IKEMURA Toshimichi 池村淑道

Researcher Number	50025475
Other IDs
External Links
Affiliation (Current)	2022: 長浜バイオ大学, バイオサイエンス学部, 客員教授
Affiliation (based on the past Project Information) *help	2017 – 2020: 長浜バイオ大学, バイオサイエンス学部, 客員教授 2016: 長浜バイオ大学, バイオサイエンス研究科, 客員教授 2016: 長浜バイオ大学, 客員教授 2015: 長浜バイオ大学, バイオサイエンス研究科, 教授 2014: 長浜バイオ大学, バイオサイエンス研究科, 客員教授 … More
Review Section/Research Field	Principal Investigator 遺伝 / Biological Sciences / Evolutionary biology / ゲノム情報科学 / Bioinformatics/Life informatics / Life / Health / Medical informatics / 遺伝学 Except Principal Investigator 遺伝 / Biological Sciences / Historical studies in general … More
Keywords	Principal Investigator SOM / 染色体バンド / バンド境界 / 複製タイミング / セントロメア / GC含量 / MHC / 病因遺伝子 / 自己組織化マップ / 核内配置 … More Except Principal Investigator 遺伝暗号 / 分子進化 / 反復配列 / コドン使用 / 細胞外マトリックス / テネイシン / テネイシンX / テネイシン・ファミリー / 主要組織適合性抗原遺伝子群 / 動く遺伝子 / 突然変異 / 分子適応 / 暗号解読 / tRNA / 染色体不安定性 / tRNAの新しい機能 / Wobbleの法則 / wobbleの法則 / ジーン・ターゲティング / がん化 / Bub / セントロメア / ZW10 / 紡錘体チェックポイント / Mad / アーカイブズ / 記録 / 原爆 / アーカイブズ学 / p53 / replication timing / tRNA identity / RNA機能 / クローニング / 下等脊椎動物MHC / 非古典的MHC / HLA / 自己免疫 / MHC拘束 / 起源と進化 / T細胞レパートリー / ジーン・タ-デティング / 心筋 / ジーン・ターゲテイング / がん浸潤・転移 / DT40細胞 / ZW250 / 戦争 / 植民地 / 占領地 / 原子爆弾 / 核兵器 / 情報 / 第2次世界大戦 / 資料 / 発生分化 / 細胞分化 / 神経誘導 / スプライシング / 遺伝子発現制御bombyxin / 染色体のバンド構造 / テラトカルシノマ / コドン / コドン選択 / tRNA像遺伝子 / RNAの新機能 / オルガネラ / 神経誘導因子 / 変態ホルモン / ホメオボックス / δークリスタリン / 植物器官形成遺伝子 / 染色体のGC分節領域 / モザイク卵 / トリプシンインヒビター / 遺伝子機能予測 / 機能的ドメイン / 分子系統樹 / セリンフロテアーゼ / MHC / 塩基配列 / シーケンシング / セリンプロテアーゼ / molecular evolution / prediction of gene function / functional domain / Molecular Phylogenetic Tree / serine protease / MHC (major histocompatibility complex) / nucleotide sequence / sequencing / 主要組織適合性抗原遺伝子 / extraccllular matrix / tenascinX / tenascin family / major histocompatibility complex (MHC) / 複製タイミング / マイクロアレイ / ゲノムワイド / 遺伝子不安定性 / アンプリコン / replicatino timing / S期内複製時期 / がん抑制遺伝子p53 / ゲノム不安定性 / DNAマイクロアレイ / microarray / genome-wide / genetic instability / chromosome instability / 放射線被害 / デジタルアーカイブズ / 国際コンソーシアム / ABCC / 原爆傷害調査委員会 / 放射線 / デジタル・アーカイブズ / 広島 / 長崎 / 一括学習型自己組織化マップ / 連続塩基組成 / 水平伝播遺伝子 / 環境適応 / 共生細菌 / 系統推定 / 水平伝播候補遺伝子 / 南極細菌 / BLSOM / SC-BLSOM / COVID-19 / SARS-CoV-2 / AI / oligonucleotide / RNA virus / host adaptation / big data / evolution / 新型コロナウイルス / エボラウイルス / 新興感染症 / RNAウイルス / 人工知能 / ビッグデータ解析 / 機械学習 / インフルエンザウイルス / デング熱ウイルス / ジカ熱ウイルス / 自己組織化マップ / miRNA / ビッグデータ / ウイルス / 感染症 / 時系列解析 Less

AI-supported studies of RNA viruses
- Principal Investigator
  
  和田健之介
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 49060:Virology-related
- Research Institution
  Nagahama Institute of Bio-Science and Technology
Development of horizontal gene transfer detection system and elucidation of environmental adaptation and co-evolution process
- Principal Investigator
  
  Abe Takashi
- Project Period (FY)
  2017 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Niigata University
Efficient knowledge discovery from life-science big dataPrincipal Investigator
- Principal Investigator
  
  Ikemura Toshimichi
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Nagahama Institute of Bio-Science and Technology
Study on Developing of a Digital Archives relating to Atomic-Bomb Radiation Effect on Human Body by an International Consortium
- Principal Investigator
  
  Ando Masahito
- Project Period (FY)
  2013 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Historical studies in general
- Research Institution
  Gakushuin University
Genomic sequence studies of zoonotic disease viruses including influenza viruses with a novel bioinformatics methodPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2011 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Nagahama Institute of Bio-Science and Technology
Archival Research on the Records Relating to the Former Japanese Colonies, Occupied Territories and the Atomic-Bombs
- Principal Investigator
  
  ANDO Masahito
- Project Period (FY)
  2009 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Historical studies in general
- Research Institution
  Gakushuin University
Function prediction of poorly-characterized protein genes found in genome sequences with high-performance supercomputers and its publicationPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2008 – 2010
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  ゲノム情報科学
- Research Institution
  Nagahama Institute of Bio-Science and Technology
全ゲノム情報に基づいた病原微生物と常在菌の多様性と病原遺伝子に関する情報学的研究Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Nagahama Institute of Bio-Science and Technology
Sequence alignment-free method for phylogenetic and functional prediction and its application to molecular evolutionary studiesPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  Nagahama Institute of Bio-Science and Technology
全ゲノム情報に基づいた病原微生物と常在菌の多様性と病原遺伝子に関する情報学的研究Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2005
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Graduate University for Advanced Studies
ゲノムに潜むシグナル・モチーフ部品の網羅的探索のための自己組織化地図Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Graduate University for Advanced Studies
Comparative analysis of replication timing among human cancer cell lines using microarray
- Principal Investigator
  
  WATANABE Yishihisa
- Project Period (FY)
  2004 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  Hamamatsu University School of Medicine
Bioinformatics strategy for unveiling hidden genome signatures and biodiversityPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2004 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  The Graduate University for Advanced Studies (Sokendai), Hayama Center for Advanced Research
ゲノムに潜むシグナル・モチーフ部品の網羅的探索のための自己組織化地図Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2003
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
高等動物ゲノム配列と染色体構造の統合をめざす複製タイミングの高精度地図作成Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2002
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
新規セントロメアタンパク質による紡錘体チェックポイント制御機構の解析
- Principal Investigator
  
  深川竜郎
- Project Period (FY)
  2001
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
高等動物ゲノム配列と染色体構造の統合をめざす複製タイミングの高精度地図作成Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2001
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
染色体バンド境界がハイリスク・ハイリターン領域である可能性の検証Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2001
- Research Category
  
  Grant-in-Aid for Exploratory Research
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
ヒトゲノム広領域のGC含量分布とS期内複製時期の測定Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  National Institute of Genetics
高等動物ゲノム配列と染色体構造の統合をめざす複製タイミングの高精度地図作成Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
セントロメアタンパク質ZW10の細胞周期制御機構およびがん細胞における変異の解析
- Principal Investigator
  
  深川竜郎
- Project Period (FY)
  2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
Molecular mecbanism for determination ofdynamics and positioning in nucleus of vertebratesPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2000 – 2001
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  遺伝
- Research Institution
  Natiomal Institute of Genetics
Creation of a mouse with human MHC by Chromosomal- and Developmental-engineering methodsPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2000 – 2002
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
セントロメア機能における特殊DNA高次構造とCENP-Cの役割Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1999
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  National Institute of Genetics
ヒトゲノムGC含量ドメイン構造の解析と遺伝子高密度領域の探索Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1999
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  National Institute of Genetics
染色体バンド境界の分子レベルでの特定とその機能探索Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1999 – 2000
- Research Category
  
