MATSUDA Fumio 松田史生

Researcher Number	50462734
Other IDs
Affiliation (Current)	2025: 大阪大学, 大学院情報科学研究科, 教授
Affiliation (based on the past Project Information) *help	2021 – 2024: 大阪大学, 大学院情報科学研究科, 教授 2017 – 2021: 大阪大学, 情報科学研究科, 教授 2013 – 2017: 大阪大学, 情報科学研究科, 准教授 2015: 大阪大学, 大学院情報科学研究科, 准教授
Review Section/Research Field	Principal Investigator Basic Section 27040:Biofunction and bioprocess engineering-related / Biofunction/Bioprocess / Biological Sciences / Constructive Systems Biology Except Principal Investigator Basic Section 59040:Nutrition science and health science-related / Basic Section 52010:General internal medicine-related / Biological Sciences / Chemical engineering and related fields / Biofunction/Bioprocess / Biofunction/Bioprocess
Keywords	Principal Investigator 代謝工学 / 出芽酵母 / 代謝フラックス解析 / 酵母 / 代謝シミュレーション / プロテオーム / メタボローム / エタノール / オミクス解析 / アルコール生産 … More / 有用物質生産 / 代謝制御機構 / 定量プロテオーム解析 / 代謝熱 / 定量プロテオミクス / 代謝フラックス / 速度論代謝モデル / 薬剤耐性獲得機構 / 阻害剤 / 薬剤抵抗性 / トランスオミクス解析 / 薬剤作用機作 / システム生物学 / オミクス計測 / 中枢代謝 / 数理代謝モデル / トランスオミクス / トランクオミクス解析 / 代謝阻害剤 / がん細胞 / 酸化的リン酸化 / 好気的解糖 / 薬剤耐性 / 代謝アダプテーション / メタボローム解析 / 代謝解析 / プロテオーム解析 / メタボローム分析 / 高級アルコール / Entner-doudoroff経路 / 中心代謝 / バイオ生産プロセス / 中心代謝経路 / バイオプロダクション … More Except Principal Investigator 生物情報工学 / 代謝フラックス / 物質生産 / マクロファージ / 脂肪化 / 炎症 / 代謝物解析 / 代謝物 / メタボロミクス / 13Cグルコース / メタボローム解析 / バイオマーカー / 肺がん / オミクス計測 / 代謝 / 代謝アダプテーション / トランスオミクス / 代謝解析 / 代謝フラックス解析 / シミュレーション / がん細胞 / インシリコデザイン / 反応速度論 / ゲノムスケールモデル / ストレス耐性 / マルチオミクス / 進化工学 Less

Elucidation of the mechanism of macrophage function decline due to high-fat diet loading
- Principal Investigator
  
  吉田優
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 59040:Nutrition science and health science-related
- Research Institution
  University of Hyogo
Computer simulation of yeast metabolism by data-driven ensemble modelingPrincipal Investigator
- Principal Investigator
  
  松田史生
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 27040:Biofunction and bioprocess engineering-related
- Research Institution
  Osaka University
Identification and validation of PET-positive lung cancer-specific biomarkers
- Principal Investigator
  
  YOSHIDA MASARU
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 52010:General internal medicine-related
- Research Institution
  University of Hyogo
Quantitative proteomics for metabolic engieering of Saccharomyces cerevisiaePrincipal Investigator
- Principal Investigator
  
  Matsuda Fumio
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 27040:Biofunction and bioprocess engineering-related
- Research Institution
  Osaka University
人工水平遺伝子伝播による酵母の代謝進化プロセスの再構成Principal Investigator
- Principal Investigator
  
  松田史生
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Constructive Systems Biology
- Research Institution
  Osaka University
Development of Simulation System of Cancer Metabolism
- Principal Investigator
  
  SHIMIZU Hiroshi
- Project Period (FY)
  2017 – 2018
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Research Field
  
  Chemical engineering and related fields
- Research Institution
  Osaka University
Metabolic adaptation in drug resistancePrincipal Investigator
- Principal Investigator
  
  Matsuda Fumio
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Osaka University
Trans-omic analysis of metabolic adaptation
- Principal Investigator
  
  Kueoda Shinya
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Identification of Limiting Step and Optimization of Metabolism based on Analysis of Dynamic Behaviors of Multilayers Omics Data
- Principal Investigator
  
  SHIMIZU Hiroshi
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Biofunction/Bioprocess
- Research Institution
  Osaka University
Metabolic Engineering of yeast strains producing higher alcohols based on the precise metabolic characterizationPrincipal Investigator
- Principal Investigator
  
  Matsuda Fumio
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Biofunction/Bioprocess
- Research Institution
  Osaka University
Expansion of the central carbon metabolism in Saccharomyces cerevisiaePrincipal Investigator
- Principal Investigator
  
  MATSUDA Fumio
- Project Period (FY)
  2013 – 2014
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Biofunction/Bioprocess
- Research Institution
  Osaka University
Creation of Stress Tolerant Microbial Cell Factories based on Multiomics Analysis of Laboratory Evolution Process
- Principal Investigator
  
  SHIMIZU HIROSHI
- Project Period (FY)
  2012 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Biofunction/Bioprocess
- Research Institution
  Osaka University

All 2023 2022 2021 2020 2019 2018 2017 2016 2015 2014 2013 Other

All Journal Article Presentation Book Other

[Book] メタボロミクス実践ガイド2021
- Author(s)
  馬場　健史、平山　明由、松田　史生、津川　裕司
- Total Pages
  334
- Publisher
  羊土社
- ISBN
  4758122512
- Data Source
  KAKENHI-PLANNED-17H06303
[Book] メタボロミクス実践ガイド2021
- Author(s)
  馬場　健史、平山　明由、松田　史生、津川　裕司
- Total Pages
  334
- Publisher
  羊土社
- ISBN
  4758122512
- Data Source
  KAKENHI-PROJECT-18K04851
[Book] 代謝センシング　-健康,食,美容,薬,そして脳の代謝を知る-　第25章　動物培養細胞の13C代謝フラックス解析2018
- Author(s)
  岡橋伸幸、松田史生、清水浩
- Publisher
  シーエムシー出版
- ISBN
  9784781313504
- Data Source
  KAKENHI-PROJECT-17K19012
[Book] BIOTECHNOLOGY, Wiley-VCH book series, Weinheim, Vol 5: Applied Bioengineering: Innovations and Future Directions, Chapter 7, Omics integrations for the state analysis of microbial processes2017
- Author(s)
  Hiroshi Shimizu, Chikara Fursawa, Takashi Hirasawa, KatsunoriYoshikawa, Yoshihiro Toya, Tomokazu Shirai, and Fumio Matsuda
- Total Pages
  36
- Publisher
  Wiley-VCH
- Data Source
  KAKENHI-PROJECT-16H04576
[Journal Article] Improved 2,3-butanediol production rate of metabolically engineered Saccharomyces cerevisiae by deletion of RIM15 and activation of pyruvate consumption pathway.2023
- Author(s)
  Sugimura M, Seike T, Okahashi N, Izumi Y, Bamba T, Ishii J, Matsuda F*.
- Journal Title
  
