Tohsato Yukako 遠里由佳子

… Alternative Names

TOHSATO Yukari 遠里由香理

TOHSATO Yukako 遠里由佳子

遠里由佳子トオサトユカコ

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Researcher Number	80346171
Other IDs
Affiliation (Current)	2025: 立命館大学, 情報理工学部, 教授
Affiliation (based on the past Project Information) *help	2019 – 2024: 立命館大学, 情報理工学部, 教授 2017 – 2018: 大阪電気通信大学, 情報通信工学部, 准教授 2016: 国立研究開発法人理化学研究所, 生命システム研究センター, 研究員 2015: 理化学研究所, 生命システム研究センター, 研究員 2013 – 2014: 独立行政法人理化学研究所, その他部局等, 研究員 … More 2013: 独立行政法人理化学研究所, 生命システム研究センター, 研究員 2011 – 2012: 立命館大学, 生命科学部, 助教 2005 – 2007: 立命館大学, 情報理工学部, 講師 Less
Review Section/Research Field	Principal Investigator Bioinformatics/Life informatics / Basic Section 62010:Life, health and medical informatics-related / Life / Health / Medical informatics Except Principal Investigator Medium-sized Section 44:Biology at cellular to organismal levels, and related fields / Basic Section 61030:Intelligent informatics-related / Basic Section 10040:Experimental psychology-related / System genome science
Keywords	Principal Investigator バイオインフォマティクス / 時系列データ / システム生物学 / データ駆動型解析 / C. elegans / 表現型解析 / 時系列データ解析 / 数理モデル / データマイニング / 統計的因果推論 … More / 顕微鏡画像データ / 物体検出 / バイオイメージインフォマティクス / 因果推論 / 解析・評価 / 画像 / アルゴリズム / 統計数学 / 発生・分化 / データ駆動解析 / 確率的生成モデル / ベイズ推定 / 隠れマルコフモデル / 2D-DIGE / Phenotype MicroArray / 線虫 / 大腸菌 / オミックスデータ解析 / 頑強性 / 国際情報交流 / 代謝 / 感度解析 / 統計解析 / 表現型 / マイクロアレイ / 類似構造検索 / ネットワーク比較 / 代謝ネットワーク / 分子系統樹最短経路間題 / MACCS key / グラフ比較 / アライメント / 類似構造比較 / Tanimoto係数 / データベース / 代謝反応パスウェイ … More Except Principal Investigator 行動表現型 / 神経 / マウス / 脳機能 / 因果推論 / 情報処理 / 大規模データ / 誕生日タグづけ / 生育結合 / 流束均衡解析 / 増殖連動型生産 / 線形計画問題 / 遺伝子削除問題 / 反応削除問題 / 制約モデル / ゲノムスケールモデル / 遺伝子削除 / 微生物 / GPRルール / 遺伝子削除戦略 / 代謝ネットワーク設計 / ゲノムスケール代謝モデル / 混合整数線形計画法 / アルゴリズム / 増殖連動生産 / 有用物質生産 / 代謝ネットワーク / 実験計画法 / 心理物理関数 / 顔認知 / 心理物理学 / ベイズ最適化 / 顔知覚 / 効用関数 / ガウス過程回帰 / ガウス過程選好学習 / 細胞内ネットワーク / 遺伝的ネットワーク / 二重欠失株 / Chemical Genomics / Multiplex解析 / population変動 / 貞コピー可動型発現プラスミド / deep sequence / 一遺伝子欠失株 / 分子バーコード / 大腸菌 / ケミカルバイオロジー / 長期定常期 / 大腸菌population変動解析 / バーコード解析 / deep sequencing / stationary phase / chemical genomics / population dynamics / deletion collection / bar-code / E. coli Less

Inference between neuron subsets and their resulting physiological phenotypes using the data obtained by neurogenic tagging
- Principal Investigator
  
  Hirata Tatsumi
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 44:Biology at cellular to organismal levels, and related fields
- Research Institution
  National Institute of Genetics
Algorithms for metabolic network design for efficient production of valuable substances
- Principal Investigator
  
  田村武幸
- Project Period (FY)
  2020 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 61030:Intelligent informatics-related
- Research Institution
  Kyoto University
Bayesian Optimization for Estimation of Unknown Multidimensional Psychophysical Functions
- Principal Investigator
  
