SAITO Minoru 斎藤稔

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斉藤稔サイトウミノル

斎藤稔サイトウミノル

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Researcher Number	60196011
External Links
Affiliation (based on the past Project Information) *help	2011 – 2013: 弘前大学, 理工学研究科, 教授 2007 – 2010: Hirosaki University, 大学院・理工学研究科, 教授 2009: 弘前大学, 理工学部, 教授 2008: 弘前大学, 理工学研究科, 教授 2005 – 2007: 弘前大学, 理工学部, 教授 1999 – 2003: 弘前大学, 理工学部, 教授
Review Section/Research Field	Principal Investigator Science and Engineering / Bioinformatics/Life informatics / Biological Sciences / 基礎ゲノム科学 / ポストゲノムのナノサイエンス / Biophysics Except Principal Investigator Bioproduction chemistry/Bioorganic chemistry / Structural biochemistry / Living organism molecular science
Keywords	Principal Investigator 分子動力学シミュレーション / 蛋白質 / アミノ酸置換 / 自由エネルギー計算 / 熱安定性 / 変性状態 / 天然状態 / protein / molecular dynamics simulation / 並列計算機 … More / シミュレーション / 結合自由エネルギー / 予測 / 酵素反応 / force field parameter / quasi canonical orbital / localized orbital / ab initio all electron calculation / atomic charge / 力場パラメタ / 疑似カノニカル分子軌道 / 局在化軌道 / 非経験的全電子計算 / 原子電荷 / molecular substitution / MD simulation / free energy calculation / binding affinity / DNA binding protein / computer experiment / 塩基配列の認識 / 塩基置換 / 塩基配列 / DNA / 分子置換 / 結合親和力 / DNA結合蛋白質 / 計算機実験 / parallelization / parallel computer / amino acid substitution / prediction / thermal stability / 並列化 / スーパーコンピュータ / 変性構造 / 立体構造 / 変異体蛋白質 / 超好熱菌 / サブユニット / 四次構造変化 / ヘモグロビン / 生体生命情報学 / 回転拡散係数 / 構造変化 / パッキング / ラクトアルブミン / フォールディング / 拡散係数 / 内部空洞 / シャペロニン / 反応場 / 分子シミュレーション / 化学物理 / ハイパフォーマンスコンピューティング / 自由エネルギー摂動法 / タンパク質 … More Except Principal Investigator 水和水 / 水素原子 / NMR / 動力学計算 / 熱化学実験 / 安定誘導体の合成 / 多糖 / 酵素反応遷移状態配座 / エンド型グリコシダーゼ / 化学合成 / 遷移状態アナログ / 硫黄置換誘導体 / 基質アナログ / エンドポリガラクツロナーゼ / セルラーゼ / エンドグリコシダーゼ / 複合体形成 / 基質ミミック / 反応機構 / endo型グリコシダーゼ / 創薬標的タンパク質 / 結晶構造 / 中性子解析 / タンパク質 / 創薬標的分子 / 薬物設計 / シミュレーション / 脱水和 / 熱測定 / 中性子回折 Less

A free energy calculation study on the thermal stability and denatured state structure of RNaseHIIPrincipal Investigator
- Principal Investigator
  
  MINORU Saito
- Project Period (FY)
  2011 – 2013
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Hirosaki University
Large scale MD simulation studies on quaternary structural changes of hemoglobinPrincipal Investigator
- Principal Investigator
  
  SAITO Minoru
- Project Period (FY)
  2008 – 2010
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Hirosaki University
Technological improvement for Neutron Crystallographic Analysis of Protein Structures
- Principal Investigator
  
  KUROKI Ryota
- Project Period (FY)
  2007 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Structural biochemistry
- Research Institution
  Japan Atomic Energy Agency
A reaction mechanism elucidation study based on many sugar-endo Type glycosidase complex analysi
- Principal Investigator
  
  HASHIMOTO Masaru
- Project Period (FY)
  2007 – 2008
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Bioproduction chemistry/Bioorganic chemistry
- Research Institution
  Hirosaki University
制限空間内水溶液の特殊な物理化学的性質が蛋白質の折れ畳に及ぼす影響Principal Investigator
- Principal Investigator
  
  斎藤稔
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Science and Engineering
- Research Institution
  Hirosaki University
生体高分子の機能発現における水素・水和水の静的・動的な役割の実証
- Principal Investigator
  
  KUROKI Ryota
- Project Period (FY)
  2005
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Living organism molecular science
- Research Institution
  Japan Atomic Energy Agency
Development of more accurate molecular dynamics simulation method by combining ab initio all electron calculation method for proteinsPrincipal Investigator
- Principal Investigator
  