  Grant-in-Aid for Exploratory Research
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
高等動物の染色体バンド領域の核内配置とその動態Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1998
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  National Institute of Genetics
ヒトゲノムGC含量ドメイン構造の解析と遺伝子高密度領域の探索Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1998
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  National Institute of Genetics
高等動物の染色体バンド境界領域の核内配置とその動態Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1997
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
ヒトゲノムGC含量ドメイン構造の解析と遺伝子高密度領域の探索Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1997
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
Structures and functions of band boundaries of mammalian chromosomesPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  1997 – 1998
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  遺伝
- Research Institution
  NATIONAL INSTITUTE OF GENETICS
高等動物の染色体バンド境界領域の核内配置とその動態Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1996
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
ヒトゲノムGC含量ドメイン構造の解析と遺伝子高密度領域の探索Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1996
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
Methods to analyze nuclear organizition of mammalian chromosomes in interphase nucleiPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  1996 – 1997
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  遺伝
- Research Institution
  NATIONAL INSTITUTE OF GENETICS
新しく見い出した細胞外マトリックス蛋白質のがん浸潤と転移への関与についての研究
- Principal Investigator
  
  松本健一
- Project Period (FY)
  1995
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
高等動物の染色体バンド境界領域の核内配置とその動態Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1995
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
Study on ECM tenascin-family proteins by gene knockoutPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  1995
- Research Category
  
  Grant-in-Aid for international Scientific Research
- Research Institution
  NATIONAL INSTITUTE OF GENETICS
Structure and function of chromosome band boundaries of warm-blooded vertebratesPrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  1995 – 1996
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  遺伝
- Research Institution
  NATIONAL INSTITUTE OF GENETICS
Prediction of gene functions by use of molecular evolutionary approach
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  1995 – 1997
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
Studies on extracellular matrix tenascin family
- Principal Investigator
  
  MATSUMOTO Ken-ichi
- Project Period (FY)
  1995 – 1997
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Developmental biology
- Research Institution
  National Institute of Genetics
ゲノムコドンデータベースの構築とコーディング領域推定法の開発Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1994
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
心筋で高い発現をする細胞外マトリックスTN-Xの心筋の発生・分化における役割
- Principal Investigator
  
  松本健一
- Project Period (FY)
  1994
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
新しく見い出した細胞外マトリックス蛋白質のがん浸潤と転移への関与についての研究
- Principal Investigator
  
  松本健一
- Project Period (FY)
  1994
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
ヒトゲノムのコーディング領域推定とGC含量モザイク構造の解析Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1993
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
自己・非自己識別分子MHCの起源と進化
- Principal Investigator
  
  高畑尚之
- Project Period (FY)
  1993 – 1994
- Research Category
  
  Grant-in-Aid for Co-operative Research (A)
- Research Field
  
  遺伝
- Research Institution
  The Graduate University for Advanced Studies
ヒトゲノム遺伝子コーディング領域の多変量解析による推定法の確立Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1992
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
細胞間マトリックスタンパク質遺伝子の多様なオルタナティブスプライシング機構の研究Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1992
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
Chromosome bands and giant G+C% mosaic structures of higher vertebrates genomePrincipal Investigator
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  1992 – 1993
- Research Category
  
  Grant-in-Aid for General Scientific Research (C)
- Research Field
  
  遺伝学
- Research Institution
  National Institute of Genetics
遺伝暗号の可変性
- Principal Investigator
  
  大沢省三
- Project Period (FY)
  1991
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Nagoya University
遺伝暗号の可変性
- Principal Investigator
  
  大沢省三
- Project Period (FY)
  1990
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Nagoya University
進化学的視野をもつ分子遺伝学的研究
- Principal Investigator
  
  武藤あきら
- Project Period (FY)
  1989
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Nagoya University
遺伝暗号の可変性
- Principal Investigator
  
  大沢省三
- Project Period (FY)
  1989
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Nagoya University
コドン選択Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1989 – 1991
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
コドン選択Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1989 – 1991
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
コドン選択Principal Investigator
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  1989 – 1991
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
機能発現系の遺伝的制御
- Principal Investigator
  
  大沢省三
- Project Period (FY)
  1988
- Research Category
  
  Grant-in-Aid for Special Project Research
- Research Institution
  Nagoya University
遺伝暗号の可変性
- Principal Investigator
  
  大沢省三
- Project Period (FY)
  1988
- Research Category
  
  Grant-in-Aid for Co-operative Research (B)
- Research Institution
  Nagoya University
進化学的視野をもつ分子遺伝学的研究
- Principal Investigator
  
  武藤〓
- Project Period (FY)
  1988
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Nagoya University
遺伝暗号とtRNA研究の新しい展開
- Principal Investigator
  
  大澤省三
- Project Period (FY)
  1987
- Research Category
  
  Grant-in-Aid for Co-operative Research (B)
- Research Field
  
  分子遺伝学・分子生理学
- Research Institution
  Nagoya University
進化学的視野をもつ分子遺伝学的研究
- Principal Investigator
  
  武藤〓
- Project Period (FY)
  1987
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Nagoya University
機能発現系の遺伝的制御
- Principal Investigator
  
  大澤省三
- Project Period (FY)
  1986 – 1988
- Research Category
  
  Grant-in-Aid for Special Project Research
- Research Institution
  Nagoya University

[Book] Advance in Viral Genome Research2013
- Author(s)
  Yuki Iwasaki, Toshimichi Ikemura, Kennosuke Wada, Yoshiko Wada and Takashi Abe.
- Total Pages
  18
- Publisher
  Nova Science Publishers
- Data Source
  KAKENHI-PROJECT-23500371
[Book] マリンメタゲノムの有効利用(松永是,竹山春子監修)2009
- Author(s)
  阿部貴志, 上原啓史, 金谷重彦, 池村淑道
- Total Pages
  279
- Publisher
  シーエムシー出版
- Data Source
  KAKENHI-PROJECT-20510194
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  阿部貴志, 池村淑道, 木ノ内誠, 中村由紀子, 前野聖, 金谷重彦
- Total Pages
  12
- Publisher
  シュプリンガージャパン出版
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  松浦弥三郎, 阿部貴志, 池村淑道, 徳高平蔵, 大北正昭
- Total Pages
  5
- Publisher
  シュプリンガージャパン出版
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  松浦弥三郎, 阿部貴志, 池村淑道, 徳高平蔵, 大北正昭
- Total Pages
  5
- Publisher
  シュプリンガージャパン出版
- Data Source
  KAKENHI-PROJECT-18018015
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  阿部貴志, 池村淑道, 木ノ内誠, 中村由紀子, 前野聖, 金谷重彦
- Total Pages
  12
- Publisher
  シュプリンガージャパン出版
- Data Source
  KAKENHI-PROJECT-18018015
[Book] DNA Structure, Chromation and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Hanaya, S., Kosaka, Y., Ikemura, T.
- Publisher
  Rescarch Signpost
- Data Source
  KAKENHI-PROJECT-18570216
[Book] DNA Structure, Chromatin and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Kosaka, Y., Ikemura, T.
- Total Pages
  252
- Publisher
  Research Signpost
- Data Source
  KAKENHI-PROJECT-18018015
[Book] DNA Structure, Chromatin and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Kosaka, Y. and Ikemura, T.
- Total Pages
  16
- Publisher
  Research Signpost
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Human cell-dependent, directional, time-dependent changes in the mono- and oligonucleotide compositions of SARS-CoV-2 genomes2021
- Author(s)
  Yuki Iwasaki, Takashi Abe, Toshimichi Ikemura
- Journal Title
  
  BMC Microbiol.
  
  Volume: 21
- DOI
  10.1186/s12866-021-02158-6
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K07151
[Journal Article] Time-series trend of pandemic SARS-CoV-2 variants visualized using batch-learning self-organizing map for oligonucleotide compositions2021
- Author(s)
  Takashi Abe, Ryuki Furukawa, Yuki Iwasaki, Toshimichi Ikemura
- Journal Title
  
  bioRxiv
  
  Volume: -
- DOI
  10.1101/2021.04.15.439956
- Open Access
- Data Source
  KAKENHI-PROJECT-18K07151
[Journal Article] A strategy for predicting gene functions from genome and metagenome sequences on the basis of oligopeptide frequency distance2020
- Author(s)
  Abe Takashi、Ikarashi Ryo、Mizoguchi Masaya、Otake Masashi、Ikemura Toshimichi
- Journal Title
  
  Genes Genet. Syst.
  
  Volume: 95 Issue: 1 Pages: 11-19
- DOI
  10.1266/ggs.19-00041
- NAID
  130007834262
- ISSN
  1341-7568, 1880-5779
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K00401
[Journal Article] Mb-level CpG and TFBS islands visualized by AI and their roles in the nuclear organization of the human genome2020
- Author(s)
  Kennosuke Wada, Yoshiko Wada, Toshimichi Ikemura
- Journal Title
  
  Genes Genet. Syst.
  
