Abe Takashi 阿部貴志

… Alternative Names

Researcher Number	30390628
Other IDs
External Links
Affiliation (Current)	2021: 新潟大学, 自然科学系, 教授
Affiliation (based on the past Project Information) *help	2011 – 2020: 新潟大学, 自然科学系, 准教授 2014: 新潟大学, 自然科学研究科, 准教授 2011: 新潟大学, 工学部・情報工学科, 助教 2007 – 2010: Nagahama Institute for Bio-scienoe and Technology, Department of Bioscience, Assistant Professor 2007: Nagahama Institute of Bio-Science and Technology, 長浜バイオ大学, 助教 … More
Review Section/Research Field	Principal Investigator Applied genomics / Life / Health / Medical informatics / Bioinformatics/Life informatics Except Principal Investigator Biological Sciences / 生理人類学 / Applied veterinary science / Evolutionary biology / ゲノム情報科学 / Bioinformatics/Life informatics / Applied genomics … More
Keywords	Principal Investigator 一括学習型自己組織化マップ / 連続塩基組成 / 系統推定 / タンパク質機能推定 / メタゲノム / 塩基組成 / 連続塩基 / 連続アミノ酸 / 生物系統推定 / メタゲノム解析 … More Except Principal Investigator SOM / 自己組織化マップ / 地球シミュレータ / Self-Organizing Map / メタゲノム / ゲノム配列 / 難培養性微生物 / 生体生命情報学 / SNP / ゲノム / 微生物 / 連続塩基頻度 / 系統推定 / cDNA / phylogenetic classification / oligonucleotide frequencies / 応用微生物 / ウイルス / 環境適応能 / 生理人類学 / リモートセンシング / タンパク質機能推定 / 人獣共通感染症 / 原虫 / 核酸医薬 / 進化 / genome signature / phylogenetic prediction / オリゴヌクレオチド頻度 / uncultured microorganism / environmental microorganism / metagenome / 病原微生物 / 細菌 / 水平伝播遺伝子 / オリゴペプチド頻度 / 3連アミノ酸頻度 / 2連アミノ酸頻度 / 機能未知タンパク / ハプロタイプ / 地球環境変動 / 地球温暖化 / 高性能スーパーコンピュータ / 系統推定分子マーカー / マダニ / アフリカ / インフルエンザ / ゲノム配列解析 / ビッグデータ / オリゴヌクレオチド / エボラ / 連続塩基組成 / バイオインフォマティクス / インフルエンザウイルス / 流行リスク評価 / 宿主依存性 / ゲノム情報処理 / 進化遺伝 / 南極 / コケ坊主 / 北極 / 低温 / 環境適応 / 水平伝播 / 極地 / 特殊環境 / 共生 / 一塩基多型 / ポリジーン / 大気リモートセンシング / Environmental Adaptability / Physiological Anthropology / Remote Sensing / 連続塩基出現頻度 / 地球シュミレータ / oligonucleotide / 環境微生物 / oligonucleotide frequency / the Earth Simulator / transcription factor / uncultured microorganisms / 獣医学 / 感染症 / タイレリア / ショットガン解析 / Genome / Veterinary Medicine / Microbe / Infectious disease / Protozoa / 遺伝子機能推定 / 蛋白質機能推定 / メタゲノム解析 / 自己組織化マツプ / 生物系統推定 / 環境ゲノム / トリペプチド頻度 / Bioinformatics / Environmental microorganisms / Protein function prediction / Phylogenetic prediction / Earth Simulator / Methagenome / 電気共生 / 嫌気消化 / メタン発酵 / 電子伝達 / 電気活性微生物 / カーボンブラック / マグネタイト / 発電菌 / 電気合成菌 / メタン菌 / 活性炭 / ナノ材料 / バイオマス / 廃棄物再資源化 / バイオエネルギー / 微生物電気合成 / 微生物電気化学 / 嫌気微生物 / 疾患モデル / 摂食行動 / 肥満 / 原生生物 / 細菌叢 / 真核生物叢 / タイ / ペプチド核酸 / PNA / アメーバ / 共生微生物 / 非結核性抗酸菌 / オミックス解析 / 一括学習型自己組織化マップ / 深層学習 / アプタマー / 分子標的薬 / 酵素 / ホスファターゼ / がん / ＤＮＡアプタマー / 抗がん剤 / 刺激応答 / 核酸治療 / エボラウイルス / マールブルグウイルス / 抗ウイルス薬 / 医薬分子設計 / RSウイルス / 分子疫学解析 / 臨床症状 / ウイルス量 / 海外渡航客数 / 温暖化 / RSウイルス流行時期 / 系統地理学 / 臨床経過解析 / 流行疫学 / 分子疫学 Less

汎フィロウイルス治療薬開発に向けたドライ-ウェット融合型研究基盤の構築Ongoing
- Principal Investigator
  
  五十嵐学
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 42020:Veterinary medical science-related
- Research Institution
  Hokkaido University
Elucidation of the mechanism for auto-penetrating DNA aptamers and their application as post-antibody drugsOngoing
- Principal Investigator
  
  中馬吉郎
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 50020:Tumor diagnostics and therapeutics-related
- Research Institution
  Niigata University
The integrated multi-omics analysis of nontuberculous mycobacteria using neural network algorithms to construct a predictive model of the pathological featuresOngoing
- Principal Investigator
  
  菊地利明
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Complex Systems Disease Theory
- Research Institution
  Niigata University
Why epidemic period of respiraotry syncytial virus has shift to summer time?Ongoing
- Principal Investigator
  
  齋藤玲子
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 58020:Hygiene and public health-related: including laboratory approach
- Research Institution
  Niigata University
水平伝播遺伝子予測システムの開発と環境適応と共進化過程の解明Principal InvestigatorOngoing
- Principal Investigator
  
  阿部貴志
- Project Period (FY)
  2017 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Niigata University
Elucidation of the function of a novel mouse gene in the central nervous system
- Principal Investigator
  
  TAKADA Toyoyuki
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Laboratory animal science
- Research Institution
  National Institute of Genetics
Fundamentals for innovative anaerobic digestion processes using electric syntrophy
- Principal Investigator
  
  Watanabe Kazuya
- Project Period (FY)
  2015 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Design and evaluation of sustainable and environmental conscious system
- Research Institution
  Tokyo University of Pharmacy and Life Science
The role of protozoa in the emergence of diseases
- Principal Investigator
  
  Nakao Ryo
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Veterinary medical science
- Research Institution
  Hokkaido University
Development of a novel bioinformatics method to analyze big genome sequence data for efficient knowledge discoveryPrincipal Investigator
- Principal Investigator
  
  Abe Takashi
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Niigata University
Genome analysis of biosphere of Moss-pillar in an east Antarctic lake
- Principal Investigator
  
