Nakaoka Shinji 中岡慎治

… Alternative Names

NAKAOKA shinji 中岡慎冶

中岡慎冶ナカオカシンジ

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Researcher Number	30512040
Other IDs	https://orcid.org/0000-0002-3277-9552
Affiliation (Current)	2023: 北海道大学, 先端生命科学研究院, 准教授
Affiliation (based on the past Project Information) *help	2019 – 2021: 北海道大学, 先端生命科学研究院, 准教授 2017 – 2019: 北海道大学, 先端生命科学研究院, 特任講師 2016 – 2018: 東京大学, 生産技術研究所, 派遣研究員 2016 – 2018: 東京大学, 生産技術研究所, 特任助教 2015: 東京大学, 大学院医学系研究科, 助教 2014 – 2015: 東京大学, 医学(系)研究科(研究院), 助教 2013: 独立行政法人理化学研究所, 統合生命医科学研究センター, 上級研究員
Review Section/Research Field	Principal Investigator Foundations of mathematics/Applied mathematics / Medium-sized Section 62:Applied informatics and related fields / Constructive Systems Biology / Computational science Except Principal Investigator Medium-sized Section 58:Society medicine, nursing, and related fields / Basic Section 53020:Cardiology-related / Medium-sized Section 39:Agricultural and environmental biology and related fields / Basic Section 49060:Virology-related / Bacteriology (including mycology) / Mathematical informatics … More / Complex Systems Disease Theory / Social welfare and social work studies / Epidemiology and preventive medicine / Hygiene and public health / Mathematical Sciences in Search of New Cooperation Less
Keywords	Principal Investigator 数理モデル / 擬似時間再構成法 / オミクスデータ / 発症ロードマップ / データ駆動型数理モデル / エネルギーランドスケープ解析 / 再生医学 / 免疫学 / 数学基礎論 / 数理工学 … More / モデル化 / 生命医科学 / 応用数学 / 人工共培養系 / 複合オミクス解析 / 進化のダイナミクス / 人工培養系 / アトピー性皮膚炎 / 免疫系 / 確率シミュレーション / マルチスケール数理モデル … More Except Principal Investigator 危険因子 / 健康格差 / 疫学 / 数理モデル / 費用対効果分析 / 医療管理学 / ELSI / 数理科学 / 医療経済評価 / 感染症疫学モデル / 新型コロナウイルス感染症 / IoT / ICT / パーソナルヘルスレコード / 心血管病 / 機械学習モデル / デジタルヘルス / パーソナル・ヘルス・レコード / 腸内細菌叢 / ミツバチヘギイタダニ / ノゼマ病 / 蜂病 / 腸内細菌 / 環境 / ハナバチ / 土地利用パターン / 病原体 / 農薬 / ミツバチ / HIV / ウイルス感染症 / エイズウイルス / ウイルス感染 / マルチオミクス / システムウイルス学 / ウイルス学 / ゲノム / 進化 / 腸管出血性大腸菌 / 原生生物 / 共進化 / 大腸菌 / ファージ / 志賀毒素 / 数理的基盤 / 動的ネットワークバイオマーカー / 内分泌療法 / 個別化医療 / 数理モデリング / 生命病態システム / バイオマーカー / 疾患予測 / 状態空間モデル / 分岐現象 / 機械学習 / 時系列解析 / 状態遷移モデル / 制御ネットワーク / 多階層ネットワーク / 社会福祉計画 / 保健人材管理 / 社会医学 / 社会福祉関係 / 人口学 / 高齢化 / Modeling / Aging / Simulation / Projection / Matrix models / Demography / 人口予想 / シミュレーション / 高齢化社会 / 保健医療システム / 地域別健康格差 / 将来予測 / 都道府県別 / 疾病・危険因子 / データビジュアライゼーション / 健康寿命 / 疾病負荷 / 政策評価 / ベイズ推計 / 平均余命 / 死因分析 / 疾病負担（burden of disease） / 小地域分析 / 死因別死亡 / 要因 / 公衆衛生 / 疾病負担 / ウイルス感染実験 / 構造化個体群モデル / 融合研究 / データ解析 / 偏微分方程式 / 多階層数理モデル / マルチスケールモデル / 定量的データ解析 / 数理モデル型アプローチ Less

PHRを活用した機械学習モデルによる心血管病の重症化予防を目指した研究
- Principal Investigator
  
  横田卓
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 53020:Cardiology-related
- Research Institution
  Hokkaido University
Development of an integrated model for estimating emerging infectious diseases and a method for allocating medical resources by integrating mathematical science and healthcare administration
- Principal Investigator
  
  佐藤大介
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 58:Society medicine, nursing, and related fields
- Research Institution
  Chiba University
Construction of state transition model based on energy landscapePrincipal Investigator
- Principal Investigator
  
  中岡慎治
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 62:Applied informatics and related fields
- Research Institution
  Hokkaido University
Emerging infectious diseases of bees in Japan: integrated risk assessment for conservation
- Principal Investigator
  
  坂本佳子
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 39:Agricultural and environmental biology and related fields
- Research Institution
  National Institute for Environmental Studies
Investigation of virus infection dynamics through comprehensive multi-omics approach
- Principal Investigator
  
  Sato Kei
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 49060:Virology-related
- Research Institution
  The University of Tokyo
Comprehensive Study of Disease Burden and Its Utilization by Prefecture in Japan
- Principal Investigator
  
  SHIBUYA kenji
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Epidemiology and preventive medicine
- Research Institution
  The University of Tokyo
A quantitative model of new strategies for Japan's hyper-aging society
- Principal Investigator
  