  Volume: 95 Issue: 1 Pages: 29-41
- DOI
  10.1266/ggs.19-00027
- NAID
  130007834265
- ISSN
  1341-7568, 1880-5779
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K07151
[Journal Article] Time-series analyses of directional sequence changes in SARS-CoV-2 genomes and an efficient search method for candidates for advantageous mutations for growth in human cells2020
- Author(s)
  Kennosuke Wada, Yoshiko Wada, Toshimichi Ikemura
- Journal Title
  
  Gene: X
  
  Volume: 5
- DOI
  10.1016/j.gene.2020.100038
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K07151
[Journal Article] Unsupervised explainable AI for simultaneous molecular evolutionary study of forty thousand SARS-CoV-2 genomes2020
- Author(s)
  Toshimichi Ikemura, Kennosuke Wada, Yoshiko Wada, Yuki Iwasaki, Takashi Abe
- Journal Title
  
  bioRxiv
  
  Volume: -
- DOI
  10.1101/2020.10.11.335406
- Open Access
- Data Source
  KAKENHI-PROJECT-18K07151
[Journal Article] Time-series oligonucleotide count to assign antiviral siRNAs with long utility fit in the big data era2017
- Author(s)
  K. Wada, Y. Wada, Y. Iwasaki, T.Ikemura
- Journal Title
  
  Gene Therapy
  
  Volume: 24 Pages: 668-673
- DOI
  10.1038/gt.2017.76
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26330334
[Journal Article] An artificial intelligence approach fit for tRNA gene studies in the era of big sequence data2017
- Author(s)
  Yuki Iwasaki, Takashi Abe, Kennosuke Wada, Yoshiko Wada, Toshimichi Ikemura
- Journal Title
  
  Genes Genet. Syst.
  
  Volume: 印刷中 Issue: 1 Pages: 43-54
- DOI
  10.1266/ggs.16-00068
- NAID
  130006073276
- ISSN
  1341-7568, 1880-5779
- Language
  English
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26330334, KAKENHI-PROJECT-17K00401
[Journal Article] Directional and reoccurring sequence change in zoonotic RNA virus genomes visualized by time-series word count2016
- Author(s)
  Yoshiko Wada, Kennosuke Wada, Yuki Iwasaki, Shigehiko Kanaya, Toshimichi Ikemura
- Journal Title
  
  Scientific Reports
  
  Volume: 6
- DOI
  10.1038/srep36197
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26330334
[Journal Article] Development of Self-Compressing BLSOM for Comprehensive Analysis of Big Sequence Data.2015
- Author(s)
  Akihito Kikuchi, Toshimichi Ikemura, and Takashi Abe.
- Journal Title
  
  BioMed Research International
  
  Volume: 2015 Pages: 506052-506052
- DOI
  10.1155/2015/506052
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26330327, KAKENHI-PROJECT-26330334
[Journal Article] CG-containing oligonucleotides and transcription factor-binding motifs are enriched in human pericentric regions2015
- Author(s)
  Yoshiko Wada, Yuki Iwasaki, Takashi Abe, Kennosuke Wada, Ikuo Tooyama and Toshimichi Ikemura.
- Journal Title
  
  Genes Genet. Syst.
  
  Volume: 90 Issue: 1 Pages: 43-53
- DOI
  10.1266/ggs.90.43
- NAID
  130005083385
- ISSN
  1341-7568, 1880-5779
- Language
  English
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26330334
[Journal Article] Visualization of genome signatures of eukaryote genomes by Batch-Learning Self-Organizing Map (BLSOM) with a special emphasis on Drosophila genomes.2014
- Author(s)
  Takashi Abe, Yuta Hamao, Toshimichi Ikemura
- Journal Title
  
  BioMed Research International
  
  Volume: Article ID 985706 Pages: 985706-985706
- DOI
  10.1155/2014/985706
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23710242, KAKENHI-PROJECT-26330327, KAKENHI-PROJECT-26330334
[Journal Article] Evolutionary Changes in Vertebrate Genome Signatures with Special Focus on Coelacanth.2014
- Author(s)
  Iwasaki Y, Abe T, Okada N, Wada K, Wada Y, Ikemura T.
- Journal Title
  
  DNA Res.
  
  Volume: 21 Pages: 459-467
- DOI
  10.1093/dnares/dsu012
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26291075, KAKENHI-PROJECT-26330327, KAKENHI-PROJECT-26330334
[Journal Article] Novel bioinformatics strategies for prediction of directional sequence changes in influenza virus genomes and for surveillance of potentially hazardous strains2014
- Author(s)
  Bai Y, Iwasaki Y, Kanaya S, Zhao Y, lkemura Y
- Journal Title
  
  BMC Infect Dis.
  
  Volume: Volume 2014(2014)Article ID 765648 Pages: 765648-765648
- DOI
  10.1155/2014/765648
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-12J09979, KAKENHI-PROJECT-23500371, KAKENHI-PROJECT-26330334
[Journal Article] A novel bioinformatics strategy to analyze microbial big sequence data for efficient knowledge discovery: Batch-Learning Self Organizing Map (BLSOM)2013
- Author(s)
  Iwasaki Y, Abe T. Wada K, Wada Y, Ikemura T
- Journal Title
  
  Microorganisms
  
  Volume: 1 Pages: 137-157
- DOI
  10.3390/microorganisms1010137
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12J09979, KAKENHI-PROJECT-23500371, KAKENHI-PROJECT-23710242
[Journal Article] A novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks.2013
- Author(s)
  Nakao R, Abe T, Nijhof AM, Yamamoto S, Jongejan F, Ikemura T, Sugimoto C.
- Journal Title
  
  ISME J
  
  Volume: 7 Pages: 1003-1015
- DOI
  10.1038/ismej.2012.171
- NAID
  120005323598
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23500371, KAKENHI-PROJECT-23710242, KAKENHI-PROJECT-24880003
[Journal Article] 新規情報学的手法を用いたインフルエンザウイルスのゲノム塩基配列の変化の方向性の予測2012
- Author(s)
  岩崎裕貴、阿部貴志、和田健之介、池村淑道
- Journal Title
  
  生物工学
  
  Volume: 90 Pages: 769-772
- NAID
  110009580294
- Data Source
  KAKENHI-PROJECT-23500371
[Journal Article] tRNADB-CE 2011 : tRNA gene database curated manually by experts2011
- Author(s)
  T. Abe, T. Ikemura, Y. Ohara, H. Uehara, M. Kinouchi, S. Kanaya, Y. Yamada A.
- Journal Title
  
  Nucleic Acids Res
  
  Volume: Vol.37 Pages: 163-168
- DOI
  10.1093/nar/gkn692
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194, KAKENHI-PROJECT-23380045
[Journal Article] A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries2011
- Author(s)
  Uehara H., Iwasaki Y., Wada C., Ikemura T., Abe T.
- Journal Title
  
  Genes & Genetic Systems
  
  Volume: 86 Pages: 53-66
- NAID
  10029516253
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] tRNADB-CE 2011 : tRNA gene database curated manually by experts2011
- Author(s)
  Abe T., Ikemura T., et.al.
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 39
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case2011
- Author(s)
  Iwasaki Y., Abe T., Wada K., Itoh M., Ikemura T.
- Journal Title
  
  DNA Research
  
  Volume: 18 Pages: 125-136
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences2011
- Author(s)
  Iwasaki Y., Wada K., Itoh M., Ikemura T., Abe T.
- Journal Title
  
  WSOM 2011(J.Laaksonen and T.Honkela (Eds.))
  
  Volume: LNCS6731 Pages: 198-206
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated2009
- Author(s)
  T.Abe, S.Kanaya, T.Ikemura
- Journal Title
  
  J.C.Principe and R.Miikkulainen(Eds.) : WSOM2009 LNCS 5629
  
  Pages: 1-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated.2009
- Author(s)
  T. Abe s. Kanaya, T. Ikemura
- Journal Title
  
  Proceedings of Workshop 2009 on Self-Organizing Maps accepted
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers.2009
- Author(s)
  T.Abe, Y.Hamano, S.Kanaya, K.Wada, T.Ikemura
- Journal Title
  
  J.Cabestany, et al. (Eds. ) : IWANN2009 Part I, LNCS 5517
  
  Pages: 829-836
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Intra-Species Diversity between Seven Bifidobacterium adolescentis Strains Identified by Genome-Wide Tiling Array Analysis2009
- Author(s)
  K.Yasui, M.Tabata, S.Yamada, T.Abe, T.Ikemura, R.Osawa, T.Suzuki
- Journal Title
  
  Biosci.Biotechnol.Biochem. 73
  
  Pages: 1422-1424
- NAID
  10027542817
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Role of Glucocorticoid Receptor in the Regulation of Cellular Sensitivity to Irinotecan Hydrochloride2009
- Author(s)
  T. Akagi, T. Fukagawa, Y. Kage, H. To, N. Matsunaga, S. Koyanagi, A. Uchida, A. Fujii, H. Iba, T. Ikemura, H. Aramaki, S. Higuchi, S.
- Journal Title
  