  Baba Tomoya
- Project Period (FY)
  2012 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Applied genomics
- Research Institution
  National Institute of Genetics
  大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイエンス統合データベースセンター)
次世代シークエンス技術導入によるアフリカを中心としたダニ媒介性感染症研究の新展開
- Principal Investigator
  
  SUGIMOTO Chihiro
- Project Period (FY)
  2011 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Applied veterinary science
- Research Institution
  Hokkaido University
Genomic sequence studies of zoonotic disease viruses including influenza viruses with a novel bioinformatics method
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2011 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Nagahama Institute of Bio-Science and Technology
A bioinformatics strategy for revealing microbial community structures and metabolic pathways by reconstructing multiple genomes from metagenomic sequences.Principal Investigator
- Principal Investigator
  
  ABE Takashi
- Project Period (FY)
  2011 – 2013
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Applied genomics
- Research Institution
  Niigata University
Function prediction of poorly-characterized protein genes found in genome sequences with high-performance supercomputers and its publication
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2008 – 2010
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  ゲノム情報科学
- Research Institution
  Nagahama Institute of Bio-Science and Technology
A bioinformatics strategy to clarify microbial community structures by analyzing metagenomic sequences on the basis of Batch-Learning Self-Organizing MapPrincipal Investigator
- Principal Investigator
  
  ABE Takashi
- Project Period (FY)
  2008 – 2010
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Nagahama Institute of Bio-Science and Technology
全ゲノム情報に基づいた病原微生物と常在菌の多様性と病原遺伝子に関する情報学的研究
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Nagahama Institute of Bio-Science and Technology
地球温暖化による人類の生存環境および環境適応能に関する研究
- Principal Investigator
  
  ANNO Sumiko
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Exploratory Research
- Research Field
  
  生理人類学
- Research Institution
  Shibaura Institute of Technology
環境由来DNA配列を用いた難培養性微生物類の多様性解明と系統推定法の確立Principal Investigator
- Principal Investigator
  
  阿部貴志
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Applied genomics
- Research Institution
  Nagahama Institute of Bio-Science and Technology
  National Institute of Genetics
Sequence alignment-free method for phylogenetic and functional prediction and its application to molecular evolutionary studies
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  Nagahama Institute of Bio-Science and Technology
全ゲノム情報に基づいた病原微生物と常在菌の多様性と病原遺伝子に関する情報学的研究
- Principal Investigator
  
  池村淑道
- Project Period (FY)
  2005
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Graduate University for Advanced Studies
Genome analysis of Theileria orientalis and its functional genomics
- Principal Investigator
  
  SUGIMOTO Chihiro
- Project Period (FY)
  2005 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Applied veterinary science
- Research Institution
  Hokkaido University
ゲノムに潜むシグナル・モチーフ部品の網羅的探索のための自己組織化地図
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Graduate University for Advanced Studies
The impact of the physical and chemical factors of atmospheric environment on men's environmental adaptabilities
- Principal Investigator
  
  ANNO Sumiko
- Project Period (FY)
  2004 – 2006
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  生理人類学
- Research Institution
  Shibaura Institute of Technology
Bioinformatics strategy for unveiling hidden genome signatures and biodiversity
- Principal Investigator
  
  IKEMURA Toshimichi
- Project Period (FY)
  2004 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  The Graduate University for Advanced Studies (Sokendai), Hayama Center for Advanced Research