  GILMOUR Stuart
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Social welfare and social work studies
- Research Institution
  St. Luke's International University
  The University of Tokyo
Analysis of multi-scale mathematical models with inter-hierarchical feedback effects and their applications for diseasePrincipal Investigator
- Principal Investigator
  
  Nakaoka Shinji
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Foundations of mathematics/Applied mathematics
- Research Institution
  Hokkaido University
  The University of Tokyo
Elucidate latent rules in disruption of biological system
- Principal Investigator
  
  Kawakami Eiryo
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Complex Systems Disease Theory
- Research Institution
  Institute of Physical and Chemical Research
mechanism of diversification of shiga toxin-encoding phage, from the ecological aspect
- Principal Investigator
  
  Yoshitoshi Ogura
- Project Period (FY)
  2016 – 2017
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Bacteriology (including mycology)
- Research Institution
  Kyushu University
Theory for effective antiviral strategy based on multiscale mathematical modeling
- Principal Investigator
  
  Iwami Shingo
- Project Period (FY)
  2015 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Mathematical Sciences in Search of New Cooperation
- Research Institution
  Kyushu University
Experimental evolution of Saccharomyces cerevisiaePrincipal Investigator
- Principal Investigator
  
  Nakaoka Shinji
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Constructive Systems Biology
- Research Institution
  The University of Tokyo
Establishing Theoretical Foundations for Mathematical Modeling of Pathological Biosystems and its Applications to Personalized Medicine
- Principal Investigator
  
  AIHARA Kazuyuki
- Project Period (FY)
  2015 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Mathematical informatics
- Research Institution
  The University of Tokyo
Multiscale modeling and simulation study for immune inflammatory response at the skin tissuePrincipal Investigator
- Principal Investigator
  
  Nakaoka Shinji
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Foundations of mathematics/Applied mathematics
  Computational science
- Research Institution
  The University of Tokyo
  Institute of Physical and Chemical Research
A comprehensive assessment of the burden of disease in Japan
- Principal Investigator
  
  Shibuya Kenji
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Hygiene and public health
- Research Institution
  The University of Tokyo

All 2022 2021 2020 2019 2018 2017 2016 2015 2014 2013

All Journal Article Presentation Book

[Book] Exploring similarity between embedding dimension of time-series data and flows of an ecological population model2021
- Author(s)
  Daiki Kumakura and Shinji Nakaoka
- Total Pages
  10
- Publisher
  Springer
- Data Source
  KAKENHI-PROJECT-21K19813
[Book] 'Integrated population biology and modeling' (eds A.S. Rao C.R. Rao), pp.93-1302018
- Author(s)
  S. Nakaoka
- Total Pages
  633
- Publisher
  North Holland
- ISBN
  9780444640727
- Data Source
  KAKENHI-PROJECT-15H05707
[Book] 応用数理ハンドブック (感染症と免疫の数理)2013
- Author(s)
  稲葉寿、西浦博、岩見真吾、中岡慎治
- Total Pages
  704
- Publisher
  朝倉書店
- Data Source
  KAKENHI-PROJECT-25871132
[Journal Article] Dynamic Associations of Milk Components With the Infant Gut Microbiome and Fecal Metabolites in a Mother-Infant Model by Microbiome, NMR Metabolomic, and Time-Series Clustering Analyses2022
- Author(s)
  Komatsu Yosuke、Kumakura Daiki、Seto Namiko、Izumi Hirohisa、Takeda Yasuhiro、Ohnishi Yuki、Nakaoka Shinji、Aizawa Tomoyasu
- Journal Title
  
  Frontiers in Nutrition
  
  Volume: 8
- DOI
  10.3389/fnut.2021.813690
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K19813
[Journal Article] Chemical-Mediated Microbial Interactions Can Reduce the Effectiveness of Time-Series-Based Inference of Ecological Interaction Networks2022
- Author(s)
  Suzuki Kenta、Abe Masato S.、Kumakura Daiki、Nakaoka Shinji、Fujiwara Fuki、Miyamoto Hirokuni、Nakaguma Teruno、Okada Mashiro、Sakurai Kengo、Shimizu Shohei、Iwata Hiroyoshi、Masuya Hiroshi、Nihei Naoto、Ichihashi Yasunori
- Journal Title
  
  International Journal of Environmental Research and Public Health
  
  Volume: 19 Issue: 3 Pages: 1228-1228
- DOI
  10.3390/ijerph19031228
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K06820, KAKENHI-PROJECT-20K11708, KAKENHI-PROJECT-21K19813
[Journal Article] A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS-CoV-22021
- Author(s)
  K.S. Kim, K. Ejima, S. Iwanami, Y. Fujita, H. Ohashi, Y. Koizumi, Y. Asai, S. Nakaoka, K. Watashi, K. Aihara, R.N. Thompson, R. Ke, A.S. Perelson and S. Iwami.
- Journal Title
  
  PLOS Biology
  
  Volume: 19 Issue: 3 Pages: 3001128-3001128
- DOI
  10.1371/journal.pbio.3001128
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-INTERNATIONAL-16K21723, KAKENHI-PROJECT-15H05707, KAKENHI-PUBLICLY-19H04839, KAKENHI-ORGANIZER-16H06429, KAKENHI-PROJECT-18H01139
[Journal Article] Endogenous retroviruses drive KRAB zinc-finger protein family expression for tumor suppression2020
- Author(s)
  Ito Jumpei、Kimura Izumi、Soper Andrew、Coudray Alexandre、Koyanagi Yoshio、Nakaoka Hirofumi、Inoue Ituro、Turelli Priscilla、Trono Didier、Sato Kei
- Journal Title
  