  Journal of Pharmacological Sciences
  
  Volume: 109(2) Issue: 2 Pages: 265-274
- DOI
  10.1254/jphs.08219fp
  10.1254/jphs.08219FP
- NAID
  10025734592
- ISSN
  1347-8613, 1347-8648
- Language
  English
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers.2009
- Author(s)
  T. Abe, Y. Hamano, S. Kanaya, K. Wada, T. Ikemura
- Journal Title
  
  Proceedings of the 10th International Work Conference on Artificial Neural Networks accepted
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A novel bioinformatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses2009
- Author(s)
  T.Abe, S.Kanaya, H.Uehara, T.Ikemura
- Journal Title
  
  DNA Research 16
  
  Pages: 287-298
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] tRNADB-CE : tRNA gene database curated manually by experts2009
- Author(s)
  T. Abe, T. Ikemura, Y. Ohara, H. Uehara, M. Kinouchi, S. Kanaya, Y. Yamada A. Muto, H Inokuchi
- Journal Title
  
  Nucleic Acids Research Vol. 37, Databaseissue
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Database for Genes Contributing to Sustainable World2008
- Author(s)
  Uehara, H., Tanahashi, K., Abe, T., Ikemura, T.
- Journal Title
  
  CICSJ Bulletin 26
  
  Pages: 17-19
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法による新規情報学的手法の開発2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 31-33
- NAID
  130000091022
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/2/26_31/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] 公的データペースからの有用遺伝子の発掘 : 持続可能型社会への貢献遺伝子データベースの構築と世界最高水準スーパーコンピュータの利用2008
- Author(s)
  池村淑道, 上原啓史, 棚橋佳世, 阿部貴志
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 40-44
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] 持続可能型社会への貢献遺伝子データベース2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Journal Title
  
  CICSJ Bulletin(日本化学会情報化学部会誌) 26
  
  Pages: 17-19
- NAID
  130000091033
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] ライフサイエンス分野のデータベース:学部学生とシニア世代の共同作業としての知識発見の可能性も含めて2008
- Author(s)
  池村淑道
- Journal Title
  
  CICSJ Bulletin(日本化学会情報化学部会誌) 26
  
  Pages: 1-4
- NAID
  130000091029
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] 公的データベースからの有用遺伝子の発掘:持続可能型社会への貢献遺伝子データベースの構築と世界最高水準スーパーコンピュータの利用2008
- Author(s)
  池村淑道, 上原啓史, 棚橋佳世, 阿部貴志
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 40-44
- NAID
  130000091025
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/2/26_40/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] 持続可能型社会への貢献遺伝子データベース2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 17-19
- NAID
  130000091033
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/1/26_17/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] 持続可能型社会への貢献遺伝子データペース2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 17-19
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] An establishment of informatics method for an effective knowledge discovery from a massive amount of genomic sequences2008
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Journal Title
  
  CICSJ Bulletin 26
  
  Pages: 20-22
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 20-22
- NAID
  130000091034
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法による新規情報学的手法の開発2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 31-33
- NAID
  130000091022
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  CICSJ Bulletin(日本化学会情報化学部会誌) 26
  
  Pages: 20-22
- NAID
  130000091034
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  CICSJ Bulletin(日本化学会情報化学部会誌) 26
  
  Pages: 20-22
- NAID
  130000091034
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 20-22
- NAID
  130000091034
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/1/26_20/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Self-Organizing Maps-its development and application2007
- Author(s)
  Abe, T., Ikemura, T., Kinouchi, M., Nakamura, Y., Maeno, H., Kanaya, S.
- Journal Title
  
  Springer Japan
  
  Pages: 12-12
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Self-Organizing Maps-its development and application2007
- Author(s)
  Matsuura, Y., Abe, T., Ikemura, T., Tokutaka, H., Ohkita, M.
- Journal Title
  
  Springer Japan
  
  Pages: 5-5
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Bisulfite sequencing and dinucleotide content analysis of 15 imprinted mouse differentially methylated regions (DMRs) : paternally methylated DMRs contain less CpGs than maternally methylated DMRs2006
- Author(s)
  Kobayashi, H., Suda, C., Abe, T., Kohara, Y., Ikemura, T., Sasaki, H.
- Journal Title
  
  Cytogenet Genome Res. 113
  
  Pages: 130-137
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Self-Organizing Map (SOM) unveils and visualizes hidden sequence characteristics of a wide range of eukaryote genomes2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S. and Ikemura, T
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes.2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
  
  Pages: 103-112
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes.2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
  
  Pages: 103-112
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A large-scale Self-Organizing Map(SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Sequences from almost all prokaryotic, eukaryotic, and viral genomes available could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] Sequences from almost all prokaryotic, eukaryotic, and viral genomes available could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Research Signpost, Chromatin and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Kosaka, Y., Ikemura, T.
- Journal Title
  
  DNA Structure
  
  Pages: 16-16
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S. and Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
  
  Pages: 103-112
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouch, M., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Sequences from almost all prokaryotic, eukaryotic, and viral genomes available could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator,2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] Self-Organizing Map(SOM) unveils and visualizes hidden sequence characteristics of a wide range of eukaryote genomes2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Sequences from almost all prokaryotic,eukaryotic,and viral genomes a vailable could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S. and Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A large-scale Self-Organizing Map (SOM) constructed with the Earth Simulator unveils sequence characteristics of a wide range of eukaryotic genomes.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Matsuura, Y., Tokutaka, H., Ikemura, T.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps 2005
  
  Pages: 187-194
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] Direct cloning of genes encoding novel xylanases from humangut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 51
  
  Pages: 251-259
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes.2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology (In press)
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 51
  
  Pages: 251-259
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 51
  
  Pages: 251-259
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes.2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T, Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A novel bioinformatics strategy for phylogenetic study of genomic sequence fragments : Self-Organizing Map (SOM) of oligonucleotide frequencies,2005
- Author(s)
  Abe, T.Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps, 2005
  
  Pages: 669-676
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 57
  
  Pages: 251-259
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A large-scale Self-Organizing Map (SOM) constructed with the Earth Simulator unveils sequence characteristics of a wide range of eukaryotic genomes2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Matsuura, Y., Tokutaka, H., Ikemura, T.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps
  
  Pages: 187-194
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Torus Self-Organizing Map for Bioinformatics2005
- Author(s)
  Horata, S., Ikemura, T., Yukawa
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps 2005
  
  Pages: 235-242
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] GeneLook : a novel ab initio gene identification system suitable for automated annotation of prokaryotic sequences2005
- Author(s)
  Nishi, T., Ikemura, T., Kanaya, S.
- Journal Title
  
  Gene 346
  
  Pages: 115-125
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology (In press)
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] Torus Self-Organizing Map for Bioinformatics,2005
- Author(s)
  Horata, S., Ikemura, T., Yukawa
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing maps 2005
  
  Pages: 235-242
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A novel bioinformatics strategy for phylogenetic study of genomic sequence fragments : Self-Organizing Map (SOM) of oligonucleotide frequencies2005
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps
  
  Pages: 669-676
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Torus Self-Organizing Map for Bioinformatics2005
- Author(s)
  Horata, S., Ikemura, T., Yukawa
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps 2005
  
  Pages: 235-242
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes.2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from unchltured micobe mixtures in environmental and clinical samples.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A novel bioinformatics strategy for phylogenetic study of genomic sequence fragments : Self-Organizing Map (SOM) of oligonucleotide frequencies,2005
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Workshop 2005 Self-Organizing Maps 2005
  
  Pages: 669-676
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Genome informatics for unveiling hidden genome signatures2004
- Author(s)
  Abe, T., Kanaya, S., Kinouchi, M., Ikemura, T.
- Journal Title
  
  Proceedings of the Institute of Statistical Mathematics 52
  
  Pages: 207-215
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] Novel genome informatics for unveiling hidden signatures in genome sequences : self-organizing map (SOM) of oligonucleotide frequencies2004
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Information-Based Induction Sciences
  
  Pages: 94-99
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] Amplicons on human chromosome 11q are located in the early/late-switch regions of replication timing.2004
- Author(s)
  Watanabe, Y, Ikemura, T., Sugimura, H.
- Journal Title
  
  Genomics 84
  
  Pages: 796-805
- Data Source
  KAKENHI-PROJECT-16510144
[Journal Article] Genome informatics for unveiling hidden genome signatures2004
- Author(s)
  Abe, T., Kanaya, S., Kinouchi, M., Ikemura, T.
- Journal Title
  
  Proceedings of the Institute of Statistical Mathematics 52
  
  Pages: 207-215
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Novel genome informatics for unveiling hidden signatures in genome sequences : self-organizing map (SOM) of oligonucleotide frequencies2004
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Information-Based Induction Sciences
  