  SAITO Minoru
- Project Period (FY)
  2005 – 2006
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  Hirosaki University
熱安定性計算に基づいた蛋白質の変性状態の構造予測Principal Investigator
- Principal Investigator
  
  齋藤稔
- Project Period (FY)
  2003
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Hirosaki University
熱安定性計算に基づいた蛋白質の変性状態の構造予測Principal Investigator
- Principal Investigator
  
  齋藤稔
- Project Period (FY)
  2002
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Hirosaki University
Prediction and control of base sequence recognition ability for nucleic acid binding proteins by using computer experiments.Principal Investigator
- Principal Investigator
  
  SAITO Minoru
- Project Period (FY)
  2002 – 2003
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  ポストゲノムのナノサイエンス
- Research Institution
  Hirosaki University
アミノ酸置換による蛋白質中の化学反応場の制御Principal Investigator
- Principal Investigator
  
  斉藤稔 (斎藤稔)
- Project Period (FY)
  2000 – 2001
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Review Section
  
  Science and Engineering
- Research Institution
  Hirosaki University
Prediction and control of protein stability using computer experimentsPrincipal Investigator
- Principal Investigator
  
  SAITO Minoru
- Project Period (FY)
  2000 – 2001
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Biophysics
- Research Institution
  Hirosaki University
アミノ酸置換による蛋白質中の化学反応場の制御Principal Investigator
- Principal Investigator
  
  斎藤稔
- Project Period (FY)
  1999
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Review Section
  
  Science and Engineering
- Research Institution
  Hirosaki University

All 2013 2010 2009 2008 2007 2005

All Journal Article Presentation Book

[Book] シミュレーション2013
- Author(s)
  佐藤文明、斎藤稔、石原進、渡辺尚
- Total Pages
  243
- Publisher
  共立出版
- Data Source
  KAKENHI-PROJECT-23500366
[Journal Article] Force-Field Parameters of the C and F Around Glycosidic Bonds to Oxveen and Sulfur Atoms2009
- Author(s)
  Minoru Saito, Isao Okazaki
- Journal Title
  
  J. Comput. Chem 30(Articles online in advance of print)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19380064
[Journal Article] Force-field parameters of the Ψ and Φ aroud glycosidic bonds to oxygen and sulfur atoms2009
- Author(s)
  Minoru Saito, Isao Okazaki
- Journal Title
  
  J.Comput.Chem. 30
  
  Pages: 2656-2665
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20500268
[Journal Article] Force- Field Parameters of the C and F Around Glycosidic Bonds to Oxygen and Sulfur Atoms2009
- Author(s)
  Minoru Saito, Isao Okazaki
- Journal Title
  
  J. Comput. Chem (in press)
- Data Source
  KAKENHI-PROJECT-19380064
[Journal Article] Large Scale MD Simulations of Proteins on the Earth Simulator : Quaternary Structural Changes of Hemoglobin2009
- Author(s)
  Minoru Saito
- Journal Title
  
  Annual Report of the Earth Simulator Cent er, April 2008-March 2009 (印刷中)
- Data Source
  KAKENHI-PROJECT-20500268
[Journal Article] Large Scale MD Simulations of Proteins on the Earth Simulator : Quaternary Structural Changes of Hemoglobin2008
- Author(s)
  Minoru Saito
- Journal Title
  
  Annual Report of the Earth Simulator Center
  
  Pages: 261-265
- Data Source
  KAKENHI-PROJECT-20500268
[Journal Article] A 45-ns molecular dynamics simulation of hemoglobin in water by vectorizing and parallelizing COSMOS90 on the Earth Simulator : dynamics of tertiary and quaternary structures2007
- Author(s)
  M.Saito, I.Okazaki
- Journal Title
  
  J.Comput.Chem. 28
  
  Pages: 1129-1136
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-17510156
[Journal Article] A 45-ns molecular dynamics simulation of hemoglobin in water by vectorizing and parallelizing COSMOS90 on the Earth Simulator : dynamics of tertiary and quaternary structures2007
- Author(s)
  M.Saito, I.Okazaki
- Journal Title
  
  J. Comput. Chem. 28
  
  Pages: 1129-1136
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-17510156
[Journal Article] ns molecular dynamics simulation of hemoglobin in water by vectorizing and parallelizing COSMOS90 on the Earth Simulator : dynamics of tertiary and quaternary structures2007
- Author(s)
  M.Saito, I.Okazaki A 45
- Journal Title
  
  J.Comput.Chem. 28
  
  Pages: 1129-1136
- Data Source
  KAKENHI-PROJECT-18031003
[Journal Article] 地球シミコ-レータによる蛋白質の大規模シミュレーション : ベクトル化と並列化による加速性能2005
- Author(s)
  斎藤稔
- Journal Title
  