  International Journal of Molecular Sciences
  
  Volume: 24(22) Issue: 22 Pages: 16378-16378
- DOI
  10.3390/ijms242216378
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K18924, KAKENHI-PLANNED-22H05185, KAKENHI-PROJECT-23K23147, KAKENHI-PROJECT-23K23151
[Journal Article] Improvement of ethanol and 2,3-butanediol production in Saccharomyces cerevisiae by ATP wasting2023
- Author(s)
  Yatabe Futa、Seike Taisuke、Okahashi Nobuyuki、Ishii Jun、Matsuda Fumio
- Journal Title
  
  Microbial Cell Factories
  
  Volume: 22 Issue: 1 Pages: 204-204
- DOI
  10.1186/s12934-023-02221-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K23147
[Journal Article] Data Processing of Product Ion Spectra: Quality Improvement by Averaging Multiple Similar Spectra of Small Molecules2022
- Author(s)
  Matsuda Fumio、Komori Shuka、Yamada Yuki、Hara Daiki、Okahashi Nobuyuki
- Journal Title
  
  Mass Spectrometry
  
  Volume: 11 Issue: 1 Pages: A0106-A0106
- DOI
  10.5702/massspectrometry.A0106
- ISSN
  2186-5116, 2187-137X
- Year and Date
  2022-12-15
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K23147
[Journal Article] Comparative 13C‐metabolic flux analysis indicates elevation of ATP regeneration, carbon dioxide, and heat production in industrial Saccharomyces cerevisiae strains2021
- Author(s)
  Yatabe Futa、Okahashi Nobuyuki、Seike Taisuke、Matsuda Fumio
- Journal Title
  
  Biotechnology Journal
  
  Volume: 17 Issue: 3 Pages: 2000438-2000438
- DOI
  10.1002/biot.202000438
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06303
[Journal Article] Random Transfer of Ogataea polymorpha Genes into Saccharomyces cerevisiae Reveals a Complex Background of Heat Tolerance2021
- Author(s)
  Seike Taisuke、Narazaki Yuki、Kaneko Yoshinobu、Shimizu Hiroshi、Matsuda Fumio
- Journal Title
  
  Journal of Fungi
  
  Volume: 7 Issue: 4 Pages: 302-302
- DOI
  10.3390/jof7040302
- Data Source
  KAKENHI-PROJECT-18K04851
[Journal Article] mfapy: An open-source Python package for 13C-based metabolic flux analysis2021
- Author(s)
  Matsuda Fumio、Maeda Kousuke、Taniguchi Takeo、Kondo Yuya、Yatabe Futa、Okahashi Nobuyuki、Shimizu Hiroshi
- Journal Title
  
  Metabolic Engineering Communications
  
  Volume: 13 Pages: e00177-e00177
- DOI
  10.1016/j.mec.2021.e00177
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06303
[Journal Article] Drought Stress Responses in Context-Specific Genome-Scale Metabolic Models of Arabidopsis thaliana2020
- Author(s)
  Siriwach Ratklao、Matsuda Fumio、Yano Kentaro、Hirai Masami Yokota
- Journal Title
  
  Metabolites
  
  Volume: 10 Issue: 4 Pages: 159-159
- DOI
  10.3390/metabo10040159
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-18H04808, KAKENHI-PLANNED-17H06303, KAKENHI-PUBLICLY-19H04870, KAKENHI-PUBLICLY-20H04852
[Journal Article] Monitoring and mathematical modeling of mitochondrial ATP in myotubes at single-cell level reveals two distinct population with different kinetics2020
- Author(s)
  N. Matsuda, K. Hironaka, M. Fujii, T. Wada, K. Kunida, H. Inoue, M. Eto, D. Hoshino, Y. Furuichi, Y. Manabe, N. L. Fujii, H. Noji, H. Imamura, S. Kuroda
- Journal Title
  
  Quantitative Biology
  
  Volume: 8 Issue: 3 Pages: 228-237
- DOI
  10.1007/s40484-020-0211-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-17H02159, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H03979
[Journal Article] Computational data mining method for isotopomer analysis in the quantitative assessment of metabolic reprogramming2020
- Author(s)
  Matsuda Fumio、Maeda Kousuke、Okahashi Nobuyuki
- Journal Title
  
  Scientific Reports
  
  Volume: 10 Issue: 1 Pages: 286-286
- DOI
  10.1038/s41598-019-57146-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06303
[Journal Article] Novel allosteric inhibition of phosphoribulokinase identified by ensemble kinetic modeling of Synechocystis sp. PCC 6803 metabolism2020
- Author(s)
  Nishiguchi Hiroki、Liao James、Shimizu Hiroshi、Matsuda Fumio
- Journal Title
  
  Metabolic Engineering Communications
  
  Volume: 11 Pages: e00153-e00153
- DOI
  10.1016/j.mec.2020.e00153
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H06559, KAKENHI-PLANNED-17H06303
[Journal Article] Comparison of metabolic profiles of yeasts based on the difference of the Crabtree positive and negative2020
- Author(s)
  Imura Makoto、Nitta Katsuaki、Iwakiri Ryo、Matsuda Fumio、Shimizu Hiroshi、Fukusaki Eiichiro
- Journal Title
  
  Journal of Bioscience and Bioengineering
  
  Volume: 129 Issue: 1 Pages: 52-58
- DOI
  10.1016/j.jbiosc.2019.07.007
- NAID
  40022128427
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K04851
[Journal Article] Transomics data-driven, ensemble kinetic modeling for system-level understanding and engineering of the cyanobacteria central metabolism2019
- Author(s)
  Nishiguchi Hiroki、Hiasa Natsuki、Uebayashi Kiyoka、Liao James、Shimizu Hiroshi、Matsuda Fumio
- Journal Title
  
  Metabolic Engineering
  
  Volume: 52 Pages: 273-283
- DOI
  10.1016/j.ymben.2019.01.004
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H06559, KAKENHI-PLANNED-17H06303
[Journal Article] Magnesium starvation improves production of malonyl-CoA-derived metabolites in Escherichia coli2019
- Author(s)
  Tokuyama Kento、Toya Yoshihiro、Matsuda Fumio、Cress Brady F.、Koffas Mattheos A.G.、Shimizu Hiroshi
- Journal Title
  
  Metabolic Engineering
  
  Volume: 52 Pages: 215-223
- DOI
  10.1016/j.ymben.2018.12.002
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H04576
[Journal Article] Fragmentation of Dicarboxylic and Tricarboxylic Acids in the Krebs Cycle Using GC-EI-MS and GC-EI-MS/MS2019
- Author(s)
  Okahashi Nobuyuki、Kawana Shuichi、Iida Junko、Shimizu Hiroshi、Matsuda Fumio
- Journal Title
  
