Irie Naoki 入江直樹

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IRIE Naoki 入江直樹

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Researcher Number	10536121
Other IDs	https://orcid.org/0000-0002-6720-381X
Affiliation (Current)	2024: 総合研究大学院大学, 統合進化科学研究センター, 教授
Affiliation (based on the past Project Information) *help	2023 – 2024: 総合研究大学院大学, 統合進化科学研究センター, 教授 2016 – 2022: 東京大学, 大学院理学系研究科(理学部), 准教授 2013 – 2015: 東京大学, 理学(系)研究科(研究院), 准教授 2013: 東京大学, 大学院理学系研究科(理学部), 准教授 2009 – 2012: The Institute of Physical and Chemical Research, 形態進化研究グループ, 研究員
Review Section/Research Field	Principal Investigator Basic Section 45030:Biodiversity and systematics-related / Medium-sized Section 44:Biology at cellular to organismal levels, and related fields / Biological Sciences / Pathology, Infection/Immunology, and related fields / Evolutionary biology / Developmental biology / 基礎ゲノム科学 Except Principal Investigator Biological Sciences
Keywords	Principal Investigator 発生 / 進化発生学 / バイオインフォマティクス / 進化 / EvoDevo / エピジェネティクス / 母由来細胞 / 発生生物学 / マイクロキメリズム / 進化可能性 … More / 反復説 / ボディプラン / 動物門 / キメラ / 細胞レベルのエピジェネティクス / ゲノム / 比較発生 / 砂時計モデル / 安定性 / 進化生物学 / 頑健性 / 発生安定性 / ゆらぎ / 発生拘束 / 進化発生生物学 / 先天異常 / 母児間免疫病 / 発生砂時計モデル / 発生学 / ファイロティピック段階 / トランスクリプトーム / ゲノム調節 / システムゲノム … More Except Principal Investigator 理論構築 / 実験進化学 / 揺らぎ応答理論 / 表現型進化 / 進化生物学 / 発生学 / ゲノム科学 / 進化発生学 / カメ / 脊椎動物 / バイオインフォマティクス / ゲノム / 発生 / 進化 Less

Bodyplan analysis and developmental re-definition of animal phylum.Principal Investigator
- Principal Investigator
  
  入江直樹
- Project Period (FY)
  2023 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 45030:Biodiversity and systematics-related
- Research Institution
  The Graduate University for Advanced Studies
胎児期に移入する母由来細胞集団の解明とその生物学的意義の探求Principal Investigator
- Principal Investigator
  
  入江直樹
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 44:Biology at cellular to organismal levels, and related fields
- Research Institution
  The University of Tokyo
Testing possible contribution of maternal microchimeric cells to biliary atresiaPrincipal Investigator
- Principal Investigator
  
  IRIE Naoki
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Research Field
  
  Pathology, Infection/Immunology, and related fields
- Research Institution
  The University of Tokyo
Measuring molecular fluctuation of chordate developmental system and its contribution toward evolutionary conservationPrincipal Investigator
- Principal Investigator
  
  Irie Naoki
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Evolutionary theory for constrained and directional diversities
- Principal Investigator
  
  Kuratani Shigeru
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Institute of Physical and Chemical Research
In search for a general tendency of chordate embryonic evolution by analyzing genetic expression patterns during developmentPrincipal Investigator
- Principal Investigator
  
  Irie Naoki
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Young Scientists (A)
- Research Field
  
  Evolutionary biology
- Research Institution
  The University of Tokyo
Study toward evolutionary formulation of vertebrate embryogenesisPrincipal Investigator
- Principal Investigator
  
  IRIE Naoki
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Developmental biology
- Research Institution
  The University of Tokyo
  The Institute of Physical and Chemical Research
Changes in developmental program in the acquisition of novel morphological patterns of the turtle shell
- Principal Investigator
  
  KURATANI Shigeru
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
Identification of vertebrate phylotypic stage by transcriptome analysisPrincipal Investigator
- Principal Investigator
  
  IRIE Naoki
- Project Period (FY)
  2009 – 2010
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  The Institute of Physical and Chemical Research

[Book] 胎児期に刻まれた進化の痕跡2015
- Author(s)
  入江直樹
- Total Pages
  152
- Publisher
  慶應大学出版会
- Data Source
  KAKENHI-PROJECT-15H05603
[Book] 細胞工学　2014年１月号　特集号2014
- Author(s)
  入江　直樹
- Total Pages
  5
- Publisher
  秀潤社
- Data Source
  KAKENHI-PLANNED-22128003
[Book] 胚発生のロバストネスは進化にバイアスをかけているか？2014
- Author(s)
  入江直樹
- Total Pages
  5
- Publisher
  細胞工学
- Data Source
  KAKENHI-PROJECT-24570243
[Book] New Principles in Developmental Processes2014
- Author(s)
  Irie, N., Nagashima, H., Kuratani, S
- Total Pages
  12
- Publisher
  Springer Japan
- Data Source
  KAKENHI-PLANNED-22128003
[Book] 物理科学月刊誌　パリティ 2013年１月号特集：物理科学、この１年「進化と発生の関係性定式化にみる生物のやわらかさ」2013
- Author(s)
  入江直樹
- Total Pages
  3
- Publisher
  丸善出版
- Data Source
  KAKENHI-PROJECT-24570243
[Book] 脊椎動物ファイロタイプとボディプラン進化2013
- Author(s)
  入江直樹
- Total Pages
  5
- Publisher
  遺伝
- Data Source
  KAKENHI-PROJECT-24570243
[Book] 遺伝　2013年３月号「脊椎動物ファイロタイプとボディプラン進化」2013
- Author(s)
  入江直樹、倉谷滋
- Total Pages
  6
- Publisher
  株式会社エヌ・ティー・エス
- Data Source
  KAKENHI-PROJECT-24570243
[Book] 実験医学2011
- Author(s)
  入江直樹、連利博
- Publisher
  母児間マイクロキメリズムが問いかける自己と他者免疫学・再生医学・臨床医学への展開,Update Review <羊土社>29(6)
- Data Source
  KAKENHI-PROJECT-21710195
[Book] 母児間マイクロキメリズムが問いかける自己と他者(実験医学)2011
- Author(s)
  入江直樹
- Total Pages
  6
- Publisher
  羊土社実験医学
- Data Source
  KAKENHI-PROJECT-21710195
[Book] 実験医学2011
- Author(s)
  八谷剛史、入江直樹、荒川和晴
- Publisher
  Close Up実験法<羊土社>次世代シークエンサー活用術
- Data Source
  KAKENHI-PROJECT-21710195
[Journal Article] Stability in gene expression and body-plan development leads to evolutionary conservation.2023
- Author(s)
  Yui Uchida*, Hiroyuki Takeda, Chikara Furusawa & Naoki Irie*
- Journal Title
  