  Science Advances
  
  Volume: 6 Issue: 43 Pages: 3020-3020
- DOI
  10.1126/sciadv.abc3020
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K07318, KAKENHI-PROJECT-20K15767, KAKENHI-PROJECT-18KK0447, KAKENHI-INTERNATIONAL-16K21723, KAKENHI-PUBLICLY-19H04826, KAKENHI-PROJECT-18H02662, KAKENHI-PROJECT-19J01713, KAKENHI-PROJECT-19J20488, KAKENHI-ORGANIZER-16H06429
[Journal Article] Multiomics Investigation Revealing the Characteristics of HIV-1-Infected Cells In?Vivo2020
- Author(s)
  Aso Hirofumi、Nagaoka Shumpei、Kawakami Eiryo、Ito Jumpei、Islam Saiful、Tan Benjy Jek Yang、Nakaoka Shinji、Ashizaki Koichi、Shiroguchi Katsuyuki、Suzuki Yutaka、Satou Yorifumi、Koyanagi Yoshio、Sato Kei
- Journal Title
  
  Cell Reports
  
  Volume: 32 Issue: 2 Pages: 107887-107887
- DOI
  10.1016/j.celrep.2020.107887
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K15767, KAKENHI-PROJECT-18KK0447, KAKENHI-INTERNATIONAL-16K21723, KAKENHI-PLANNED-18H05411, KAKENHI-PUBLICLY-19H04826, KAKENHI-PROJECT-18H02662, KAKENHI-PROJECT-20H03724, KAKENHI-PROJECT-19J01713, KAKENHI-PROJECT-19J22802, KAKENHI-PROJECT-20J23299, KAKENHI-PROJECT-18KK0230, KAKENHI-PROJECT-16H06279, KAKENHI-ORGANIZER-16H06429
[Journal Article] Quantifying the antiviral effect of APOBEC3 on HIV-1 infection in humanized mouse model2020
- Author(s)
  Tatsuya Kurusu, Kwang Su Kim, Yoshiki Koizumi, Shinji Nakaoka, Keisuke Ejima, Naoko Misawa, Yoshio Koyanagi, Kei Sato, Shingo Iwami
- Journal Title
  
  Journal of Theoretical Biology
  
  Volume: 498 Pages: 110295-110295
- DOI
  10.1016/j.jtbi.2020.110295
- Peer Reviewed
- Data Source
  KAKENHI-INTERNATIONAL-16K21723, KAKENHI-PUBLICLY-19H04826, KAKENHI-PROJECT-18H02662, KAKENHI-PROJECT-18H01139
[Journal Article] Mathematical analysis of a transformed ODE from a PDE multiscale model of hepatitis C virus infection2019
- Author(s)
  Kitagawa K., Kuniya T., Nakaoka S., Asai Y., Watashi K. and Iwami S.
- Journal Title
  
  Bulletin of Mathematical Biology
  
  Volume: 81(5) Issue: 5 Pages: 1427-1441
- DOI
  10.1007/s11538-018-00564-y
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17KT0119, KAKENHI-PROJECT-18K17371, KAKENHI-INTERNATIONAL-16K21723, KAKENHI-ORGANIZER-16H06429, KAKENHI-PUBLICLY-17H05819, KAKENHI-PROJECT-16H04845, KAKENHI-PROJECT-18H01139, KAKENHI-PROJECT-15KT0107, KAKENHI-PROJECT-16K05265, KAKENHI-PROJECT-16K13777, KAKENHI-PROJECT-17H04085
[Journal Article] T-Cell mediated adaptive immunity and antibody-dependent enhancement in secondary dengue infection2019
- Author(s)
  Sasmal Sourav Kumar、Takeuchi Yasuhiro、Nakaoka Shinji
- Journal Title
  
  Journal of Theoretical Biology
  
  Volume: 470 Pages: 50-63
- DOI
  10.1016/j.jtbi.2019.03.010
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Journal Article] Calculation of final size for vector-transmitted epidemic model2019
- Author(s)
  Tsubouchi Yu、Takeuchi Yasuhiro、Nakaoka Shinji
- Journal Title
  
  Mathematical Biosciences and Engineering
  
  Volume: 16 Issue: 4 Pages: 2219-2232
- DOI
  10.3934/mbe.2019109
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265, KAKENHI-PROJECT-26400211
[Journal Article] Information and Statistical Analysis Pipeline for High-Throughput RNA Sequencing Data2019
- Author(s)
  Nakaoka Shinji、Matsuyama Keita
- Journal Title
  
  Methods in Molecular Biology
  
  Volume: 2109 Pages: 199-208
- DOI
  10.1007/7651_2019_245
- ISBN
  9781071602508, 9781071602515
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05707
[Journal Article] A mathematical model of multiple delayed feedback control system of the gut microbiota?Antibiotics injection controlled by measured metagenomic data2018
- Author(s)
  Dong Yueping、Takeuchi Yasuhiro、Nakaoka Shinji
- Journal Title
  
  Nonlinear Analysis: Real World Applications
  
  Volume: 43 Pages: 1-17
- DOI
  10.1016/j.nonrwa.2018.02.005
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Journal Article] A PDE multiscale model of hepatitis C virus infection can be transformed to a system of ODEs2018
- Author(s)
  K. Kitagawa, S. Nakaoka, Y. Asai, K. Watashi, S. Iwami
- Journal Title
  