  Mass Spectrometry
  
  Volume: 8 Issue: 1 Pages: A0073-A0073
- DOI
  10.5702/massspectrometry.A0073
- NAID
  130007697150
- ISSN
  2186-5116, 2187-137X
- Year and Date
  2019-08-30
- Language
  English
- Data Source
  KAKENHI-PLANNED-17H06303
[Journal Article] ime-resolved analysis of short term metabolic adaptation at dark transition in Synechocystis sp. PCC 68032019
- Author(s)
  Masaharu Maruyama, Hiroki Nishiguchi, Masakazu Toyoshima, Nobuyuki Okahashi, Fumio Matsuda, Hiroshi Shimizu
- Journal Title
  
  Journal of Bioscience and Bioengineering
  
  Volume: 印刷中 Issue: 4 Pages: 424-428
- DOI
  10.1016/j.jbiosc.2019.03.016
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06303
[Journal Article] Application of adaptive laboratory evolution to overcome a flux limitation in an Escherichia coli production strain2018
- Author(s)
  Tokuyama Kento、Toya Yoshihiro、Horinouchi Takaaki、Furusawa Chikara、Matsuda Fumio、Shimizu Hiroshi
- Journal Title
  
  Biotechnology and Bioengineering
  
  Volume: 115 Issue: 6 Pages: 1542-1551
- DOI
  10.1002/bit.26568
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K15052, KAKENHI-PROJECT-16H04576, KAKENHI-PROJECT-15J06350
[Journal Article] 13C-metabolic flux analysis of ethanol-assimilating Saccharomyces cerevisiae for S-adenosyl-L-methionine production2018
- Author(s)
  Kenshi Hayakawa, Fumio Matsuda, Hiroshi Shimizu
- Journal Title
  
  Microbial Cell Factories
  
  Volume: 17 Issue: 1 Pages: 82-82
- DOI
  10.1186/s12934-018-0935-6
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K04851, KAKENHI-PLANNED-17H06303
[Journal Article] Comparative analysis of fermentation and enzyme expression profiles among industrial Saccharomyces cerevisiae strains2018
- Author(s)
  Kiyoka Uebayashi, Hiroshi Shimizu, Fumio Matsuda
- Journal Title
  
  Applied Microbiology and Biotechnology
  
  Volume: 102 Issue: 16 Pages: 7071-7081
- DOI
  10.1007/s00253-018-9128-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K04851, KAKENHI-PLANNED-17H06303
[Journal Article] Mass Spectrometry-Based Method to Study Inhibitor-Induced Metabolic Redirection in the Central Metabolism of Cancer Cells2018
- Author(s)
  Araki Chie、Okahashi Nobuyuki、Maeda Kousuke、Shimizu Hiroshi、Matsuda Fumio
- Journal Title
  
  Mass Spectrometry
  
  Volume: 7 Issue: 1 Pages: A0067-A0067
- DOI
  10.5702/massspectrometry.A0067
- NAID
  130007396785
- ISSN
  2186-5116, 2187-137X
- Year and Date
  2018-06-14
- Language
  English
- Open Access
- Data Source
  KAKENHI-PROJECT-17K19012
[Journal Article] Expression of Saccharomyces cerevisiae cDNAs to enhance the growth of non-ethanol-producing S. cerevisiae strains lacking pyruvate decarboxylases2018
- Author(s)
  Yuki Narazaki, Yuta Nomura, Keisuke Morita, Hiroshi Shimizu, and Fumio Matsuda
- Journal Title
  
  Journal of Bioscience and Bioengineering
  
  Volume: 125 Issue: 3 Pages: 317-321
- DOI
  10.1016/j.jbiosc.2018.03.008
- NAID
  40021667154
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] Metabolic engineering of mevalonate-producing Escherichia coli strains based on thermodynamic analysis2018
- Author(s)
  Nagai Hikaru、Masuda Ami、Toya Yoshihiro、Matsuda Fumio、Shimizu Hiroshi
- Journal Title
  
  Metabolic Engineering
  
  Volume: 47 Pages: 1-9
- DOI
  10.1016/j.ymben.2018.02.012
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06303, KAKENHI-PROJECT-16H04576
[Journal Article] Sugar phosphate analysis with base line separation and soft ionization by gas chromatography-negative chemical ionization-mass spectrometry improves flux estimation of bidirectional reactions in cancer cells.2018
- Author(s)
  Nobuyuki Okahashi, Kousuke Maeda, Shuichi Kawana, Junko Iida, Hiroshi Shimizu, Fumio Matsuda
- Journal Title
  
  Metabolic Engineering
  
  Volume: 51 Pages: 43-49
- DOI
  10.1016/j.ymben.2018.08.011
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06303, KAKENHI-PROJECT-17H07368
[Journal Article] Heterologous expression of bacterial phosphoenol pyruvate carboxylase and Entner?Doudoroff pathway in Saccharomyces cerevisiae for improvement of isobutanol production2017
- Author(s)
  Morita Keisuke、Nomura Yuta、Ishii Jun、Matsuda Fumio、Kondo Akihiko、Shimizu Hiroshi
- Journal Title
  
  Journal of Bioscience and Bioengineering
  
  Volume: 124 Issue: 3 Pages: 263-270
- DOI
  10.1016/j.jbiosc.2017.04.005
- NAID
  40021323422
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] Metabolic engineering of isopropyl alcohol-producing Escherichia coli strains with 13C-metabolic flux analysis2017
- Author(s)
  Okahashi Nobuyuki、Matsuda Fumio、Yoshikawa Katsunori、Shirai Tomokazu、Matsumoto Yoshiko、Wada Mitsufumi、Shimizu Hiroshi
- Journal Title
  
  Biotechnolgy and Bioengineering
  
  Volume: 114 Issue: 12 Pages: 2782-2793
- DOI
  10.1002/bit.26390
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16H04576
[Journal Article] Learning from quantitative data to understand central carbon metabolism2017
- Author(s)
  Matsuda Fumio、Toya Yoshihiro、Shimizu Hiroshi
- Journal Title
  
  Biotechnology Advances
  
  Volume: 35 Issue: 8 Pages: 971-980
- DOI
  10.1016/j.biotechadv.2017.09.006
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06303, KAKENHI-PROJECT-16H04576
[Journal Article] 第4章-13 細胞内中心代謝フラックスの解析」できる・わかる生命科学の数理モデルとシミュレーション2017
- Author(s)
  松田史生
- Journal Title
  
  実験医学2017年3月増刊号
  
  Volume: 35 Pages: 207-210
- Data Source
  KAKENHI-PROJECT-16H04576
[Journal Article] Targeted proteome analysis of single-gene deletion strains of Saccharomyces cerevisiae lacking enzymes in the central carbon metabolism2017
- Author(s)
  Matsuda Fumio、Kinoshita Syohei、Nishino Shunsuke、Tomita Atsumi、Shimizu Hiroshi
- Journal Title
  