  EvoDevo
  
  Volume: vol. 14, no.4 Issue: 1
- DOI
  10.1186/s13227-023-00208-w
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06387
[Journal Article] Distinguishing Evolutionary Conservation from Derivedness.2022
- Author(s)
  Jason Cheok Kuan Leong*, Masahiro Uesaka, Naoki Irie*
- Journal Title
  
  Life
  
  Volume: 12(3), 440 Issue: 3 Pages: 440-440
- DOI
  10.3390/life12030440
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06387
[Journal Article] The pentameric hydrocoel lobes organize adult pentameral structures in a sea cucumber, Apostichopus japonicus2022
- Author(s)
  Udagawa Sumio、Nagai Akiko、Kikuchi Mani、Omori Akihito、Tajika Atsushi、Saito Mieko、Miura Toru、Irie Naoki、Kamei Yasuhiro、Kondo Mariko
- Journal Title
  
  Developmental Biology
  
  Volume: 492 Pages: 71-78
- DOI
  10.1016/j.ydbio.2022.09.002
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K18240, KAKENHI-PLANNED-20H05886, KAKENHI-PROJECT-20H05702, KAKENHI-PROJECT-20H02586, KAKENHI-PROJECT-21J11134, KAKENHI-PROJECT-20K20303, KAKENHI-PLANNED-17H06387
[Journal Article] Measuring potential effects of the developmental burden associated with the vertebrate notochord.2022
- Author(s)
  Fujimoto S, Yamanaka K, Tanegashima C, Nishimura O, Kuraku S, Kuratani S, and Irie N.
- Journal Title
  
  J Exp Zool B Mol Dev Evol.
  
  Volume: 338 Issue: 1-2 Pages: 129-136
- DOI
  10.1002/jez.b.23032
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06385, KAKENHI-PLANNED-17H06387
[Journal Article] Whole-embryonic identification of maternal microchimeric cell types in mouse using single-cell RNA sequencing2022
- Author(s)
  Fujimoto Kana、Nakajima Akira、Hori Shohei、Tanaka Yumiko、Shirasaki Yoshitaka、Uemura Sotaro、Irie Naoki
- Journal Title
  
  Scientific Reports
  
  Volume: 12 Issue: 1 Pages: 18313-18313
- DOI
  10.1038/s41598-022-20781-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K18232, KAKENHI-PROJECT-21K19254, KAKENHI-PROJECT-22K19422, KAKENHI-PLANNED-22H05191, KAKENHI-PROJECT-21H04801
[Journal Article] Potential contribution of intrinsic developmental stability toward body plan conservation2022
- Author(s)
  Uchida Yui、Shigenobu Shuji、Takeda Hiroyuki、Furusawa Chikara、Irie Naoki
- Journal Title
  
  BMC Biology
  
  Volume: 20 Issue: 1 Pages: 82-82
- DOI
  10.1186/s12915-022-01276-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06389, KAKENHI-PLANNED-17H06387
[Journal Article] Postnatal depletion of maternal cells biases T lymphocytes and natural killer cells' profiles toward early activation in the spleen.2022
- Author(s)
  Castellan Flore*, and Naoki Irie*
- Journal Title
  
  Biology Open
  
  Volume: 11 (11) Issue: 11
- DOI
  10.1242/bio.059334
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21K19254
[Journal Article] Emergent roles of maternal microchimerism inpostnatal development.2022
- Author(s)
  Alexandria Borges*, Castellan Flore, and Naoki Irie*
- Journal Title
  
  Development, Growth & Differentiation
  
  Volume: 65(1) Issue: 1 Pages: 75-81
- DOI
  10.1111/dgd.12830
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21K19254
[Journal Article] Derivedness Index for Estimating Degree of Phenotypic Evolution of Embryos: A Study of Comparative Transcriptomic Analyses of Chordates and Echinoderms2021
- Author(s)
  Jason Cheok Kuan Leong*, Yongxin Li, Masahiro Uesaka, Yui Uchida, Akihito Omori, Meng Hao, Wenting Wan, Yang Dong, Yandong RenSi Zhang, Tao Zeng, Fayou Wang, Luonan Chen, Gary Wessel, Brian T. Livingston, Cynthia Bradham, Wen Wang, Naoki Irie*
- Journal Title
  
  Front. Cell Dev. Biol.
  
  Volume: 26
- DOI
  10.3389/fcell.2021.749963
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Journal Article] The developmental hourglass model and recapitulation: An attempt to integrate the two models.2021
- Author(s)
  Uesaka, M., Kuratani, S., and Irie, N.
- Journal Title
  
  J Exp Zool B Mol Dev Evol.
  
  Volume: in press Issue: 1-2 Pages: 1-11
- DOI
  10.1002/jez.b.23027
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06385, KAKENHI-PROJECT-18K14711, KAKENHI-PLANNED-17H06387
[Journal Article] How can recapitulation be reconciled with modern concepts of evolution?2021
- Author(s)
  Kuratani S, Uesaka M, Irie N.
- Journal Title
  
  J Exp Zool B Mol Dev Evol.
  