  Pages: 94-99
- Data Source
  KAKENHI-PROJECT-16570190
[Presentation] 宿主細胞特異的な環境に依存した SARS-CoV-2 連続塩基組成の変化2021
- Author(s)
  岩﨑裕貴、阿部貴志、池村淑道
- Organizer
  第 15 回日本ゲノム微生物学会年会
- Data Source
  KAKENHI-PROJECT-18K07151
[Presentation] Time-series analysis of directional sequence changes in SARS-CoV-2 genomes and an unsupervised explainable AI for studying corona virus genomes2020
- Author(s)
  Toshimichi Ikemura
- Organizer
  International Symposium on Data Science
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K07151
[Presentation] An AI strategy for detecting HGT relies on nucleotide compositional features.2019
- Author(s)
  Takashi Abe, Yu Akazawa, Tomoya Baba, Toshimichi Ikemura.
- Organizer
  第42回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-17K00401
[Presentation] ヒトゲノムに見られるMb規模のCpGとTFBS islandsとそれらの構造と機能2019
- Author(s)
  和田　健之介、和田　佳子、池村　淑道
- Organizer
  日本遺伝学会第91回大会
- Data Source
  KAKENHI-PROJECT-18K07151
[Presentation] AI に導かれた感染症RNA ウィルスの分子進化研究2018
- Author(s)
  和田健之介、和田佳子、池村淑道
- Organizer
  日本遺伝学会　第90回大会
- Invited
- Data Source
  KAKENHI-PROJECT-18K07151
[Presentation] 自己圧縮 BLSOM (SC-BLSOM)を用いた連続塩基組成に基づくメタゲノム解析法の確立2018
- Author(s)
  小川優太、池村淑道、阿部貴志
- Organizer
  第12回日本ゲノム微生物学会年会
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] ゲノムのビッグデータからのAIによる想定外の知識発見とその進化学への応用2018
- Author(s)
  池村淑道、和田佳子、和田健之介
- Organizer
  第２回木村資生記念進化学セミナー
- Invited
- Data Source
  KAKENHI-PROJECT-18K07151
[Presentation] 時系列解析とAIを用いた感染症RNAウィルス増殖に関与する宿主 miRNAの推定2018
- Author(s)
  和田健之介、和田佳子、池村淑道
- Organizer
  日本進化学会第20回大会
- Data Source
  KAKENHI-PROJECT-18K07151
[Presentation] AI が明らかにした病原性 RNA ウイルスゲノムの方向性と再現性のある変化と薬効性の失われ難い核酸医薬設計2018
- Author(s)
  池村淑道、和田健之介、和田佳子、岩崎裕貴
- Organizer
  第12回日本ゲノム微生物学会年会
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] SINE領域によるクロマチンの高次構造の構築による遺伝子発現調節機構2017
- Author(s)
  岩﨑裕貴、池村淑道、黒川顕、岡田典弘
- Organizer
  日本進化学会　第19回大会
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] TFIIICを基礎とした転写因子群の特徴抽出及びinsulator活性を含む遺伝子発現調節機構メカニズム2017
- Author(s)
  岩﨑裕貴、池村淑道、黒川顕、岡田典弘
- Organizer
  日本進化学会　第19回大会
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] AIに導かれた病原性RNAウイルスの分子進化研究2017
- Author(s)
  和田健之介、和田佳子、岩崎裕貴、池村淑道
- Organizer
  日本進化学会　第19回大会
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] 人類に脅威を与えるRNAウイルス類の弱みをAIで探る：薬効が失われ難いsiRNAのデザイン2017
- Author(s)
  池村淑道、和田佳子、岩崎裕貴、和田健之介
- Organizer
  日本ゲノム微生物学会第１１回年会
- Place of Presentation
  慶応大学藤沢キャンパス　（神奈川県藤沢市）
- Year and Date
  2017-03-02
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] エボラ・インフルエンザウイルスの方向性のあるゲノム配列変化2016
- Author(s)
  和田佳子, 和田健之介, 岩崎裕貴, 金谷重彦, 池村淑道
- Organizer
  第10回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Year and Date
  2016-03-04
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] 大量RNAウイルスゲノム配列のビッグデーダ解析が可能にする新規性の高い分子進化学2016
- Author(s)
  和田佳子、和田健之介、岩崎裕貴、金谷重彦、池村淑道
- Organizer
  日本進化学会第18回年会
- Place of Presentation
  東京工業大学　大岡山キャンパス（東京都目黒区）
- Year and Date
  2016-08-25
- Invited
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] ビッグデータを活用した予言<->検証の速やかなサイクルを可能にする分子進化学2016
- Author(s)
  和田佳子、和田健之介、岩崎裕貴、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第88回大会
- Place of Presentation
  日本大学国際関係学部　（静岡県三島市）
- Year and Date
  2016-09-07
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] メタゲノム配列群からの自動クラスタ抽出法の開発2016
- Author(s)
  石田恭平，池村淑道，阿部貴志
- Organizer
  第10回日本ゲノム微生物学会年会
- Place of Presentation
  神戸
- Year and Date
  2016-03-04
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] オリゴヌクレオチドのビッグデータ解析が検出する人獣共通感染症RNAウイルスゲノムの方向性のある変化2015
- Author(s)
  池村淑道, 和田佳子, 岩崎裕貴, 和田健之介, 金谷重彦
- Organizer
  第87回日本遺伝学会
- Place of Presentation
  仙台
- Year and Date
  2015-09-24
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] 自己圧縮BLSOM（一括学習型自己組織化マップ）による水平伝播領域検出法の開発2015
- Author(s)
  松本光司，菊池亮仁，池村淑道，阿部貴志
- Organizer
  第87回日本遺伝学会
- Place of Presentation
  仙台
- Year and Date
  2015-09-24
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] オリゴペプチド組成類似性に基づく機能未知のタンパク質の機能推定法の確立2015
- Author(s)
  五十嵐諒，池村淑道，阿部貴志
- Organizer
  第87回日本遺伝学会
- Place of Presentation
  仙台
- Year and Date
  2015-09-24
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] Bioinformatics Studies of Microorganism Genomes for Extreme Environmental Adaptations2015
- Author(s)
  阿部貴志, 馬場知哉, 池村淑道, 仁木宏典
- Organizer
  第6回極域科学シンポジウム
- Place of Presentation
  東京
- Year and Date
  2015-11-16
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] Big data bioinformatics for designing therapeutic oligonucleotides for ebolavirus disease.2015
- Author(s)
  Yoshiko Wada, Kennosuke Wada, Daisuke Isoda, Yuki Iwasaki, Shigehiko Kanaya and Toshimichi Ikemura.
- Organizer
  Taskforce Infectious Disease: Ebola Paris 2015
- Place of Presentation
  Institut Pasteur - Paris, France
- Year and Date
  2015-05-28
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] Big data analyses on genome sequences with special focus on oligonucleotide word count2015
- Author(s)
  Toshimichi Ikemura
- Organizer
  ISM High Performance Computing Conference
- Place of Presentation
  Tokyo, Japan
- Year and Date
  2015-10-09
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] メタゲノム配列群集からのウイルスゲノムの検出と系統推定手法の開発2015
- Author(s)
  佐藤研朗，池村淑道，阿部貴志
- Organizer
  第38回日本分子生物学会年会
- Place of Presentation
  神戸
- Year and Date
  2015-12-01
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] BLSOM解析を活用したマダニ媒介性病原体の検索2013
- Author(s)
  中尾亮、阿部貴志、山本正悟、Nijhof Ard、Jongejan Frans、池村淑道、杉本千尋
- Organizer
  第7回日本ゲノム微生物学会年会
- Place of Presentation
  長浜バイオ大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] インフルエンザウイルスゲノムの宿主環境に依存したgenome signatureの変化に関する新規情報解析2013
- Author(s)
  岩﨑裕貴、阿部貴志、和田健之介、和田佳子、米澤弘毅、池村淑道
- Organizer
  日本進化学会第15回つくば大会
- Place of Presentation
  筑波大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] RNAウイルスと宿主因子の相互作用を検出するための手法の開発2013
- Author(s)
  小倉歩、馮麗利、岩﨑裕貴、阿部貴志、和田健之介、和田佳子、池村淑道
- Organizer
  第7回日本ゲノム微生物学会年会
- Place of Presentation
  長浜バイオ大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] BLSOMを利用したtRNA遺伝子の特徴抽出2013
- Author(s)
  池村淑道、岩崎裕貴、三宅雄大、和田健之介、和田佳子、山田優子、武藤昱、井口八郎、阿部貴志
- Organizer
  第7回日本ゲノム微生物学会年会
- Place of Presentation
  長浜バイオ大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] インフルエンザウイルスゲノムの宿主環境に依存したgenome signatureの変化の方向性及びそこからの変異予測を行うための新規情報解析2013
- Author(s)
  岩﨑裕貴、阿部貴志、和田健之介、和田佳子、米澤弘毅、池村淑道
- Organizer
  第61回ウイルス学会学術集会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 一括学習型自己組織化マップ (BLSOM) 法と学習ベクトル量子化 (LVQ) 法を組み合わせたインフルエンザウイルスゲノムからの特徴抽出2013
- Author(s)
  金田卓馬、岩﨑裕貴、池村淑道、阿部貴志
- Organizer
  第61回ウイルス学会学術集会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] Novel bioinformatics strategies to analyze influenza virus genome signature and its evolution from massive viral genome sequences, using Batch-Learning Self Organizing Map (BLSOM).2013
- Author(s)
  Yuki Iwasaki, Takashi Abe, Kennosuke Wada, Yoshiko Wada, Kouki Yonezawa and Toshimichi Ikemura
- Organizer
  SMBE2013
- Place of Presentation
  Chicago, USA
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] Novel bioinformatics strategies to analyze massive influenza virus genome sequences using Batch-Learning Self Organizing Map (BLSOM).2013
- Author(s)
  池村淑道、岩崎裕貴
- Organizer
  The 17th International Annual Symposium on Computational Science and Engineering
- Place of Presentation
  Khon Kaen University（タイ王国）
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] インフルエンザウイルスRNAゲノムの宿主適応に関連したgenome signatureの変化に関する新規情報解析2013
- Author(s)
  岩﨑裕貴、阿部貴志、和田健之介、和田佳子、米澤弘毅、池村淑道
- Organizer
  第15回RNA学会年会
- Place of Presentation
  愛媛
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] メタゲノム解析による活性汚泥中の微生物群集構造の解明2012
- Author(s)
  阿部貴志、中田俊芳、佐藤修正、平川英樹、近藤昭宏、杉本千尋、池村淑道
- Organizer
  第6回日本ゲノム微生物学会年会
- Year and Date
  2012-03-12
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] RNAウイルスの宿主依存機構に関連したウイルスゲノム進化2012
- Author(s)
  岩崎裕貴、秋葉太貴、小倉歩、阿部貴志、和田健之介、池村淑道
- Organizer
  日本進化学会第14回大会
- Place of Presentation
  首都大学東京
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] A Novel Bioinformatics Study of Oligonucleotide and Peptide Compositions in Influenza Virus Genomes in the Context to Its Host Adaptation2012
- Author(s)
  岩崎裕貴, 阿部貴志, 和田健之介, 伊藤正恵, 池村淑道
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  福岡国際会議場
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] RNA ウイルスの宿主依存機構の解明を目的とした宿主由来RNA との類似領域の検出2012
- Author(s)
  岩崎裕貴、和田健之介、秋葉太貴、小倉歩、阿部貴志、池村淑道
- Organizer
  日本遺伝学会第84回大会
- Place of Presentation
  九州大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] メタゲノム解析による活性汚泥中の微生物群集構造の解明2012
- Author(s)
  阿部貴志、杉本千尋、池村淑道, 他
- Organizer
  第6回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Year and Date
  2012-03-12
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 新規情報学的手法を用いた膨大な量のインフルエンザウイルスゲノムからの特徴抽出2012
- Author(s)
  岩崎裕貴、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] tRNADB-CEで公開した全tRNA遺伝子を対象とした自己組織化マップ解析2012
- Author(s)
  岩崎裕貴、阿部貴志、池村淑道, 他
- Organizer
  第6回日本ゲノム微生物学会年会
- Place of Presentation
  東京(口頭)
- Year and Date
  2012-03-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] RNAウイルスの宿主依存機構を知るための宿主RNAとの類似領域の検出2012
- Author(s)
  岩崎裕貴、秋葉太貴、小倉歩、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  第14回日本RNA学会年会
- Place of Presentation
  東北大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 新規情報学的手法を用いた膨大な量のインフルエンザウイルスゲノムからの特徴抽出2012
- Author(s)
  岩崎裕貴、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  第6回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Year and Date
  2012-03-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A novel Bioinformatics Study of tRNA Genes Registered in tRNADB-CE ( http://trna.nagahama-i-bio.ac.jp )2012
- Author(s)
  池村淑道, 岩崎裕貴, 三宅雄大, 和田健之介, 山田優子, 武藤あきら
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  福岡国際会議場
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences2011
- Author(s)
  Iwasaki Y., Wada K., Itoh M., Ikemura T., Abe T.
- Organizer
  Workshop on Self-Organizing Map 2011
- Place of Presentation
  Espoo, Finland
- Year and Date
  2011-06-15