[Book] ベーシックマスター分子生物学 (東中川徹, 大山隆, 清水光弘共編)2014
- Author(s)
  池村淑道、阿部貴志
- Total Pages
  460
- Publisher
  オーム社
- Data Source
  KAKENHI-PROJECT-26330327
[Book] 一括学習型自己組織化マップ(BLSOM)を用いた大量メタゲノム解析.生命のビックデータ利用の最前線(植田充美監修)2014
- Author(s)
  阿部貴志,金谷重彦,池村淑道
- Publisher
  シーエムシー出版
- Data Source
  KAKENHI-PROJECT-23710242
[Book] 生命のビックデータ利用の最前線（植田充美　監修）2014
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道.
- Total Pages
  231
- Publisher
  シーエムシー出版
- Data Source
  KAKENHI-PROJECT-26330327
[Book] ベーシックマスター分子生物学（担当：16章　ゲノミクス）2013
- Author(s)
  東中川徹, 大山隆, 清水光弘共編　(池村淑道、阿部貴志)
- Total Pages
  438
- Publisher
  オーム社
- Data Source
  KAKENHI-PROJECT-23710242
[Book] Novel bioinformatics method to analyze more than 10,000 influenza virus strains easily at once: Batch-Learning Self Organizing Map (BLSOM). Advances in Viral Genomes Research (Eds: J. Borrelli and Y. Giannini)2013
- Author(s)
  Yuki Iwasaki, Toshimichi Ikemura, Kennosuke Wada, Yoshiko Wada, Takashi Abe
- Publisher
  Nova Science Publishers, Inc.
- Data Source
  KAKENHI-PROJECT-23710242
[Book] Advances in Viral Genomes Research (Novel bioinformatics method to analyze more than 10,000 influenza virus strains　easily at once: Batch-Learning Self Organizing Map (BLSOM).)2013
- Author(s)
  Eds: J. Borrelli and Y. Giannini (Yuki Iwasaki, Toshimichi Ikemura, Kennosuke Wada, Yoshiko Wada, Takashi Abe)
- Total Pages
  123
- Publisher
  Nova Science Publishers
- Data Source
  KAKENHI-PROJECT-23710242
[Book] 16章ゲノミクス.ベーシックマスター分子生物学(東中川徹,大山隆,清水光弘共編)2013
- Author(s)
  池村淑道,阿部貴志
- Publisher
  オーム社
- Data Source
  KAKENHI-PROJECT-23710242
[Book] Advance in Viral Genome Research2013
- Author(s)
  Yuki Iwasaki, Toshimichi Ikemura, Kennosuke Wada, Yoshiko Wada and Takashi Abe.
- Total Pages
  18
- Publisher
  Nova Science Publishers
- Data Source
  KAKENHI-PROJECT-23500371
[Book] インフルエンザウイルスゲノム配列の変化方向の予測2012
- Author(s)
  岩崎裕貴,和田健之介,阿部貴志,池村淑道
- Publisher
  アドバンスシミュレーション
- Data Source
  KAKENHI-PROJECT-23710242
[Book] メタゲノム解析による微生物群集構造の解明への一括学習型自己組織化マップ(BLSOM)の活用,生物工学会誌 90(12)2012
- Author(s)
  阿部貴志,中尾亮,杉本千尋
- Data Source
  KAKENHI-PROJECT-23710242
[Book] 新規情報学的手法を用いたインフルエンザウイルスのゲノム塩基配列の変化の方向性の予測生物工学会誌, 90(12)2012
- Author(s)
  岩崎裕貴,阿部貴志,和田健之介,池村淑道
- Data Source
  KAKENHI-PROJECT-23710242
[Book] Knowledge-Based Bioinformatics (Eds.Gil Alterovits, Marco Ramoni)2010
- Author(s)
  Takashi Abe, Shigehiko Kanaya, Toshimichi Ikemura
- Total Pages
  375
- Publisher
  Wiley & Sons, Ltd
- Data Source
  KAKENHI-PROJECT-20700273
[Book] Wiley & Sons(Sequences from prokaryotic, eukaryotic and viral genomes currently available clustered according to phylotype on a large-scale Self-Organizing Map., Knowledge Based Bioinformatics)(Eds.Gil Alterovites, Marco Ramoni), Ltd.2010
- Author(s)
  Takashi Abe, Shigehiko Kanaya, Toshimichi Ikemura
- Data Source
  KAKENHI-PROJECT-20700273
[Book] 生物の科学遺伝(遺伝分野の教育における高校と大学の連携の能性,Vol.63,No.1)2009
- Author(s)
  上原啓史、阿部貴志、池村淑道
- Publisher
  エヌ・ティー・エス
- Data Source
  KAKENHI-PROJECT-20700273
[Book] マリンメタゲノムの有効利用(環境巾来大量DNA配列を利用した難培養性生物群の系統推定のための新規情報学手法)(松永是、竹山春子監修)2009
- Author(s)
  阿部貴志、上原啓史、金谷重彦、池村淑道
- Publisher
  シーエムシー出版
- Data Source
  KAKENHI-PROJECT-20700273
[Book] Computational Biology : New Research(Ed.Alona S.Russe)2009
- Author(s)
  Sumiko Anno, Takashi Abe
- Total Pages
  441
- Publisher
  Nova Science Publishers, Inc.
- Data Source
  KAKENHI-PROJECT-20700273
[Book] マリンメタゲノムの有効利用(松永是,竹山春子監修)2009
- Author(s)
  阿部貴志, 上原啓史, 金谷重彦, 池村淑道
- Total Pages
  279
- Publisher
  シーエムシー出版
- Data Source
  KAKENHI-PROJECT-20510194
[Book] マリンメタゲノムの有効利用(松永是, 竹山春子監修)2009
- Author(s)
  阿部貴志, 上原啓史, 金谷重彦, 池村淑道
- Total Pages
  279
- Publisher
  シーエムシー出版
- Data Source
  KAKENHI-PROJECT-20700273
[Book] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立『日本化学会情報化学部会誌』Vol.262008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Data Source
  KAKENHI-PROJECT-20700273
[Book] Computational Biology:New Research2008
- Author(s)
  Sumiko Anno, Takashi Abe
- Publisher
  Nova Science Publishers,Inc.(2008年発行予定)
- Data Source
  KAKENHI-PROJECT-18657083
[Book] エキスパートがキュレートしたtRNAデータベース日本化学会情報化学部会誌 Vol.262008
- Author(s)
  井口八郎、小原康雄、武藤あきら、山田優子、木ノ内誠、前野聖、金谷重彦、池村淑道、阿部貴志
- Data Source
  KAKENHI-PROJECT-20700273
[Book] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法による新規情報学的手法の開発日本化学会情報化学部会誌、Vol.262008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Data Source
  KAKENHI-PROJECT-20700273
[Book] 持続可能型社会への貢献遺伝子データベース日本化学会情報化学部会誌2008
- Author(s)
  上原啓史、棚橋佳代、阿部貴志、池村淑道
- Data Source
  KAKENHI-PROJECT-20700273
[Book] 公的データベースからの有用遺伝子の発掘:持続可能型社会への貢献遺伝子データベースの構築と世界最高水準スーパーコンピュータの利用」、日本化学会情報科学部会誌、Vol.262008
- Author(s)
  池村淑道、上原啓史、棚橋佳代、阿部貴志
- Data Source
  KAKENHI-PROJECT-20700273
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  阿部貴志, 池村淑道, 木ノ内誠, 中村由紀子, 前野聖, 金谷重彦
- Total Pages
  12
- Publisher
  シュプリンガージャパン出版
- Data Source
  KAKENHI-PROJECT-18018015
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  阿部貴志, 池村淑道, 木ノ内誠, 中村由紀子, 前野聖, 金谷重彦
- Total Pages
  314
- Publisher
  シュプリンガージャパン出版
- Data Source
  KAKENHI-PROJECT-18710176
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  阿部貴志, 池村淑道, 木ノ内誠, 中村由紀子, 前野聖, 金谷重彦
- Total Pages
  12
- Publisher
  シュプリンガージャパン出版
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  松浦弥三郎, 阿部貴志, 池村淑道, 徳高平蔵, 大北正昭
- Total Pages
  5
- Publisher
  シュプリンガージャパン出版
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Book] 自己組織化マップ法・その発展-生物学から社会学まで2007
- Author(s)
  松浦弥三郎, 阿部貴志, 池村淑道, 徳高平蔵, 大北正昭
- Total Pages
  5
- Publisher
  シュプリンガージャパン出版
- Data Source
  KAKENHI-PROJECT-18018015
[Book] DNA Structure, Chromatin and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Kosaka, Y., Ikemura, T.
- Total Pages
  252
- Publisher
  Research Signpost
- Data Source
  KAKENHI-PROJECT-18018015
[Book] DNA Structure, Chromation and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Hanaya, S., Kosaka, Y., Ikemura, T.
- Publisher
  Rescarch Signpost
- Data Source
  KAKENHI-PROJECT-18570216
[Book] DNA Structure, Chromatin and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Kosaka, Y. and Ikemura, T.
- Total Pages
  16
- Publisher
  Research Signpost
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Book] tRNADB-CE and use of tRNAs as phylogenetic markers for metagenomic sequences, Encyclopedia of Metagenomics
- Author(s)
  Takashi Abe, Hachiro Inokuchi, Yuko Yamada, Akira Muto, Yuki Iwasaki, Toshimichi Ikemura
- Publisher
  Springer(in press)
- Data Source
  KAKENHI-PROJECT-23710242
[Book] 第18バイオ情報学研究会(オリゴヌクレオチド組成を用いた一括学習型自己組織化地図法によるA型インフルエンザウイルスの府目敢的な特徴解明)、Vo1.2009-BIO-18 No5
- Author(s)
  岩崎裕貴、池村淑道、伊藤正恵、阿部貴志
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Cysteinyl Leukotriene synthesis via Phospholipase A2 Group IV Mediates Exercise-induced Bronchoconstriction and Airway Remodeling2020
- Author(s)
  Ueno Hiroshi、Koya Toshiyuki、Takeuchi Hiroyuki、Tsukioka Keisuke、Saito Akira、Kimura Yosuke、Hayashi Masachika、Watanabe Satoshi、Hasegawa Takashi、Arakawa Masaaki、Kikuchi Toshiaki
- Journal Title
  