  PLoS ONE
  
  Volume: 12 Issue: 2 Pages: e0172742-e0172742
- DOI
  10.1371/journal.pone.0172742
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] Overexpressing enzymes of the Ehrlich pathway and deleting genes of the competing pathway in Saccharomyces cerevisiae for increasing 2-phenylethanol production from glucose2016
- Author(s)
  Li Shen, Yuya Nishimura, Fumio Matsuda, Jun Ishii, and Akihiko Kondo
- Journal Title
  
  J. Biosci. Bioeng.
  
  Volume: 122 Issue: 1 Pages: 34-39
- DOI
  10.1016/j.jbiosc.2015.12.022
- NAID
  40020885810
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] 13C-metabolic flux analysis for mevalonate producing Escherichia coli2016
- Author(s)
  Keisuke Wada, Yoshihiro Toya, Satomi Banno, Katsunori Yoshikawa, Fumio Matsuda, Hiroshi Shimizu
- Journal Title
  
  Journal of Bioscience and Bioengineering
  
  Volume: 123 Issue: 2 Pages: 177-182
- DOI
  10.1016/j.jbiosc.2016.08.001
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-16H04576
[Journal Article] Regular expressions of MS/MS spectra for partial annotation of metabolite features2016
- Author(s)
  Fumio Matsuda
- Journal Title
  
  Metabolomics
  
  Volume: 12 Issue: 7 Pages: 1-14
- DOI
  10.1007/s11306-016-1052-3
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] Technical Challenges in Mass Spectrometry-Based Metabolomics2016
- Author(s)
  Fumio Matsuda
- Journal Title
  
  Mass Spectrometry
  
  Volume: 5 Issue: 2 Pages: S0052-S0052
- DOI
  10.5702/massspectrometry.S0052
- NAID
  130005285734
- ISSN
  2186-5116, 2187-137X
- Language
  English
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] Eliminating the isoleucine biosynthetic pathway to reduce competitive carbon outflow during isobutanol production by Saccharomyces cerevisiae2015
- Author(s)
  Kengo Ida, Jun Ishii, Fumio Matsuda, Takashi Kondo, Akihiko Kondo
- Journal Title
  
  Microbial Cell Factories
  
  Volume: 14 Issue: 1 Pages: 62-62
- DOI
  10.1186/s12934-015-0240-6
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] Absolute quantitation of glycolytic intermediates reveals thermodynamic shifts in Saccharomyces cerevisiae strains lacking PFK1 or ZWF1 genes2015
- Author(s)
  Shunsuke Nishino, Nobuyuki Okahashi, Fumio Matsuda, and Hiroshi Shimizu
- Journal Title
  
  J. Biosci. Bioeng.
  
  Volume: 70 Issue: 3 Pages: 280-286
- DOI
  10.1016/j.jbiosc.2015.01.012
- NAID
  110009987505
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25820400
[Journal Article] 13C-metabolic flux analysis in S-adenosyl-L-methionine production by Saccharomyces cerevisiae.2015
- Author(s)
  Kenshi Hayakawa, Shuichi Kajihata, Fumio Matsuda, Hiroshi Shimizu
- Journal Title
  
  Journal of Bioscience and Bioengneering
  
  Volume: 120 Issue: 5 Pages: 532-8
- DOI
  10.1016/j.jbiosc.2015.03.010
- NAID
  210000005141
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K06579
[Journal Article] 13C-based metabolic flux analysis of Saccharomyces cerevisiae with a reduced Crabtree effect2015
- Author(s)
  Shuichi Kajihata, Fumio Matsuda, Mika Yoshimi, Kenshi Hayakawa, Chikara Furusawa, Akihisa Kanda, Hiroshi Shimizu
- Journal Title
  
  J Biosci Bioeng
  
  Volume: 120 Issue: 2 Pages: 140-144
- DOI
  10.1016/j.jbiosc.2014.12.014
- NAID
  210000005080
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24246134
[Journal Article] Three gene expression vector sets for concurrently expressing multiple genes in Saccharomyces cerevisiae2014
- Author(s)
  石井純、近藤貴志、松田史生、近藤昭彦
- Journal Title
  
  FEMS Yeast research
  
  Volume: 14 Issue: 3 Pages: 399-411
- DOI
  10.1111/1567-1364.12138
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25820400
[Journal Article] Increased isobutanol production in Saccharomyces cerevisiae by eliminating competing pathways and resolving cofactor imbalance2013
- Author(s)
  松田史生、石井純、近藤貴志、伊田賢吾、手塚裕紀、近藤昭彦
- Journal Title
  
  Microbial Cell Factories
  
  Volume: 12 Issue: 1 Pages: 119-119
- DOI
  10.1186/1475-2859-12-119
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25820400
[Journal Article] Regulation of central carbon metabolism in Saccharomyces cerevisiae by metabolic inhibitors2013
- Author(s)
  松田史生、白井智量、石井純、近藤昭彦
- Journal Title
  
  J. Biosci. Bioeng.
  
  Volume: 116 Issue: 1 Pages: 59-64
- DOI
  10.1016/j.jbiosc.2013.01.018
- NAID
  110009634746
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25820400
[Journal Article] Method for assessing the statistical significance of mass spectral similarities using basic local alignment search tool statistics2013
- Author(s)
  松田史生、福崎英一郎
- Journal Title
  