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A novel bioinformatics strategy to investigate sequence characteristics in influenza virus genomes related with their host-adaptaion mechanisms2011
- Author(s)
  岩崎裕貴、池村淑道、和田健之介、伊藤正恵、阿部貴志
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 新規情報学的手法を用いたヒト腸内ならびに環境メタゲノム配列群からの効率的な知識発見2011
- Author(s)
  阿部貴志、上原啓史、金谷重彦、池村淑道
- Organizer
  第151回日本獣医学会学術集会
- Place of Presentation
  東京
- Year and Date
  2011-03-31
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] tRNADB-CE : tRNA gene database curated manually by experts2011
- Author(s)
  T.Abe, T.Ikemura, et al
- Organizer
  RNA 2011
- Place of Presentation
  Kyoto, Japan
- Year and Date
  2011-06-17
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化マップ(BLSOM)を用いた環境由来メタゲノム配列からの環境微生物群集構造の推定2011
- Author(s)
  大井学、岩崎裕貴、和田健之介、池村淑道、阿部貴志
- Organizer
  第5回日本ゲノム微生物学会年会
- Year and Date
  2011-03-16
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 新規情報学的手法を用いた宿主適応に関連したインフルエンザウイルスゲノムの進化学的解析2011
- Author(s)
  岩崎裕貴、池村淑道、和田健之介、伊藤正恵、阿部貴志
- Organizer
  日本遺伝学会第3回大会
- Place of Presentation
  京都
- Year and Date
  2011-09-20
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A novel evolutionary study to predict directional changes of influenza A virus genome sequences2011
- Author(s)
  Yuki Iwasaki, Kennosuke Wada, Masae Itoh, Takashi Abe, and Toshimichi Ikemura
- Organizer
  SMBE 2011
- Place of Presentation
  Kyoto Japan
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 転移RNA遺伝子データベース"tRNADB-CE"を用いた転移RNA二次構造のin silico大規模解析2011
- Author(s)
  井口八郎、池村淑道、武藤あきら、山田優子、阿部貴志
- Organizer
  日本遺伝学会第3回大会
- Place of Presentation
  京都
- Year and Date
  2011-09-21
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化マップによるメタゲノム配列群を対象とした環境微生物群衆構造推定法の開発2011
- Author(s)
  阿部貴志、大井学、上原啓史、岩崎裕貴、和田健之介、池村淑道
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] tRNADB-CE:エキスパートがキュレートしたtRNA遺伝子データベース2011
- Author(s)
  阿部貴志、池村淑道, 他
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A novel bioinformatics study of Influenza virus genomes focusing on sequence difference between strains isolated from different host sources2011
- Author(s)
  Iwasaki Y., Ikemura T., Wada K., Itoh M., Abe T.
- Organizer
  IUMS 2011
- Place of Presentation
  Sapporo, Japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 新規情報学的手法を用いた宿主適応に関連したインフルエンザウイルスゲノムの進化学的解析2011
- Author(s)
  岩崎裕貴、池村淑道、和田健之介、伊藤正恵、阿部貴志
- Organizer
  日本遺伝学会大会
- Place of Presentation
  京都
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] A novel bioinformatics study of Influenza virus genomes focusing on sequence difference between strains isolated from different host sources.2011
- Author(s)
  Yuki Iwasaki, Toshimichi Ikemura, kennosuke Wada, Masae Itoh and Takashi Abe
- Organizer
  IUMS 2011
- Place of Presentation
  Sapporo, Japan
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences2011
- Author(s)
  Yuki Iwasaki, Kennosuke Wada, Masae Itoh, Toshimichi Ikemura, and Takashi Abe
- Organizer
  Workshop on Self-Organizing Map 2011
- Place of Presentation
  Espoo, Finland
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 一括学習型自己組織化マップ法によるメタゲノム配列解析を対象にした環境微生物群集構造の解明2010
- Author(s)
  阿部貴志, 大井学, 伊藤輝二, 岡田和典, 岩崎裕貴, 和田健之介, 金谷重彦, 池村淑道
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸
- Year and Date
  2010-12-08
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部教育としての健康への貢献遺伝子データベース～抗生物質生産遺伝子を中心とした遺伝子探索～2010
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第4回日本ゲノム微生物学会
- Place of Presentation
  福岡
- Year and Date
  2010-03-07
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 環境ゲノム資源からの環境改善に役立つ有用タンパク質遺伝子の新規情報学的な手法による探索2010
- Author(s)
  上原啓史, 和田千惠子, 中泉友紀, 岩崎裕貴, 池村淑道, 阿部貴志
- Organizer
  日本遺伝学会第82回大会
- Place of Presentation
  札幌
- Year and Date
  2010-09-20
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] オリゴペプチド組成に基づく一括学習型自己組織化マップ(BLSOM)法を用いた機能未知のタンパク質類の機能推定法の確立2010
- Author(s)
  阿部貴志, 上原啓史, 金谷重彦, 池村淑道
- Organizer
  第4回日本ゲノム微生物学会
- Place of Presentation
  博多
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Knowledge discovery and database construction for Genes Contributing to "Sustainable World" and Human Health2010
- Author(s)
  H. Uehara, T. Ikemura, H. Inokuchi, C. Wada, Y. Yamada, A. Muto, Y. Ohara, T. Abe
- Organizer
  Biocuration 2010
- Place of Presentation
  Okinawa, Japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 環境ゲノム資源からの環境改善に役立つ有用タンパク質遺伝子セットの新規情報学的な手法による探索2010
- Author(s)
  上原啓史, 和田千惠子, 中泉友紀, 古田亜耶乃, 岩崎裕貴, 池村淑道, 阿部貴志
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸
- Year and Date
  2010-12-09
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 全地球レベルの環境微生物多様性を把握・俯瞰するための新規情報学手法の開発2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第11回日本進化学会大会(ポスタ)
- Place of Presentation
  北海道大学(札幌)
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部生シニア世代の共同作業としての「高精度・高機能な遺伝子データベース」の構築とその利用2009
- Author(s)
  阿部貴志、小原康雄、上原啓史、平野晋也、木ノ内誠、金谷重彦、菅原潤一、金井明夫、山田優子、武藤〓、井口八郎、池村淑道
- Organizer
  日本遺伝学会第18回大会(口頭)
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental michobe mixtures and functions of metagenome sepuences using Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T.Abe, S.Kanaya, T.Ikemura
- Organizer
  International Symposium on Marine Genomics 2009(Oral)
- Place of Presentation
  Okinawa, Japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 健康への貢献ならびに持続可能型社会への貢献遺伝子データベース2009
- Author(s)
  上原啓史, 阿部貴志, 中泉夕紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化地図法による全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2009
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化地図法による全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T. Abe, S. Kanaya, T. Ikemura
- Organizer
  Xth SCAR International Biology Symposium
- Place of Presentation
  Hokkaido Univ., Sapporo
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部教育としての「健康」ならびに「持続可能型社会」への貢献遺伝子データベース構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第82回日本生化学会大会(ポスタ).
- Place of Presentation
  ポートアイランド(神戸)
- Year and Date
  2009-10-23
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 健康への貢献ならびに持続可能型社会への貢献遺伝子データベース2009
- Author(s)
  上原啓史, 阿部貴志, 中泉夕紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型自己組織化マップ法2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2009-12-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] オリゴヌクレオチド組成を用いた一括学習型自己組織化地図法によるA型インフルエンザウイルスの俯瞰的な特徴解明2009
- Author(s)
  岩崎裕貴、池村淑道、伊藤正恵、阿部貴志
- Organizer
  第18回バイオ情報学研究会(口頭).
- Place of Presentation
  北海道大学(札幌)
- Year and Date
  2009-09-17
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T.Abe, S.Kanaya, T.Ikemura
- Organizer
  Xth SCAR International Biology Symposium, (Poster)
- Place of Presentation
  Hokkaido Univ., Sapporo
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A型インフルエンザウイルスの全ゲノム配列を対象とした一括学習型自己組織化マップ法(BL-SOM)による効率的な知識発見とその応用2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、和田健之介、池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ).
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部生とシニア世代の共同作業としての"健康への貢献遺伝子データベース"構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ).
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部教育としての健康ならびに持続可能型社会への貢献の下遺伝子データベース構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  統合データベースプロジェクトンポジウム2009(ポスタ).
- Place of Presentation
  東京大学(東京)
- Year and Date
  2009-06-12
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 全インフルエンザAウィルスを対象にした新規情報学的手法による俯瞰的可視化とそにからの知識発見2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、和田健之介、池村淑道
- Organizer
  日本遺伝学会第18回大会(口頭).
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-18
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 環境微生物ゲノム配列からのお宝遺伝子発掘の学部や高校教育における活用2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  日本遺伝学会第18回大会(口頭)
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures and functions of metagenome sequences using Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T. Abe, S. Kanaya, T. Ikemura
- Organizer
  International Symposium on Marine Genomics 2009
- Place of Presentation
  Okinawa,japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A型インフルエンザウイルスの全ゲノム配列を対象とした新規情報学的手法による俯瞰的可視化とそこからの効率的知識発見2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、池村淑道
- Organizer
  第57回日本ウイルス学会学術集会(ポスタ).
- Place of Presentation
  都市センターホテル(東京)
- Year and Date
  2009-10-25
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 全地球レベルの環境微生物多様性を把握・俯瞰するための新規情報学手法の開発2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第11回日本進化学会大会
- Place of Presentation
  北海道
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型自己組織化マップ法2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ).
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 持続可能型社会ならびに健康への貢献遺伝子データベース2008
- Author(s)
  上原啓史、阿部貴志、棚橋佳世、陳キン、陸嘉俊、田中秀和、池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化地図法(Batch Learning Self-Organizing Map : SOM)による環境微生物ゲノム群集の解明2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋大学、名古屋
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A novel bioinformatics strategy for prediction of functions of a massive amount of poorly-characterized protein genes obtained by metagenome studies2008
- Author(s)
  T. Abe, S. Kanaya, H. Uehara, T. Ikemura
- Organizer
  XX International Congress of Genetics
- Place of Presentation
  the International Congress Centrum, Berlin. Germany
- Year and Date
  2008-07-17
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 世界最高水準スーパーコンピュータで可能になる、全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  バイオスーパーコンピューティング・シンポジウム(BSCS) 2008
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 世界最高水準スーパーコンピュータで可能になる、全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  バイオスーパーコンピューティング・シンポジウム(BSCS)2008
- Place of Presentation
  MY PLAZA ホール、東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Phylogenetic characterization of non-rRNA sequences from uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map (BLSOM).2008
- Author(s)
  T. Abe, H. Sugawara, S. Kanaya, T. Ikemura
- Organizer