  Volume: in press Issue: 1-2 Pages: 1-8
- DOI
  10.1002/jez.b.23020
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06385, KAKENHI-PROJECT-18K14711, KAKENHI-PLANNED-17H06387
[Journal Article] Whole embryonic detection of maternal microchimeric cells highlights significant differences in their numbers among individuals2021
- Author(s)
  Fujimoto K, et al.
- Journal Title
  
  Plos one
  
  Volume: 16 Issue: 12 Pages: 1-11
- DOI
  10.1371/journal.pone.0261357
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K22526, KAKENHI-PROJECT-18H04025, KAKENHI-PROJECT-21H04801, KAKENHI-PROJECT-21J10888, KAKENHI-PROJECT-21K19254
[Journal Article] The developmental transcriptome for Lytechinus variegatus exhibits temporally punctuated gene expression changes2020
- Author(s)
  John D. Hogan, et al. (Naoki Irie 19名中16番目)
- Journal Title
  
  Developmental Biology
  
  Volume: 460:2 Issue: 2 Pages: 139-154
- DOI
  10.1016/j.ydbio.2019.12.002
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Journal Article] Toward understanding of evolutionary constraints: experimental and theoretical approaches2020
- Author(s)
  Chikara Furusawa*, Naoki Irie*
- Journal Title
  
  Biophysical Reviews
  
  Volume: 12 Issue: 5 Pages: 1155-1161
- DOI
  10.1007/s12551-020-00708-2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PLANNED-17H06389
[Journal Article] Genomic insights of body plan transitions from bilateral to pentameric symmetry in Echinoderms2020
- Author(s)
  Yongxin Li, et al. (35名中 35番目 Naoki Irie*)
- Journal Title
  
  Communications Biology
  
  Volume: 3:371 Issue: 1 Pages: 371-371
- DOI
  10.1038/s42003-020-1091-1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-18K14711
[Journal Article] Recapitulation-like developmental transitions of chromatin accessibility in vertebrates2019
- Author(s)
  Uesaka Masahiro、Kuratani Shigeru、Takeda Hiroyuki、Irie Naoki
- Journal Title
  
  Zoological Letters
  
  Volume: 5 Issue: 1 Pages: 33-33
- DOI
  10.1186/s40851-019-0148-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K14711, KAKENHI-PLANNED-17H06387, KAKENHI-PLANNED-17H06385
[Journal Article] The phylum Vertebrata: a case for zoological recognition.2018
- Author(s)
  Irie, N., Kuratani, S., and Satoh, N.
- Journal Title
  
  Zoological Lett
  
  Volume: 4 Issue: 1 Pages: 32-32
- DOI
  10.1186/s40851-018-0114-y
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06385, KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-16H04824
[Journal Article] Embryonic lethality is not sufficient to explain hourglass-like conservation of vertebrate embryos2018
- Author(s)
  Yui Uchida, Masahiro Uesaka, Takayoshi Yamamoto, Hiroyuki Takeda and Naoki Irie
- Journal Title
  
  EvoDevo
  
  Volume: 9:7 Issue: 1 Pages: 1-11
- DOI
  10.1186/s13227-018-0095-0
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H05603, KAKENHI-PROJECT-15J06414, KAKENHI-PROJECT-17J06225, KAKENHI-PLANNED-17H06387
[Journal Article] Remaining questions related to the hourglass model in vertebrate evolution.2017
- Author(s)
  Naoki Irie
- Journal Title
  
  Current Opinion in Genetics & Development
  
  Volume: 45 Pages: 103-107
- DOI
  10.1016/j.gde.2017.04.004
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05603
[Journal Article] Weighted gene co-expression network analysis reveals potential genes involved in early metamorphosis process in sea cucumber Apostichopus japonicus2017
- Author(s)
  Yongxin Li, Mani Kikuchi, Xueyan Li, Qionghua Gao, Zijun Xiong, Yandong Ren, Ruoping Zhao, Bingyu Mao, Mariko Kondo, Naoki Irie, Wen Wang*
- Journal Title
  
  BBRC
  
  Volume: 495:1 Issue: 1 Pages: 1395-1402
- DOI
  10.1016/j.bbrc.2017.11.154
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H05603
[Journal Article] Centromere evolution and CpG methylation during vertebrate speciation2017
- Author(s)
  Kazuki Ichikawa, Shingo Tomioka, Yuta Suzuki, Ryohei Nakamura, Koichiro Doi, Jun Yoshimura, Masahiko Kumagai, Yusuke Inoue, Yui Uchida, Naoki Irie, Hiroyuki Takeda* & Shinich Morishita*
- Journal Title
  
  Nature Communications
  
  Volume: 1833 Issue: 1 Pages: 1722-1730
- DOI
  10.1038/s41467-017-01982-7
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H05603, KAKENHI-PROJECT-15J03645, KAKENHI-PROJECT-16H06279
[Journal Article] Constrained vertebrate evolution by pleiotropic genes.2017
- Author(s)
  Hu H, Uesaka M, Guo S, Shimai K, Lu TM, Li F, Fujimoto S, Ishikawa M, Liu S, Sasagawa Y, Zhang G, Kuratani S, Yu JK, Kusakabe TG, Khaitovich P, Irie N; EXPANDE Consortium.
- Journal Title
  
  Nat Ecol Evol
  
  Volume: 1 Issue: 11 Pages: 1722-1730
- DOI
  10.1038/s41559-017-0318-0
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06385, KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H02416, KAKENHI-PROJECT-16H04724, KAKENHI-PROJECT-15H05603, KAKENHI-PROJECT-15J06414
[Journal Article] Unexpected link between polyketide synthase and calcium carbonate biomineralization2015
- Author(s)
  Motoki Hojo, Ai Omi, Gen Hamanaka, Kazutoshi Shindo, Atsuko Shimada, Mariko Kondo, Takanori Narita, Masato Kiyomoto, Yohei Katsuyama, Yasuo Ohnishi, Naoki Irie and Hiroyuki Takeda
- Journal Title
  
  Zoological Letters
  
  Volume: 1 Issue: 1 Pages: 1-16
- DOI
  10.1186/s40851-014-0001-0
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24570243, KAKENHI-PROJECT-24657148, KAKENHI-PLANNED-22127002
[Journal Article] Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.2014
- Author(s)
  Richard E.　et al.(著者55人中45番目）
- Journal Title
  
  Science
  
  Volume: 12 Issue: 6215 Pages: 1254449-1254449
- DOI
  10.1126/science.1254449
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22128003, KAKENHI-PROJECT-24570243
[Journal Article] Turtle ghrelin.2014
- Author(s)
  Juan Pascual-Anaya, Amonida Zaddissa, Bronwen Aken, Guojie Zhang and Naoki Irie
- Journal Title
  
  Nature Genetics
  
  Volume: 46 Issue: 6 Pages: 526-526
- DOI
  10.1038/ng.2988
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22128003, KAKENHI-PROJECT-24570243
[Journal Article] Evolutionary origin of vertebrate head: The problem of head segmentation in vertebrates.2014
- Author(s)
  Onai, T., Irie, N., and Kuratani, S.
- Journal Title
  
  Ann. Rev. Genom. & Human Genet.
  