  Analytical Chemistry
  
  Volume: 85 Issue: 17 Pages: 8291-8217
- DOI
  10.1021/ac401564v
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25820400, KAKENHI-PROJECT-25871136
[Presentation] 13C-metabolic flux analysis of central carbon metabolism of industrial budding yeast strains using GC-MS2023
- Author(s)
  Fumio Matsuda, Futa Yatabe, Nobuyuki Okahashi
- Organizer
  AOMSC-KSMS 2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] 協会系酵母とは異なる系統に属する清酒酵母の高発酵性メカニズムの解明2023
- Author(s)
  森光太郎　清家泰介　山田翼　田中伸哉　松田史生
- Organizer
  第75回日本生物工学会大会
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] 質量分析法を用いたメタボロミクス再考2023
- Author(s)
  松田史生
- Organizer
  第71回質量分析総合討論会2023
- Invited
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] 炭素源多様化に向けた酵母のメタボローム比較解析2023
- Author(s)
  神山歩夢　清家泰介　松田史生
- Organizer
  第75回日本生物工学会大会
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] 人工代謝経路をファインチューニングするための代謝動的シミュレーション技術2022
- Author(s)
  松田史生
- Organizer
  一般社団法人先端バイオ工学推進機構「化学・素材・燃料分科会」第 15 回会合講演会
- Invited
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] 油脂酵母L. starkeyiのターゲットプロテオミクスによる油脂生産鍵酵素酵素の探索2022
- Author(s)
  岩倉崇文、清家泰介、岡橋伸幸、佐藤里佳子、高久洋暁、松田史生
- Organizer
  第45回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] バイオDX人材になる方法2022
- Author(s)
  松田史生
- Organizer
  関西支部若手企画シンポジウム「生物工学×AI＝∞　～生物工学におけるAI活用術～」
- Invited
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] メタボローム分析によるバイオアルコール生産改変出芽酵母の代謝律速点の推定2022
- Author(s)
  杉村政彦、清家泰介、岡橋伸幸、石井純、松田史生
- Organizer
  第16回メタボロームシンポジウム
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] アミノ酸添加培地で培養した出芽酵母の13C 代謝フラックス解析2022
- Author(s)
  藤原逸人、岡橋伸幸、松田史生
- Organizer
  第74回日本生物工学会大会
- Data Source
  KAKENHI-PROJECT-23K23147
[Presentation] 4ヒドロキシタモキシフェン処理後の乳がん細胞株MCF-7は脂質合成と還元的グルタミン代謝を促進する2021
- Author(s)
  西本和生丸山正晴荒木千絵岡橋伸幸松田史生
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] LC-MS/MSを用いた代謝物濃度測定法の拡張と出芽酵母実用株への適用2021
- Author(s)
  杉村政彦, 岡橋伸幸, 清家泰介, 和泉自泰, 馬場健史,松田史生
- Organizer
  第69回質量分析総合討論会（オンライン）
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 実用酵母株の代謝フラックス解析による発酵能力と代謝熱の関連の解析2021
- Author(s)
  谷田部楓太, 岡橋伸幸, 清家泰介, ○松田史生
- Organizer
  日本農芸化学会2021年度大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] ヒト乳がん細胞の中心炭素代謝プロテオーム解析法の検討2021
- Author(s)
  高橋遼, 西本和生, 岡橋伸幸, 松本雅記, 松田史生
- Organizer
  第69回質量分析総合討論会（オンライン）
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Ensemble kinetic modeling using INST-13C-MFA data identifies novel allosteric inhibition of phosphoribulokinase in Synechocystis sp. PCC 68032021
- Author(s)
  Fumio Matsuda, Hiroki Nishiguchi, James Liao, Hiroshi Shimizu
- Organizer
  Metabolic engineering 14
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] ターゲットプロテオミクスの改良と酵素発現量に基づく細胞株の代謝評価2021
- Author(s)
  高橋遼, 西本和生, 岡橋伸幸, 松田史生
- Organizer
  第73回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 油脂酵母の増殖期と油脂生産期の13C代謝フラックス解析2021
- Author(s)
  松尾有紗, 岡橋伸幸, 清家泰介, 松田史生
- Organizer
  第73回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 代謝フラックス解析による実用酵母株の代謝熱と低温耐性の関連解析2021
- Author(s)
  谷田部楓太, 岡橋伸幸, 清家泰介, 松田史生
- Organizer
  第54回酵母遺伝学フォーラム
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] ギブス自由エネルギー変化を用いた実用酵母株の代謝解析2021
- Author(s)
  杉村政彦, 清家泰介, 岡橋伸幸, 松田史生
- Organizer
  第73回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 代謝フラックス解析による出芽酵母実用株の発酵能力と代謝熱の比較解析2021
- Author(s)
  谷田部楓太岡橋伸幸清家泰介松田史生
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 大腸がん細胞株の窒素代謝経路の同位体非定常15N代謝フラックス解析2021
- Author(s)
  村上慶多近藤佑哉岡橋伸幸松田史生
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 13C代謝フラックス解析を用いた乳がん細胞株の中心炭素代謝比較2021
- Author(s)
  近藤佑哉岡橋伸幸松田史生
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 同位体非定常15N代謝フラックス解析法の開発と大腸がん細胞株の窒素代謝経路への応用2021
- Author(s)
  村上慶多, 近藤佑哉, 岡橋伸幸, 松田史生
- Organizer
  第73回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 呼吸鎖阻害に対するがん細胞と出芽酵母の代謝アダプテーション解析2021
- Author(s)
  澤井茜清家泰介岡橋伸幸和泉自泰馬場健史松田史生
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 実用酵母株の代謝フラックス解析による発酵能力と代謝熱の関連の解析2020
- Author(s)
  谷田部楓太, 岡橋伸幸, 清家泰介, 松田史生
- Organizer
  日本農芸化学会2021年度大会
- Data Source
  KAKENHI-PROJECT-18K04851
[Presentation] 呼吸鎖阻害剤を処理した乳がん細胞株MCF-7の時系列メタボローム解析2020
- Author(s)
  澤井茜辻周真岡橋伸幸松田史生
- Organizer
  第68回質量分析総合討論会（大阪）
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 質量分析を用いた大腸がん細胞株の13Ｃ代謝フラックス解析2020
- Author(s)
  近藤佑哉島知輝岡橋伸幸松田史生
- Organizer
  第68回質量分析総合討論会（大阪）
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Mining and visualization of isotopomer analysis data for the quantitative assessment of metabolic flux reprogramming2020
- Author(s)
  Fumio Matsuda, Kousuke Maeda, Nobuyuki Okahashi
- Organizer
  68th ASMS Conference on Mass Spectrometry and Allied Topics
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Investigation of metabolic responses in MCF-7 after treatment with 4-hydroxytamoxifen using time-series metabolomics2020
- Author(s)
  西本和生丸山正晴岡橋伸幸松田史生
- Organizer
  Metabolomics2020
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Metabolic adaptation analysis of the inhibition of oxidative phosphorylation using time-series metabolomics and lipidomics2020
- Author(s)
  Nobuyuki Okahashi, Shuma Tsuji, Junko Iida, Tairo Ogura, Fumio Matsuda
- Organizer
  68th ASMS Conference on Mass Spectrometry and Allied Topics
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 時系列メタボローム解析を用いたがん細胞薬剤応答の解明2020
- Author(s)
  西本和生丸山正晴岡橋伸幸松田史生
- Organizer
  第68回質量分析総合討論会（大阪）
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 細胞構成成分の測定による13C代謝フラックス解析の高精度化2020
- Author(s)
  谷田部楓太岡橋伸幸松田史生
- Organizer
  第68回質量分析総合討論会（大阪）
- Data Source
  KAKENHI-PROJECT-18K04851
[Presentation] 薬剤処理に対する動物培養細胞の動的代謝応答の解析2019
- Author(s)
  丸山正晴、荒木千絵、岡橋伸幸、松田史生
- Organizer
  019年度生物工学若手研究者の集い（若手会）夏のセミナー
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 13C代謝フラックス解析を用いた非上皮系細胞株の定量的代謝比較2019
- Author(s)
  島知輝・丸山正晴・岡橋伸幸・松田史生
- Organizer
  第71回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] ロテノン処理に対するヒト乳がん細胞株MCF-7の代謝アダプテーション解析2019
- Author(s)
  辻周真, 丸山正晴, 和泉自泰, 馬場健史, 岡橋伸幸, 松田史生
- Organizer
  第71回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 13C-代謝フラックス解析を用いた薬剤耐性代謝アダプテーション機構の解析2019
- Author(s)
  松田史生
- Organizer
  第92回日本生化学会大会
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] トランスオミクスによる出芽酵母の中心炭素代謝制御機構の解明2019
- Author(s)
  山崎一輝, 丸山正晴, 西野駿佑, 岡橋伸幸, 清水浩, 松田史生
- Organizer
  第71回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] How to use targeted proteomics in synthetic and systems biology2019
- Author(s)
  Fumio Matsuda