  XXXI Symposium on Polar Biology
- Place of Presentation
  The National Institute of Polar Research, Tokyo, Japan
- Year and Date
  2008-12-03
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化地図法(Batch Learning Self-Organizing Map : SOM)による環境微生物ゲノム群集の解明2008
- Author(s)
  池村淑道
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 持続可能型社会への貢献遺伝子データベース〜膨大な環境由来メタゲノム配列からの有用遺伝子探索2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Organizer
  第2回日本ゲノム微生物学会年会
- Place of Presentation
  大阪
- Year and Date
  2008-03-06
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] 一括学習型自己組織化地図法(Batch-Learning Self-Organizing Map : BLSOM)による環境生物ゲノム由来断片配列からの知識発見2008
- Author(s)
  阿部貴志, 金谷重彦, 池村叔道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 持続可能型社会ならびに健康への貢献遺伝子データペース2008
- Author(s)
  上原啓史, 阿部貴志, 棚橋佳世, 陳キン, 陸嘉俊, 田中秀和, 池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Database for Genes Contributing to Sustainable World : retrieval of useful genes from a massive amount of environmental sequences obtained by large-scale metagenome analyses.2008
- Author(s)
  Uehara, H., Tanahashi, K., Abe, T., Ikemura, T.
- Organizer
  The 2nd Annual Meeting for the Society of Genome Microbiology, Japan
- Place of Presentation
  Osaka
- Year and Date
  2008-03-06
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 一括学習型自己組織化地図法(Batch-Learning Self-Organizing Map : BLSOM)による環境生物ゲノム由来断片配列からの知識発見2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 持続可能型社会への貢献遺伝子データベース〜膨大な環境由来メタゲノム配列からの有用遺伝子探索2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Organizer
  第2回日本ゲノム微生物学会年会
- Place of Presentation
  大阪
- Year and Date
  2008-03-06
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 持続可能型社会への貢献遺伝子データベースの構築2007
- Author(s)
  棚橋佳世, 上原啓史, 阿部貴志, 池村淑道
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-11
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Database for Genes Contributing to Sustainable World.2007
- Author(s)
  Tanahashi, K., Uehara, H., Abe, T., Ikemura, T.
- Organizer
  The 30th Annual Meeting for the Molecular Society of Japan
- Place of Presentation
  Yokohama
- Year and Date
  2007-12-11
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 公的データベースからの新規遺伝子の発掘:持続可能型社会への貢献遺伝子データベースの構築2007
- Author(s)
  池村淑道
- Organizer
  化学と生物学を統合する情報学に関するシンポジウム
- Place of Presentation
  東京
- Year and Date
  2007-12-07
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 超大型スーパーコンピュータで可能になるゲノム情報に基づく生物の俯瞰的把握と環境ゲノム資源活用のための情報学的手法確立2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  次世代スーパーコンピューティング・シンポジウム2007
- Place of Presentation
  東京
- Year and Date
  2007-10-03
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Retrieval of novel genes from the public DNA Sequence Databanks : establishment of the Database for Genes Contributing to Sustainable World.2007
- Author(s)
  Ikemura, T.
- Organizer
  The Symposium on Information Science to Integrate Chemistry with Biology
- Place of Presentation
  Tokyo
- Year and Date
  2007-12-07
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] A novel bioinformatics strategy for unveiling microbial diversity of uncultured microbe mixtures on the basis of Batch-Learning Self-Organizing Map (BLSOM)2007
- Author(s)
  Takashi Abe, Shigehiko Kanaya and Toshimichi Ikemura
- Organizer
  The 7th International Workshop on Advanced Genomics
- Place of Presentation
  Tokyo
- Year and Date
  2007-11-27
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップの開発2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Batch-Learning Self-Organizing Map for estimating functions of function-unknown proteins being increasingly accumulated in databases.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  The 30th Annual Meeting for the Molecular Society of Japan
- Place of Presentation
  Yokohama
- Year and Date
  2007-12-14
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型の自己組織化マップ法2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回日本分子生物学会年会2007年12月14日
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 学部教育としての持続可能型社会への貢献遺伝子データベース構築2007
- Author(s)
  上原啓史, 阿部貴志, 棚橋佳世, 中原拓, 大島一彦, 池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法の開発2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回情報化学討論会,
- Place of Presentation
  京都
- Year and Date
  2007-11-15
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 持続可能型社会への貢献遺伝子データベースの構築2007
- Author(s)
  棚橋佳世, 上原啓史, 阿部貴志, 池村淑道
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-11
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップの開発2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] オリゴヌクレオチド頻度のSOM解析による真核生物ゲノム配列に潜む生物種による個性の解明2007
- Author(s)
  濱野祐太, 池村淑道, 金谷重彦
- Organizer
  第30回情報化学討論会
- Place of Presentation
  京都
- Year and Date
  2007-11-15
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Characterization of Genetic Signal Sequences with Batch-Learning SOM2007
- Author(s)
  T., Abe, S., Ikeda, S., Kanaya, K., Wada and T., Ikemura
- Organizer
  Workshop 2007 on Self-Organizing Maps
- Place of Presentation
  Bielefeld/Germany
- Year and Date
  2007-09-05
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Development of a new informatics method based on SOM for estimating functions of function-unknown proteins being increasingly accumulated in databases.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  The 30th Symposium on Chemical Information and Computer Sciences
- Place of Presentation
  Kyoto
- Year and Date
  2007-11-15
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 公的データベースからの新規遺伝子の発掘:持続可能型社会への貢献遺伝子データベースの構築2007
- Author(s)
  池村淑道
- Organizer
  化学と生物学を統合する情報学に関するシンポジウム
- Place of Presentation
  東京
- Year and Date
  2007-12-07
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Establishment of an informatics method that enables a comprehensive understanding of genome signatures and utilizing the signatures for phylogenetic classification of a massive amount of environmental sequences obtained by metagenome analyses by utilizing high performance supercomputers.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  Next generation super computing symposium 2007
- Place of Presentation
  Tokyo
- Year and Date
  2007-10-03
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型の自己組織化マップ法2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 超大型スーパーコンピュータで可能になるゲノム情報に基づく生物の俯瞰的把握と環境ゲノム資源活用のための情報学的手法確立2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  次世代スーパーコンピューティング・シンポジウム2007
- Place of Presentation
  東京
- Year and Date
  2007-10-03
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Characterization of Genetic Signal Sequences with Batch-Learning SOM.2007
- Author(s)
  Abe, T., Ikeda, S., Kanaya, S., Wada, K., Ikemura, T.
- Organizer
  Workshop 2007 on Self-Organizing Maps
- Place of Presentation
  Bielefeld/Germany
- Year and Date
  2007-09-05
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Elucidation of species-specific characteristics of eukaryote genomes by BL-SOM analysis on oligonucleotide frequency.2007
- Author(s)
  Hamano, Y., Ikemura, T., Kanaya, S.
- Organizer
  The 30th Symposium on Chemical Information and Computer Sciences
- Place of Presentation
  Kyoto
- Year and Date
  2007-11-15
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Establishment of the Database for Genes Contributing to Sustainable World as an activity of undergraduate education.2007
- Author(s)
  Uehara, H., Abe, T., Tanahashi, K., Nakahara, T., Ohshima, K., Ikemura, T.
- Organizer
  The Genetics Society of Japan 79th Annual Meeting
- Place of Presentation
  Okayama
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型の自己組織化マップ法2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回日本分子生物学会年会2007年12月14日
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法の開発2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回情報化学討論会
- Place of Presentation
  京都
- Year and Date
  2007-11-15
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 学部教育としての持続可能型社会への貢献遺伝子データベース構築2007
- Author(s)
  上原啓史, 阿部貴志, 棚橋佳世, 中原拓, 大島一彦, 池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Characterization of Genetic Signal Sequences with Batch-Learning SOM2007
- Author(s)
  Takashi Abe, Shun Ikeda, Shigehiko Kanaya, Kennosuke Wada, and Toshimichi Ikemura
- Organizer
  Workshop 2007 on Self-Organizing Maps
- Place of Presentation
  Bielefeld/Germany
- Year and Date
  2007-09-05
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法の開発2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回情報化学討論会,
- Place of Presentation
  京都
- Year and Date
  2007-11-15
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Development of a new informatics method based on SOM for estimating functions of function-unknown proteins being increasingly accumulated in databases.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  The 79th Annual Meeting of the Genetics Society of Japan
- Place of Presentation
  Okayama
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] ビッグデータ解析によるエボラ、インフルエンザ、エイズウイルス用の核酸医薬のデザイン
- Author(s)
  和田佳子、岩崎裕貴、磯田大典、阿部貴志、和田健之介、池村淑道
- Organizer
  第9回日本ゲノム微生物学会年会
- Place of Presentation
  神戸
- Year and Date
  2015-03-06 – 2015-03-08
- Data Source
  KAKENHI-PROJECT-26330334
[Presentation] Big data bioinformatics for designing therapeutic oligonucleotides for ebolavirus disease.
- Author(s)
  Toshimichi Ikemura
- Organizer
  Paris Ebola 2015
- Place of Presentation
  Institut Pasteur, Paris
- Year and Date
  2015-05-28 – 2015-05-29
- Invited
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 人獣共通感染ウイルスゲノム配列の宿主依存性に関わる特徴抽出法の開発とそれを用いたウイルスゲノム配列の変化方向予測
- Author(s)
  岩崎裕貴、秋葉太貴、小倉歩、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  第1回人獣共通感染症研究拠点シンポジウム
- Place of Presentation
  岐阜大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] ビッグデータ時代の集団進化遺伝学・ゲノム研究のための教師なし学習解析
- Author(s)
  岩崎　裕貴,阿部貴志,和田佳子,和田健之介,池村　淑道
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  滋賀県、長浜市
- Year and Date
  2014-09-17 – 2014-09-19
- Invited
- Data Source
  KAKENHI-PROJECT-26330334