  Journal of Theoretical Biology
  
  Volume: 48 Pages: 80-85
- DOI
  10.1016/j.jtbi.2018.04.006
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15KT0107, KAKENHI-PROJECT-26287025, KAKENHI-INTERNATIONAL-16K21723, KAKENHI-ORGANIZER-16H06429, KAKENHI-PUBLICLY-17H05819, KAKENHI-PROJECT-16H04845, KAKENHI-PROJECT-18H01139, KAKENHI-PROJECT-16K05265, KAKENHI-PROJECT-16K13777, KAKENHI-PROJECT-17H04085
[Journal Article] Delayed feedback induced complex dynamics in an Escherichia coli and Tetrahymena system2018
- Author(s)
  Dong Yueping、Sen Moitri、Banerjee Malay、Takeuchi Yasuhiro、Nakaoka Shinji
- Journal Title
  
  Nonlinear Dynamics
  
  Volume: 94 Issue: 2 Pages: 1447-1466
- DOI
  10.1007/s11071-018-4434-4
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265, KAKENHI-PROJECT-15H05707
[Journal Article] Data-Driven Mathematical Modeling of Microbial Community Dynamics2018
- Author(s)
  Nakaoka Shinji
- Journal Title
  
  Handbook of Statistics
  
  Volume: 39 Pages: 93-130
- DOI
  10.1016/bs.host.2018.08.001
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16K05265
[Journal Article] Sporadic on/off switching of HTLV-1 Tax expression is crucial to maintain the whole population of virus-induced leukemic cells.2018
- Author(s)
  Mahgoub M, Yasunaga JI, Iwami S, Nakaoka S, Koizumi Y, Shimura K, Matsuoka M.
- Journal Title
  
  Proc Natl Acad Sci U S A
  
  Volume: 115 Issue: 6 Pages: 529-538
- DOI
  10.1073/pnas.1715724115
- NAID
  120006697286
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0107, KAKENHI-PROJECT-16K05265, KAKENHI-PROJECT-17K07166, KAKENHI-PROJECT-16K13777, KAKENHI-PROJECT-17K19610, KAKENHI-PROJECT-16H04845, KAKENHI-PROJECT-16H05336, KAKENHI-PROJECT-26287025, KAKENHI-ORGANIZER-16H06429, KAKENHI-PROJECT-26460554, KAKENHI-PROJECT-17K10016, KAKENHI-PROJECT-16KT0111, KAKENHI-PROJECT-15H05707
[Journal Article] Dynamics of tumor immune escape via adaptive change2018
- Author(s)
  Naoki Nakada, Mizuho Nagata, Yueping Dong, Yasuhiro Takeuchi, and Shinji Nakaoka
- Journal Title
  
  NOLTA
  
  Volume: 9 Issue: 2 Pages: 295-304
- DOI
  10.1587/nolta.9.295
- NAID
  130006602760
- ISSN
  2185-4106
- Language
  English
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16K05265
[Journal Article] Dynamics of tumor immune escape via adaptive change2018
- Author(s)
  Naoki Nakada, Mizuho Nagata, Yueping Dong, Yasuhiro Takeuchi, and Shinji Nakaoka
- Journal Title
  
  Nonlinear Theory and Its Applications
  
  Volume: E9-N
- NAID
  130006602760
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15KT0147
[Journal Article] Number of infection events per cell during HIV-1 cell-free infection2017
- Author(s)
  Ito Y, Remion A, Tauzin A, Ejima K, Nakaoka S, Iwasa Y, Iwami S, Mammano F
- Journal Title
  
  Sci Rep
  
  Volume: 7 Issue: 1 Pages: 6559-6559
- DOI
  10.1038/s41598-017-03954-9
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0107, KAKENHI-PROJECT-16K13777, KAKENHI-PROJECT-16H04845, KAKENHI-PROJECT-26287025, KAKENHI-PROJECT-15H04423
[Journal Article] Human-specific adaptations in Vpu conferring anti-tetherin activity are critical for efficient early HIV-1 replication in vivo.2017
- Author(s)
  Eri Yamada, Shinji Nakaoka, Lukas Klein, Elisabeth Reith, Simon Langer, Kristina Hopfensperger, Shingo Iwami, Gideon Schreiber, Frank Kirchhoff, Yoshio Koyanagi, Daniel Sauter & Kei Sato
- Journal Title
  
  Cell Host & Microbe
  
  Volume: 23 Issue: 1 Pages: 110-120
- DOI
  10.1016/j.chom.2017.12.009
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16KT0111, KAKENHI-PROJECT-15KT0107, KAKENHI-PROJECT-16K13777, KAKENHI-PROJECT-16H04845, KAKENHI-PROJECT-26287025, KAKENHI-ORGANIZER-16H06429, KAKENHI-PUBLICLY-17H05813, KAKENHI-PROJECT-15K07166, KAKENHI-PROJECT-15KT0147
[Journal Article] HIV-1 competition experiments in humanized mice show that APOBEC3H imposes selective pressure and promotes virus adaptation.2017
- Author(s)
  Yusuke Nakano, Naoko Misawa, Guillermo Juarez-Fernandez, Miyu Moriwaki, Shinji Nakaoka, Takaaki Funo, Eri Yamada, Andrew Soper, Rokusuke Yoshikawa, Diako Ebrahimi, Yuuya Tachiki, Shingo Iwami, Reuben S. Harris, Yoshio Koyanagi & Kei Sato
- Journal Title
  