  Komori Masashi
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 10040:Experimental psychology-related
- Research Institution
  Osaka Electro-Communication University
Development of Computational Methods for Mining Causal Relationships Based on Microscopic ImagesPrincipal Investigator
- Principal Investigator
  
  Tohsato Yukako
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  Ritsumeikan University
Development of stochastic models to represent cellular states and their application to analysis of nuclear division dynamicsPrincipal Investigator
- Principal Investigator
  
  Tohsato Yukako
- Project Period (FY)
  2016 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Ritsumeikan University
  Osaka Electro-Communication University
  Institute of Physical and Chemical Research
Strategy of a cell to survive during a long term stationary phase before cell proliferation.
- Principal Investigator
  
  Mori Hirotada
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  System genome science
- Research Institution
  Nara Institute of Science and Technology
Analysis of robustness of metabolic networks focusing on environmental dependency of gene knockoutsPrincipal Investigator
- Principal Investigator
  
  TOHSATO Yukako
- Project Period (FY)
  2011 – 2013
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Institute of Physical and Chemical Research
  Ritsumeikan University
異種生物間の代謝ネットワークの構造比較に関する研究Principal Investigator
- Principal Investigator
  
  遠里由佳子
- Project Period (FY)
  2005 – 2007
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Ritsumeikan University

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All Journal Article Presentation Book

[Book] 特集号生物学のデータと可視化生命現象の時空間動態情報の可視化2020
- Author(s)
  京田耕司，ホーケネス，糸賀裕弥, 遠里由佳子，大浪修一
- Total Pages
  4
- Publisher
  可視化情報学会誌
- ISBN
- Data Source
  KAKENHI-PROJECT-16K00414
[Book] 生命現象の時空間動態情報の可視化2020
- Author(s)
  京田耕司，ホーケネス，糸賀裕弥, 遠里由佳子，大浪修一
- Total Pages
  4
- Publisher
  可視化情報学会論文誌特集号生物学のデータと可視化
- ISBN
- Data Source
  KAKENHI-PROJECT-19K12226
[Book] Protein Function Prediction for Omics Era: 15. Towards elucidation of the Escherichia coli K-12 unknowneome2011
- Author(s)
  Yukako Tohsato, Natsuko Yamamoto, Toru Nakayshiki, Rikiya Takeuchi, Barry L. Wanner, Hirotada Mori, Daisuke Kihara (Ed.)
- Publisher
  Springer
- Data Source
  KAKENHI-PROJECT-23700353
[Book] Springer2011
- Author(s)
  Y. Tohsato, et al.
- Publisher
  Towards elucidation of the E. coli unknowneome
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] Segmentation of Mouse Brain Slices with Unsupervised Domain Adaptation Considering Cross-sectional Locations2024
- Author(s)
  Shimojo Yuki、Suehara Kazuki、Hirata Tatsumi、Tohsato Yukako
- Journal Title
  
  IPSJ Transactions on Bioinformatics
  
  Volume: 17 Issue: 0 Pages: 33-39
- DOI
  10.2197/ipsjtbio.17.33
- ISSN
  1882-6679
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K19281, KAKENHI-PROJECT-20H03345
[Journal Article] Large-scale Image Processing and Three-Dimensional Reconstruction of Mouse Brains with Neurogenic-Tagged Neurons2023
- Author(s)
  Kawabata Hiroto、Shimojo Yuki、Hirata Tatsumi、Tohsato Yukako
- Journal Title
  
  Proceedings of the 13th International Conference on Biomedical Engineering and Technology
  
  Volume: ー Pages: 1-7
- DOI
  10.1145/3620679.3620680
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K19281, KAKENHI-PROJECT-20H03345
[Journal Article] Gene Deletion Algorithms for Minimum Reaction Network Design by Mixed-Integer Linear Programming for Metabolite Production in Constraint-Based Models: gDel_minRN2023
- Author(s)
  Tamura Takeyuki、Muto-fujita Ai、Tohsato Yukako、Kosaka Tomoyuki
- Journal Title
  
  Journal of Computational Biology
  
  Volume: 30 Issue: 5 Pages: 553-568
- DOI
  10.1089/cmb.2022.0352
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23K20386
[Journal Article] Metabolic Network Analysis by Time-series Causal Inference Using the Multi-dimensional Space of Prediction Errors2023
- Author(s)
  Ohyama Takashi、Tohsato Yukako
- Journal Title
  