  Volume: 15 Issue: 1 Pages: 443-459
- DOI
  10.1146/annurev-genom-091212-153404
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22128003, KAKENHI-PROJECT-24570243, KAKENHI-PROJECT-24770222
[Journal Article] The developmental hourglass model: a predictor of the basic body plan?2014
- Author(s)
  Naoki Irie*, and Shigeru Kuratani
- Journal Title
  
  Development
  
  Volume: 141 Issue: 24 Pages: 4649-4655
- DOI
  10.1242/dev.107318
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24570243
[Journal Article] The developmental hourglass model: a predictor of the basic body plan?2014
- Author(s)
  Irie, N., and Kuratani, S.
- Journal Title
  
  Development
  
  Volume: 141 Pages: 4649-4655
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-22128003
[Journal Article] The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan.2013
- Author(s)
  Wang, Z., Pascual-Anaya, J., Zadissa, A., Li, W., Niimura, Y., Huang, Z., Li, C., White, S., Xiong, Z., Fang, D., et al.
- Journal Title
  
  Nature genetics
  
  Volume: 45 Issue: 6 Pages: 701-706
- DOI
  10.1038/ng.2615
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22128008, KAKENHI-PROJECT-23770271, KAKENHI-PROJECT-24570243, KAKENHI-PLANNED-22128003
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Journal Title
  
  Nature Communications
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21710195
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis2011
- Author(s)
  Irie, N., Kuratani, S.
- Journal Title
  
  Nature Commnications
  
  Volume: Mar22 Issue: 1
- DOI
  10.1038/ncomms1248
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis.2011
- Author(s)
  Irie, N., Kuratani, S.
- Journal Title
  
  Nature Communications
  
  Volume: (in press)
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis2011
- Author(s)
  Irie,N., Kuratani,S
- Journal Title
  
