawa S, Tsutsumi S, Sonoda K, Totsuka H, Shirakihara T, Sakamoto H, Wang L, Ojima H, Shimada K, Kosuge T, Okusaka T, Kato K, Kusuda J, Yoshida T, Aburatani H, Shibata T.
- Journal Title
  
  Nature genetics accepted
- Data Source
  KAKENHI-PROJECT-20221009
[Patent] 発現量多様性を有する遺伝子の同定法2008
- Inventor(s)
  油谷浩幸、石川俊
- Industrial Property Rights Holder
  東京大学ほか
- Acquisition Date
  2008-04-18
- Overseas
- Data Source
  KAKENHI-PROJECT-20221009
[Patent] 発現量多様性を有する遺伝子の同定法2008
- Inventor(s)
  油谷浩幸、石川俊平
- Industrial Property Rights Holder
  東京大学
- Acquisition Date
  2008-04-18
- Data Source
  KAKENHI-PROJECT-20221009
[Patent] 発現量多様性を有する遺伝子の同定法2008
- Inventor(s)
  油谷浩幸, 石川俊平
- Industrial Property Rights Holder
  東京大学, ハプロファーマ
- Acquisition Date
  2008-04-18
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16101006
[Patent] 遺伝子コピーの解析方法及び装置2005
- Inventor(s)
  油谷浩幸, 石川俊平, 西村邦裕, 河村大輔
- Industrial Property Rights Holder
  国立大学法人東京大学
- Filing Date
  2005-09-07
- Data Source
  KAKENHI-PROJECT-16101006
[Patent] 遺伝子コピーの解析方法及び装置2004
- Inventor(s)
  油谷浩幸, 石川俊平, 西村邦裕
- Industrial Property Rights Holder
  東京大学TLO
- Industrial Property Number
  2004-260328
- Filing Date
  2004-09-07
- Data Source
  KAKENHI-PROJECT-16101006
[Patent] 発現量多様性を有する遺伝子の同定法2004
- Inventor(s)
  油谷浩幸, 石川俊平
- Industrial Property Rights Holder
  東京大学, ハプロファーマ
- Industrial Property Number
  2004-366671
- Filing Date
  2004-12-17
- Description
  「研究成果報告書概要(和文)」より
- Overseas
- Data Source
  KAKENHI-PROJECT-16101006
[Patent] 遺伝子コピーの解析方法及び装置2004
- Inventor(s)
  油谷浩幸, 石川俊平, 西村邦裕
- Industrial Property Rights Holder
  CASTI
- Industrial Property Number
  2004-260328
- Filing Date
  2004-09-07
- Description
  「研究成果報告書概要(和文)」より
- Overseas
- Data Source
  KAKENHI-PROJECT-16101006
[Patent] PPARγ遺伝子の遺伝子多型に関連する表現型の判定方法2004
- Inventor(s)
  油谷浩幸, 石川俊平
- Industrial Property Rights Holder
  東京大学, ハプロファーマ, シミック
- Industrial Property Number
  2004-371948
- Filing Date
  2004-12-22
- Description
  「研究成果報告書概要(和文)」より
- Overseas
- Data Source
  KAKENHI-PROJECT-16101006
[Presentation] 深層学習を用いた病理組織像からの胃癌上皮亜型セグメンテーションのための半自動的アノテーション法2023
- Author(s)
  楊智鈞、河村大輔、越智三枝子、石川俊平
- Organizer
  第112回日本病理学会総会
- Data Source
  KAKENHI-PROJECT-22H04990
[Presentation] ヒト正常及び腸上皮化生胃粘膜のシングルセルRNA-seqと空間転写解析の統合的解析2023
- Author(s)
  坪坂歩、垣内美和子、河村大輔、加藤洋人、牛久哲男、石川俊平
- Organizer
  第82回日本癌学会学術総会
- Data Source
  KAKENHI-PROJECT-22H04990
[Presentation] 同一標本に対するH&E染色と免疫染色を利用した細胞セグメンテーションのための癌病理組織像データセットの開発2022
- Author(s)
  河村大輔, 斧山匠, 新保幸輝, 小高滉人, 遠藤春哉, 越智三枝子, 加藤洋人, 牛久哲男, & 石川俊平
- Organizer
  第68回日本病理学会秋季特別総会
- Data Source
  KAKENHI-PROJECT-22H04990
[Presentation] 眼窩内海綿状血管奇形における新規関連遺伝子変異の同定.2022
- Author(s)
  本郷博貴, 宮脇哲, 寺西裕, 堂福翔吾, 小原健太, 石神大一郎, 岡野淳, 三井純, 加藤洋人, 栗田昌和, 渡邉正勝, 辛正廣, 中冨浩文, 後藤浩, 石川俊平, 齊藤延人.
- Organizer
  日本脳神経外科学会第81回学術総会
- Data Source
  KAKENHI-PROJECT-21H03041
[Presentation] ディープラーニングを用いた細胞セグメンテーションのための癌病理組織画像データセット.2022
- Author(s)
  河村大輔, 斧山巧, 新保幸輝, 小高滉人, 遠藤春哉, 越智三枝子, 加藤洋人, 牛久哲男, & 石川俊平
- Organizer
  The 81st Annual Meeting of the Japanese Cancer Association
- Data Source
  KAKENHI-PROJECT-22H04990
[Presentation] 眼窩内海綿状血管奇形関連遺伝子変異の同定.2022
- Author(s)
  本郷博貴, 宮脇哲, 栗田昌和, 加藤基, 寺西裕, 堂福翔吾, 小原健太, 石神大一郎, 岡野淳, 三井純, 加藤洋人, 渡邉正勝, 辛正廣, 中冨浩文, 後藤浩, 石川俊平, 岡崎睦, 齊藤延人.
- Organizer
  第18回日本血管腫血管奇形学会学術集会
- Data Source
  KAKENHI-PROJECT-21H03041
