KIKUCHI Jun 菊地淳

… Alternative Names

Researcher Number	00321753
Other IDs
Affiliation *help	2015 – 2018 : 国立研究開発法人理化学研究所, 環境資源科学研究センター, チームリーダー 2015 : 理化学研究所, 先端NMRメタボロミクスチーム, チームリーダー 2013 – 2014 : 独立行政法人理化学研究所, 環境資源科学研究センター, チームリーダー 2014 : 理化学研究所, 環境資源科学研究センター・統合メタボロミクス研究グループ・環境代謝分析研究チーム, チームリーダー 2012 : 独立行政法人理化学研究所, 先端NMR メタボミクスチーム, チームリーダー … More
Review Section/Research Field	Principal Investigator Living organism molecular science / オミクス計測科学 / Biophysics Except Principal Investigator Insect science / Plant molecular biology/Plant physiology / Wood science / Laboratory animal science / Aquatic bioproduction science / Boundary agriculture / Environmental agriculture(including landscape science) / Food Cycle Research / Applied entomology / Biodiversity/Systematics
Keywords	Principal Investigator 安定同位体標識 / 核磁気共鳴 / タンパク質 / NMR / 磁場配向 / ネットワーク解析 / 脂質分子組成 / メタボノミクス / 栄養代謝 / 核磁気共鳴法 … More Except Principal Investigator NMR / 微生物多様性 / 生態学 / 環境 / シロアリ / メタボローム / メタボローム解析 / 原生生物 / 分類学 / セルロース代謝 / 木質バイオマス / 共生 / 窒素 / 16S rRNA遺伝子 / 堆肥 / 窒素固定 / サツマイモ / イネ科植物 / 芳香核構造単純化 / MRI / シロイヌナズナ / 細菌 / 13C / 栄養共生 / 土壌微生物 / ミュータジェネシス / 物質循環 / 化学肥料 / 突然変異解析 / ゲノム機能 / マウス / 環境配列 / 核磁気共鳴法 / 微生物 / 水産学 / 有機質肥料 / 量的遺伝 / 光応答 / 昆虫生理生化学 / 消化系進化 / ENU / セルロース分解 / フクロタケ / 多様性 / 土壌養分 / 芳香族資源 / 水輸送 / 共生細菌 / 持続的農業 / 代謝 / プランクトン / 土壌有機物 / シイタケ / 進化 / 化学変異原 / バイオインフォーマティクス / プロティスト / 担子菌 / リグニン / 微生物生態 / ゴキブリ / 環境修復 / 有機化学 / 共生微生物 / 炭酸ガス固定 / キゴキブリ / 突然変異 / 突然変異体 / ゲノム解析 / 有機工業原材料 / 逆遺伝学 / DNAシーケンシング / 応用微生物 / 藻類 / 概日時計 / セルロース / 消化管 / 代謝工学 / フィトクロムA / 昆虫生理 / セルラーゼ / 輸送分子 / 還元分解 / アクアポリン / 細胞成長 / 海洋生態 / 根 / 微生物ループ / 疾患モデル動物 / 酵素反応 / 次世代シーケンシング / 糖 / 疾患モデル / 有機物 / 植物メタボローム / NMRイメージング / 遺伝学 / マウス遺伝学 Less

Study on the marine ecological role of labyrinthyulidsOngoing
- Principal Investigator
  
  本多大輔
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Aquatic bioproduction science
- Research Institution
  Konan University
有機物の長期連用が土壌微生物群集に及ぼす影響の分子生態学的解明Ongoing
- Principal Investigator
  
  池田成志
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Food Cycle Research
- Research Institution
  National Agriculture and Food Research Organization
Molecluar ecological analysis of nitrogen fixation mechanism in the symbiotic microbial community of sweet potatoOngoing
- Principal Investigator
  
  池田成志
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Environmental agriculture(including landscape science)
- Research Institution
  National Agriculture and Food Research Organization
Explorations of metabolic factors involved in efficient cellulolytic systems in insects
- Principal Investigator
  
  TOKUDA Gaku
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Insect science
- Research Institution
  University of the Ryukyus
Exploring biomarker identification evaluating ecosystem fructuation in natural samplesPrincipal Investigator
- Principal Investigator
  
  Kikuchi Jun
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  オミクス計測科学
- Research Institution
  Institute of Physical and Chemical Research
New approaches towards high-value added lignin production by the combination of metabolic engineering and organic chemistry
- Principal Investigator
  
  Toshiaki Umezawa
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Wood science
- Research Institution
  Kyoto University
The study of molecular mechanism of water transport in the roots of Arabidopsis thaliana: the challenge to MRI.
- Principal Investigator
  
  SATO-NARA Kumi
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Plant molecular biology/Plant physiology
- Research Institution
  Nara Women's University
Efficient cellulolytic systems viewed from metabolomics analyses
- Principal Investigator
  
  TOKUDA Gaku
- Project Period (FY)
  2010 – 2011
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Applied entomology
- Research Institution
  University of the Ryukyus
Novel molecular function of mushroom in carbon dioxide assimilation
- Principal Investigator
  