  IPSJ Transactions on Bioinformatics
  
  Volume: 16 Issue: 0 Pages: 13-19
- DOI
  10.2197/ipsjtbio.16.13
- ISSN
  1882-6679
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K20386
[Journal Article] NeuroGT: A brain atlas of neurogenic tagging CreER drivers for birthdate-based classification and manipulation of mouse neurons2021
- Author(s)
  Hirata Tatsumi、Tohsato Yukako、Itoga Hiroya、Shioi Go、Kiyonari Hiroshi、Oka Sanae、Fujimori Toshihiko、Onami Shuichi
- Journal Title
  
  Cell Reports Methods
  
  Volume: 1 Issue: 3 Pages: 100012-100012
- DOI
  10.1016/j.crmeth.2021.100012
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-18H05412, KAKENHI-PROJECT-20H03345, KAKENHI-PROJECT-16H06280, KAKENHI-PROJECT-21K19281
[Journal Article] BD5: An open HDF5-based data format to represent quantitative biological dynamics data2020
- Author(s)
  Koji Kyoda, Kenneth H. L. Ho, Yukako Tohsato, Hiroya Itoga, Shuichi Onami
- Journal Title
  
  PLOS ONE
  
  Volume: 15 Issue: 8 Pages: e0237468-e0237468
- DOI
  10.1371/journal.pone.0237468
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K12226, KAKENHI-PLANNED-18H05412
[Journal Article] Parameter optimization and sensitivity analysis forlarge kinetic models using a real-coded genetic algorithm2013
- Author(s)
  Y.Tohsato, K.Ikuta, A.Shionoya, Y.Mazaki, M .I t o
- Journal Title
  
  Genes
  
  Volume: 518 Issue: 1 Pages: 84-90
- DOI
  10.1016/j.gene.2012.11.080
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22500276, KAKENHI-PROJECT-23700353
[Journal Article] ECOH: An Enzyme Commission number predictor using mutual information and a support vector machine2013
- Author(s)
  Y.Matsuta, M. I to , Y. Tohsato
- Journal Title
  
  Bioinformatics
  
  Volume: 29 Issue: 3 Pages: 365-372
- DOI
  10.1093/bioinformatics/bts700
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22500276, KAKENHI-PROJECT-23700353
[Journal Article] 無限関係モデルを用いた大腸菌の表現型マイクロアレイ解析2013
- Author(s)
  杉澤仁，福田一，森浩禎，谷口忠大，伊藤將弘，遠里由佳子
- Journal Title
  
  立命館大学理工学研究所紀要
  
  Volume: 71 Pages: 49-58
- NAID
  110009595156
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] Biochemical studies on sphingolipids of Artemia franciscana:complex neutral glycosphingolipids2013
- Author(s)
  H.Kojima, Y.Tohsato, K.Kobayama, S.Itonori, M.Ito
- Journal Title
  
  Glycoconjugate Journal
  
  Volume: 30 Issue: 3 Pages: 257-268
- DOI
  10.1007/s10719-012-9436-8
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22500276, KAKENHI-PROJECT-23700353
[Journal Article] 相互情報量とSVMを用いた酵素反応におけるEC番号の推定法の開発2012
- Author(s)
  松田祥彦, 伊藤將弘, 遠里由佳子
- Journal Title
  
  立命館大学理工学研究所紀要
  
  Volume: 70 Pages: 21-28
- NAID
  110009461549
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] Intrinsically disordered proteins in Human mitochondria2012
- Author(s)
  M.Ito, Y.Tohsato, H.Sugisawa, S.Kohara, S.Fukuchi, I.Nishikawa, K. Nishikawa
- Journal Title
  
  Genes to Cells
  
  Volume: 17 Issue: 10 Pages: 817-825
- DOI
  10.1111/gtc.12000
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22500276, KAKENHI-PROJECT-23500372, KAKENHI-PROJECT-23700353, KAKENHI-PLANNED-21113007
[Journal Article] 無限関係モデルを用いた大腸菌の表現型マイクロアレイ解析2012
- Author(s)
  杉澤仁,福田一,森浩禎,谷口忠大,伊藤將弘,遠里由佳子
- Volume
  Vol.71
- Pages
  49-58
- NAID
  110009595156
- URL
  http://ci.nii.ac.jp/naid/110009595156
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] 線虫Caenorhabditis elegansの発生ステージにおける定量プロテオーム解析2012
- Author(s)
  物部香奈美, 遠里由佳子, 早野俊哉, 伊藤將弘
- Journal Title
  