[Presentation] Large-scale histological image dataset with various stain conditions and scanners for the robust machine learning model development.2022
- Author(s)
  Ochi, M., Komura, D., & Ishikawa, S.
- Organizer
  Applications of Medical AI (AMAI) at MICCAI 2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04990
[Presentation] 多種染色条件および撮像媒体による多彩な色調を呈するH&E染色病理組織画像データセットの構築.2022
- Author(s)
  越智三枝子, 河村大輔, 斧山巧, 新保幸輝, 小高滉人, 遠藤春哉, 牛久哲男, & 石川俊平
- Organizer
  The 81st Annual Meeting of the Japanese Cancer Association
- Data Source
  KAKENHI-PROJECT-22H04990
[Presentation] 一細胞解析によるがんの多様性の解明.2020
- Author(s)
  石川俊平
- Organizer
  第24回日本がん分子標的治療学会学術総会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] Genomically defined Environmental and Germline Factors for Asian Gastric Cancer.2020
- Author(s)
  Shumpei Ishikawa
- Organizer
  The 79th Annual Meeting of the Japanese Cancer Association
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] Human epididymis protein 4の発現が膵臓癌における抗癌剤耐性・予後不良に与える影響.2020
- Author(s)
  大熊遼太朗, 矢田英理香, 石川俊平, 河村大輔, 久保田祐太郎, 濱田和幸, 堀池篤, 安藤清宏, 鶴谷純司, 吉村清, 笹田哲朗, 村上雅彦, 瀧本雅文, 角田卓也, & 和田聡.
- Organizer
  The 79th Annual Meeting of the Japanese Cancer Association
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] 環境要因とがん発生におけるゲノム変異シグネチャとの関連.2020
- Author(s)
  加藤洋人, 鈴木章浩, 河村大輔, 牛久哲男, 油谷浩幸, & 石川俊平.
- Organizer
  第９１回日本衛生学会学術総会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] 胃がんのシングルセル解析2020
- Author(s)
  加藤洋人, 河村大輔, 坪坂歩, 古久保宙希, & 石川俊平.
- Organizer
  第９１回日本衛生学会学術総会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] 肉腫患者由来ゼノグラフトのRNA発現解析.2020
- Author(s)
  大津敬, 笠島理加, 鷲見公太, 廣島幸彦, 片山琴絵, 清水英悟, 山口類, 井元清哉, 宮野悟, 河村大輔, 石川俊平, 横瀬智之, 比留間徹, & 宮城洋平.
- Organizer
  The 79th Annual Meeting of the Japanese Cancer Association
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] ゲノムから見たアジア人の胃がん.2020
- Author(s)
  石川俊平
- Organizer
  第９１回日本衛生学会学術総会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] Visualizing ligand-receptor-mediated interactome in single cell transcriptome data2019
- Author(s)
  Daisuke Komura, Ryohei Suzuki, Shumpei Ishikawa
- Organizer
  Cold Spring Harbor Laboratory Meeting, Systems Immunology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] 凍結臨床試料を用いたシングルセルRNA-seq法の確立2019
- Author(s)
  橋本至, 加藤洋人, 林周斗, 河村大輔, 大島貴, 利野靖, 益田宗孝, 石川俊平
- Organizer
  第90回日本衛生学会学術総会（誌上開催）
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] Interactome analysis of gastric cancer microenvironment by single-cell transcriptome sequencing2019
- Author(s)
  Shumpei Ishikawa, Daisuke Komura, Ryohei Suzuki, Hiroto Katoh
- Organizer
  Cell Symbosia. Single Cells: Technology to Biology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] The genomic profile of metastatic diffuse-type gastric cancer in Cdh1loxP/loxP; Trp53loxP/loxP double conditional knockout mice2019
- Author(s)
  Zhang, Menghua, Sugita, Itsuki, Komura, Daisuke, Ishikawa, Shumpei
- Organizer
  第42回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] Single-cell analysis of diffuse-type gastric carcinoma microenvironment2019
- Author(s)
  Shumpei Ishikawa
- Organizer
  第78回日本癌学会学術総会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] The prevention of lymphoproliferative lesions arising in patient-derived cancer xenografts by anti-graft -versus-host disease agents2017
- Author(s)
  Tsuyoshi Chijiwa, Hiroshi Suemizu, Shunpei Ishikawa, Masato Nakamura, Yohei Miyagi
- Organizer