- Organizer
  Asian Synthetic Biology Association 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 出芽酵母の代謝制御機構解明のための相関ネットワークの構築2019
- Author(s)
  山崎一輝, 丸山正晴, 西野駿佑, 岡橋伸幸, 清水浩, 松田史生
- Organizer
  第42回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 代謝プロファイル時系列分によるがん薬剤耐性化機構の解明2019
- Author(s)
  丸山正晴、荒木千絵、岡橋伸幸、松田史生
- Organizer
  第67回質量分析総合討論会（2019,つくば）
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Trans omics analysis of metabolic rewiring in inhibitor treated cancer cells by integrating 13C metabolic flux and metabolome analyses2019
- Author(s)
  Fumio Matsuda
- Organizer
  The 29th Hot Spring Harbor International Symposium Cutting Edge of Technical Innovations in Trans Omics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Trans-omic analysis of the central metabolism of Saccharomyces cerevisiae by integration of metabolome, metabolic flux, and proteome data2019
- Author(s)
  Fumio Matsuda, Kazuki Yamazaki, Shunsuke Nishino, Hiroshi Shimizu
- Organizer
  International Conference of Systemes Biology 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Trans-omic analysis of the central metabolism of Saccharomyces cerevisiae by integration of metabolome, metabolic flux, and proteome data2019
- Author(s)
  Fumio Matsuda, Kazuki Yamazaki, Shunsuke Nishino, Hiroshi Shimizu
- Organizer
  International Conference of Systemes Biology 2019
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K04851
[Presentation] 出芽酵母中心代謝の計測と応用2019
- Author(s)
  松田史生
- Organizer
  第116回醗酵学懇話会
- Invited
- Data Source
  KAKENHI-PROJECT-18K04851
[Presentation] 質量分析を用いたがん代謝の計測ー非上皮性細胞由来がんの代謝フラックス解析2019
- Author(s)
  島知輝、丸山正晴、岡橋伸幸、松田史生
- Organizer
  第67回質量分析総合討論会（2019,つくば）
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 13C-Metabolic flux analysis of inhibitor-induced metabolic redirection in the central metabolism of breast cancer cells2019
- Author(s)
  Chie Araki, Nobuyuki Okahashi, Kousuke Maeda, Hiroshi Shimizu, and Fumio Matsuda
- Organizer
  67th ASMS Conference on Mass Spectrometry and Allied Topics
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 乳がん細胞MCF-7の呼吸鎖阻害剤処理に対する代謝アダプテーションの解析2019
- Author(s)
  岡橋伸幸辻周真小倉泰郎飯田順子松田史生
- Organizer
  第13回メタボロームシンポジウム
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 増殖連動型物質生産のin silico解析における反応律速点の同定法の開発と実験検証2018
- Author(s)
  清水浩、徳山健斗、戸谷吉博、松田史生
- Organizer
  化学工学会第50回秋季大会
- Data Source
  KAKENHI-PROJECT-16H04576
[Presentation] Baseline separation of intracellular sugar phosphates by GC-NCI-MS and its application to 13C-metabolic flux analysis of cancer cells2018
- Author(s)
  Nobuyuki Okahashi, Kousuke Maeda, Shuichi Kawana, Hiroshi Shimizu, Junko Iida, and Fumio Matsuda
- Organizer
  66th ASMS Conference on Mass Spectrometry and Allied Topics
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Trans-omic analysis of the central metabolism of Saccharomyces cerevisiae by integration of metabolome, metabolic flux, and proteome data2018
- Author(s)
  Fumio Matsuda, Shunsuke Nishino, Hiroshi Shimizu
- Organizer
  Metabolic Engineering 12
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 出芽酵母中心代謝は教科書通り動いているのか？2018
- Author(s)
  松田　史生
- Organizer
  酵母合同シンポジウム
- Invited
- Data Source
  KAKENHI-PROJECT-18K04851
[Presentation] Expanding the space of actual metabolic network in Escherichia coli by adaptive laboratory evolution2018
- Author(s)
  Tokuyama Kento、Toya Yoshihiro、 Horinouchi Takaaki,、Furusawa Chikara、Matsuda Fumio、Shimizu Hiroshi
- Organizer
  Metabolic Engineering 12
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H04576
[Presentation] 13C-Metabolic flux analysis of the central carbon metabolism in three cancer cell lines2018
- Author(s)
  Uehara Hikaru,、Araki Chie、Maeda Kousuke、Okahashi Nobuyuki、Matsuda Fumio、Shimizu Hiroshi
- Organizer
  YABEC2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K19012
[Presentation] 13C代謝フラックス解析による動物培養細胞の代謝リワイアリングの定量2018
- Author(s)
  荒木千絵, 岡橋伸幸, 清水浩, 松田史生
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 13C代謝フラックス解析によるp53代謝リワイアリングの定量的解析2018
- Author(s)
  岡橋伸幸, 河野晋, 高橋智聡, 清水浩, 松田史生
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] ロテノン処理に対する代謝アダプテーション2018
- Author(s)
  辻周真, 丸山正晴, 荒木千絵, 岡橋伸幸, 松田史生
- Organizer
  第12回メタボロームシンポジウム
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Transomics data-driven, ensemble kinetic modeling of the central metabolism2018
- Author(s)
  Fumio Matsuda
- Organizer
  Asian Synthetic Biology Association 2018
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] がん種の異なる細胞間での中心代謝における13C代謝フラックス解析2018
- Author(s)
  上原ひかる、荒木千絵、前田昂亮、岡橋伸幸、松田史生、高橋智聡、清水浩
- Organizer
  第70回日本生物工学会大会
- Data Source
  KAKENHI-PROJECT-17K19012
[Presentation] ピルビン酸代謝フローの転換による出芽酵母2,3-ブタンジオール生産性の向上2017
- Author(s)
  森田啓介、松田史生、岡本浩二、石井純、近藤昭彦、清水浩
- Organizer
  第69回日本生物工学会大会
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] 代謝フラックスレベルでの動物培養細胞中心代謝の解析2017
- Author(s)
  松田史生、前田昂亮、荒木千絵、上原ひかる、岡橋伸幸、清水浩
- Organizer
  メタボロームシンポジウム2017
- Invited
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] がん細胞株間の中央代謝フラックス比較2017
- Author(s)
  上原ひかる、荒木千絵、前田昂亮、岡橋伸幸、松田史生、清水浩
- Organizer
  メタボロームシンポジウム2017
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] マイトファジー抑制による出芽酵母の細胞質物質生産能力向上2017
- Author(s)
  森田啓介、松田史生、岡本浩二、石井純、近藤昭彦、清水浩
- Organizer
  日本農芸化学会2017年度大会
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] パクリタキセル処理に対するヒト乳がん由来細胞株MCF-7の代謝アダプテーション2017
- Author(s)
  荒木千絵、前田昂亮、岡橋伸幸、松田史生、清水浩
- Organizer
  メタボロームシンポジウム2017
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] マイトファジー抑制による出芽酵母の細胞質物質生産能力向上2017
- Author(s)
  森田啓介、松田史生、岡本浩二、石井純、近藤昭彦、清水浩
- Organizer
  日本農芸化学会 2017 大会
- Place of Presentation
  京都女子大学
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] 代謝物濃度絶対定量値を用いたエタノール生産シアノバクテリア代謝律速点の解析2017
- Author(s)
  西口　大貴、永井　暉、松田　史生、清水　浩
- Organizer
  第69回日本生物工学会大会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 抗がん剤処理によるがん細胞代謝フラックス変動の解析2017
- Author(s)
  荒木千絵、前田昂亮、岡橋伸幸、松田史生、清水浩
- Organizer
  第5回がんと代謝研究会
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 代謝物絶対定量データを用いたシアノバクテリアの動的代謝モデル構築2017
- Author(s)
  西口　大貴、永井　暉、松田　史生、清水　浩
- Organizer
  メタボロームシンポジウム2017
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] 13C代謝フラックス解析による細胞の生理状態の理解と工学応用2017
- Author(s)
  清水浩, 松田史生, 戸谷吉博, 岡橋伸幸, 前田昂亮
- Organizer
  化学工学会第49回秋季大会
- Data Source
  KAKENHI-PROJECT-16H04576
[Presentation] 計測に基づく中心代謝調節機構の解析2017
- Author(s)
  松田史生
- Organizer
  JBA　発酵と代謝研究会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06303