  立命館大学理工学研究所紀要
  
  Volume: 70 Pages: 13-20
- NAID
  110009461548
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] Comparative proteomic analysis reveals differentially expressed proteins in Caenorhabditis eleganspgl-1 mutants grown at 20°C and 25°C2012
- Author(s)
  Y.Tohsato, K.Monobe, K. Suzuki, T.Hayano, I.Kawasaki, M .I t o
- Journal Title
  
  Journal of Proteomics
  
  Volume: 75 Issue: 15 Pages: 4792-4801
- DOI
  10.1016/j.jprot.2012.04.038
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22500276, KAKENHI-PROJECT-23700353
[Journal Article] Comparative proteomic analysis reveals differentially expressed proteins igrown at 20°C and 25°Cn Caenorhabditis elegans pgl-1 mutants2012
- Author(s)
  Yukako Tohsato, Kanami Monobe, Kenji Suzuki, Toshiya Hayano
- Journal Title
  
  Journal of Proteomics
  
  Volume: 印刷中（掲載確定）
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] 相互情報量とSVMを用いた酵素反応におけるEC番号の推定手法の開発2011
- Author(s)
  松田祥彦, 伊藤將弘, 遠里由佳子
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 7 Pages: 1-6
- NAID
  110008605711
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] 機械学習によるEP2受容体を標的とした化合物の探索手法の開発2011
- Author(s)
  小原祥平, 遠里由佳子, 伊藤將弘
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 8 Pages: 1-2
- NAID
  110008605712
- Data Source
  KAKENHI-PROJECT-23700353
[Journal Article] 反応プロファイルに基づく異種生物種間の代謝ネットワークの比較2007
- Author(s)
  遠里由佳子, 西村悠
- Journal Title
  
  情報処理学会研究報告バイオ情報学 2007-BIO-05
  
  Pages: 97-101
- NAID
  110004823191
- Data Source
  KAKENHI-PROJECT-17700297
[Journal Article] Metabolic pathway alignment based on similarity between chemical structures2007
- Author(s)
  Yukako Tohsato, Yu Nishimura
- Journal Title
  
  IPSJ Transactions on Bioinformatics Vol.48
  
  Pages: 9-18
- NAID
  110006249442
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17700297
[Journal Article] 代謝反応パスウェイのアラインメントにおけるZ値を用いたスコア補正法2007
- Author(s)
  西村悠, 遠里由佳子
- Journal Title
  
  情報処理学会研究報告バイオ情報学 2007-BIO-08
  
  Pages: 33-40
- NAID
  110006595428
- Data Source
  KAKENHI-PROJECT-17700297
[Journal Article] A method for Species Comparison of Metabolic Networks using ReactionProfile2006
- Author(s)
  Yukako Tohsato
- Journal Title
  
  IPSJ Transactions on Bioinformatics(情報処理学会論文誌「バイオ情報学」) Vol. 47,No.SIG17
  
  Pages: 42-47
- NAID
  110004823191
- Data Source
  KAKENHI-PROJECT-17700297
[Journal Article] An OGSA-based integration of life scientific resources for drug discovery2005
- Author(s)
  Takahiro Kosaka, Yukako Tohsato, Susumu Date, Hideo Matsuda, Shinji Shimojo
- Journal Title
  
  Methods of Information in Medicine 44・2
  
  Pages: 480-489
- Data Source
  KAKENHI-PROJECT-17700297
[Journal Article] Biological Receptor for the External Synchronization of Mutually Coupled Oscillator Systems
- Author(s)
  Seido Nagano, Atsushi Yokoyama, Yukako Tohsato, Takuya Takahashi
- Journal Title
  