  AACR Advances in Modeling Cancer in Mice: Bology, and Beyond
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H04287
[Presentation] 治療標的探索のためのがん－間質細胞間相互作用解析システム.2017
- Author(s)
  河村大輔, 砂河孝行, 鈴木良平, 佐藤玲子, 加藤洋人, 田中麻理子, 山本尚吾, 深山正久, 油谷浩幸, 石川俊平.
- Organizer
  第106回日本病理学会総会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] 治療標的探索のためのがんー間質細胞間相互作用の網羅的解析.2017
- Author(s)
  河村大輔, 鈴木良平, 加藤洋人, 山本尚吾, 油谷浩幸, 石川俊平.
- Organizer
  第76回日本癌学会学術総会
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] Comprehensive and serial analyses of tumor-stroma interactions in individual PDX/NOG models contribute to personalized chemotherapy.2017
- Author(s)
  T. Chijiwa, M. Haraguchi, D. Komura, A. Noguchi, M. Shiozawa, M. Katayama, N. Miyao, N. Matsui, Y. Tateishi, H. Suemizu, Y. Nakamura, T. Isagawa, H. Katoh, S. Ishikawa, M. Nakamura, Y. Miyagi
- Organizer
  AACR International Conference on New Frontiers in Cancer Research
- Place of Presentation
  Cape Town, South Africa
- Year and Date
  2017-01-18
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] The possiblity of personalize chemotherapy for non-small celll lung cancer using interactome analysis od PDX/NOG models2017
- Author(s)
  Tsuyoshi Chijiwa, Hiroshi Suemizu, Shunpei Ishikawa, Masato Nakamura, Yohei Miyagi,
- Organizer
  ESMO Asia 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H04287
[Presentation] An interactome analysis for personailized chemotherapy using PDX/NOG modesls of non-small cell lung cancer2017
- Author(s)
  Tsuyoshi Chijiwa, Hiroshi Suemizu,, Shunpei Ishikawa, Yohei Miyagi, Masato Nakamura
- Organizer
  American Associatio for Cancer Research Anuual Meeting 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H04287
[Presentation] CASTIN: a system for comprehensive analysis of cancer-stromal interactome.2017
- Author(s)
  Daisuke Komura, Takayuki Isagawa, Ryohei Suzuki, Reiko Sato, Mariko Tanaka, Shogo Yamamoto, Masashi Fukayama, Hiroyuki Aburatani, Shumpei Ishikawa.
- Organizer
  The 12th International Workshop on Advanced Genomics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] 肺腺癌Xenograft モデルにおける癌間質相互作用の包括的解析.2016
- Author(s)
  吉本多一郎, 松原大祐, 仁木利郎, 河村大輔, 石川俊平.
- Organizer
  第75 回日本癌学会学術総会
- Place of Presentation
  パシフィコ横浜、横浜市、神奈川県
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] Establishment of patient-derived xenografts from malignant pleural effusion using NOG mice.2016
- Author(s)
  Chijiwa, M. Haraguchi, T. Isagawa, A. Noguchi, M. Katayama, N. Miyao, M. Yoshioka, N. Matsui, Y. Tateishi, H. Suemizu, R. Yamada, Y. Nakamura, K. Imai, D. Komura, H. Katoh, S. Ishikawa, M. Nakamura, Y. Miyagi.
- Organizer
  ESMO Asia 2016 Congress
- Place of Presentation
  Singapore, Singapore
- Year and Date
  2016-12-16
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] 腫瘍ー間質間相互作用解析システム.2016
- Author(s)
  河村大輔, 砂河孝行, 鈴木良平, 貴志一樹, 佐藤玲子, 加藤洋人, 田中麻里子, 山本尚吾, 深山正久, 油谷浩幸, 石川俊平
- Organizer
  第75 回日本癌学会学術総会
- Place of Presentation
  パシフィコ横浜、横浜市、神奈川県
- Data Source
  KAKENHI-PROJECT-16H02481
[Presentation] シーケンシングによるがん間質間相互作用の網羅的解析.2015
- Author(s)
  砂河孝行、河村大輔、佐藤玲子、貴志一樹、鈴木良平、石川俊平.
- Organizer
  日本人類遺伝学会第 60 回大会
- Place of Presentation
  京王プラザ　東京
- Year and Date
  2015-10-14
- Data Source
  KAKENHI-PROJECT-25710020
[Presentation] Comprehensive analysis of tumor - stromal interactome2015
- Author(s)