  American Journal of Respiratory Cell and Molecular Biology
  
  Volume: in press
- DOI
  10.1165/rcmb.2019-0325oc
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] ONO-7475, a novel AXL inhibitor, suppresses the adaptive resistance to initial EGFR-TKI treatment in EGFR-mutated non-small lung cancer.2020
- Author(s)
  Okura N, Nishioka N, Yamada T, Taniguchi H, Tanimura K, Katayama Y, Yoshimura A, Watanabe S, Kikuchi T, Shiotsu S, Kitazaki T, Nishiyama A, Iwasaku M, Kaneko Y, Uchino J, Uehara H, Horinaka M, Sakai T, Tanaka K, Kozaki R, Yano S, Takayama K.
- Journal Title
  
  Clin Cancer Res.
  
  Volume: 26 Pages: 2244-2256
- DOI
  10.1158/1078-0432.ccr-19-2321
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019, KAKENHI-PLANNED-17H06398, KAKENHI-PROJECT-19H01079
[Journal Article] Prognostic significance of the radiologic features of pneumonitis induced by anti‐PD‐1 therapy2020
- Author(s)
  Watanabe Satoshi、Ota Takeshi、Hayashi Masachika、Ishikawa Hiroyuki、Otsubo Aya、Shoji Satoshi、Nozaki Koichiro、Ichikawa Kosuke、Kondo Rie、Miyabayashi Takao、Miura Satoru、Tanaka Hiroshi、Abe Tetsuya、Okajima Masaaki、Terada Masaki、Ishida Takashi、Iwashima Akira、Sato Kazuhiro、Yoshizawa Hirohisa、Kikuchi Toshiaki
- Journal Title
  
  Cancer Medicine
  
  Volume: 9 Pages: 3070-3077
- DOI
  10.1002/cam4.2974
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Factors Contributing to Symptom Duration and Viral Reduction in Outpatient Children With Respiratory Syncytial Virus Infection2020
- Author(s)
  Utsunomiya Takeshi、Hibino Akinobu、Taniguchi Kiyosu、Nagai Takao、Saito Naruo、Tanabe Ikumi、Odagiri Takashi、Shobugawa Yugo、Kaneko Akira、Saito Reiko
- Journal Title
  
  Pediatric Infectious Disease Journal
  
  Volume: Publish Ahead of Print
- DOI
  10.1097/inf.0000000000002626
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K10043
[Journal Article] A strategy for predicting gene functions from genome and metagenome sequences on the basis of oligopeptide frequency distance2020
- Author(s)
  Takashi Abe, Ryo Ikarashi, Masaya Mizoguchi, Masashi Otake, Toshimichi Ikemura
- Journal Title
  
  Genes Genet. Syst.
  
  Volume: 95 Issue: 1 Pages: 11-19
- DOI
  10.1266/ggs.19-00041
- ISSN
  1341-7568, 1880-5779
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K00401
[Journal Article] Serum Anti-interferon-γ Autoantibody Titer as a Potential Biomarker of Disseminated Non-tuberculous Mycobacterial Infection2020
- Author(s)
  Yoshizawa K, Aoki A, Shima K, Tanabe Y, Koya T, Hasegawa T, Kikuchi T, Sakagami T.
- Journal Title
  
  Journal of Clinical Immunology
  
  Volume: 40 Pages: 399-405
- DOI
  10.1007/s10875-020-00762-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019, KAKENHI-PROJECT-19K08956
[Journal Article] Distribution of Legionella species and serogroups in patients with culture-confirmed Legionella pneumonia2020
- Author(s)
  Miyashita Naoyuki、Higa Futoshi、Aoki Yosuke、Kikuchi Toshiaki、Seki Masafumi、Tateda Kazuhiro、Maki Nobuko、Uchino Kazuhiro、Ogasawara Kazuhiko、Kiyota Hiroshi、Watanabe Akira
- Journal Title
  
  Journal of Infection and Chemotherapy
  
  Volume: 26 Pages: 411-417
- DOI
  10.1016/j.jiac.2019.12.016
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Characterization of low adherence population in asthma patients from Japan using Adherence Starts with Knowledge-122020
- Author(s)
  Kimura Yuka、Koya Toshiyuki、Hasegawa Takashi、Ueno Hiroshi、Yoshizawa Kazutaka、Kimura Yosuke、Hayashi Masachika、Watanabe Satoshi、Kikuchi Toshiaki
- Journal Title
  
  Allergology International
  
  Volume: 69 Issue: 1 Pages: 61-65
- DOI
  10.1016/j.alit.2019.07.006
- ISSN
  1323-8930, 1440-1592
- Language
  English
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] First-line osimertinib treatment in patients with lung squamous cell carcinoma harboring active epidermal growth factor receptor mutations2020
- Author(s)
  Shoji Satoshi、Watanabe Satoshi、Takamura Kaori、Umezu Hajime、Kikuchi Toshiaki
- Journal Title
  
  Lung Cancer
  
  Volume: 140 Pages: 113-115
- DOI
  10.1016/j.lungcan.2019.11.012
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Multiplex cytokine analysis in Mycobacterium avium complex lung disease: relationship between CXCL10 and poor prognostic factors2019
- Author(s)
  Bamba Yuuki、Moro Hiroshi、Aoki Nobumasa、Koizumi Takeshi、Ohshima Yasuyoshi、Watanabe Satoshi、Sakagami Takuro、Koya Toshiyuki、Takada Toshinori、Kikuchi Toshiaki
- Journal Title
  
  BMC Infectious Diseases
  
  Volume: 19 Pages: 263-263
- DOI
  10.1186/s12879-019-3888-4
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Retrospective efficacy analysis of immune checkpoint inhibitors in patients with EGFR-mutated non-small cell lung cancer.2019
- Author(s)
  Yamada Tadaaki、Hirai Soichi、Katayama Yuki、Yoshimura Akihiro、Shiotsu Shinsuke、Watanabe Satoshi、Kikuchi Toshiaki、Hirose Kazuki、Kubota Yutaka、Chihara Yusuke、Harada Taishi、Tanimura Keiko、Takeda Takayuki、Tamiya Nobuyo、Kaneko Yoshiko、Uchino Junji、Takayama Koichi
- Journal Title
  
  Cancer Med.
  