  MIZUNO Masashi
- Project Period (FY)
  2010 – 2011
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Boundary agriculture
- Research Institution
  Kobe University
High-throughput development of disease model mice by using next-generation technologies.
- Principal Investigator
  
  GONDO Yoichi
- Project Period (FY)
  2009 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Laboratory animal science
- Research Institution
  The Institute of Physical and Chemical Research
Basal construction studies for the diversity of algae-protist complexes
- Principal Investigator
  
  INOUYE Isao
- Project Period (FY)
  2009 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Biodiversity/Systematics
- Research Institution
  University of Tsukuba
物質循環計測を見据えた多次元NMRメタボノミクス法の開発Principal Investigator
- Principal Investigator
  
  菊地淳
- Project Period (FY)
  2005 – 2006
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Living organism molecular science
- Research Institution
  The Institute of Physical and Chemical Research
生体膜上で起こる相互作用解明のための脂質二重膜配向法の開発Principal Investigator
- Principal Investigator
  
  菊地淳
- Project Period (FY)
  2003 – 2004
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Living organism molecular science
- Research Institution
  The Institute of Physical and Chemical Research
膜貫通型タンパク質のNMR構造解析法の開発 -異方的構造情報の抽出-Principal Investigator
- Principal Investigator
  
  菊地淳
- Project Period (FY)
  2000 – 2001
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  Biophysics
- Research Institution
  The Institute of Physical and Chemical Research

All 2016 2015 2014 2013 2012 2011 2010 2009 2007 2006 2005 2004 Other

All Journal Article Presentation Book

[Book] ヒトマイクロビオーム研究の最前線2016
- Author(s)
  菊地淳
- Total Pages
  472
- Publisher
  エヌティーエス出版
- Data Source
  KAKENHI-PROJECT-25513012
[Book] セルロースナノファイバーの調製、分散・複合化と製品応用2015
- Author(s)
  菊地淳
- Total Pages
  535
- Publisher
  技術情報協会
- Data Source
  KAKENHI-PROJECT-25513012
[Book] セルロースナノファイバーの前処理、分散技術と応用事例2015
- Author(s)
  菊地　淳　（分筆）
- Total Pages
  244
- Publisher
  技術情報協会
- Data Source
  KAKENHI-PROJECT-25513012
[Book] 常在菌が操るヒトの健康と疾患2014
- Author(s)
  菊地　淳　（分筆）
- Total Pages
  834
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-25513012
[Book] 植物細胞壁2013
- Author(s)
  菊地　淳　（分筆）
- Total Pages
  349
- Publisher
  講談社
- Data Source
  KAKENHI-PROJECT-25513012
[Book] 難培養微生物研究の最新技術II2010
- Author(s)
  菊地淳、守屋繁春、福田真嗣、大野博司
- Total Pages
  287
- Publisher
  CMC出版
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] Polysaccharides as major carbon sources in environmental biodiversity2016
- Author(s)
  Kikuchi, J.* and Komatsu, T.
- Journal Title
  
  NMR in Glycoscience and Glycotechnology
  
  Volume : XX
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] SpinCouple: Development of web-tool for analyzing metabolite mixtures via 2D-J resolved NMR spectra2016
- Author(s)
  Kikuchi, J.* Tsuboi, Y., Komatsu, K., Gomi, M., Chikayama, E. and Date, Y.
- Journal Title
  
  Anal. Chem.
  
  Volume : 88 Pages : 659-665
- DOI
  10.1021/acs.analchem.5b02311
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Organosolv pretreatment of sorghum bagasse using a low concentration of hydrophobic solvents such as 1-butanol or 1-pentanol2016
- Author(s)
  Teramura, H., Kikuchi, J. (14人中13番目）
- Journal Title
  
  Biotech. Biofuels
  
  Volume : 9 Pages : 27-27
- DOI
  10.1186/s13068-016-0427-z
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] SENSI: Signal ENhancement by Spectral Integration for Analysis of Metabolic Mixtures2016
- Author(s)
  Misawa, T., Komatsu, T., Date, Y. and Kikuchi, J.*
- Journal Title
  
  Chem. Commun.
  
  Volume : 52 Pages : 2964-2967
- DOI
  10.1039/C5CC09442A
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Fragment Assembly Approach Based on Graph/Network Theory with Quantum Chemistry Verifications for Assigning Multidimensional NMR Signals in Metabolite Mixtures2016
- Author(s)
  Ito, K., Tsutsumi, Y., Date, Y. and Kikuchi, J.*
- Journal Title
  
  ACS Chem. Biol.
  
  Volume : 11 Pages : 1030-1038
- DOI
  10.1021/acschembio.5b00894
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Visualization of microfloral metabolism for marine waste recycling2016
- Author(s)
  Ogura, T., Hoshino, R., Date, Y. and Kikuchi, J.*
- Journal Title
  
  Metabolites
  
  Volume : 6 Pages : 7-7
- DOI
  10.3390/metabo6010007
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Application of Maket Basket Analysis for Visualization of Transaction Data based on Human Lifestyle and Spectroscopic Measurements2016
- Author(s)
  Shiokawa, Y., Misawa, T., Date, Y. and Kikuchi, J.*
- Journal Title
  
  Anal. Chem.
  