  PLOS Pathogens
  
  Volume: 13 Issue: 5 Pages: 31-31
- DOI
  10.1371/journal.ppat.1006348
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16KT0111, KAKENHI-PROJECT-15KT0107, KAKENHI-PROJECT-16K13777, KAKENHI-PROJECT-17K15197, KAKENHI-PROJECT-16H04845, KAKENHI-PROJECT-26287025, KAKENHI-PUBLICLY-17H05813, KAKENHI-PROJECT-15K07166, KAKENHI-PROJECT-15KT0147
[Journal Article] A highly pathogenic simian/human immunodeficiency virus effectively produces infectious virions compared with a less pathogenic virus in cell culture2017
- Author(s)
  Iwanami S, Kakizoe Y, Morita S, Miura T, Nakaoka S, Iwami S
- Journal Title
  
  Theor Biol Med Model
  
  Volume: 14 Issue: 1 Pages: 9-9
- DOI
  10.1186/s12976-017-0055-8
- NAID
  120006305768
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15KT0107, KAKENHI-PROJECT-16K05265, KAKENHI-PROJECT-16K13777, KAKENHI-PROJECT-16H04845, KAKENHI-PROJECT-26287025, KAKENHI-PROJECT-16H04682, KAKENHI-PROJECT-16J03672, KAKENHI-PROJECT-15KT0147, KAKENHI-PROJECT-15H05707
[Journal Article] Weighted enrichment method for prediction of transcription regulators from transcriptome and global chromatin immunoprecipitation data2016
- Author(s)
  Eiryo Kawakami, Shinji Nakaoka, Tazro Ohta and Hiroaki Kitano
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 印刷中 Issue: 11 Pages: 5010-5021
- DOI
  10.1093/nar/gkw355
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K21631, KAKENHI-PROJECT-15KT0147, KAKENHI-PROJECT-16KT0196
[Journal Article] Quantifying the effect of Vpu on the promotion of HIV-1 replication in the humanized mouse model2016
- Author(s)
  H. Ikeda, S Nakaoka, RJ. De Boer, S. Morita, N. Misawa, Y. Koyanagi, K. Aihara, K. Sato, and S. Iwami
- Journal Title
  
  Retrovirology
  
  Volume: -
- NAID
  120006353849
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0107
[Journal Article] Identifying determinants of heterogeneous transmission dynamics of the Middle East respiratory syndrome (MERS) outbreak in the Republic of Korea, 2015: a retrospective epidemiological analysis.2016
- Author(s)
  Nishiura H, Endo A, Saitoh M, Kinoshita R, Ueno R, Nakaoka S, Miyamatsu Y, Dong Y, Chowell G, Mizumoto K
- Journal Title
  
  BMJ Open
  
  Volume: 6 Issue: 2 Pages: e009936-e009936
- DOI
  10.1136/bmjopen-2015-009936
- NAID
  120005855950
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K20936, KAKENHI-PROJECT-25871132
[Journal Article] Quantifying the effect of Vpu on the promotion of HIV-1 replication in the humanized mouse model2016
- Author(s)
  H. Ikeda†, S Nakaoka†, RJ. De Boer, S. Morita, N. Misawa, Y. Koyanagi, K. Aihara, K. Sato‡, and S. Iwami‡
- Journal Title
  
  Retrovirology
  
  Volume: 13 Pages: 2-2
- NAID
  120006353849
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0107
[Journal Article] Dynamics of epidermis: A mathematical model2016
- Author(s)
  Shinji Nakaoka, Sota Kuwahara, Chang Hyeong Lee, Hyejin Jeon, Junho Lee, Yasuhiro Takeuchi, Yangjin Kim
- Journal Title
  
  Applied Science
  
  Volume: 6 Issue: 9 Pages: 252-252
- DOI
  10.3390/app6090252
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0147, KAKENHI-PROJECT-16K05265
[Journal Article] Quantifying the effect of Vpu on the promotion of HIV-1 replication in the humanized mouse model2016
- Author(s)
  Ikeda H, Nakaoka S, de Boer RJ, Morita S, Misawa N, Koyanagi Y, Aihara K, Sato K, Iwami S
- Journal Title
  
  Retrovirology
  
  Volume: 13 Issue: 1 Pages: 23-23
- DOI
  10.1186/s12977-016-0252-2
- NAID
  120006353849
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-24115008, KAKENHI-PROJECT-16KT0111, KAKENHI-PROJECT-15K07166, KAKENHI-PROJECT-15H05707
[Journal Article] Modelling Ebola virus dynamics: Implications for therapy.2016
- Author(s)
  Martyushev A, Nakaoka S, Sato K, Noda T, Iwami S.
- Journal Title
  
  Antiviral Res
  
  Volume: 135 Pages: 62-73
- DOI
  10.1016/j.antiviral.2016.10.004
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16KT0111, KAKENHI-PROJECT-15K07166, KAKENHI-PROJECT-16K05265
[Journal Article] Dynamics of HIV infection in lymphoid tissue network2016
- Author(s)
  S. Nakaoka, S. Iwami, and K. Sato
- Journal Title
  