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66. Takashina Maki

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94. 中尾亮

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IKEMURA Toshimichi 池村 淑道

Research Projects

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Co-Researchers

AI-supported studies of RNA viruses

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Development of horizontal gene transfer detection system and elucidation of environmental adaptation and co-evolution process

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Efficient knowledge discovery from life-science big dataPrincipal Investigator

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Study on Developing of a Digital Archives relating to Atomic-Bomb Radiation Effect on Human Body by an International Consortium

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Genomic sequence studies of zoonotic disease viruses including influenza viruses with a novel bioinformatics methodPrincipal Investigator

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Archival Research on the Records Relating to the Former Japanese Colonies, Occupied Territories and the Atomic-Bombs

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Function prediction of poorly-characterized protein genes found in genome sequences with high-performance supercomputers and its publicationPrincipal Investigator

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全ゲノム情報に基づいた病原微生物と常在菌の多様性と病原遺伝子に関する情報学的研究Principal Investigator

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Sequence alignment-free method for phylogenetic and functional prediction and its application to molecular evolutionary studiesPrincipal Investigator

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全ゲノム情報に基づいた病原微生物と常在菌の多様性と病原遺伝子に関する情報学的研究Principal Investigator

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ゲノムに潜むシグナル・モチーフ部品の網羅的探索のための自己組織化地図Principal Investigator

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Comparative analysis of replication timing among human cancer cell lines using microarray

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Bioinformatics strategy for unveiling hidden genome signatures and biodiversityPrincipal Investigator

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IKEMURA Toshimichi 池村淑道