  Nature Communications Mar.
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Postnatal depletion of maternal cells shifts splenic NK and CD8+ T-cell profiles toward mature and activated phenotypes2022
- Author(s)
  Castellan Flore, Naoki Irie
- Organizer
  FOCIS Annual meeting 2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K19254
[Presentation] 動物の解剖学的基本パターンはなぜ進化的に保守的なのか2022
- Author(s)
  入江直樹
- Organizer
  第127 回日本解剖学会総会・全国学術集会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Postnatal depletion of maternal cells biases immune cytotoxic cells' profile toward maturation and activation in the spleen2022
- Author(s)
  Castellan Flore, Naoki Irie
- Organizer
  Single Cell Biology at Wellcome Sanger
- Data Source
  KAKENHI-PROJECT-21K19254
[Presentation] 我々の体内の母親由来細胞の頻度や細胞種を決める因子は何か？2022
- Author(s)
  梅村太一郎, 入江直樹
- Organizer
  日本分子生物学会
- Data Source
  KAKENHI-PROJECT-21K19254
[Presentation] Postnatal depletion of maternal cells biases immune cytotoxic cells' profile toward maturation and activation in the spleen2022
- Author(s)
  Castellan Flore, Naoki Irie
- Organizer
  日本発生生物学会
- Data Source
  KAKENHI-PROJECT-21K19254
[Presentation] Comprehensive identification of maternal microchimeric cell types in fetus2021
- Author(s)
  Kana Fujimoto, Naoki Irie
- Organizer
  Maternal-Fetal Newborn Immunity
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K19254
[Presentation] Elucidation of cell type and distribution of maternal microchimeric cells in fetus2021
- Author(s)
  Kana Fujimoto, Naoki Irie
- Organizer
  23rd International Congress of Zoology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K19254
[Presentation] Internal factors of biological system that biases evolutionary outcome2021
- Author(s)
  Naoki Irie
- Organizer
  ICG-16, Qindao
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Possible constraints by developmental robustness2021
- Author(s)
  Naoki Irie
- Organizer
  2nd AsiaEvo
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 発生頑健性による進化の慣性力2021
- Author(s)
  入江直樹
- Organizer
  日本分子生物学会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Can we predict evolutionary outcome of animal body plan?2021
- Author(s)
  Naoki Irie
- Organizer
  International Congress of Zoology Cape Town
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 動物表現型進化の予測にむけて2020
- Author(s)
  入江直樹
- Organizer
  ExCELLS シンポジウム
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 動物ボディプランにみられる進化的慣性力の仕組みは？2020
- Author(s)
  入江直樹
- Organizer
  日本進化学会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Developmental robustness may bias macroevolutionary outcome2020
- Author(s)
  Naoki Irie
- Organizer
  17th Spanish Society for Developmental Biology Meeting (Spain, online)
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 遺伝子の使い回しは多様化にとって諸刃の剣か2020
- Author(s)
  入江直樹
- Organizer
  日本分子生物学会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 胎仔に移入する母由来間イクロキメリズム細胞とは何者なのだろうか？2019
- Author(s)
  Kana Fujimoto, Naoki Irie
- Organizer
  The 42nd Annual Meeting of the Molecular Biology Society of Japan
- Data Source
  KAKENHI-PROJECT-17K19547
[Presentation] Maternal microchimeric cells in shaping the developing immune system2019
- Author(s)
  Flore Castellan, Naoki Irie
- Organizer
  52nd Annual Meeting of the Japanese Society of Developmental Biology
- Data Source
  KAKENHI-PROJECT-17K19547
[Presentation] 胎児期に移入する母親細胞とはどのような細胞なのだろう？2019
- Author(s)
  Kana Fujimoto, Naoki Irie
- Organizer
  第31回　高遠・分子細胞生物学シンポジウム
- Data Source
  KAKENHI-PROJECT-17K19547
[Presentation] Potential double-edged sword effect of gene re-usage toward evolutionary diversification2019
- Author(s)
  Naoki Irie
- Organizer
  Molecular Biology Society of Japan
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Possible bias toward micro- and macro-evolutionary conservation by developmental systems2019
- Author(s)
  Naoki Irie
- Organizer
  Workshoo reconciling micro-macro evolution (Oslo)
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Do echinoderm embryos follow hourglass-like divergence?2019
- Author(s)
  Naoki Irie
- Organizer
  ICG-Ocean 2019
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] What makes animal embryos to follow the hourglass model?2019
- Author(s)
  Naoki Irie
- Organizer
  日本生物物理学会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Maternal microchimeric cells in shaping the developing immune system2019
- Author(s)
  Flore Castellan, Naoki Irie
- Organizer
  EMBO Single Cell Biology workshop
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K19547
[Presentation] Development and Evolution2019
- Author(s)
  Naoki Irie
- Organizer
  SERB School in Evolutionary Biology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Could have “small phenotypic fluctuation” contributed to the evolutionary conservation in vertebrate embryogenesis?2019
- Author(s)
  Yui Uchida, Naoki Irie
- Organizer
  21st Annual Meeting of the Society of Evolutionary Studies, Japan
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 遺伝子の使い回しは進化にとって諸刃の剣か？2018
- Author(s)
  入江直樹
- Organizer
  再生学異分野融合研究会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 複雑な遺伝子制御を持つ動物ほど進化可能性が低いかもしれない2018
- Author(s)
  入江直樹
- Organizer
  生命の起源および進化学会
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] “Cost of complexity” hypothesis supported in animal embryonic evolution?2018
- Author(s)
  Naoki Irie
- Organizer
  The 1st AsiaEvo conference
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Characterization of the phenotypes and functions of maternal cells in biliary atresia2018
- Author(s)
  Flore Castellan, Naoki Irie
- Organizer
  EMBO Practical course “Molecular interrogation of single-cells to decipher population heterogeneity and plasticity”
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K19547
[Presentation] Gene re-usages constrained the evolvability of animal bodyplan?2018
- Author(s)
  Naoki Irie
- Organizer
  EvoDevo Seminar series, Cambridge University
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 複雑な遺伝子制御を持つ動物ほど進化可能性が低いかもしれない2018
- Author(s)
  入江直樹
- Organizer
  生命の起源および進化学会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] 表現型揺らぎから探る進化の方向性と拘2018
- Author(s)
  入江直樹
- Organizer
  日本進化学会
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Cost of complexity” contributed to the vertebrate bodyplan conservation?2018
- Author(s)
  Naoki Irie
- Organizer
  Euro EvoDevo
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] The developmental hourglass model in animal embryogenesis2018
- Author(s)
  Naoki Irie
- Organizer
  Developmental Biology of Sea Urchin and other Marine Invertebrates
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] The developmental hourglass model: the law of embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  From Genetic Networks to a Cellular Wiring Diagram
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] The developmental hourglass model: the law of embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  From Genetic Networks to a Cellular Wiring Diagram
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] What are the potential mechanisms that made vertebrates’ bodyplan conserved?2017
- Author(s)
  Naoki Irie
- Organizer
  50th Anniversary Meeting of Japanese Society of Developmental Biologists
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] What are the potential mechanisms that made vertebrates’ bodyplan conserved?2017
- Author(s)
  Naoki Irie
- Organizer
  50th Anniversary Meeting of Japanese Society of Developmental Biologists
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] In search for a general law of animal embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  The 12th International Workshop on Advanced Genomics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 複雑な遺伝子制御を持つ動物ほど進化可能性が低いかもしれない2017
- Author(s)
  Naoki Irie
- Organizer
  生命の起源および進化学会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] In search for a general law of animal embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  he 12th International Workshop on Advanced Genomics [12AGW]
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Possible constraints on phenotypic evolvability of vertebrates2016
- Author(s)
  Naoki Irie
- Organizer
  The 1st B10K meeting
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] Why are vertebrates’ organogenesis stages evolutionarily conservative?2016
- Author(s)
  Naoki Irie
- Organizer
  Hot Spring Harbor Symposium
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] What makes vertebrate embryos to follow the hourglass-like conservation?2016
- Author(s)
  Naoki Irie
- Organizer
  Joint meeting of the 22nd International Congress of Zoology and the 87th meeting of Zoologial Society of Japa
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] Potential developmental constraints on vertebrate bodyplan evolution2016
- Author(s)
  Naoki Irie
- Organizer
  EuroEvoDevo
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 動物胚が発生と進化の法則性、砂時計モデルに従うのはなぜか？2015
- Author(s)
  入江直樹
- Organizer
  第53回　生物物理学会年会
- Place of Presentation
  金沢大学・金沢
- Year and Date
  2015-09-14
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 大進化スケールにおける発生進化の法則性と定量的検証る可能性2015
- Author(s)
  入江直樹
- Organizer
  平成27年度 JSBi生命システム理論研究会
- Place of Presentation
  東京医科歯科大学・東京
- Year and Date
  2015-11-27
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 発生システムが動物ボディプラン進化を制約している可能性2015
- Author(s)