  D. Komura, T. Isagawa, R. Sato, K. Kishi, R. Suzuki, S. Ishikawa
- Organizer
  CSH-ASIA/AACR JOINT MEETING: BIG DATA, COMPUTATION, AND SYSTEMS BIOLOGY IN CANCER
- Place of Presentation
  Suzhou, China
- Year and Date
  2015-12-02
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-25710020
[Presentation] Transcriptome across Diverse Biological Species in Human Gastric Environment2014
- Author(s)
  Hiroto Katoh, Daisuke Komura and Shumpei Ishikawa
- Organizer
  平成25年度「がん支援」公開シンポジウム
- Place of Presentation
  東京（一橋講堂）
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] がん治療標的探索のための細胞間相互作用のゲノミクス2013
- Author(s)
  石川俊平、河村大輔、佐藤玲子、砂河孝行、加藤洋人、油谷浩幸。深山正久
- Organizer
  第102回日本病理学会総会
- Place of Presentation
  札幌（ロイトンホテル）
- Data Source
  KAKENHI-PROJECT-25710020
[Presentation] 胃癌組織や胃粘膜組織におけるメタトランスクリプトーム解析2013
- Author(s)
  石川俊平
- Organizer
  第61回(社)日本病理学会関東支部学術集会
- Place of Presentation
  東京（東京大学鉄門講堂）
- Invited
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] がんと間質の相互作用の包括的解析2013
- Author(s)
  石川俊平、河村大輔、貴志一樹、佐藤玲子、砂河孝行、油谷浩幸
- Organizer
  日本人類遺伝学会　第58回大会
- Place of Presentation
  仙台（江陽グランドホテル）
- Data Source
  KAKENHI-PROJECT-25710020
[Presentation] Sequencing-base approach for cancer-sromal interaction2013
- Author(s)
  Shumpei Ishikawa
- Organizer
  2013SNUCRI Cancer Symposium: Innovative Approaches to Explore Novel Druggable Targets
- Place of Presentation
  チェジュ（フェニックスアイランド）、韓国
- Invited
- Data Source
  KAKENHI-PROJECT-25710020
[Presentation] Systematic profiling of cancer-microenvironment interactome in cancer tissue2013
- Author(s)
  Shumpei Ishikawa, Daisuke Komura, Ryohei Suzuki, Reiko Sato, Masashi Fukayama, Hiroyuki Aburatani
- Organizer
  第72回日本癌学会学術総会
- Place of Presentation
  横浜（パシフィコ横浜）
- Data Source
  KAKENHI-PROJECT-25710020
[Presentation] 細胞間相互作用のシーケンシング2012
- Author(s)
  石川俊平
- Organizer
  日本分子生物学会第12回春季シンポジウム
- Place of Presentation
  山梨県笛吹市
- Year and Date
  2012-04-25
- Invited
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] Histone deacetylases as promising drug targets for treatment of esophageal squamous cell carcinoma.2012
- Author(s)
  Morishima K, Saito S, Matsubara D, Hosoya Y, Sata N, Yasuda Y, Ishikawa S, Niki T.
- Organizer
  Annual Meeting of American Association for Cancer Research
- Place of Presentation
  Chicago
- Year and Date
  2012-04-01
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] Histopathologic and genetic features of lung adenocarcinomas with loss of chromatin remodeling factors, BRG-1 and BRM.2012
- Author(s)
  Matsubara D, Kishaba Y, Ishikawa S, Fukayama M, Niki T.
- Organizer
  Annual Meeting of American Association for Cancer Research
- Place of Presentation
  Chicago
- Year and Date
  2012-04-01
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] Comprehensive analysis of paired cancer-normal tissue from digital transcriptome data.2011
- Author(s)
  石川俊平
- Organizer
  Human Genome Meeting, 2010
- Place of Presentation
  International Convention Center, Dubai, UAE
- Year and Date
  2011-03-16
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] Systematic profiling of druggable cancer interactome2011
- Author(s)
  Shumpei Ishikawa
- Organizer
  JCA-AACR Joint Symposium 2011
- Place of Presentation
  Nagoya, Japan(愛知県)(招待講演)
- Year and Date
  2011-10-03
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] トランスクリプトームシーケンシングによる癌の新規メカニズムの解析2011
- Author(s)