  Volume : 88 Pages : 2714-2719
- DOI
  10.1021/acs.analchem.5b04182
- Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Structure and metabolic flow analysis of molecular complexity in 13C-labeled tree by 2D and 3D-NMR2016
- Author(s)
  Komatsu, T., Ohishi, R., Shino, A. and Kikuchi, J.*
- Journal Title
  
  Angew. Chem. Int. Ed.
  
  Volume : XX
- DOI
  10.1002/anie.201600334
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] The effect of molecular conformation on the accuracy of theoretical 1H and 13C chemical shifts calculated by ab initio methods for NMR-based metabolomics databases2016
- Author(s)
  Chikayama, E., Shinbo, Y., Komatsu, K. and Kikuchi, J.*
- Journal Title
  
  J. Phys. Chem
  
  Volume : 120 Pages : 3479-3487
- DOI
  10.1021/acs.jpcb.5b12748
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Artificial Autopolyploidization Modifies the Tricarboxylic Acid Cycle and GABA Shunt in Arabidopsis thaliana Col-02016
- Author(s)
  Vergara, F. Kikuchi, J. Breuer, C.
- Journal Title
  
  Sci. Rep.
  
  Volume : XX
- Open Access / Acknowledgement Compliant / Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Profiling planktonic biomass using element-specific, multicomponent nuclear magnetic resonance spectroscopy2015
- Author(s)
  Komatsu, T., Kobayashi, T., Hatanaka, M. and Kikuchi, J.*
- Journal Title
  
  Environ. Sci. Technol
  
  Volume : 49 Pages : 7056-7062
- DOI
  10.1021/acs.est.5b00837
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Metabolic dynamics analysis by massive data integration: application to tsunami-affected field soils in Japan2015
- Author(s)
  Ogura, T., Date, Y., Tsuboi, Y. and Kikuchi, J.*
- Journal Title
  
  ACS Chem. Biol.
  
  Volume : 10 Pages : 1908-1915
- DOI
  10.1021/cb500609p
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Precipitate obtained following membrane separation of hydrothermally pretreated rice straw liquid revealed by 2D NMR to have high lignin content2015
- Author(s)
  Sasaki, K., Kikuchi, J. (12人中11番目）
- Journal Title
  
  Biotechnology for Biofuels
  
  Volume : 8 Pages : 88-88
- DOI
  10.1186/s13068-015-0273-4
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012, KAKENHI-PROJECT-26870355
[Journal Article] Methylated cytokinins from phytopathogen Rhodococcus fascians mimic plant hormone activity2015
- Author(s)
  Radhika, V., Kikuchi, J., (7人中5番目）
- Journal Title
  
  Plant Physiol
  
  Volume : 169 Pages : 1118-1126
- DOI
  10.1104/pp.15.00787
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Identification of reliable components in multivariate curve resolution-alternating least squares (MCR-ALS) for a data-driven approach across metabolic processes2015
- Author(s)
  Motegi, H., Kikuchi, J* (9人中9番目）
- Journal Title
  
  Sci. Rep.
  
  Volume : 5 Pages : 16710-16710
- DOI
  10.1038/srep15710
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Srengthening of the intestinal epithelial tight junction by Bifidobacterium bifidum2015
- Author(s)
  Chen-Yu Hsieh, Toshifumi Osaka, Eri Moriyama1, Yasuhiro Date, Jun Kikuchi, Satoshi Tsuneda
- Journal Title
  
  Physiol. Rep.
  
  Volume : 3
- DOI
  10.14814/phy2.12327
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-23360373, KAKENHI-PROJECT-25513012
[Journal Article] Bifidobacterium longum BB536 induces gut luminal metabolic changes through modulation of microbial community2015
- Author(s)
  Sugahara, H., Odamaki, T., Fukuda, S., Kato, T., Xiao, J.Z., Abe, F., Kikuchi, J., Ohno, H.
- Journal Title
  
  Sci. Rep
  
  Volume : 5 Pages : 13548-13548
- DOI
  10.1038/srep13548
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-26117725, KAKENHI-PROJECT-25513012
[Journal Article] A NMR-based, non-targeted multistep metabolic profiling revealed L-rhamnitol as a metabolite that characterised apples from different geographic origins2015
- Author(s)
  Satoru Tomita, Tadashi Nemoto, Yosuke Matsuo, Toshihiko Shoji, Fukuyo Tanaka, Hiroyuki Nakagawa, Hiroshi Ono, Jun Kikuchi, Mayumi Ohnishi-Kameyama, Yasuyo Sekiyama
- Journal Title
  
  Food Chem.
  
  Volume : 174 Pages : 163-172
- DOI
  10.1016/j.foodchem.2014.11.028
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-24580029, KAKENHI-PROJECT-25513012
[Journal Article] Profiling contents of water-soluble metabolites and mineral nutrients to evaluate the effects of pesticides and organic and chemical fertilizers on tomato fruit quality2015
- Author(s)
  Watanabe, M., Ohta, Y., Sun, L., Motoyama, N. and Kikuchi, J.
- Journal Title
  
  Food Chem.
  