  入江直樹
- Organizer
  BMB2015(第38回日本分子生物学会年会、第88回日本生化学会大会合同大会)
- Place of Presentation
  神戸国際会議場・神戸
- Year and Date
  2015-12-03
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 祖先の姿を反映した発生期?EvoDevの古典問題と生命情報解析2014
- Author(s)
  入江　直樹
- Organizer
  遺伝研研究集会「ゲノム編集時代の分子進化」
- Place of Presentation
  三島市
- Year and Date
  2014-06-28
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 動物進化と個体発生の統合的理解に向けて2014
- Author(s)
  入江　直樹
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  横浜市
- Year and Date
  2014-11-26
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Easily changed early embryogenesis?2014
- Author(s)
  Naoki Irie
- Organizer
  X Meeting of the Spanish Society for Developmental Biology
- Place of Presentation
  Seville, Spain
- Year and Date
  2014-10-14
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Evolutionary meanings of fish-like stages in our embryogenesis.2014
- Author(s)
  Naoki Irie
- Organizer
  Japan-Chile JSPS symposium "Genomic and epigenomic insights into vertebrate regeneration, development and evolution - Xenopus and fish as models"
- Place of Presentation
  Santiago, Chile
- Year and Date
  2014-11-04
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 大規模トランスクリプトームから挑む進化発生学の古典問題2014
- Author(s)
  入江　直樹
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜市
- Year and Date
  2014-09-16
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Remaining questions of the developmental hourglass model2014
- Author(s)
  Naoki Irie
- Organizer
  The fifth meeting of the European Society for Evolutionary Developmental Biology (EED)
- Place of Presentation
  Vienna, Austria
- Year and Date
  2014-07-24
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Is the hourglass model, unified theory of Evo-Devo?2014
- Author(s)
  Naoki Irie
- Organizer
  OIST Winter Course "Evolution of Complex Systems"
- Place of Presentation
  Ｏｋｉｎａｗａ，　Ｊａｐａｎ
- Year and Date
  2014-12-12
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Vertebrate phylotypic period as a source of basic body plan.2013
- Author(s)
  Naoki Irie
- Organizer
  International Society of Developmental Biology Conference 2013
- Place of Presentation
  Cancun, Mexico
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] カメゲノムと脊椎動物ボディプラン2013
- Author(s)
  入江直樹
- Organizer
  第60回　日本実験動物学会総会
- Place of Presentation
  筑波 (茨城県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Turtle also follows the general formulation of Embryonic Evolution.2013
- Author(s)
  Naoki Irie
- Organizer
  ICG-8
- Place of Presentation
  ShenZhen, China
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] カメも従う動物発生進化の法則性？2013
- Author(s)
  入江直樹
- Organizer
  第３６回　分子生物学会 Workshop 3AW14
- Place of Presentation
  神戸 (兵庫県)
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] ネッタイツメガエル胚発生期の包括的遺伝子発現データ2013
- Author(s)
  入江直樹
- Organizer
  第84回　動物学会
- Place of Presentation
  岡山 (岡山県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Vertebrates' basic body plan embedded in the waist of hourglass. Bottleneck in evolution and development2013
- Author(s)
  Naoki Irie
- Organizer
  15th Annual meeting of the Society of Evolutionary Studies, Japan
- Place of Presentation
  筑波 (茨城県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Relationship between Ontogeny and Phylogeny of vertebrates.2013
- Author(s)
  Naoki Irie
- Organizer
  German-Japan Colloquium -Cellular Biochemistry Shaping Animals-
- Place of Presentation
  Germany, KIT
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] What the Hourglass tells us about Vertebrate Development and Evolution2013
- Author(s)
  Naoki Irie
- Organizer
  CDB Symposium 2013
- Place of Presentation
  神戸、理化学研究所
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Toward integration of ontogeny and phylogeny of vertebrates2013
- Author(s)
  Naoki Irie
- Organizer
  （独）日本学術振興会本研究連絡センター主催コロキウム　第9回日独コロキウム「細胞生化学」
- Place of Presentation
  Karlsruhe Institute of Technology(KIT), Karlsruhe, Germany
- Year and Date
  2013-01-28
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化と発生の関係性をさぐるべく、de novo カメゲノム2013
- Author(s)
  入江直樹
- Organizer
  NGS現場の会　第３回大会
- Place of Presentation
  神戸　(兵庫県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] What the Hourglass tells us about Vertebrate Development and Evolution2013
- Author(s)
  Naoki Irie
- Organizer
  CDB Symposium 2013 “The Making of a Vertebrate”
- Place of Presentation
  RIKEN, Center for Developmental Biology, 兵庫県神戸市
- Year and Date
  2013-03-04
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化の歴史に縛られたカメのボディプラン2013
- Author(s)
  入江　直樹
- Organizer
  生命情報科学若手の会第4回研究会
- Place of Presentation
  岡崎コンファレンスセンター、愛知県岡崎市
- Year and Date
  2013-03-01
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Flexibility in early developmental system? Quantification of evolutionary distance between embryos2013
- Author(s)
  Naoki Irie
- Organizer
  First Annual Winter q-bio Meeting
- Place of Presentation
  Hilton Hawaiian Village Waikiki Beach Resort, Honolulu, Hawaii,USA
- Year and Date
  2013-02-18
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Turtle Genomes : Body Plan Evolution from Vertebrate Phylotype2013
- Author(s)
  Naoki Irie
- Organizer
  Plant and Animal Genome Asia 2013-The international conference on the status of plant and animal genome research-　（Work shop: de novo genome projects of exotic creatures）
- Place of Presentation
  Grand Copthorne Waterfront Hotel, Singapore
- Year and Date
  2013-03-17
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Turtle Genomes: Body Plan Evolution from Vertebrate Phylotype2013
- Author(s)
  Naoki Irie
- Organizer
  Plant and Animal Genome Conference Asia 2013
- Place of Presentation
  Singapore, Grand Copthorn Hotel
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] カメの起源：胚発生、ゲノム、そして化石の示す進化シナリオ2012
- Author(s)
  ○倉谷　滋、入江　直樹、工樂　樹洋、長島　寛、Juan Pascual Anaya, 川嶋-大宅芳枝、平沢達矢
- Organizer
  日本進化学会第14回東京大会
- Place of Presentation
  首都大学東京　東京都八王子市
- Year and Date
  2012-08-21
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Re-formulating the Relationship Between Evolution and Development2012
- Author(s)
  Naoki Irie
- Organizer
  The 7th International Conference on Genomics Bio-IT APAC2012
- Place of Presentation
  Kowloon Shangri-La, Hong Kong, China
- Year and Date
  2012-11-28
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 個体発生と系統発生が示す新たな謎2012
- Author(s)
  入江　直樹
- Organizer
  第24回高遠シンポジウム－生命の制御系の進化を探る-
- Place of Presentation
  高遠さくらホテル　長野県伊那市
- Year and Date
  2012-08-23
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Hopehul monster tackles the developmental hourglass model2012
- Author(s)
  Naoki Irie
- Organizer
  Asia-Pacific Developmental Biology Conference 2012 Satellite Meeting on Evo-Devo
- Place of Presentation
  Taipei Innovation City Convention Center, Taipei, Taiwan.
- Year and Date
  2012-10-05
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化と発生の関係性再定式化にむけて2012
- Author(s)
  入江　直樹
- Organizer
  Genomic Sciences Research Complex (GSC) 七夕ミーティング2012
- Place of Presentation
  理化学研究所　横浜研究所、神奈川県横浜市
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Hopeful monster tackles the developmental hourglass model.2012
- Author(s)
  Naoki Irie
- Organizer
  Asia Pacific Developmental Biology Conference, EvoDevo satellite Meeting
- Place of Presentation
  Taiwan, Taipei
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Experimental verification of the developmental hourglass model2012
- Author(s)
  Naoki Irie
- Organizer
  The fourth meeting of the European Society for Evolutionary Developmental Biology (EED)
- Place of Presentation
  Faculty of Sciences of the University of Lisbon, Lisbon, Portugal
- Year and Date
  2012-07-10
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 新規脊椎動物ゲノム道程とRNAseqによる遺伝子発現プロファイル比較2012
- Author(s)
  入江　直樹
- Organizer
  CiRA Genome epigenome and Bioinformatics Seminar Series presents 「次世代シーケンシングが切り開く医学研究と展望」
- Place of Presentation
  京都大学iPS細胞研究所　京都府京都市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化と発生の統合的理解を目指す2012
- Author(s)
  入江　直樹
- Organizer
  NGS現場の会　第２回研究会
- Place of Presentation
  ホテル阪急エキスポパーク　大阪府吹田市
- Year and Date
  2012-05-24
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] How evolution and Animal Development are Related to each other?2012
- Author(s)
  Z., Wang, A., Juan-Pascual, A., Zadissa, W., Li, Y., Niimura, Joint Turtles genome consortium middle authors, S., Kuratani, Y., Ye, B., Aken, G., Zhang, ○N., Irie
- Organizer
  第35回日本分子生物学会年会　ワークショップ
- Place of Presentation
  福岡国際会議場、福岡県福岡市
- Year and Date
  2012-12-11
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 大量情報解析技術で挑む進化発生学の古典問題2012
- Author(s)
  入江　直樹
- Organizer
  NAIST植物グローバル教育プロジェクト　平成24年度ワークショップ「実験生物学と情報学的アプローチのシームレスな融合
- Place of Presentation
  奈良先端科学技術大学院大学　奈良県生駒市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Re-formulating the Relationship Between Evolution and Development2012
- Author(s)
  Naoki Irie
- Organizer
  The 7th International Conference on Genomics & Bio-IT APAC 2012
- Place of Presentation
  HongKong, Kawoloon Shangrila hotel
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Molecular identification of the vertebrate phylotypic stage, 20th CDB Meeting2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Molecular Bases for Evolution of Complex Traits
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 観念形態学の古典問題に定量化で挑む2011
- Author(s)
  入江直樹
- Organizer
  定量生物学の会第四回年回2011年