  (投稿中)
- Data Source
  KAKENHI-PROJECT-17700297
[Presentation] 高解像度なマウス脳画像の領域検出にむけた画像の前後処理法の提案2022
- Author(s)
  下條優季　　平田たつみ　　遠里由佳子
- Organizer
  第25回画像の認識・理解シンポジウム
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] NeuroGTのマウス全脳画像の三次元再構築2022
- Author(s)
  川端宏知、下條優貴、平田たつみ、遠里由佳子
- Organizer
  第11回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] 深層学習による高解像度なマウス脳切片画像の領域検出に向けた画像処理法の提案2022
- Author(s)
  下條優季、平田たつみ、遠里由佳子
- Organizer
  第11回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] 大規模なマウスの脳切片画像の画像処理と三次元再構築2022
- Author(s)
  川端宏知　下條優貴　平田たつみ　遠里由佳子
- Organizer
  第25回画像の認識・理解シンポジウム
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] 非線形な時系列に対するガウス過程回帰を用いた因果推論2021
- Author(s)
  大山鷹志、遠里由佳子
- Organizer
  第10回生命医薬情報連合大会(IIBMP2021)
- Data Source
  KAKENHI-PROJECT-19K12226
[Presentation] NeuroGT: A brain atlas of neurogenic tagging CreER drivers for birthdate-based classification and manipulation of mouse neurons2021
- Author(s)
  Tatsumi Hirata, Yukako Tohsato, Hiroya Itoga, Go Shioi, Hiroshi Kiyonari, Sanae Oka, Toshihiko Fujimori and Shuichi Onami
- Organizer
  第54回日本発生学会
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] Gene deletion algorithms for minimum reaction network design by mixed-integer linear programming for metabolite production in constraint-based models: gDel_minRN2021
- Author(s)
  Takeyuki Tamura, Ai Muto-Fujita, Yukako Tohsato and Tomoyuki Kosaka
- Organizer
  第10回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-23K20386
[Presentation] NeuroGT：神経細胞の誕生日タグづけ用CreERドライバーマウスの脳アトラス2021
- Author(s)
  平田たつみ、遠里由佳子、糸賀裕弥、塩井剛、清成寛、岡早苗、藤森俊彦、大浪修一
- Organizer
  第４４回日本分子生物学会、ワークショップ
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] 領域検出における時系列を用いたドメイン適用適応と細胞画像への応用2021
- Author(s)
  野崎弘晃, 遠里由佳子
- Organizer
  第24回画像の認識・理解シンポジウム(MIRU2021)
- Data Source
  KAKENHI-PROJECT-19K12226
[Presentation] NeuroGT：神経細胞の誕生日タグづけ用CreERドライバーマウスの脳アトラス2021
- Author(s)
  Tatsumi Hirata, Yukako Tohsato, Hiroya Itoga, Go Shioi, Hiroshi Kiyonari, Sanae Oka, Toshihiko Fujimori and Shuichi Onami
- Organizer
  第44回日本神経科学大会
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] Launching NeuroGT: a brain atlas of neurogenic tagging CreER drivers for birthdate-based classification and manipulation of mouse neurons2021
- Author(s)
  Tatsumi Hirata, Yukako Tohsato, Hiroya Itoga, Go Shioi, Hiroshi Kiyonari, Sanae Oka, Toshihiko Fujimori and Shuichi Onami
- Organizer
  北米神経科学学会2021
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K19281
[Presentation] 確率的生成モデルを用いた線虫初期発生の分節化2020
- Author(s)
  中谷圭志, 遠里由佳子
- Organizer
  生命医薬情報連合大会
- Data Source
  KAKENHI-PROJECT-19K12226
[Presentation] 線虫の細胞核の時系列データの HDP-HSMM を用いた分節化2020
- Author(s)
  中谷圭志, 遠里由佳子
- Organizer
  情報処理学会研究報告
- Data Source
  KAKENHI-PROJECT-19K12226
[Presentation] 撮影条件の異なる細胞画像の領域検出におけるデータ拡張の有効性2020
- Author(s)
  野崎弘晃, 遠里由佳子
- Organizer
  生命医薬情報連合大会
- Data Source
  KAKENHI-PROJECT-19K12226
[Presentation] Data-driven analysis of female pronuclear migration by image-processing embryonic movies in Phenobank2019
- Author(s)
  Y. Tohsato, H. Okada, K. Kyoda, S, Onami
- Organizer
  22nd International C. elegans Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K00414
[Presentation] 公共データベースの顕微鏡画像を用いた細胞核分裂の定量計測と表現型解析2018
- Author(s)
  遠里由佳子, 岡田初美, 京田耕司, 大浪修一
- Organizer
  生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-16K00414
[Presentation] Large-Scale Kinetic Modeling for the Central Metabolism in Escherichia coli Grown on Glucose or Glycerol2013
- Author(s)
  Akitaka Shionoya, Kunihiko Ikuta, Shuichi Onami, Masahiro Ito, Yukako Tohsato
- Organizer
  Genome Informatics
- Place of Presentation
  Biopolis, Singapore
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Large-Scale Kinetic Modeling for the Central Metabolism in Escherichia coli Grown on Glucose or Glycerol2013
- Author(s)
  Akitaka Shionoya, Kunihiko Ikuta, Shuichi Onami, Masahiro Ito, Yukako Tohsato
- Organizer
  Genome Informatics
- Place of Presentation
  Singapore, Biopolis
- Year and Date
  2013-12-16
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Modeling of central metabolism with regulation of rpoS gene in Escherichia coli2012
- Author(s)
  Akitaka Shionoya, Kunihiko Ikuta, Hitomi Dose, Hirotada Mori, Masahiro Ito, Yukako Tohsato
- Organizer
  Genome Informatics
- Place of Presentation
  China, Hangzhou
- Year and Date
  2012-12-12
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] 代謝ネットワークの頑強性に着目した数理解析2012
- Author(s)
  遠里由佳子
- Organizer
  電子情報通信学会2012年総合大会(招待講演)
- Place of Presentation
  岡山大学（岡山県）
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] 遺伝子の環境依存性に着目したPhenotype MicroArray 解析2012
- Author(s)
  遠里由佳子
- Organizer