  Volume : 169 Pages : 387-395
- Publisher
  ELSEVIER SCI LTD
- DOI
  10.1016/j.foodchem.2014.07.155
- Year and Date
  2015-02-15
- Language
  English
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Multidimensional high-resolution magic angle spinning and solution-state NMR characterization of 13C-labeled plant metabolites and lignocellulose2015
- Author(s)
  Mori T, Tsuboi Y, Ishida N, Nishikubo N, Demura T, Kikuchi J.
- Journal Title
  
  Sci. Rep.
  
  Volume : 5 Pages : 11848-11848
- DOI
  10.1038/srep11848
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114002, KAKENHI-PROJECT-25513012, KAKENHI-PROJECT-25291062
[Journal Article] Introduction of chemically labile substructures in Arabidopsis lignin through the use of the Ca dehydrogenase from Sphingobium sp. Strain SYK-62015
- Author(s)
  Kikuchi, J (22中15番目)
- Journal Title
  
  Plant Biotechnol. J.
  
  Volume : -
- DOI
  10.1111/pbi.12316
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Changes in lignin and polysaccharide components in 13 cultivars of rice straw following dilute acid pretreatment as studied by solution-state 2D 1H-13C NMR2015
- Author(s)
  Teramura, H., Sasaki, K., Oshima, T., Aikawa, S., Matsuda, F., Kawaguchi, H., Ogino, C., Yamazaki, M., Shirai, T., Okamoto, M., Kikuchi, J. and Kondo, A
- Journal Title
  
  PLoS ONE
  
  Volume : -
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Human metabolic, mineral and microbiota fluctuations across daily nutritional intakes visualized by data-driven approach2015
- Author(s)
  Misawa, T., Date, Y. and Kikuchi, J
- Journal Title
  
  J. Proteome Res.
  
  Volume : 14 Pages : 1526-1534
- DOI
  10.1021/pr501194k
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Pretreatment and integrated analysis of spectral data reveal seaweed similarity based on chemical diversity2015
- Author(s)
  Wei, F., Ito, K., Sakata, K., Date, Y. and Kikuchi, J.
- Journal Title
  
  Anal. Chem.
  
  Volume : 87 Pages : 2819-2826
- DOI
  10.1021/ac504211n
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] n vitro evaluation method for screening of candidate prebiotic foods2014
- Author(s)
  Date, Y., Nakanishi, Y., Fukuda, S. et al.
- Journal Title
  
  Food Chem.
  
  Volume : 152 Pages : 251-260
- DOI
  10.1016/j.foodchem.2013.11.126
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24658129, KAKENHI-PROJECT-25513012
[Journal Article] Toward better annotation in plant metabolomics: Isolation and structure elucidation of 36 specialized metabolites from Oryza sativa by using MS/MS and NMR analyses2014
- Author(s)
  Zhigang Yang, Ryo Nakabayashi, Yozo Okazaki, Tetsuya Mori, Satoshi Takamatsu, Susumu Kitanaka, Jun Kikuchi, Kazuki Saito
- Journal Title
  
  Metabolomics
  
  Volume : 10 Pages : 543-555
- DOI
  10.1007/s11306-013-0619-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24590028, KAKENHI-PROJECT-25513012
[Journal Article] Biogeochemical typing of paddy field by a data-driven approach revealing sub-systems within a complex environment;A pipeline to filtrate, organize and frame massive dataset from multi-omics analyses2014
- Author(s)
  Ogawa DM, Moriya S, Tsuboi Y, Date Y, Prieto-da-Silva AR, Rádis-Baptista G, Yamane T, Kikuchi J.
- Journal Title
  
  PLoS One
  
  Volume : 9
- DOI
  10.1371/journal.pone.0110723
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PLANNED-23117003, KAKENHI-PROJECT-25513012
[Journal Article] Chemical profiling of Jatropha tissues under different torrefaction conditions: application to biomass waste recovery2014
- Author(s)
  Watanabe, T., Shino, A., Akashi, K. and Kikuchi, J.
- Journal Title
  
  PLoS One
  
  Volume : 9
- DOI
  10.1371/journal.pone.0106893
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] 安定同位体標識による生体分子混合物ならびに代謝経路解析2014
- Author(s)
  菊地淳
- Journal Title
  
  生物工学会誌
  
  Volume : 92 Pages : 100-109
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] 食と代謝のメタボノミクス2014
- Author(s)
  菊地　淳
- Journal Title
  
  実験医学
  
  Volume : 32 Pages : 699-705
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] NMRにおけるイノベーション2014
- Author(s)
  菊地　淳
- Journal Title
  
  生物工学会誌
  
  Volume : 92 Pages : 561-561
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] NMRで挑む複雑系の分子宇宙2014
- Author(s)
  三澤拓真、伊藤研悟、菊地　淳
- Journal Title
  
  生物工学会誌
  
  Volume : 92 Pages : 504-510
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Multi-spectroscopic analysis of seed quality and 13C-stable-isotopologue monitoring in initial growth metabolism of Jatropha curcas L. using stable-isotope labeling2014
- Author(s)
  Komatsu, T., Oishi, R., Shino, A. Akashi, K. and Kikuchi, J
- Journal Title
  
  Metabolites
  
  Volume : 4 Pages : 1018-1033
- DOI
  10.3390/metabo4041018
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Comparative analysis of chemical and microbial profiles of estuarine sediments sampled from Kanto and Tohoku regions in Japan2014
- Author(s)
  Asakura, T., Date, Y. and Kikuchi, J
- Journal Title
  
  Anal. Chem.
  