  石川俊平
- Organizer
  がん研究分野の特性等を踏まえた支援活動公開シンポジウム
- Place of Presentation
  一橋学術総合センター(東京都)
- Year and Date
  2011-02-09
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] Digital Counting of Gene Copy Number in Clinical Settings2009
- Author(s)
  Shumpei. Ishikawa, Takeshi Sakatani, Masashi Fukayama, Hiroyuki Aburatani
- Organizer
  2009 ASHG Annual Meeting
- Place of Presentation
  Honolulu, Hawaii, U.S.A.
- Year and Date
  2009-10-20
- Data Source
  KAKENHI-PROJECT-20018005
[Presentation] CNV Detection by Microfluidic Digital Array2008
- Author(s)
  Shumpei Ishikawa, Shogo Yamamoto, Jian Qin, Ramesh Ramakrishnan, Hiroyuki Aburatani
- Organizer
  CSHL Meeting on Biology of the Genome
- Place of Presentation
  Cold Spring Harbor Laboratory, NY, U.S.A
- Year and Date
  2008-05-08
- Data Source
  KAKENHI-PROJECT-20018005
[Presentation] Copy number variation of the drug-associated genes2007
- Author(s)
  Shumpei Ishikawa, Hiroyuki Aburatani
- Organizer
  AACR Molecular Diagnostics in Cancer Therapeutic
- Place of Presentation
  Atlanta, GA
- Year and Date
  2007-09-18
- Data Source
  KAKENHI-PROJECT-18018007
[Presentation] Molecular karyotyping using oligonucleotide microarray identified with distinct subgroups of endometrial cancer2007
- Author(s)
  Satsuki Murayama, Shumpei Ishikawa, Yuriko Uehara, Naoko Kamimura, Shogo Yamamoto, Shunsuke Nakagawa, Tetsu Yano, Hiroyuki Aburatani
- Organizer
  日本癌学会
- Place of Presentation
  横浜
- Year and Date
  2007-10-04
- Data Source
  KAKENHI-PROJECT-18710161
[Presentation] Discovery of Frequent Gain-offunction Mutation in Diffuse-type Gastric Carcinoma
- Author(s)
  Shumpei Ishikawa
- Organizer
  2014 SNUCRI Cancer Symposium
- Place of Presentation
  Mokpo, Korea
- Year and Date
  2014-04-16 – 2014-04-19
- Invited
- Data Source
  KAKENHI-PLANNED-22134003
[Presentation] Visualizing whole cancer-stromal interactome
- Author(s)
  Kazuki Kishi, Daisuke Komura, Takayuki Isagawa, Shumpei Ishikawa
- Organizer
  13th European Conference on Computational Biology
- Place of Presentation
  Strasbourg, France
- Year and Date
  2014-09-07 – 2014-09-10
- Data Source
  KAKENHI-PROJECT-25710020
[Presentation] Stepwise progression of allele imbalance in hepatocarcinogenesis with special reference to nodule-in-nodule appearance using decision tree analysis
- Author(s)
  Yutaka Midorikawa, Shogo Yamamoto, Shingo Tsuji, Naoko Kamimura, Shumpei Ishikawa, Masatoshi Makuuchi, Hisaki Igarashi, Haruhiko Sugimura, Hiroyuki Aburatani
- Organizer
  99th, American Association for Cancer Research
- Place of Presentation
  San Diego
- Data Source
  KAKENHI-PROJECT-19591601
[Presentation] Integrated analysis of genetic and epigenetic alterations in liver cancer
- Author(s)
  Genta Nagae, Atsushi kaneda, Shuichi Tsutsumi, Shumpei Ishikawa, Yutaka Midorikawa, Hiroyuki Aburatani
- Organizer
  99th, American Association for Cancer Research
- Place of Presentation
  San Diego
- Data Source
  KAKENHI-PROJECT-19591601
[Presentation] Discovery of recurrent gain-of-function mutations of RHOA in diffuse-type gastric cancer
- Author(s)
  Shumpei Ishikawa, Miwako Kakiuchi, Hiroki Ueda, Hiroto Katou, Masashi Fukayama, Hiroyuki Aburatani
- Organizer
  第73回日本癌学会学術総会
- Place of Presentation
  横浜、日本
- Year and Date
  2014-09-25 – 2014-09-27
- Data Source
  KAKENHI-PLANNED-22134003
[]
[]
[]
[]
[]