[Presentation] Heterologous gene expression in Saccharomyces cerevisiae for higher isobutanol production2016
- Author(s)
  Keisuke MORITA, Fumio MATSUDA, Jun ISHII, Akihiko KONDO, Hiroshi SHIMIZU
- Organizer
  Metabolic Engineering XI
- Place of Presentation
  淡路夢舞台
- Year and Date
  2016-06-26
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] 細胞質バリン生合成経路の異種発現による出芽酵母イソブタノール生産性の向上2016
- Author(s)
  森田啓介、松田史生、石井純、近藤昭彦、清水浩
- Organizer
  日本農芸化学会2016年度大会
- Place of Presentation
  札幌コンベンションセンター
- Year and Date
  2016-03-27
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] Enzyme co-expression analysis revealed a metabolic safety device on the central metabolism of Saccharomyces cerevisiae2016
- Author(s)
  Fumio Matsuda, Atsumi Tomita, and Hiroshi Shimizu
- Organizer
  14th International Congress on Yeasts
- Place of Presentation
  淡路夢舞台
- Year and Date
  2016-09-11
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] 大腸菌による効率的なメバロン酸生産のための代謝解析2016
- Author(s)
  戸谷吉博、和田圭介、増田亜美、徳山健斗、坂野聡美、吉川勝徳、松田史生、清水浩
- Organizer
  化学工学会第48回秋季大会
- Place of Presentation
  徳島大学　常三島キャンパス（徳島県徳島市）
- Year and Date
  2016-09-06
- Data Source
  KAKENHI-PROJECT-16H04576
[Presentation] 13C-Metabolic Flux Analysis for Mevalonate-Producing Strain of Escherichia coli.2016
- Author(s)
  Wada, K., Toya, Y., Matsuda, F. and Shimizu, H.
- Organizer
  Metabolic Engineering 11
- Place of Presentation
  Awaji Yumebutai（兵庫県淡路市）
- Year and Date
  2016-06-26
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H04576
[Presentation] 定量プロテオミクスを用いた出芽酵母中心代謝安定化機構の解析2016
- Author(s)
  松田史生、富田淳美、清水浩
- Organizer
  第68回日本生物工学会大会
- Place of Presentation
  富山国際会議場
- Year and Date
  2016-09-28
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] イソブタノール生産酵母の構築：オルガネラ局在の検討2016
- Author(s)
  森田啓介、松田史生、伊田賢吾、石井純、近藤昭彦、清水浩
- Organizer
  第68回日本生物工学会大会
- Place of Presentation
  富山国際会議場
- Year and Date
  2016-09-28
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] 2,3-ブタンジオール高生産出芽酵母株の構築2016
- Author(s)
  松田史生、伊田賢吾、木下翔平、森田啓介、石井寛子、石井純、近藤昭彦、清水浩
- Organizer
  日本農芸化学会2016年度大会
- Place of Presentation
  札幌コンベンションセンター
- Year and Date
  2016-03-27
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] メバロン酸生産大腸菌の細胞内代謝状態の定量的な評価2016
- Author(s)
  永井暉, 戸谷吉博, 松田史生, 清水浩
- Organizer
  第68回日本生物工学会大会（2016）
- Place of Presentation
  冨山国際会議場　ANAクラウンプラザホテル富山（富山県富山市）
- Year and Date
  2016-09-28
- Data Source
  KAKENHI-PROJECT-16H04576
[Presentation] Metabolic flux measurement for efficient mevalonate production in Escherichia coli2016
- Author(s)
  Yoshihiro Toya, Keisuke Wada, Ami Masuda, Kento Tokuyama, Satomi Banno, Katsunori Yoshikawa, Fumio Matsuda, Hiroshi Shimizu
- Organizer
  i-BioP2016
- Place of Presentation
  Haeundae Grand Hotel , Busan, South Korea
- Year and Date
  2016-12-16
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H04576
[Presentation] Engineering of mitochondrial isobutanol production in Saccharomyces cerevisiae2016
- Author(s)
  Keisuke Morita, Fumio Matsuda, Koji Okamoto, Kengo Ida, Jun Ishii, Akihiko Kondo, Hiroshi Shimizu
- Organizer
  14th International Congress on Yeasts
- Place of Presentation
  淡路夢舞台
- Year and Date
  2016-09-11
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K06579
[Presentation] 代謝フラックスを基盤とする物質生産法の開発2016
- Author(s)
  清水　浩、松田　史生、戸谷　吉博
- Organizer
  2016年農芸化学会
- Place of Presentation
  札幌教育文化会館大ホール（北海道札幌市）
- Year and Date
  2016-03-27
- Invited
- Data Source
  KAKENHI-PROJECT-24246134
[Presentation] 大腸菌代謝フラックス解析の実験デザインの最適化2015
- Author(s)
  前田昂亮、岡橋伸幸、松田史生、清水浩
- Organizer
  第67回日本生物工学会大会（2015）
- Place of Presentation
  城山観光ホテル（鹿児島県鹿児島市）
- Year and Date
  2015-10-26
- Data Source
  KAKENHI-PROJECT-24246134
[Presentation] 長期継代培養によるエタノール非生産酵母増殖改善株の取得2015
- Author(s)
  森田啓介、富田淳美、松田史生、清水浩
- Organizer
  日本農芸化学会2015年度大会
- Place of Presentation
  岡山大学
- Year and Date
  2015-03-28
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] Synechocystis sp. PCC 6803光化学系の定量プロテオーム分析系の構築2015
- Author(s)
  植林希代加、松田史生、日浅夏希、小倉泰郎、平野一郎、清水浩
- Organizer
  ラン藻の分子生物学2015
- Place of Presentation
  かずさアカデミアホール（千葉県木更津市）
- Year and Date
  2015-11-16
- Data Source
  KAKENHI-PROJECT-24246134
[Presentation] 13C代謝フラックス解析に用いる13C標識炭素源の最適化2015
- Author(s)
 前田昂亮、岡橋伸幸、松田史生、清水浩
- Organizer
 日本質量分析学会第63回質量分析総合討論会 2015
- Place of Presentation
 つくば国際会議場エポカルつくば（茨城県つくば市）
- Year and Date
 2015-06-17
- Data Source
 KAKENHI-PROJECT-24246134
[Presentation] 光合成微生物Synechocystis sp. PCC 6803中心代謝酵素の定量プロテオミクス2015
- Author(s)
 日浅夏希、松田史生、小倉泰郎、平野一郎、清水浩
- Organizer
 日本質量分析学会第63回質量分析総合討論会 2015
- Place of Presentation
 つくば国際会議場エポカルつくば（茨城県つくば市）
- Year and Date
 2015-06-17
- Data Source
 KAKENHI-PROJECT-24246134
[Presentation] ＥＤ経路導入による酵母中心代謝経路の拡張2014
- Author(s)
  森田啓介、梶畠秀一、石井純、松田史生、清水浩
- Organizer
  日本農芸化学会2014年度大会
- Place of Presentation
  明治大学生田キャンパス
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] Integrated targeted metabolome and proteome analysis for dissecting energy metabolism in yeast2014
- Author(s)
  松田史生、西野俊介、小倉泰郎、岡橋伸幸、富田淳美、平野一郎、清水浩
- Organizer
  International Metabolome Conference 2014
- Place of Presentation
  鶴岡
- Year and Date
  2014-06-24
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] 代謝シミュレーションにもとづく酵母イソブタノール生産能の向上2014
- Author(s)
  松田史生、石井純、近藤貴志、伊田賢吾、手塚裕紀、近藤昭彦
- Organizer
  日本農芸化学会2014年度大会
- Place of Presentation
  明治大学生田キャンパス
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] 酵母中心代謝物質の絶対定量2014
- Author(s)
  西野　駿佑, 岡橋　伸幸, 木下　翔平, 松田　史生, 清水　浩
- Organizer
  第66回日本生物工学会大会
- Place of Presentation
  札幌
- Year and Date
  2014-09-12
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] 質量分析による中心代謝の解析2014
- Author(s)
  松田史生
- Organizer
  BMSカンファレンス2014
- Place of Presentation
  金沢
- Year and Date
  2014-07-08
- Invited
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] イソブタノール生産酵母におけるトランスヒドロゲナーゼ様シャントの活性化2013
- Author(s)
  石井純、松田史生、近藤貴志、近藤昭彦
- Organizer
  第65回日本生物工学会大会
- Place of Presentation
  広島国際会議場
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] 推定値の信頼区間の算出機能を組み込んだ13C代謝フラックス解析情報ソフトウェアの開発2013
- Author(s)
  梶畠秀一、松田史生、清水浩
- Organizer
  第65回日本生物工学会大会
- Place of Presentation
  広島国際会議場
- Data Source
  KAKENHI-PROJECT-25820400
[Presentation] フラックスバランス解析に基づく有用物質生産微生物の構築
- Author(s)
  清水　浩、吉川　勝徳、古澤力、平沢　敬、戸谷　吉博、松田　史生
- Organizer
  第46回化学工学会秋季大会
- Place of Presentation
  九州大学　伊都キャンパス，福岡
- Year and Date
  2014-09-17 – 2014-09-19
- Data Source
  KAKENHI-PROJECT-24246134
[]
[]