  Volume : 86 Pages : 5425-5432
- DOI
  10.1021/ac5005037
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Multiple omics uncovers host-gut microbial mutualism during prebiotic fructooligosaccharide supplementation2014
- Author(s)
  Kato, T., Fukuda, S., Fujiwara, A., Suda, W., Hattori, M., Kikuchi, J. and Ohno, H..
- Journal Title
  
  DNA Res.
  
  Volume : 21 Pages : 469-480
- DOI
  10.1093/dnares/dsu013
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Metabolomic profiling of 13C-labelled cellulose digestion in a lower termite: insights into gut symbiont function2014
- Author(s)
  Tokuda, T., Tsuboi, Y., Kihara, K. Saito, S. Moriya, S. Lo, N. and Kikuchi, J
- Journal Title
  
  Proc. R. Soc. B
  
  Volume : 281 Pages : 20140990-20140990
- DOI
  10.1098/rspb.2014.0990
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012, KAKENHI-PROJECT-25660054, KAKENHI-PUBLICLY-26117722, KAKENHI-PROJECT-26292177
[Journal Article] Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan2014
- Author(s)
  Yoshida, S., Date, Y. and Kikuchi, J
- Journal Title
  
  Sci. Rep.
  
  Volume : 4 Pages : 7005-7005
- DOI
  10.1038/srep07005
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] 食の来た道還る道2014
- Author(s)
  菊地　淳
- Journal Title
  
  バイオインダストリー
  
  Volume : 31 Pages : 37-44
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] 分子複雑系2014
- Author(s)
  菊地　淳
- Journal Title
  
  NMR
  
  Volume : 5 Pages : 78-82
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] 複雑系高分子群に挑むバイオマスNMRの世界2014
- Author(s)
  小松功典、菊地　淳
- Journal Title
  
  細胞工学
  
  Volume : 33 Pages : 843-849
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] 安定同位体標識による生体分子混合物ならびに代謝経路解析2014
- Author(s)
  菊地　淳
- Journal Title
  
  生物工学会誌
  
  Volume : 92 Pages : 100-109
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Integrated analysis of seaweed components in seasonal fluctuation by data mining across heterogeneous chemical measurements with network visualization2014
- Author(s)
  Ito, K., Sakata, K., Date, Y. and Kikuchi, J.
- Journal Title
  
  Anal. Chem.
  
  Volume : 86 Pages : 1098-1105
- DOI
  10.1021/ac402869b
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Cellulose digestion and metabolisms induced biocatalytic transitions in anaerobic microbial ecosystems2014
- Author(s)
  Yamazawa, A., Iikura, T., Morioka, Y., Shino, A., Ogata, Y., Date, Y. and Kikuchi, J.
- Journal Title
  
  Metabolites
  
  Volume : 4 Pages : 36-52
- DOI
  10.3390/metabo4010036
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Visualizing microbial dechlorination processes in underground ecosystem by statistical correlation and network analysis approach2014
- Author(s)
  Yamazawa, A., Date, Y., Ito, K. and Kikuchi, J.
- Journal Title
  
  J. Biosci. Bioeng.
  
  Volume : 117 Pages : 305-309
- DOI
  10.1016/j.jbiosc.2013.08.010
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Solid, solution and gas-state NMR monitoring of 13C-cellulose degradation in an anaerobic microbial ecosystem2013
- Author(s)
  Yamazawa, A., Iikura, T., Shino, A., Date, Y., and Kikuchi, J.
- Journal Title
  
  Molecules
  
  Volume : 18 Pages : 9021-9033
- DOI
  10.3390/molecules18089021
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Differences in cellulosic supramolecular structure of compositionally similar rice straw affect biomass metabolism by paddy soil microbiota2013
- Author(s)
  Ogura, T., Date, Y. and Kikuchi, J.
- Journal Title
  
  PLoS ONE
  
  Volume : 8
- DOI
  10.1371/journal.pone.0066919
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Comprehensive signal assignment of 13C-labeled lignocellulose using multidimensional solution NMR and 13C chemical shift comparison with solid-state NMR2013
- Author(s)
  Komatsu, T and Kikuchi, J.
- Journal Title
  
  Anal. Chem.
  
  Volume : 85 Pages : 8857-8865
- DOI
  10.1021/ac402197h
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Selective signal detection in solid-state NMR using rotor synchronized dipolar dephasing for the analysis of hemicellulose in lignocellulosic biomass2013
- Author(s)
  Komatsu, T and Kikuchi, J.
- Journal Title
  
  J. Phys. Chem. Lett.
  
  Volume : 4 Pages : 2279-2283
- DOI
  10.1021/jz400978g
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25513012
[Journal Article] Metabolic sequences of anaerobic fermentation on glucose-based feeding substrates based on correlation analyses of microbial and metabolite profiling2012
- Author(s)
  Date Y, Iikura T, Yamazawa, A., Moriya S and Kikuchi J.
- Journal Title
  
  J. Proteome Res. 11
  
  Volume : 11 Pages : 5602-5610
- DOI
  10.1021/pr3008682
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] Physicochemical characterization of complex biochemical mixtures from diversed seaweeds2012
- Author(s)
  Date Y, Sakata K and Kikuchi J.
- Journal Title
  
  Polymer J.
  