  Journal of Mathematical Biology
  
  Volume: 72 Pages: 909-938
- Data Source
  KAKENHI-PROJECT-15KT0107
[Journal Article] Cell-to-cell infection by HIV contributes over half of virus infection2015
- Author(s)
  Shingo Iwami, Junko S. Takeuchi, Shinji Nakaoka, Fabrizio Mammano, François Clavel, Hisashi Inaba, Tomoko Kobayashi, Naoko Misawa, Kazuyuki Aihara, Yoshio Koyanagi & Kei Sato
- Journal Title
  
  eLife
  
  Volume: 4 Pages: 1-16
- DOI
  10.7554/elife.08150
- NAID
  120005997708
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K07166, KAKENHI-PROJECT-15KT0107, KAKENHI-PLANNED-24115008, KAKENHI-PROJECT-25400194, KAKENHI-PROJECT-25871132
[Journal Article] Effect of eclipse phase on quantifying viral dynamics of acute HIV-1 infection in humanized mouse model2015
- Author(s)
  Ikeda H, Nakaoka S, Sato K, Misawa N, Koyanagi Y, Iwami S
- Journal Title
  
  Nonlinear Theory and Its Application, IEICE
  
  Volume: 6
- NAID
  130004960164
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25871132
[Journal Article] Mathematical analysis and classification of tumor immune dynamics in T cell transfer treatment2015
- Author(s)
  Shinji Nakaoka
- Journal Title
  
  Nonlinear Theory and Its Application, IEICE
  
  Volume: 6
- NAID
  130004960165
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25871132
[Journal Article] A conservation law for virus infection kinetics in vitro2015
- Author(s)
  Yusuke Kakizoe, Satoru Morita, Shinji Nakaoka, Yasuhiro Takeuchi, Kei Sato, Tomoyuki Miura, Catherine A. A. Beauchemin, and Shingo Iwami
- Journal Title
  
  Journal of Theoretical Biology
  
  Volume: 376 Pages: 39-47
- DOI
  10.1016/j.jtbi.2015.03.034
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25800092, KAKENHI-PROJECT-25871132, KAKENHI-PROJECT-15K07166, KAKENHI-PROJECT-26287025
[Journal Article] Dynamics of HIV infection in lymphoid tissue network2015
- Author(s)
  Shinji Nakaoka, Shingo Iwami & Kei Sato
- Journal Title
  
  Journal of Mathematical Biology
  
  Volume: 72 Issue: 4 Pages: 909-938
- DOI
  10.1007/s00285-015-0940-x
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K07166, KAKENHI-PROJECT-25871132, KAKENHI-PROJECT-26287025
[Journal Article] A method to determine the duration of the eclipse phase for in vitro infection with a highly pathogenic SHIV strain2015
- Author(s)
  Yusuke Kakizoe, Shinji Nakaoka, Catherine A. A. Beauchemin, Satoru Morita, Hiromi Mori, Tatsuhiko Igarashi, Kazuyuki Aihara, Tomoyuki Miura, Shingo Iwami
- Journal Title
  
  Scientific Reports
  
  Volume: x
- NAID
  120005689172
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25871132
[Journal Article] Dynamical behavior of combinational immune boost against tumor2015
- Author(s)
  Mizuho Nagata, Yutaro Furuta, Yasuhiro Takeuchi, and Shinji Nakaoka
- Journal Title
  
  Japan Journal of Industrial and Applied Mathematics
  
  Volume: 32 Issue: 3 Pages: 759-770
- DOI
  10.1007/s13160-015-0193-5
- NAID
  210000174398
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25871132
[Journal Article] Cost-effective length and timing of school closure during an influenza pandemic depend on the severity2014
- Author(s)
  H. Nishiura, K. Ejima, K. Mizumoto, S. Nakaoka, H. Inaba, S. Imoto, R. Yamaguchi and M. Saito
- Journal Title
  
  Theor. Biol. Med. Modelling
  
  Volume: 11:5 Issue: 1 Pages: 1-14
- DOI
  10.1186/1742-4682-11-5
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25400194, KAKENHI-PROJECT-25871132
[Journal Article] Multi-scale mathematical modeling and simulation of cellular dynamical process2014
- Author(s)
  Shinji Nakaoka
- Journal Title
  
  Epidermal Cells: Methods and Protocols, Third Edition.
  