  第3回BKCバイオインフォマティクス研究会(招待講演)
- Place of Presentation
  立命館大学（滋賀県）
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Parameter optimization and correlation analysis for a large kinetic model using a real-coded genetic algorithm2012
- Author(s)
  Kunihiko Ikuta, Akitaka Shionoya, Masahiro Ito, Yukako Tohsato
- Organizer
  Genome Informatics
- Place of Presentation
  China, Hangzhou
- Year and Date
  2012-12-12
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Phenotype microarray analysis of Escherichia coli using infinite relational model2012
- Author(s)
  Hitoshi Sugisawa, Hajime Fukuda, Hirotada Mori, Masahiro Ito, Tadahiro Taniguchi, Yukako Tohsato
- Organizer
  Genome Informatics
- Place of Presentation
  China, Hangzhou
- Year and Date
  2012-12-12
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Quantitative Proteomic Analysis of C. briggsae2011
- Author(s)
  A. Terasawa, Y. Tohsato, et al.
- Organizer
  18th International C. elegans Meeting
- Place of Presentation
  America/University of California (Los Angeles)
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Quantitative Proteomic Analysis in C. elegans2011
- Author(s)
  K. Monobe, Y. Ishido, Y. Tohsato, et al.
- Organizer
  18th International C. elegans Meeting
- Place of Presentation
  America/University of California (Los Angeles)
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Proteomic Analysis of C. elegans Mutants2011
- Author(s)
  Y. Tohsato, et al.
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜（神奈川都）
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] An Alignment Method Based on Compound Similarity to Analysis of Metabolic Pathway Duplications2007
- Author(s)
  Yukako Tohsato, Yu Nishimura
- Organizer
  Genome informatics 2007 Poster Book
- Place of Presentation
  Singapore
- Data Source
  KAKENHI-PROJECT-17700297
[Presentation] Comparison and evaluation of methods for generating phylophenetic trees by reaction profiles of metabolic networks2007
- Author(s)
  Yukako Tohsato
- Organizer
  Proceedings of the 6th Annual International Conference on Computational Systems Bioinformatics, Genome informatics 2007 Poster Book
- Place of Presentation
  California
- Data Source
  KAKENHI-PROJECT-17700297
[Presentation] 大腸菌のフェノーム情報に基づく代謝反応ネットワーク解析2007
- Author(s)
  遠里由佳子
- Organizer
  第17回システムバイオロジー研究会
- Place of Presentation
  奈良先端大学院大学
- Year and Date
  2007-11-27
- Data Source
  KAKENHI-PROJECT-17700297
[Presentation] Analysis of the phylogenetic profile of human glycosyltransferases
- Author(s)
  Takayoshi Tomono, Yukako Tohsato, Masahiro Ito
- Organizer
  The 23nd International Conference on　Genome Informatic
- Place of Presentation
  Tainan, Taiwan
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Quantitative analysis of mRNA expression profiles of ceramide-related genes using qRT-PCR
- Author(s)
  Haruka Yamaji, Kousuke Hori, Emiko Watase, Yukako Tohsato, Kenji Suzuki, Masahiro Ito
- Organizer
  5th East Asia C. elegans Meeting
- Place of Presentation
  Taipei, Taiwan
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Parameter optimization and correlation analysis for a large kinetic model using a real-coded genetic algorithm
- Author(s)
  Kunihiko Ikuta, Akitaka Shionoya, Masahiro Ito, Yukako Tohsato
- Organizer
  The 23nd International Conference on　Genome Informatic
- Place of Presentation
  Tainan, Taiwan
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Phenotype microarray analysis of Escherichia coli using infinite relational model
- Author(s)
  Hitoshi Sugisawa, Hajime Fukuda, Hirotada Mori, Masahiro Ito, Tadahiro Taniguchi, Yukako Tohsato
- Organizer
  The 23nd International Conference on　Genome Informatic
- Place of Presentation
  Tainan, Taiwan
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Modeling of central metabolism with regulation of rpoS gene in Escherichia coli
- Author(s)
  Akitaka Shionoya, Kunihiko Ikuta, Hitomi Dose, Hirotada Mori, Masahiro Ito, Yukako Tohsato
- Organizer
  The 23nd International Conference on　Genome Informatic
- Place of Presentation
  Tainan, Taiwan
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] 大腸菌における表現型マイクロアレイデータ解析と数理モデルの構築
- Author(s)
  遠里由佳子
- Organizer
  第4回次世代創薬プロジェクトワークショップ
- Place of Presentation
  立命館大学, 滋賀
- Data Source
  KAKENHI-PROJECT-23700353
[Presentation] Comparative proteomic analysis for Caenorhabditis elegans pgl-1 mutants grown at 20°C and 25°C using 2D-DIGE
- Author(s)
  Yukako Tohsato, Kanami Monobe, Kenji Suzuki, Toshiya Hayano, Ichiro Kawasaki, Masahiro Ito
- Organizer
  5th East Asia C. elegans Meeting
- Place of Presentation
  Taipei, Taiwan
- Data Source
  KAKENHI-PROJECT-23700353