  Volume : 44 Pages : 888-894
- DOI
  10.1038/pj.2012.105
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] Dynamic omics approach identifies nutrition-mediated microbial interactions2011
- Author(s)
  Nakanishi, Y., Fukuda, S., Chikayama, E. Kimura, Y., Ohno, H., Kikuchi, J.
- Journal Title
  
  J.Proteome Res.
  
  Volume : 10 Pages : 824-831
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] Evaluation of a semipolar solvent system as a step toward heteronuclear multidimensional NMR-based metabolomics for 13C-labeled bacteria, plants, and animals2011
- Author(s)
  Sekiyama, Y., Chikayama, E., Kikuchi, J.
- Journal Title
  
  Anal.Chem.
  
  Volume : 83 Pages : 719-726
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] ECOMICS: A web-based toolkit for investigating the biomolecular web in ecosystems using a transomics Approach.2011
- Author(s)
  Ogata Y, Chikayama E, Morioka Y, Everroad RC, Shino A, Matsushima A, Haruna H, Moriya S, Toyoda T, and Kikuchi J
- Journal Title
  
  PLoS ONE
  
  Volume : 7
- DOI
  10.1371/journal.pone.0030263
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] ECOMICS: Ecosystem Trans-OMICS Tools and Methods for Complex Environmental Samples and Datasets2011
- Author(s)
  Kikuchi J, Ogata Y and Shinozaki K
- Journal Title
  
  J. Ecosys. Ecogr.
  
  Volume : S2 Pages : 1-1
- DOI
  10.4172/2157-7625.S2-001
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] 代謝解析におけるNMR技術開発の現状と将来展望2010
- Author(s)
  菊地淳、関山恭代、伊達康博
- Journal Title
  
  Radioisotopes
  
  Volume : 59 Pages : 637-658
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] メタボロミクスとメタボノミクス2009
- Author(s)
  吉田欣史、久原とみ子、菊地淳
- Journal Title
  
  ぶんせき 7
  
  Pages : 371-378
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] Evaluation and characterization of bacterial metabolic dynamics by a novel profiling technique, real-time metabolotyping2009
- Author(s)
  Fukuda, S., Nakanishi, Y., Chikayama, E., Ohno, H., Hino, T., Kikuchi, J
- Journal Title
  
  PLoS ONE 4
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21247010
[Journal Article] Practical aspects of stable isotope labeling in higher plants for a hetero-nuclear NMR-based metabolomics2007
- Author(s)
  Kikuchi, J., Hirayama, T.
- Journal Title
  
  Method Mol. Biol. 358
  
  Pages : 273-286
- Data Source
  KAKENHI-PROJECT-17710191
[Journal Article] Structural and functional characterization of a mutant of Pseudocerastes persicus natriutic peptide2006
- Author(s)
  Elmi, M.M., Aminiasaab, M., Hondo, T., Kikuchi, J., Kuroda, Y., Naderi-Manesh, H., Sarbolouki, M.M.
- Journal Title
  
  Prot. Pept. Lett. 13
  
  Pages : 295-300
- Data Source
  KAKENHI-PROJECT-17710191
[Journal Article] In vivo NMR2006
- Author(s)
  Kikuchi, J., Akamine, K.
- Journal Title
  
  J. Spect. Soc. Jpn. 55
  
  Pages : 320-330
- Data Source
  KAKENHI-PROJECT-17710191
[Journal Article] Hetero-nuclear NMR-based metabolomics2006
- Author(s)
  Kikuchi, J., Hirayama, T.
- Journal Title
  
  Biotech. Agri. Forest. 57
  
  Pages : 93-101
- Data Source
  KAKENHI-PROJECT-17710191
[Journal Article] 多次元NMRメタボロ(ノ)ミクス法の有用性と今後の展望2005
- Author(s)
  菊地淳, 平山隆志
- Journal Title
  
  蛋白質核酸酵素 (印刷中)
- Data Source
  KAKENHI-PROJECT-15710171
[Journal Article] Effect of dielectric properties of solvents on the quality factor for a beyond 900 MHz cryogenic probe model2005
- Author(s)
  Horiuchi, T., Takahashi, M., Kikuchi, J., Yokoyama, S., Maeda, H.
- Journal Title
  
  J.Magn.Reson. 174
  
  Pages : 33-41
- Data Source
  KAKENHI-PROJECT-17710191
[Journal Article] Stable isotope labeling of Arabidopsis thaliana for an NMR-based metabolomics approach2004
- Author(s)
  Kikuchi et al.
- Journal Title
  