  Volume: 印刷中
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] エネルギー地形を利用した腸内細菌叢データの数理解析2019
- Author(s)
  中岡慎治
- Organizer
  第36回和漢医薬学会学術大会
- Invited
- Data Source
  KAKENHI-PROJECT-15H05707
[Presentation] 疑似細胞分化過程からデータ駆動型数理モデルを導出する試み2019
- Author(s)
  中岡慎治
- Organizer
  分子生物学会
- Invited
- Data Source
  KAKENHI-PROJECT-15H05707
[Presentation] Application of Energy Landscape Analysis for Cellular Differentiation Process2019
- Author(s)
  Shinji Nakaoka
- Organizer
  A3 foresight workshop ‘Modeling and Simulation of Hierarchical and Heterogeneous Flow Systems with Applications to Materials Science Ⅵ’
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05707
[Presentation] Trajectory inference of disease onset from non-time series microbiome datasets2018
- Author(s)
  S. Nakaoka
- Organizer
  South Lake Workshop in Bioinformatics and System Biology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05707
[Presentation] Mathematical and informatics analysis of community composition change of the gut microbiota2018
- Author(s)
  Shinji Nakaoka
- Organizer
  2018 INTERNATIONAL WORKSHOP ON MATHEMATICAL BIOLOGY
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Trajectory inference of disease onset from non-time series microbiome datasets2018
- Author(s)
  Shinji Nakaoka
- Organizer
  South Lake Workshop in Bioinformatics and System Biology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Trajectory inference of HIV progression with microbiome data2018
- Author(s)
  Shinji Nakaoka
- Organizer
  SMB&JSMB2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Compositional change of the gut microbiota in HIV infected humanized mice2018
- Author(s)
  Shinji Nakaoka, Kei Sato
- Organizer
  Next Gen Immunology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Invasibility threshold and persistence of bacterial species2018
- Author(s)
  Shinji Nakaoka
- Organizer
  Annual meeting of Korean Society for Industrial and Applied Mathematics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Mathematical and informatics analysis of community composition change of the gut microbiota2018
- Author(s)
  Shinji Nakaoka
- Organizer
  2018 INTERNATIONAL WORKSHOP ON MATHEMATICAL BIOLOGY
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Development and applications of an optimization method to detect neighbor equilibria of a trajectory for Lotka-Volterra systems2018
- Author(s)
  Shinji Nakaoka
- Organizer
  12TH AIMS INTERNATIONAL CONFERENCE
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Invasibility threshold and persistence of bacterial species2018
- Author(s)
  S. Nakaoka
- Organizer
  Annual meeting of Korean Society for Industrial and Applied Mathematics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05707
[Presentation] Development and applications of an optimization method to detect neighbor equilibria of a trajectory for Lotka-Volterra systems2018
- Author(s)
  S. Nakaoka
- Organizer
  12th AIMS International Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05707
[Presentation] Detection of responding factors to external perturbation in a microbial community2017
- Author(s)
  Shinji Nakaoka
- Organizer
  International Symposium on Nonlinear Theory and Its Applications
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] ウイルス感染時における常在細菌叢との宿主免疫応系の代謝相互作用に関するデータマイニング2017
- Author(s)
  中岡慎治,佐藤佳
- Organizer
  第90回日本細菌学会総会
- Place of Presentation
  仙台、日本
- Invited
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Detection of responding factors to external perturbation in a microbial community2017
- Author(s)
  Shinji Nakaoka
- Organizer
  Proceedings of International Symposium on Nonlinear Theory and Its Applications
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Data mining of metabolic interactions in a gut microbial community induced by viral infection2017
- Author(s)
  Shinji Nakaoka, Kei Sato (佐藤佳)
- Organizer
  SMB 2017 Annual Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] ウイルス感染時における常在細菌叢との宿主免疫応系の代謝相互作用に関するデータマイニング2017
- Author(s)
  中岡慎治,佐藤佳
- Organizer
  第90回日本細菌学会総会
- Place of Presentation
  仙台国際センター
- Invited
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Data mining of metabolic interactions in a gut microbial community induced by viral infection2017
- Author(s)
  Shinji Nakaoka, Kei Sato
- Organizer
  SMB 2017 Annual Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] 複合体が生み出すシグナル伝達確率的ダイナミクスの制御機構2016
- Author(s)
  川上英良, 古関恵太, 中岡慎治
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜（神奈川県・横浜市）
- Invited
- Data Source
  KAKENHI-PROJECT-16KT0196
[Presentation] 複合体が生み出すシグナル伝達確率的ダイナミクスの制御機構2016
- Author(s)
  川上英良, 古関恵太, 中岡慎治
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Invited
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Exploration of combinatorial emergence in coupled boolean network systems2016
- Author(s)
  Shinji Nakaoka
- Organizer
  The 22nd International Conference on Difference Equations and Applications
- Place of Presentation
  大阪, 日本
- Year and Date
  2016-07-24
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] 細菌感染を軸としたマルチスケールシミュレーション2016
- Author(s)
  中岡慎治
- Organizer
  第８９回日本細菌学会総会
- Place of Presentation
  大阪国際交流センター
- Year and Date
  2016-03-23
- Invited
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Development of a computational grammar for immune cell processes2016
- Author(s)
  中岡慎治
- Organizer
  日本数理生物学会年会
- Place of Presentation
  博多、日本
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Investigation for population kinetics of reservoir cells in HIV infection2016
- Author(s)
  Shinji Nakaoka
- Organizer
  A3 Workshop on Interdisciplinary Research Connecting Mathematics and Biology
- Place of Presentation
  北京, 中国
- Year and Date
  2016-04-22
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] Exploration of combinatorial emergence in coupled boolean network systems2016
- Author(s)
  Shinji Nakaoka
- Organizer
  The 22nd International Conference on Difference Equations and Applications
- Place of Presentation
  大阪, 日本
- Year and Date
  2016-07-24
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K05265
[Presentation] 階層間フィードバックを考慮した生命系マルチスケール数理モデル研究2016
- Author(s)
  中岡慎治
- Organizer
  非線形現象の数値シミュレーションと解析
- Place of Presentation
  北海道大学
- Year and Date
  2016-03-08
- Invited
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Mathematical modeling and simulation for a coupled communication system of immune cells2015
- Author(s)
  Shinji Nakaoka
- Organizer
  4th IFAC Conference on Analysis and Control of Chaotic Systems
- Place of Presentation
  Tokyo Metropolitan University
- Year and Date
  2015-08-26
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] 遺伝子発現から転写制御因子を予測する確率的Gene Set Enrichment解析2015
- Author(s)
  川上英良、中岡慎治、北野宏明
- Organizer
  BMB2015 (第38回日本分子生物学会年会、第88回日本生化学会大会　合同大会）
- Place of Presentation
  神戸ポートアイランド
- Year and Date
  2015-12-04
- Invited
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Migratory dynamics of lymphocyte trafficking on a lymph node network2015
- Author(s)
  Shinji Nakaoka
- Organizer
  Winter Q-bio 2015
- Place of Presentation
  Maui Hawaii
- Year and Date
  2015-02-19
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Micro-ecomics を支える数理2015
- Author(s)
  中岡慎治
- Organizer
  第30回微生物生態学会
- Place of Presentation
  土浦市役所　亀城プラザ
- Year and Date
  2015-10-20
- Invited
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Dynamics of HIV infection in lymphoid tissue network2015
- Author(s)
  Shinji Nakaoka, Shingo Iwami, Kei Sato
- Organizer
  2nd Virus Dynamics Workshop
- Place of Presentation
  Fields Institute, Toronto, Canada
- Year and Date
  2015-07-17
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Ordinary differential equations for HIV infection in lymphoid tissue network2015
- Author(s)
  Shinji Nakaoka, Shingo Iwami, Kei Sato
- Organizer
  RIMS 研究集会「実領域における常微分方程式の定性的研究」
- Place of Presentation
  京都大学数理解析研究所
- Year and Date
  2015-11-10
- Invited
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] 人工生態系に関連した理論の発展2015
- Author(s)
  中岡慎治
- Organizer
  「細胞を創る」研究会 8.0
- Place of Presentation
  大阪大学吹田キャンパス銀杏会館
- Year and Date
  2015-11-13
- Invited
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] HIV infection in lymphoid tissue-blood stream network2015
- Author(s)
  Shinji Nakaoka, Shingo Iwami, Kei Sato
- Organizer
  IMAID 2015 (Innovative Mathematical Modeling for the Analysis of Infectious Disease Data)
- Place of Presentation
  Hokkaido University
- Year and Date
  2015-10-30
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Impaired balance between antagonistic transcriptional modules during the progression of inflammatory skin disease2015
- Author(s)
  Eiryo Kawakami, Hisahiro Yoshida, Takuwa Yasuda, Shinji Nakaoka, Hiroaki Kitano
- Organizer
  Functional Genomics and Systems Biology: From Model Organisms to Human Health
- Place of Presentation
  Welcome Trust Sanger Institute
- Year and Date
  2015-10-29
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15KT0147
[Presentation] Mathematical modeling and simulation of HIV infection in a lymph node network2015
- Author(s)
  Shinji Nakaoka
- Organizer
  10th Colloquium on the Qualitative Theory of Differential Equations
- Place of Presentation
  Bolyai Institute, Szeged, Hungary
- Year and Date
  2015-07-03
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] 癌の免疫療法に対する数理モデル2014
- Author(s)
  Shinji Nakaoka
- Organizer
  第 11 回「生物数学の理論とその応用
- Place of Presentation
  京都大学数理解析研究所
- Year and Date
  2014-09-11
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Stochastic cell fate determination of stem cell dynamics2014
- Author(s)
  Shinji Nakaoka
- Organizer
  JSMB/SMB2014
- Place of Presentation
  Osaka, Japan
- Year and Date
  2014-07-29
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Modeling of dynamic structural change of immune response during acute inflammation2014
- Author(s)
  Shinji Nakaoka
- Organizer
  JSMB/SMB2014
- Place of Presentation
  Osaka, Japan
- Year and Date
  2014-07-31
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Mathematical Modeling and Simulation of Tumor immune therapy2014
- Author(s)
  Shinji Nakaoka
- Organizer
  Application of ecological and mathematical theory to cancer: new challenges
- Place of Presentation
  NIMS, South Korea
- Year and Date
  2014-05-13
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Mathematical modeling of tumor elimination by cell-mediated and humoral immunity2014
- Author(s)
  Shinji Nakaoka
- Organizer
  偏微分方程式岡山小研究集会
- Place of Presentation
  岡山大学
- Year and Date
  2014-12-02
- Invited
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Stochastic Simulations for Spatial Spread of Inflammatory Response2013
- Author(s)
  Shinji Nakaoka
- Organizer
  The 3rd International Symposium on Innovative Mathematical Modeling
- Place of Presentation
  Tokyo, Japan
- Data Source
  KAKENHI-PROJECT-25871132
[Presentation] Population dynamics of layer-structured epidermal cells --mathematical analysis and stochastic simulation-2013
- Author(s)
  Shinji Nakaoka
- Organizer
  The Fourth Conference on Computational and Mathematical Population Dynamics (CMPD4)
- Place of Presentation
  Taiyuan, China
- Data Source
  KAKENHI-PROJECT-25871132