- Place of Presentation
  名古屋市(招待講演)
- Year and Date
  2011-01-09
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 動物進化と発生にまつわる謎に挑む2011
- Author(s)
  入江直樹
- Organizer
  2011生命情報若手の会第3回研究会
- Place of Presentation
  岡崎市
- Year and Date
  2011-10-15
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Molecular identification of vertebrate phylotypic stage and epigenetic insights of vertebrate embryogenesis, CDB Symposium 20112011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Epigenetic Landscape in Development and Disease
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプ仮説検証と発生学的構造特性の示唆2011
- Author(s)
  入江直樹
- Organizer
  生命情報若手の会・沖縄セミナー
- Place of Presentation
  沖縄市
- Year and Date
  2011-09-04
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] The Developmental hourglass model and phylotype of the vertebrates.2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Joint meeting of the GFE and JSDB
- Place of Presentation
  Dresden, Germany
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 非モデル脊椎動物のgenome/transcriptome de novo assembly2011
- Author(s)
  入江直樹
- Organizer
  次世代シークエンサ現場の会第一回研究会
- Place of Presentation
  熱海市
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] The Developmental hourglass model and phylotype of the vertebrates2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Joint meeting of the GFE and JSDB
- Place of Presentation
  Dresden, Germany
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] ヘッケルの反復説から進化と発生の関係性解明は進んだか2011
- Author(s)
  入江直樹
- Organizer
  京都大学生体構造医学講座セミナー
- Place of Presentation
  京都市(招待講演)
- Year and Date
  2011-01-19
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 脊椎動物胚でみつかった進化的に保守的な発生段階2011
- Author(s)
  入江直樹
- Organizer
  神戸大学バイオシグナル研究センター重点研究チーム学術講演会
- Place of Presentation
  神戸市(招待講演)
- Year and Date
  2011-05-24
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Molecular identification of the vertebrate phylotypic stage.2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  20th CDB Meeting "Molecular Bases for Evolution of Complex Traits"
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Haeckel's recapitulation theory? Or The developmental hourglass?2011
- Author(s)
  Naoki Irie
- Organizer
  The 1542th Biological Symposium
- Place of Presentation
  三島市(招待講演)
- Year and Date
  2011-11-21
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Transcriptome similarity reveals developmental basis for vertebrate body plan2011
- Author(s)
  Naoki Irie
- Organizer
  SMBE (Society for Molecular Biology and Evolution) 2011
- Place of Presentation
  京都市(招待講演)
- Year and Date
  2011-07-30
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Evolutionarily inflexible developmental programs?-Transcriptome similarity supports vertebrate phylotypic hypothesis-2011
- Author(s)
  Naoki Irie
- Organizer
  Young Researchers Conference on Evolutionary Genomics
- Place of Presentation
  東京都(招待講演)
- Year and Date
  2011-08-01
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] The developmental hourglass model and early divergence of vertebrate embryos2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  44^<th> Annual Meeting of the Japanese Society of Developmental Biology(第44回日本発生生物学会年会)
- Place of Presentation
  沖縄市(招待講演)
- Year and Date
  2011-05-21
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 発生砂時計モデルの証明と脊椎動物EvoDevo最前線2011
- Author(s)
  入江直樹
- Organizer
  大阪大学微生物病研究所部員会主催BRIDGEセミナー
- Place of Presentation
  吹田市(招待講演)
- Year and Date
  2011-06-17
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Molecular identification of vertebrate phylotypic stage and epigenetic insights of vertebrate embryogenesis2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  CDB Symposium 2011 "Epigenetic Landscape in Development and Disease"
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Ontogeny and phylogeny of the vertebrates : testing the developmental hourglass model by transcriptome dynamycs comparisons.2010
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Joint meeting of the SFBD and JSDB
- Place of Presentation
  Paris
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプは原形論的な幻想か?2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  日本進化学会第12回大会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプは原形論的な幻想か?2010
- Author(s)
  入江直樹, 倉谷滋
- Organizer
  日本進化学会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Testing phylotype hypothesis and structural insights of vertebrate embryogenesis2010
- Author(s)
  N.Irie
- Organizer
  日本分子生物学会
- Place of Presentation
  神戸
- Year and Date
  2010-12-07
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Testing phylotype hypothesis and structural insights of vertebrate embryogenesis2010
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  BMB 2010
- Place of Presentation
  神戸
- Year and Date
  2010-12-07
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] カメの甲の新規形態パターンをもたらした発生機構の解明にむけて公開シンポジウム「複合適応形質の進化」2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  領域会議
- Place of Presentation
  東京
- Year and Date
  2010-09-17
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] カメの甲の新規形態パターンをもたらした発生機構の解明にむけて2010
- Author(s)
  入江直樹, 倉谷滋
- Organizer
  公開シンポジウム「複合適応形質の進化」
- Place of Presentation
  東京
- Year and Date
  2010-09-17
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプ仮説検証と発生学的構造特性の示唆2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  生命情報科学若手の会第2回研究会
- Place of Presentation
  三島
- Year and Date
  2010-10-09
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Testing phylotype hypothesis and structural insights of vertebrate embryogenesis.2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  BMB 2010(1T7-8 & 1P-1139)
- Place of Presentation
  神戸
- Year and Date
  2010-12-07
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Is earlier developmental stage more conserved than later stages?～analysis of zebrafish transcriptome during embryogenesis～2009
- Author(s)
  入江直樹
- Organizer
  第42回発生生物学会
- Place of Presentation
  新潟市
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 大規模トランスクリプトームから挑む進化発生学の古典問題
- Author(s)
  入江直樹
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜バイオ大学（滋賀県長浜市）
- Year and Date
  2014-09-17 – 2014-09-19
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Turtle also follows the general formulation of Embryonic Evolution.
- Author(s)
  Naoki Irie
- Organizer
  The 8th International Conference on Genomics in China (ICG-8)
- Place of Presentation
  ShenZhen, China.
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Evolutionary origin of the turtle body plan from genomic, anatomical and developmental perspectives.
- Author(s)
  Shigeru Kuratani, Hiroshi Nagashima, Naoki Irie.
- Organizer
  International Society of Developmental Biologists 17th International Congress of Developmental Biology
- Place of Presentation
  Cuncun Center Conventions & Exhibitions, Cancun, Mexico
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Easily changed early embryogenesis?
- Author(s)
  Naoki Irie
- Organizer
  X Meeting of the Spanish Society for Developmental Biology 2014
- Place of Presentation
  マドリッド（スペイン）
- Year and Date
  2014-10-13 – 2014-10-15
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] What does it take to be a turtle?-from embryology to genomics.
- Author(s)
  Shigeru Kuratani, Hiroshi Nagashima, Naoki Irie.
- Organizer
  10th International Congress of vertebrate Morphology
- Place of Presentation
  Fira Palace Hotel, Barcelona, Spain
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Flexibility in early animal developmental system.
- Author(s)
  Naoki Irie
- Organizer
  The 2nd International Workshop for Quantitative Biology
- Place of Presentation
  Osaka, Japan
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] カメゲノムと脊椎動物ボディプラン
- Author(s)
  入江　直樹
- Organizer
  第60回日本実験動物学会総会
- Place of Presentation
  つくば国際会議場　茨城県つくば市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] In search for more ancestral embryos
- Author(s)
  Naoki Irie
- Organizer
  CDB Symposium 2015
- Place of Presentation
  理化学研究所多細胞システム形成研究センター（兵庫県神戸市）
- Year and Date
  2015-03-13 – 2015-03-15
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Vertebrates' basic body plan embedded in the waist of hourglass
- Author(s)
  Naoki irie
- Organizer
  Vertebrates' basic body plan embedded in the waist of hourglass
- Place of Presentation
  筑波大学、茨城県つくば市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Remaining questions of the developmental hourglass model
- Author(s)
  Naoki Irie
- Organizer
  Euro EvoDevo 2014
- Place of Presentation
  ウィーン（オーストリア）
- Year and Date
  2014-07-22 – 2014-07-25
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] ネッタイツメガエル胚発生期の包括的遺伝子発現データ
- Author(s)
  入江　直樹
- Organizer
  日本動物学会　第84回大会
- Place of Presentation
  岡山大学津島キャンパス、岡山県岡山市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Vertebrate phylotypic period as a source of basic body plan.
- Author(s)
  Naoki Irie, Guogie Zhang, Shigeru Kuratani
- Organizer
  International Society of Developmental Biologists 17th International Congress of Developmental Biology
- Place of Presentation
  Cuncun Center Conventions & Exhibitions, Cancun, Mexico
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 動物進化と個体発生の統合的理解に向けて
- Author(s)
  入江直樹
- Organizer
  第37回　日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜（神奈川県横浜市）
- Year and Date
  2014-11-25 – 2014-11-27
- Data Source
  KAKENHI-PROJECT-24570243