  Plant Cell Physiol. 45
  
  Pages : 1099-1104
- Data Source
  KAKENHI-PROJECT-15710171
[Journal Article] Thermal analyses of phospholipid mixtures by differential scanning calorimetry and effect of doping with a bolaform amphiphile
- Author(s)
  Sasaki, R., Sasaki, H., Fukuzawa, S., Kikuchi, J., Hirota, T., Tachibana, K.
- Journal Title
  
  Bull Chim. Soc. Jpn. (in press)
- Data Source
  KAKENHI-PROJECT-17710191
[Journal Article] Hetero-nuclear NMR-based metabolomics
- Author(s)
  Kikuchi, J., Hirayama, T.
- Journal Title
  
  Biotechn.Agri.Tech. (in press)
- Data Source
  KAKENHI-PROJECT-17710191
[Journal Article] Structural and functional characterization of a mutant of Pseudocerastes persicus natriutic peptide
- Author(s)
  Elmi, M.M., Aminiasaab, M., Hondo, T., Kikuchi, J., Kuroda, Y., Naderi-Manesh, H., Sarbolouki, M.M.
- Journal Title
  
  Prot.Pept.Lett. (in press)
- Data Source
  KAKENHI-PROJECT-17710191
[Presentation] Analysis of metabolite structure and its turnover by multi-dimensional NMR2014
- Author(s)
  Kikuchi, J
- Organizer
  Annotation and Identification of Small Biological Molecules
- Place of Presentation
  Gif-Sur-Yvitte, France
- Year and Date
  2014-10-23
- Invited
- Data Source
  KAKENHI-PROJECT-25513012
[Presentation] Analysis of microbial metabolism in the gut ecosystem2014
- Author(s)
  Kikuchi, J
- Organizer
  Korean Society for Biotechnolgy and Bioengineering
- Place of Presentation
  Gyeongjyu, Korea
- Year and Date
  2014-04-11
- Invited
- Data Source
  KAKENHI-PROJECT-25513012
[Presentation] Visualizing metabolic system catalyzed by microbial ecosystem using statistical correlation analysis2013
- Author(s)
  Kikuchi, J
- Organizer
  ISMAR2013
- Place of Presentation
  Rio de Janeiro, Brazil
- Data Source
  KAKENHI-PROJECT-25513012
[Presentation] 単離操作を経ない生体分子群および微生物叢複合系解析がもたらすインパクト2012
- Author(s)
  菊地淳
- Organizer
  日本農芸化学会2012年度京都大会
- Place of Presentation
  京都
- Year and Date
  2012-03-25
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] Seasonal succession of eukaryotic community detected by environmental sequences in Tokyo Bay2012
- Author(s)
  Yokoyama A, Kikuchi J, Tsuboi Y, Moriya S, Inagaki Y, Hashimoto T and Inouye I.
- Organizer
  Japan. Protist 2012
- Place of Presentation
  Oslo
- Year and Date
  2012-08-02
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] 水圏生態系における代謝プロファイリング技術の構築2011
- Author(s)
  葭田征司、伊達康博、守屋繁春、菊地淳
- Organizer
  日本農芸化学会2011大会
- Place of Presentation
  京都女子大学(京都)
- Year and Date
  2011-03-26
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] 微生物共培養時における代謝システムのオミックス解析2011
- Author(s)
  中西裕美子、福田真嗣、近山英輔、木村弥生、大野博司、菊地淳
- Organizer
  日本農芸化学会2011大会
- Place of Presentation
  京都女子大学(京都)
- Year and Date
  2011-03-26
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] イオノームーメタボローム相関法による海藻多糖類のキャラクタリゼーション2011
- Author(s)
  伊達康博、坂田研二、菊地淳
- Organizer
  日本農芸化学会2011大会
- Place of Presentation
  京都女子大学(京都)
- Year and Date
  2011-03-26
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] 海藻類におけるバイオマスプロファイリング技術の構築2011
- Author(s)
  坂田研二、伊達康博、菊地淳
- Organizer
  日本農芸化学会2011大会
- Place of Presentation
  京都女子大学(京都)
- Year and Date
  2011-03-26
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] オミクス情報に基づく藻類・ブロティスト複合系の多様性解明へのアプローチ2011
- Author(s)
  横山亜紀子, 守屋繁春, 菊地淳, 兪一〓, Craig Evarroad, Diogo Ogawa, 皿井千裕, 稲垣祐司, 中山剛, 石田健一郎, 橋本哲男, 渡辺信, 井上勲
- Organizer
  日本藻類学会35回大会
- Place of Presentation
  富山大学(富山)
- Year and Date
  2011-03-28
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] 種々の生物にお,けるイオノーム・メタボローム・バイオマスの相関解析2011
- Author(s)
  菊地淳、伊達康博、坪井裕理、近山英輔
- Organizer
  日本農芸化学会2011大会
- Place of Presentation
  京都女子大学(京都)
- Year and Date
  2011-03-26
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] オミクス情報に基づく藻類・プロティスト複合系の多様性解明へのアプローチ2011
- Author(s)
  横山亜紀子,守屋繁春,菊地淳,兪一〓,Evarroad C,Ogawa D,皿井千裕,稲垣祐司,中山剛,石田健一郎,橋本哲男,渡辺信,井上勲
- Organizer
  日本藻類学会35回大会
- Place of Presentation
  富山
- Year and Date
  2011-03-28
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] 水圏エコミクス研究の始動:微細藻類のエコシステムの包括的理解を目指して.2009
- Author(s)
  C.Everroad, S.Yoshida, Y.Tsuboi, J.Kikuchi, S.Moriya
- Organizer
  Poster given at the 4th Metabolome Symposium
- Place of Presentation
  横浜・横浜サイエンスハイスクール
- Year and Date
  2009-11-19
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] 昆虫消化系におけるセルロース代謝メカニズム
- Author(s)
  徳田　岳・菊地　淳
- Organizer
  第66回日本生物工学会大会
- Place of Presentation
  札幌市・札幌コンベンションセンター
- Year and Date
  2014-09-09 – 2014-09-11
- Invited
- Data Source
  KAKENHI-PROJECT-26292177
[Presentation] Cellulose catabolism in the gut of the termite, Hodotermopsis sjostedti
- Author(s)
  Tokuda, G., Kikuchi, J.
- Organizer
  XVII International Congress of IUSSI
- Place of Presentation
  オーストラリア・ケアンズコンベンションセンター
- Year and Date
  2014-07-13 – 2014-07-18
- Invited
- Data Source
  KAKENHI-PROJECT-26292177
[Presentation] シロイヌナズナの根の水の状態や輸送に異常のある変異体の探索に向けて
- Author(s)
  奈良久美、長井理香、丹後真奈実、伊達康博、石川春樹、高瀬智之、菊地淳
- Organizer
  日本植物学会第76回大会
- Place of Presentation
  兵庫県立大学姫路書写キャンパス
- Data Source
  KAKENHI-PROJECT-24657032
[Presentation] 単離操作を経ない生体分子群および微生物叢複合系解析がもたらすインパクト
- Author(s)
  菊地淳
- Organizer
  日本農芸化学会2012年度京都大会
- Place of Presentation
  京都女子大学（京都）
- Invited
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] Seasonal succession of eukaryotic community detected by environmental sequences in Tokyo Bay, Japan.
- Author(s)
  Yokoyama A, Kikuchi J, Tsuboi Y, Moriya S, Inagaki Y, Hashimoto T and Inouye I.
- Organizer
  Protist 2012
- Place of Presentation
  Oslo, Norway
- Data Source
  KAKENHI-PROJECT-21247010
[Presentation] シロイヌナズナを用いた根の水の状態の比較の試み
- Author(s)
  長井理香、福岡美香、高瀬智敬、伊達康博、菊地淳、石田信昭、奈良久美
- Organizer
  第１８回ＮＭＲマイクロイメージング研究会
- Place of Presentation
  金沢勤労者プラザ（石川県金沢市）
- Year and Date
  2014-08-11 – 2014-08-12
- Data Source
  KAKENHI-PROJECT-24657032