  Volume: 8 Pages: 1521-1529
- DOI
  10.1002/cam4.2037
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Viral population analysis of the taiga tick, <i>Ixodes persulcatus,</i> by using Batch Learning Self-Organizing Maps and BLAST search2019
- Author(s)
  QIU Yongjin、ABE Takashi、NAKAO Ryo、SATOH Kenro、SUGIMOTO Chihiro
- Journal Title
  
  J. Vet. Med. Sci.
  
  Volume: 81 Issue: 3 Pages: 401-410
- DOI
  10.1292/jvms.18-0483
- NAID
  130007617731
- ISSN
  0916-7250, 1347-7439
- Language
  English
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05633, KAKENHI-PROJECT-16K19112, KAKENHI-PROJECT-17K00401
[Journal Article] An α-Lipoic acid derivative, and anti-ROS agent, prevents the acquisition of multi-drug resistance in clinical isolates of Pseudomonas aeruginosa2019
- Author(s)
  Hayakawa Sachiko、Kawamura Masato、Sato Takumi、Hirano Taizou、Kikuchi Toshiaki、Watanabe Akira、Fujimura Shigeru
- Journal Title
  
  Journal of Infection and Chemotherapy
  
  Volume: 25 Pages: 28-33
- DOI
  10.1016/j.jiac.2018.10.003
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Towards development of electrogenetics using electrochemically active bacteria2019
- Author(s)
  Hirose A, Kouzuma A, Watanabe K
- Journal Title
  
  Biotechnology Advances
  
  Volume: In press Pages: 107351-107351
- DOI
  10.1016/j.biotechadv.2019.02.007
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H01753, KAKENHI-PROJECT-17J05454, KAKENHI-PROJECT-18K05399
[Journal Article] Baloxavir heralds a new era in influenza virus biology2019
- Author(s)
  Kikuchi Toshiaki、Watanabe Akira
- Journal Title
  
  Respiratory Investigation
  
  Volume: 57 Pages: 1-2
- DOI
  10.1016/j.resinv.2018.10.002
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Efficacy of EGFR‐TKIs with or without upfront brain radiotherapy for EGFR ‐mutant NSCLC patients with central nervous system metastases2019
- Author(s)
  Saida Yu、Watanabe Satoshi、Abe Tetsuya、Shoji Satoshi、Nozaki Koichiro、Ichikawa Kosuke、Kondo Rie、Koyama Kenichi、Miura Satoru、Tanaka Hiroshi、Okajima Masaaki、Terada Masaki、Ishida Takashi、Tsukada Hiroki、Makino Masato、Iwashima Akira、Sato Kazuhiro、Matsumoto Naoya、Yoshizawa Hirohisa、Kikuchi Toshiaki
- Journal Title
  
  Thoracic Cancer
  
  Volume: 10 Pages: 2106-2116
- DOI
  10.1111/1759-7714.13189
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Understanding and engineering electrochemically active bacteria for sustainable biotechnology2019
- Author(s)
  Hirose Atsumi、Kasai Takuya、Koga Ryota、Suzuki Yusuke、Kouzuma Atsushi、Watanabe Kazuya
- Journal Title
  
  Bioresourc. Bioprocess
  
  Volume: 6 Pages: 10-10
- DOI
  10.1186/s40643-019-0245-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K05399, KAKENHI-PROJECT-15H01753, KAKENHI-PROJECT-17J05454
[Journal Article] Moxifloxacin resistance and genotyping of Mycobacterium avium and Mycobacterium intracellulare isolates in Japan.2019
- Author(s)
  Yamaba Yusuke、Ito Yutaka、Suzuki Katsuhiro、Kikuchi Toshiaki、Ogawa Kenji、Fujiuchi Satoru、Hasegawa Naoki、Kurashima Atsuyuki、Higuchi Takeshi、Uchiya Kei-ichi、Watanabe Akira、Niimi Akio
- Journal Title
  
  J Infect Chemother
  
  Volume: 25 Pages: 995-1000
- DOI
  10.1016/j.jiac.2019.05.028
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019, KAKENHI-PROJECT-19K08966, KAKENHI-PROJECT-15K08049
[Journal Article] AXL confers intrinsic resistance to osimertinib and advances the emergence of tolerant cells2019
- Author(s)
  Taniguchi H, Yamada T, Wang R, Tanimura K, Adachi Y, Nishiyama A, Tanimoto A, Takeuchi S, Araujo LH, Boroni M, Yoshimura A, Shiotsu S, Matsumoto I, Watanabe S, Kikuchi T, Miura S, Tanaka H, Kitazaki T, Yamaguchi H, Mukae H, Uchino J, Uehara H, Takayama K, Yano S.
- Journal Title
  
  Nature Communications
  
  Volume: 10 Pages: 259-259
- DOI
  10.1038/s41467-018-08074-0
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K09649, KAKENHI-PROJECT-16H05308, KAKENHI-PROJECT-18KT0019, KAKENHI-PROJECT-19K08608, KAKENHI-PROJECT-19H03665
[Journal Article] Roles of D-lactate dehydrogenases in the anaerobic growth of Shewanella oneidensis MR-1 on sugars2019
- Author(s)
  Kasai Takuya、Suzuki Yusuke、Kouzuma Atsushi、Watanabe Kazuya
- Journal Title
  
  Appl. Environ. Microbiol.
  
  Volume: 85
- DOI
  10.1128/aem.02668-18
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K05399, KAKENHI-PROJECT-15H01753
[Journal Article] Retrospective analysis of antitumor effects and biomarkers for nivolumab in NSCLC patients with EGFR mutations2019
- Author(s)
  Sato Miyuki、Watanabe Satoshi、Tanaka Hiroshi、Nozaki Koichiro、Arita Masashi、Takahashi Miho、Shoji Satoshi、Ichikawa Kosuke、Kondo Rie、Aoki Nobumasa、Hayashi Masachika、Ohshima Yasuyoshi、Koya Toshiyuki、Ohashi Riuko、Ajioka Yoichi、Kikuchi Toshiaki
- Journal Title
  
  PLOS ONE
  
  Volume: 14
- DOI
  10.1371/journal.pone.0215292
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Validation of a diagnostic score model for the prediction of Legionella pneumophila pneumonia2019
- Author(s)
  Miyashita Naoyuki、Horita Nobuyuki、Higa Futoshi、Aoki Yosuke、Kikuchi Toshiaki、Seki Masafumi、Tateda Kazuhiro、Maki Nobuko、Uchino Kazuhiro、Ogasawara Kazuhiko、Kiyota Hiroshi、Watanabe Akira
- Journal Title
  