1. Kawakami Eiryo (30725338)

# of Collaborated Projects: 3 results

# of Collaborated Products: 5 results
2. GILMOUR Stuart (20608913)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
3. Shibuya Kenji (50322459)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
4. INOUE Manami (70250248)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
5. RAHMAN Mizanur (10726433)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
6. ABE Sarah (60739530)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
7. Iwami Shingo (90518119)

# of Collaborated Projects: 1 results

# of Collaborated Products: 13 results
8. IKEDA Nayu (20573603)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. SAITO Eiko (60738079)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. AIHARA Kazuyuki (40167218)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. Yoshitoshi Ogura (40363585)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. Sato Kei (10593684)

# of Collaborated Projects: 1 results

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Nakaoka Shinji 中岡 慎治

NAKAOKA shinji 中岡 慎冶

中岡 慎冶 ナカオカ シンジ

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Construction of state transition model based on energy landscapePrincipal Investigator

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Analysis of multi-scale mathematical models with inter-hierarchical feedback effects and their applications for diseasePrincipal Investigator

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Experimental evolution of Saccharomyces cerevisiaePrincipal Investigator

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Multiscale modeling and simulation study for immune inflammatory response at the skin tissuePrincipal Investigator

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Nakaoka Shinji 中岡慎治

NAKAOKA shinji 中岡慎冶

中岡慎冶ナカオカシンジ