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# of Collaborated Projects : 1results

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36. 塔野岡純子 (00713314)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
37. 本多大輔 (30322572)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
38. 長井敏 (80371962)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
39. ISHIKAWA Haruki

# of Collaborated Projects : 1results

# of Collaborated Products : 1results
40. NAGAI Rika

# of Collaborated Projects : 1results

# of Collaborated Products : 2results
41. HONGOH Yuichi

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
42. KINJO Yukihiro

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
43. KUMARA Rohitha P.

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
44. NALEPA Christine A.

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
45. PARK Yung Chul

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
46. sasaki kengo

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
47. KIHARA kumiko

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
48. 渡邉信

# of Collaborated Projects : 0results

# of Collaborated Products : 2results
49. 大坂利文

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
50. 常田聡

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
51. 福田真嗣

# of Collaborated Projects : 0results

# of Collaborated Products : 2results
52. 北中進

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
53. 出村拓

# of Collaborated Projects : 0results

# of Collaborated Products : 1results

KIKUCHI Jun 菊地 淳

KIKUCHI Jyun 菊池 純

菊池 淳 キクチ ジュン

Research Projects

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Study on the marine ecological role of labyrinthyulidsOngoing

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有機物の長期連用が土壌微生物群集に及ぼす影響の分子生態学的解明Ongoing

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Molecluar ecological analysis of nitrogen fixation mechanism in the symbiotic microbial community of sweet potatoOngoing

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Explorations of metabolic factors involved in efficient cellulolytic systems in insects

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Exploring biomarker identification evaluating ecosystem fructuation in natural samplesPrincipal Investigator

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New approaches towards high-value added lignin production by the combination of metabolic engineering and organic chemistry

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The study of molecular mechanism of water transport in the roots of Arabidopsis thaliana: the challenge to MRI.

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Efficient cellulolytic systems viewed from metabolomics analyses

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Novel molecular function of mushroom in carbon dioxide assimilation

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High-throughput development of disease model mice by using next-generation technologies.

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Basal construction studies for the diversity of algae-protist complexes

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物質循環計測を見据えた多次元NMRメタボノミクス法の開発Principal Investigator

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生体膜上で起こる相互作用解明のための脂質二重膜配向法の開発Principal Investigator

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KIKUCHI Jun 菊地淳

KIKUCHI Jyun 菊池純

菊池淳キクチジュン