  Journal of Infection and Chemotherapy
  
  Volume: 25 Pages: 407-412
- DOI
  10.1016/j.jiac.2019.03.009
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Correlation of prechemotherapy urinary megalin ectodomain (A-megalin) levels with the development of cisplatin-induced nephrotoxicity: a prospective observational study2019
- Author(s)
  Shoji Satoshi、Hosojima Michihiro、Kabasawa Hideyuki、Kondo Rie、Miura Satoru、Watanabe Satoshi、Aoki Nobumasa、Kaseda Ryohei、Kuwahara Shoji、Tanabe Naohito、Hirayama Yoshiaki、Narita Ichiei、Kikuchi Toshiaki、Kagamu Hiroshi、Saito Akihiko
- Journal Title
  
  BMC Cancer
  
  Volume: 19 Pages: 1170-1170
- DOI
  10.1186/s12885-019-6398-2
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] A Phase II Study of Irinotecan for Patients with Previously Treated Small-Cell Lung Cancer2018
- Author(s)
  Kondo Rie、Watanabe Satoshi、Shoji Satoshi、Ichikawa Kosuke、Abe Tetsuya、Baba Junko、Tanaka Junta、Tsukada Hiroki、Terada Masaki、Sato Kazuhiro、Maruyama Yoshie、Makino Masato、Hirata Akira、Tanaka Hiroshi、Koya Toshiyuki、Yoshizawa Hirohisa、Kikuchi Toshiaki
- Journal Title
  
  Oncology
  
  Volume: 94 Pages: 223-232
- DOI
  10.1159/000486622
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K09168, KAKENHI-PROJECT-18KT0019
[Journal Article] Increased presepsin levels are associated with the severity of fungal bloodstream infections2018
- Author(s)
  Bamba Yuuki、Moro Hiroshi、Aoki Nobumasa、Koizumi Takeshi、Ohshima Yasuyoshi、Watanabe Satoshi、Sakagami Takuro、Koya Toshiyuki、Takada Toshinori、Kikuchi Toshiaki
- Journal Title
  
  PLOS ONE
  
  Volume: 13
- DOI
  10.1371/journal.pone.0206089
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] CpdA is involved in amino acid metabolism in Shewanella oneidensis MR-12018
- Author(s)
  Kasai T, Kouzuma A, Watanabe K
- Journal Title
  
  Bioscience, Biotechnology, and Biochemistry
  
  Volume: 82 Pages: 166-172
- DOI
  10.1080/09168451.2017.1413326
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H01753, KAKENHI-PROJECT-16J08653
[Journal Article] Complete genome sequence of Acidithiobacillus ferridurans JCM 189812018
- Author(s)
  Miyauchi Tomoko、Kouzuma Atsushi、Abe Takashi、Watanabe Kazuya
- Journal Title
  
  Microbiol. Resour. Announ
  
  Volume: 7
- DOI
  10.1128/mra.01028-18
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K00401, KAKENHI-PROJECT-18K05399, KAKENHI-PROJECT-15H01753
[Journal Article] Diagnostic predictors of Legionella pneumonia in Japan2018
- Author(s)
  Miyashita Naoyuki、Horita Nobuyuki、Higa Futoshi、Aoki Yosuke、Kikuchi Toshiaki、Seki Masafumi、Tateda Kazuhiro、Maki Nobuko、Uchino Kazuhiro、Ogasawara Kazuhiko、Kiyota Hiroshi、Watanabe Akira
- Journal Title
  
  Journal of Infection and Chemotherapy
  
  Volume: 24 Pages: 159-163
- DOI
  10.1016/j.jiac.2017.12.009
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] In vitro activity of various antibiotics against clinical strains of Legionella species isolated in Japan2018
- Author(s)
  Miyashita N, Kobayashi I, Higa F, Aoki Y, Kikuchi T, Seki M, Tateda K, Maki N, Uchino K, Ogasawara K, Kurachi S, Ishikawa T, Ishimura Y, Kanesaka I, Kiyota H, Watanabe A.
- Journal Title
  
  Journal of Infection and Chemotherapy
  
  Volume: 24 Pages: 325-329
- DOI
  10.1016/j.jiac.2018.01.018
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K15316, KAKENHI-PROJECT-18KT0019
[Journal Article] Electrode plate-culture methods for colony isolation of exoelectrogens from anode microbiomes2018
- Author(s)
  Ueoka N, Kouzuma A, Watanabe K
- Journal Title
  
  Bioelectrochem
  
  Volume: 124 Pages: 1-6
- DOI
  10.1016/j.bioelechem.2018.06.008
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H01753
[Journal Article] Discovery of Mwinilunga alphavirus: A novel alphavirus in Culex mosquitoes in Zambia.2018
- Author(s)
  Torii S, Orba Y, Hang'ombe BM, Mweene AS, Wada Y, Anindita PD, Phongphaew W,
- Journal Title
  
  Virus Res
  
  Volume: 18 Pages: 31-36
- DOI
  10.1016/j.virusres.2018.04.005
- NAID
  120006626571
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K07715, KAKENHI-PROJECT-17K00401, KAKENHI-PROJECT-18K15163, KAKENHI-INTERNATIONAL-16K21723, KAKENHI-ORGANIZER-16H06429, KAKENHI-PLANNED-16H06431, KAKENHI-PROJECT-16H05805
[Journal Article] Phase I Study Evaluating the Combination of Afatinib with Carboplatin and Pemetrexed After First-line EGFR-TKIs2018
- Author(s)
  WATANABE SATOSHI、YAMAGUCHI OU、MASUMOTO AI、MAENO YURI、KAWASHIMA YOSUKE、ISHIMOTO OSAMU、SUGAWARA SHUNICHI、YOSHIZAWA HIROHISA、KIKUCHI TOSHIAKI、NUKIWA TOSHIHIRO、KOBAYASHI KUNIHIKO
- Journal Title
  
  Anticancer Research
  
  Volume: 38 Pages: 4699-4704
- DOI
  10.21873/anticanres.12776
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KT0019
[Journal Article] Metagenomic insights into the ecology and physiology of microbes in bioelectrochemical systems2018
- Author(s)
  Kouzuma Atsushi、Ishii Shun'ichi、Watanabe Kazuya
- Journal Title
  
  Bioresour. Technol.
  