1. KURATANI Shigeru (00178089)

# of Collaborated Projects: 2 results

# of Collaborated Products: 16 results
2. PASCUAL-ANAYA-JUAN (30594098)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
3. 上坂将弘 (20756499)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
4. 深津武馬 (00357881)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 古澤力 (00372631)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
6. 金子邦彦 (30177513)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 重信秀治 (30399555)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 長谷部光泰 (40237996)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 三浦徹

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
10. 上村想太郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Irie Naoki 入江 直樹

IRIE Naoki 入江 直樹

Research Projects

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Co-Researchers

Bodyplan analysis and developmental re-definition of animal phylum.Principal Investigator

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胎児期に移入する母由来細胞集団の解明とその生物学的意義の探求Principal Investigator

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Testing possible contribution of maternal microchimeric cells to biliary atresiaPrincipal Investigator

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Measuring molecular fluctuation of chordate developmental system and its contribution toward evolutionary conservationPrincipal Investigator

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Evolutionary theory for constrained and directional diversities

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In search for a general tendency of chordate embryonic evolution by analyzing genetic expression patterns during developmentPrincipal Investigator

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Study toward evolutionary formulation of vertebrate embryogenesisPrincipal Investigator

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Changes in developmental program in the acquisition of novel morphological patterns of the turtle shell

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Identification of vertebrate phylotypic stage by transcriptome analysisPrincipal Investigator

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[Book] 胎児期に刻まれた進化の痕跡2015

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[Book] 細胞工学 2014年 １月号 特集号2014

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[Book] 胚発生のロバストネスは進化にバイアスをかけているか？2014

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[Book] New Principles in Developmental Processes2014

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[Book] 物理科学月刊誌 パリティ 2013年１月号 特集：物理科学、この１年 「進化と発生の関係性定式化にみる生物のやわらかさ」2013

Irie Naoki 入江直樹

IRIE Naoki 入江直樹

[Book] 細胞工学　2014年１月号　特集号2014

[Book] 物理科学月刊誌　パリティ 2013年１月号特集：物理科学、この１年「進化と発生の関係性定式化にみる生物のやわらかさ」2013

[Book] 遺伝　2013年３月号「脊椎動物ファイロタイプとボディプラン進化」2013