1. SHIMIZU HIROSHI (00226250)

# of Collaborated Projects: 3 results

# of Collaborated Products: 23 results
2. TOYA YOSHIHIRO (70582162)

# of Collaborated Projects: 3 results

# of Collaborated Products: 12 results
3. ISHII Jun (40512546)

# of Collaborated Projects: 2 results

# of Collaborated Products: 17 results
4. YOSHIDA MASARU (00419475)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
5. 和泉自泰 (70622166)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
6. MORITA Keisuke

# of Collaborated Projects: 2 results

# of Collaborated Products: 12 results
7. NOMURA Yuta

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
8. FURUSAWA CHIKARA (00372631)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
9. HIRASAWA TAKASHI (20407125)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
10. YOSHIKAWA KATSUNORI (20599279)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
11. Kueoda Shinya (50273850)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 角田達彦 (10273468)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 岡田眞里子 (10342833)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 馬場健史 (10432444)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 鈴木穣 (40323646)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 伊藤隆司 (90201326)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. 中山敬一 (80291508)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. 西海信 (20514706)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. 大槻純男 (60323036)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
20. 岡橋伸幸 (30802748)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
21. 清家泰介 (80760842)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
22. NISHINO Shunsuke

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
23. KINOSHITA Shohei

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
24. Takahashi Chihiro

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
25. 平井優美

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
26. 堀之内貴明

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
27. 藤井雅史

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

MATSUDA Fumio 松田 史生

Research Projects

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Co-Researchers

Elucidation of the mechanism of macrophage function decline due to high-fat diet loading

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Computer simulation of yeast metabolism by data-driven ensemble modelingPrincipal Investigator

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Identification and validation of PET-positive lung cancer-specific biomarkers

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Quantitative proteomics for metabolic engieering of Saccharomyces cerevisiaePrincipal Investigator

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人工水平遺伝子伝播による酵母の代謝進化プロセスの再構成Principal Investigator

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Development of Simulation System of Cancer Metabolism

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Metabolic adaptation in drug resistancePrincipal Investigator

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Trans-omic analysis of metabolic adaptation

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Identification of Limiting Step and Optimization of Metabolism based on Analysis of Dynamic Behaviors of Multilayers Omics Data

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Metabolic Engineering of yeast strains producing higher alcohols based on the precise metabolic characterizationPrincipal Investigator

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Expansion of the central carbon metabolism in Saccharomyces cerevisiaePrincipal Investigator

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Creation of Stress Tolerant Microbial Cell Factories based on Multiomics Analysis of Laboratory Evolution Process

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[Book] メタボロミクス実践ガイド2021

Author(s)

Total Pages

Publisher

MATSUDA Fumio 松田史生

[Book] 代謝センシング　-健康,食,美容,薬,そして脳の代謝を知る-　第25章　動物培養細胞の13C代謝フラックス解析2018