  Volume: 255 Pages: 302-307
- DOI
  10.1016/j.biortech.2018.01.125
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K19435, KAKENHI-PROJECT-15H01753
[Journal Article] Electrochemically active bacteria sense electrode potentials for regulating catabolic pathways2018
- Author(s)
  Hirose A, Kasai T, Aoki M, Umemura T, Watanabe K, Kouzuma A
- Journal Title
  
  Nature Communications
  
  Volume: 9 Pages: 1083-1083
- DOI
  10.1038/s41467-018-03416-4
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H01753, KAKENHI-PROJECT-15H03830, KAKENHI-PROJECT-16J08653, KAKENHI-PROJECT-17J05454
[Journal Article] Methylomusa anaerophila gen. nov., sp. nov., an anaerobic methanol-utilizing bacterium isolated from a microbial fuel cell2018
- Author(s)
  Amano N, Yamamuro A, Miyahara M, Kouzuma K, Abe T, Watanabe K
- Journal Title
  
  International Journal of Systematic and Evolutionary Microbiology
  
  Volume: 68 Pages: 1118-1122
- DOI
  10.1099/ijsem.0.002635
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H01753, KAKENHI-PROJECT-17K00401
[Journal Article] Impact of Concurrent Genomic Alterations Detected by Comprehensive Genomic Sequencing on Clinical Outcomes in East-Asian Patients with EGFR-Mutated Lung Adenocarcinoma.2018
- Author(s)
  Sato Seijiro、Nagahashi Masayuki、Koike Terumoto、Ichikawa Hiroshi、Shimada Yoshifumi、Watanabe Satoshi、Kikuchi Toshiaki、Takada Kazuki、Nakanishi Ryota、Oki Eiji、Okamoto Tatsuro、Akazawa Kouhei、Lyle Stephen、Ling Yiwei、Takabe Kazuaki、Okuda Shujiro、Wakai Toshifumi、Tsuchida Masanori
- Journal Title
  
  Scientific Reports
  
  Volume: 8 Pages: 1-10
- DOI
  10.1038/s41598-017-18560-y
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K09168, KAKENHI-PROJECT-15K10235, KAKENHI-PROJECT-18KT0019
[Journal Article] Non-autotrophic methanogens dominate in anaerobic digesters2017
- Author(s)
  Kouzuma A, Tsutsumi M, Ishii S, Ueno Y, Abe T, Watanabe K
- Journal Title
  
  Scientific Reports
  
  Volume: 7 Pages: 1510-1510
- DOI
  10.1038/s41598-017-01752-x
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15H01753, KAKENHI-PROJECT-17K00401
[Journal Article] Structures, compositions, and activities of live Shewanella biofilms formed on graphite electrodes in electrochemical flow cells2017
- Author(s)
  Kitayama Miho、Koga Ryota、Kasai Takuya、Kouzuma Atsushi、Watanabe Kazuya
- Journal Title
  
  Applied and Environmental Microbiology
  
  Volume: 83
- DOI
  10.1128/aem.00903-17
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H01753, KAKENHI-PROJECT-16J08653
[Journal Article] IntroMap: a signal analysis based method for the detection of genomic introgressions.2017
- Author(s)
  Daniel J. Shea, Motoki Shimizu, Namiko Nishida, Eigo Fukai, Takashi Abe, Ryo Fujimoto and Keiichi Okazaki.
- Journal Title
  
  BMC Genetics
  
  Volume: 18 Pages: 101-101
- NAID
  120006380397
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K00401
[Journal Article] An artificial intelligence approach fit for tRNA gene studies in the era of big sequence data2017
- Author(s)
  Yuki Iwasaki, Takashi Abe, Kennosuke Wada, Yoshiko Wada, Toshimichi Ikemura
- Journal Title
  
  Genes Genet. Syst.
  
  Volume: 印刷中 Issue: 1 Pages: 43-54
- DOI
  10.1266/ggs.16-00068
- NAID
  130006073276
- ISSN
  1341-7568, 1880-5779
- Language
  English
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26330334, KAKENHI-PROJECT-17K00401
[Journal Article] Comparative evaluation of wastewater-treatment microbial fuel cells in terms of organics removal, waste-sludge production and electricity generation2017
- Author(s)
  Asai Y, Miyahara M, kouzuma A, Watanabe K
- Journal Title
  
  Bioresour. Bioprocess.
  
  Volume: 4 Pages: 30-30
- DOI
  10.1186/s40643-017-0163-7
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H01753
[Journal Article] Ciliate Paramecium is a natural reservoir of Legionella pneumophila.2016
- Author(s)
  Watanabe K, Nakao R, Fujishima M, Tachibana M, Shimizu T, Watarai M
- Journal Title
  
  Scientific Reports
  
  Volume: 6 Pages: 24322-24322
- DOI
  10.1038/srep24322
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K14850, KAKENHI-PROJECT-26291073, KAKENHI-PROJECT-15K18782
[Journal Article] Genomic features of uncultured methylotrophs in activated-sludge microbiomes grown under different enrichment procedures.2016
- Author(s)
  Kazuki Fujinawa, Yusuke Asai, Morio Miyahara, Atsushi Kouzuma, Takashi Abe and Kazuya Watanabe.
- Journal Title
  
  Scientific Reports
  
  Volume: 6 Pages: 26650-26650
- DOI
  10.1038/srep26650
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26330327
[Journal Article] Horizontally Transferred Genetic Elements in the Tsetse Fly Genome: An Alignment-Free Clustering Approach Using Batch Learning Self-Organising Map (BLSOM).2016
- Author(s)
  Nakao R, Abe T, Funayama S, Sugimoto C.
- Journal Title
  
  BioMed Research International
  
  Volume: 2016 Pages: 3164624-3164624
- DOI
  10.1155/2016/3164624
- NAID
  120005955473
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-16H06429, KAKENHI-PLANNED-16H06431, KAKENHI-PROJECT-15H05633, KAKENHI-PROJECT-26330327, KAKENHI-PROJECT-15K14850
[Journal Article] Electricity generation from rice bran in microbial fuel cells2016
- Author(s)
  Takahashi S, Miyahara M, Kouzuma A, Watanabe K
- Journal Title
  
  Bioresources and Bioprocessing
  
  Volume: 3 Pages: 50-50
- DOI
  10.1186/s40643-016-0129-1
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15H01753
[Journal Article] Draft Genome Sequences of Five Legionella pneumophila Strains Isolated from Environmental Water Samples.2015
- Author(s)
  Watanabe K, Suzuki H, Nakao R, Shimizu T, Watarai M
- Journal Title
  
  Genome Announcements
  
  Volume: 3 Pages: 3-3
- DOI
  10.1128/genomea.00474-15
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K14850, KAKENHI-PROJECT-15K18782
[Journal Article] Development of Self-Compressing BLSOM for Comprehensive Analysis of Big Sequence Data.2015
- Author(s)
  Akihito Kikuchi, Toshimichi Ikemura, and Takashi Abe.
- Journal Title
  
  BioMed Research International
  
  Volume: 2015 Pages: 506052-506052
- DOI
  10.1155/2015/506052
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26330327, KAKENHI-PROJECT-26330334
[Journal Article] Microbial interspecies interactions: recent findings in syntrophic consortia2015
- Author(s)
  Kouzuma A, Kato S, Watanabe K
- Journal Title
  
  Front. Microbiol.
  