1. TAMURA Takeyuki (00437261)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
2. KOSAKA Tomouki (70500453)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
3. Mori Hirotada (90182203)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. YAMADA Mamoru (30174741)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. MATSUNO Hiroshi (10181744)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. MAKI Yasushi (60401733)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. NAKAHIGASHI Kenji (70322740)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. SAITO Natsumi (50287546)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. Komori Masashi (60352019)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. Hirata Tatsumi (80260587)

# of Collaborated Projects: 1 results

# of Collaborated Products: 9 results
11. 片岡正和 (90332676)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 武藤愛 (80730506)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
13. ONAMI Shuichi

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
14. 伊藤將弘

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
15. 糸乗前

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Tohsato Yukako 遠里 由佳子

TOHSATO Yukari 遠里 由香理

TOHSATO Yukako 遠里 由佳子

遠里 由佳子 トオサト ユカコ

Research Projects

Research Products

Co-Researchers

Inference between neuron subsets and their resulting physiological phenotypes using the data obtained by neurogenic tagging

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Algorithms for metabolic network design for efficient production of valuable substances

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Bayesian Optimization for Estimation of Unknown Multidimensional Psychophysical Functions

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Development of Computational Methods for Mining Causal Relationships Based on Microscopic ImagesPrincipal Investigator

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Development of stochastic models to represent cellular states and their application to analysis of nuclear division dynamicsPrincipal Investigator

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Strategy of a cell to survive during a long term stationary phase before cell proliferation.

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Analysis of robustness of metabolic networks focusing on environmental dependency of gene knockoutsPrincipal Investigator

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異種生物間の代謝ネットワークの構造比較に関する研究Principal Investigator

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[Book] 特集号 生物学のデータと可視化 生命現象の時空間動態情報の可視化2020

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[Book] 生命現象の時空間動態情報の可視化2020

Author(s)

Total Pages

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[Book] Protein Function Prediction for Omics Era: 15. Towards elucidation of the Escherichia coli K-12 unknowneome2011

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[Book] Springer2011

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[Journal Article] Segmentation of Mouse Brain Slices with Unsupervised Domain Adaptation Considering Cross-sectional Locations2024

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Tohsato Yukako 遠里由佳子

TOHSATO Yukari 遠里由香理

TOHSATO Yukako 遠里由佳子

遠里由佳子トオサトユカコ

[Book] 特集号生物学のデータと可視化生命現象の時空間動態情報の可視化2020