Inoue Jun 井上潤

Researcher Number	10596779
Affiliation *help	2018 : 沖縄科学技術大学院大学, マリンゲノミックスユニット, 研究員 2016 – 2017 : 沖縄科学技術大学院大学, 数理生物学ユニット, 研究員 2015 : 沖縄科学技術大学院大学, Mathematical Biology, スタッフサイエンティスト 2015 : 沖縄科学技術大学院大学, Mathematical Biology, 研究員 2013 – 2014 : 沖縄科学技術大学院大学, 数理生物学ユニット, 研究員 2012 : 東京大学, 大気海洋研究所, 研究員
Review Section/Research Field	Principal Investigator Basic Section 45030:Biodiversity and systematics-related / Evolutionary biology / Biodiversity/Systematics
Keywords	Principal Investigator 真骨魚類 / オタマボヤ / 分子系統 / 分子系統解析 / 解析パイプライン / シンテニー / 比較ゲノム / 真骨類 / 脊索動物 / ゲノム進化 … More

核ゲノム解析による進化速度の速い種の系統的位置決定：尾索動物オタマボヤ類を例にPrincipal InvestigatorOngoing
- Principal Investigator
  
  井上潤
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 45030:Biodiversity and systematics-related
- Research Institution
  Okinawa Institute of Science and Technology Graduate University
脊椎動物の全ゲノム比較解析を可能にする統合オーソログ判定パイプラインの構築Principal InvestigatorOngoing
- Principal Investigator
  
  井上潤
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  Okinawa Institute of Science and Technology Graduate University
Resolving ray-finned fish phylogeny with genomic data: Developing an analysis pipeline for identification of homologous genesPrincipal Investigator
- Principal Investigator
  
  Inoue Jun
- Project Period (FY)
  2012 – 2015
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Biodiversity/Systematics
- Research Institution
  Okinawa Institute of Science and Technology Graduate University
  The University of Tokyo

All 2017 2015 2014 2013 2012

All Journal Article Presentation

[Journal Article] The chordate ancestor possessed a single copy of the Brachyury gene for notochord aquisition2017
- Author(s)
  Inoue, J., Yasuoka, Y., Takahashi, H. Satoh, N.
- Journal Title
  
  Zoological Letters
  
  Volume : 3 Pages : 4
- DOI
  10.1186/s40851-017-0064-9
- PMID
  info:pmid/28344820
- Year and Date
  2017-03-23
- Language
  English
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-16H04824, KAKENHI-PROJECT-26650087, KAKENHI-PROJECT-15K07172, KAKENHI-PROJECT-15K07174, KAKENHI-PROJECT-16K21559
[Journal Article] Rapid genome reshaping by multiple-gene loss after whole-genome duplication in teleost fish suggested by mathematical modeling.2015
- Author(s)
  Inoue, J., Sato, Y., Sinclair, R., Tsukamoto, T., and Nishida, M.
- Journal Title
  