1. ABURATANI Hiroyuki (10202657)

# of Collaborated Projects: 3 results

# of Collaborated Products: 33 results
2. TSUTSUMI Shuichi (30345152)

# of Collaborated Projects: 3 results

# of Collaborated Products: 4 results
3. MIDORIKAWA Yutaka (10292905)

# of Collaborated Projects: 2 results

# of Collaborated Products: 5 results
4. INAZAWA Johji (30193551)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
5. MAEDA Daichi (30585500)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
6. NAKAMURA Masato (00164335)

# of Collaborated Projects: 2 results

# of Collaborated Products: 3 results
7. OTA Satoshi (90324342)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. FUKAYAMA Masashi (70281293)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. MIYANO SATORU (50128104)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. TSUNODA Tatsuhiko (10273468)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. TAKAHASHI Takashi (50231395)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. OGAWA Seishi (60292900)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. SOGA Tomoyoshi (60338217)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. Homma Yukio (40165626)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
15. Asakage Takahiro (50361481)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 金城聖文 (50401302)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. 砂河孝行 (40418637)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. 筆宝義隆 (30359632)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. 宮城洋平 (00254194)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
20. 安藤潔 (70176014)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
21. 千々和剛 (70642180)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
22. 新美文彩 (00376451)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
23. 井川靖彦 (40159588)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
24. 伊藤雅史 (80393114)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
25. 森川鉄平 (80451772)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
26. 相澤直樹 (80595257)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
27. 森田圭一 (10396971)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
28. 池田貞勝 (20787816)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
29. 東みゆき (90255654)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
30. 齊藤延人 (60262002)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
31. 宮脇哲 (70407914)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
32. 本郷博貴 (80908682)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
33. 三井純 (70579862)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
34. 栗田昌和 (20424111)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
35. 寺西裕 (50844635)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
36. 大島貴 (10448665)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
37. 牛久哲男 (60376415)

# of Collaborated Projects: 1 results

# of Collaborated Products: 6 results
38. TANAKA Atsushi

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
39. YOSHIMURA Kiyoshi

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
40. MATSYBARA Daisuk

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
41. WATANABE Akira

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
42. OKAZAKI Yasumasa

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
43. SHI Lei

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
44. 六反啓文

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
45. 加藤洋人

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
46. 村上善則

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
47. 斎藤延人

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
48. 野村幸世

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
49. 谷本幸介

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
50. 中川俊介

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
51. 元井紀子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
52. 豊國伸哉

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
53. 禹哲漢

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
54. 益田宗孝

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Ishikawa Shumpei 石川 俊平

ISHIKAWA Shumpei 石川 俊平

Research Projects

Research Products

Co-Researchers

A New Definition of Gastric Cancer Diversity through Quantitative Integration of histological and Genomic InformationPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Comprehensive understanding of interstitial signals between cancer and interstitiumPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Sequence-based Cancer-stromal Interactome Analysis for Accessible Therapeutic TargetsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Cancer genomics analysis and biomarker discovery under therapeutic modificationPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

疾患関連コピー数多型解析の基盤整備Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Ishikawa Shumpei 石川俊平

ISHIKAWA Shumpei 石川俊平