  情報処理学会論文誌 46, No. SIG7 (ACS10)
  
  Pages: 9-17
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-17510156
[Journal Article] Large Scale Simulations of Proteins on the Earth Simulator : Acceleration Performance by Vectorization and Parallelization2005
- Author(s)
  M.Saito
- Journal Title
  
  IPSJ Transactions on Advanced Computing Systems 10
  
  Pages: 9-17
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-17510156
[Journal Article] 地球シミュレータによる蛋白質の大規模シミュレーション:ベクトル化と並列化による加速性能2005
- Author(s)
  斎藤稔
- Journal Title
  
  情報処理学会論文誌 46,No.SIG7(ACS10)
  
  Pages: 9-17
- NAID
  110002768762
- Data Source
  KAKENHI-PROJECT-17510156
[Presentation] MD simulations of hemoglobin in water with all degrees of freedom for different oxygen binding states and quaternary structures2010
- Author(s)
  Minoru Saito
- Organizer
  The 48th Annual Meeting of the Biophysical Society of Japan
- Place of Presentation
  Tohoku University (Sendai, Japan)
- Year and Date
  2010-09-20
- Data Source
  KAKENHI-PROJECT-20500268
[Presentation] MD simulations of hemoglobin in water with all degrees of freedom for different oxygen binding states and quaternary structures2010
- Author(s)
  Minoru Saito
- Organizer
  The 48^<th> Annual Meeting of the Biophysical Society of Japan
- Place of Presentation
  Tohoku University (Sendai, Japan)
- Year and Date
  2010-09-20
- Data Source
  KAKENHI-PROJECT-20500268
[Presentation] endo-PG反応機構解明を目指した二環性遷移状態基質アナログの合成研究2008
- Author(s)
  山本和範、工藤慎士、斎藤稔、橋本勝
- Organizer
  日本農芸化学会東北支部143大会
- Place of Presentation
  弘前
- Year and Date
  2008-10-11
- Data Source
  KAKENHI-PROJECT-19380064
[Presentation] 水中のヘモグロビンの四次構造変化のシミュレーション2008
- Author(s)
  斎藤稔
- Organizer
  第46回日本生物物理学会年会
- Place of Presentation
  東京
- Year and Date
  2008-06-12
- Data Source
  KAKENHI-PROJECT-20500268
[Presentation] 水中のシャペロニンの全自由度分子動力学シミュレーション2007
- Author(s)
  斎藤稔, 岡崎功
- Organizer
  日本蛋白質科学会
- Place of Presentation
  仙台国際センター
- Year and Date
  2007-05-24
- Data Source
  KAKENHI-PROJECT-18031003

1. OKAZAKI Isao (60332491)

# of Collaborated Projects: 5 results

# of Collaborated Products: 5 results
2. KIDOKORO Shun-ichi (80195320)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
3. KUROKI Ryota (30391246)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
4. TAMADA Taro (50391248)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
5. ADACHI Motoyasu (60293958)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. UMINO Hisao (20399421)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. OHHARA Takashi (60391249)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. OKAZAKI Nobuo (60391900)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. KURIHARA Kazuo (50354890)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. HASHIMOTO Masaru (40212138)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
11. MIYAIRI Kazuo (10003526)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. SHIMIZU Hiroki (30344716)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. SHIMIZU Tetsuya (80435651)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. NAGAI Masako (60019578)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 森元聡 (60191045)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 米本照代 (30265714)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

SAITO Minoru 斎藤 稔

斉藤 稔 サイトウ ミノル

斎藤 稔 サイトウ ミノル

Research Projects

Research Products

Co-Researchers

A free energy calculation study on the thermal stability and denatured state structure of RNaseHIIPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Large scale MD simulation studies on quaternary structural changes of hemoglobinPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Technological improvement for Neutron Crystallographic Analysis of Protein Structures

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

A reaction mechanism elucidation study based on many sugar-endo Type glycosidase complex analysi

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

制限空間内水溶液の特殊な物理化学的性質が蛋白質の折れ畳に及ぼす影響Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

生体高分子の機能発現における水素・水和水の静的・動的な役割の実証

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Development of more accurate molecular dynamics simulation method by combining ab initio all electron calculation method for proteinsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

熱安定性計算に基づいた蛋白質の変性状態の構造予測Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

熱安定性計算に基づいた蛋白質の変性状態の構造予測Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Prediction and control of base sequence recognition ability for nucleic acid binding proteins by using computer experiments.Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

アミノ酸置換による蛋白質中の化学反応場の制御Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Prediction and control of protein stability using computer experimentsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

アミノ酸置換による蛋白質中の化学反応場の制御Principal Investigator

Principal Investigator

SAITO Minoru 斎藤稔

斉藤稔サイトウミノル

斎藤稔サイトウミノル