  Proceedings of the National Academy of Sciences of the United States of America
  
  Volume : 112 Pages : 14918-14923
- DOI
  10.1073/pnas.1507669112
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-15K07172, KAKENHI-PROJECT-24770070
[Presentation] Identification of phylogenetic marker gene considering whole genome duplication and species tree.2015
- Author(s)
  Inoue J., Sato, Y., Sinclair, R., Nishida, M.
- Organizer
  Introduction to the analysis of molecular evolution in the genomic era
- Place of Presentation
  Fudan University, Shanghai
- Year and Date
  2015-11-06
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PROJECT-15K07172
[Presentation] 全ゲノム重複と種の系統樹を考慮した系統解析マーカ遺伝子の選定．2015
- Author(s)
  井上潤，佐藤行人，シンクレアロバート，塚本勝巳，西田睦．
- Organizer
  日本進化学会年会
- Place of Presentation
  中央大学，東京．
- Year and Date
  2015-08-20
- Invited
- Data Source
  KAKENHI-PROJECT-15K07172
[Presentation] Identification of phylogenetic marker gene considering whole genome duplication and species tree2015
- Author(s)
  Inoue J., Sato, Y., Sinclair, R., Nishida, M.
- Organizer
  Introduction to the analysis of molecular evolution in the genomic era.
- Place of Presentation
  Fudan University, Shanghai
- Year and Date
  2015-11-06
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PROJECT-24770070
[Presentation] 全ゲノム重複と種の系統樹を考慮した系統解析マーカ遺伝子の選定2015
- Author(s)
  井上潤，佐藤行人，シンクレアロバート，塚本勝巳，西田睦
- Organizer
  日本進化学会年会
- Place of Presentation
  中央大学，東京
- Year and Date
  2015-08-20
- Invited
- Data Source
  KAKENHI-PROJECT-24770070
[Presentation] Selecting molecular markers from transcriptome data for fish phylogenetics.2014
- Author(s)
  Inoue J., Sato, Y., Sinclair, R., Nishida, M.
- Organizer
  Workshop on Methods for Biodiversity Research,
- Place of Presentation
  Fudan Univ., Shanghai
- Data Source
  KAKENHI-PROJECT-24770070
[Presentation] 脊椎動物 3 億年のゲノム進化：ゲノム重複に由来する遺伝子の保持と進化に寄与した自然選択項の検出．2013
- Author(s)
  井上潤，佐藤行人，西田睦．
- Organizer
  日本進化学会
- Place of Presentation
  筑波大学
- Data Source
  KAKENHI-PROJECT-24770070
[Presentation] 真骨魚類ゲノムの進化特性: トランスクリプトーム相同遺伝子データベースの構築．2012
- Author(s)
  井上潤
- Organizer
  日本進化学会年会
- Place of Presentation
  首都大学東京
- Data Source
  KAKENHI-PROJECT-24770070

1. NISHIDA Mutsumi (90136896)

# of Collaborated Projects : 1results

# of Collaborated Products : 5results
2. TSUKAMOTO Katsumi (10090474)

# of Collaborated Projects : 1results

# of Collaborated Products : 2results
3. SINCLAIR Robert (50423744)

# of Collaborated Projects : 1results

# of Collaborated Products : 4results
4. SATO Yukuto (20566418)

# of Collaborated Projects : 1results

# of Collaborated Products : 5results
5. 西野敦雄 (50343116)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
6. 佐藤矩行

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
7. 安岡有理

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
8. 高橋弘樹

# of Collaborated Projects : 0results

# of Collaborated Products : 1results

Inoue Jun 井上 潤

Research Projects

Research Products

Co-Researchers

核ゲノム解析による進化速度の速い種の系統的位置決定：尾索動物オタマボヤ類を例にPrincipal InvestigatorOngoing

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

脊椎動物の全ゲノム比較解析を可能にする統合オーソログ判定パイプラインの構築Principal InvestigatorOngoing

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Resolving ray-finned fish phylogeny with genomic data: Developing an analysis pipeline for identification of homologous genesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] The chordate ancestor possessed a single copy of the Brachyury gene for notochord aquisition2017

Author(s)

Journal Title

DOI

PMID

Year and Date

Language

Data Source

[Journal Article] Rapid genome reshaping by multiple-gene loss after whole-genome duplication in teleost fish suggested by mathematical modeling.2015

Author(s)

Journal Title

DOI

Data Source

[Presentation] Identification of phylogenetic marker gene considering whole genome duplication and species tree.2015

Author(s)

Organizer

Place of Presentation

Year and Date

Data Source

[Presentation] 全ゲノム重複と種の系統樹を考慮した系統解析マーカ遺伝子の選定．2015

Author(s)

Organizer

Place of Presentation

Year and Date

Data Source

[Presentation] Identification of phylogenetic marker gene considering whole genome duplication and species tree2015

Author(s)

Organizer

Place of Presentation

Year and Date

Data Source

[Presentation] 全ゲノム重複と種の系統樹を考慮した系統解析マーカ遺伝子の選定2015

Author(s)

Organizer

Place of Presentation

Year and Date

Data Source

[Presentation] Selecting molecular markers from transcriptome data for fish phylogenetics.2014

Author(s)

Organizer

Place of Presentation

Data Source

[Presentation] 脊椎動物 3 億年のゲノム進化：ゲノム重複に由来する遺伝子の保持と進化に寄与した自然選択項の検出．2013

Author(s)

Organizer

Place of Presentation

Data Source

[Presentation] 真骨魚類ゲノムの進化特性: トランスクリプトーム相同遺伝子データベースの構築．2012

Author(s)

Organizer

Place of Presentation

Data Source

Inoue Jun 井上潤