  Volume: 6 Pages: 477-477
- DOI
  10.3389/fmicb.2015.00477
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H01753
[Journal Article] Visualization of genome signatures of eukaryote genomes by Batch-Learning Self-Organizing Map (BLSOM) with a special emphasis on Drosophila genomes.2014
- Author(s)
  Takashi Abe, Yuta Hamao, Toshimichi Ikemura
- Journal Title
  
  BioMed Research International
  
  Volume: Article ID 985706 Pages: 985706-985706
- DOI
  10.1155/2014/985706
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23710242, KAKENHI-PROJECT-26330327, KAKENHI-PROJECT-26330334
[Journal Article] Evolutionary Changes in Vertebrate Genome Signatures with Special Focus on Coelacanth.2014
- Author(s)
  Iwasaki Y, Abe T, Okada N, Wada K, Wada Y, Ikemura T.
- Journal Title
  
  DNA Res.
  
  Volume: 21 Pages: 459-467
- DOI
  10.1093/dnares/dsu012
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26291075, KAKENHI-PROJECT-26330327, KAKENHI-PROJECT-26330334
[Journal Article] tRNADB-CE: tRNA gene database well-timed in the era of big sequence data.2014
- Author(s)
  Takashi Abe, Hachiro Inokuchi, Yuko Yamada, Akira Muto, Yuki Iwasaki, Toshimichi Ikemura
- Journal Title
  
  Frontiers in GENETICS
  
  Volume: 5 Pages: 114-114
- DOI
  10.3389/fgene.2014.00114
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23710242, KAKENHI-PROJECT-26330327
[Journal Article] Metagenomic analyses reveal the involvement of syntrophic consortia in methanol/electricity conversion in microbial fuel cells.2014
- Author(s)
  Ayaka Yamamuro, Atsushi Kouzuma, Takashi Abe, Kazuya Watanabe.
- Journal Title
  
  PLoS ONE
  
  Volume: 9
- DOI
  10.1371/journal.pone.0098425
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26330327
[Journal Article] Novel bioinformatics strategies for prediction of directional sequence changes in influenza virus genomes and for surveillance of potentially hazardous strains2014
- Author(s)
  Bai Y, Iwasaki Y, Kanaya S, Zhao Y, lkemura Y
- Journal Title
  
  BMC Infect Dis.
  
  Volume: Volume 2014(2014)Article ID 765648 Pages: 765648-765648
- DOI
  10.1155/2014/765648
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-12J09979, KAKENHI-PROJECT-23500371, KAKENHI-PROJECT-26330334
[Journal Article] Comparative metagenomics of anode- associated microbiomes developed in rice paddy-field microbial fuel cells2013
- Author(s)
  Atsushi Kouzuma, Takuya Kasai, Gen Nakagawa, Ayaka Yamamoto, Takashi Abe and Kazuya Watanabe.
- Journal Title
  
  PLoS ONE
  
  Volume: 8(11)
- DOI
  10.1371/journal.pone.0077443
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Whole-genome sequencing of Theileria parva strains provides insight into parasite migration and diversification in the African continent2013
- Author(s)
  Kyoko Hayashida, Takashi Abe, William Weir, Ryo Nakao, Kimihito Ito, Kiichi Kajino, Yutaka Suzuki, Frans Jongejan, Dirk Geysen, and Chihiro Sugimoto.
- Journal Title
  
  DNA Res
  
  Volume: 20 Pages: 209-220
- DOI
  10.1093/dnares/dst003
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242, KAKENHI-PROJECT-25280080
[Journal Article] Systematization of diversity of protein sequences in enzymes related to secondary metabolic pathways in plants in the context of big data biology inspired by KNApSAcK Motorcycle database.2013
- Author(s)
  Shun Ikeda*, Takashi Abe*, Yukiko Nakamura, Kibinge Nelson, Aki Hirai Morita, Atsushi Nakatani, Naoaki Ono, Toshimichi Ikemura, Kensuke Nakamura, Md. Altaf-Ul-Amin, Shigehiko Kanaya (*equal contribution).
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: 54 Pages: 711-727
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] A novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks.2013
- Author(s)
  Nakao R, Abe T, Nijhof AM, Yamamoto S, Jongejan F, Ikemura T, Sugimoto C.
- Journal Title
  
  ISME J
  
  Volume: 7 Pages: 1003-1015
- DOI
  10.1038/ismej.2012.171
- NAID
  120005323598
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23500371, KAKENHI-PROJECT-23710242, KAKENHI-PROJECT-24880003
[Journal Article] Rice Annotation Project Database (RAP-DB) : An integrative and interactive database for rice genomics2013
- Author(s)
  Hiroaki Sakai, Takashi Abe, Takeshi Itoh (他14名)
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: 54
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Rice Annotation Project Database (RAP-DB): An integrative and interactive database for rice genomics.2013
- Author(s)
  Sakai H, Lee SS, Tanaka T, Numa H, Kim J, Kawahara Y, Wakimoto H, Yang CC, Iwamoto M, Abe T, Yamada Y, Muto A, Inokuchi H, Ikemura T, Matsumoto T, Sasaki T, Itoh T.
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: 52
- DOI
  10.1093/pcp/pcs183
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23380045, KAKENHI-PROJECT-23710242, KAKENHI-PROJECT-24657114
[Journal Article] Nobel bioinformatics strategies for prediction of directional sequence changes in influenza virus genomes and for surveillance of potentially hazardous strains2013
- Author(s)
  Iwasaki Y, Abe T, Wada Y, Wada K, Ikemura T
- Journal Title
  
  BMC Infectious Diseases
  
  Volume: 13 Pages: 386-386
- DOI
  10.1186/1471-2334-13-386
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12J09979, KAKENHI-PROJECT-23710242
[Journal Article] Systematization of diversity of protein sequences in enzymes related to secondary metabolic pathways in plants in the context of big data biology inspired by KNApSAcK Motorcycle database2013
- Author(s)
  Shun Ikeda, Takashi Abe, Shigehiko Kanaya
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: 54 Pages: 711-727
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] A Novel Bioinformatics Strategy to Analyze Microbial Big Sequence Data for Efficient Knowledge Discovery : Batch-Learning Self-Organizing Map (BLSOM)2013
- Author(s)
  Iwasaki Y, Abe T. Wada K, Wada Y, Ikemura T
- Journal Title
  
  Microorganisms
  
  Volume: 1 Pages: 137-157
- DOI
  10.3390/microorganisms1010137
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12J09979, KAKENHI-PROJECT-23500371, KAKENHI-PROJECT-23710242
[Journal Article] A novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks2013
- Author(s)
  Ryo Nakao, Takashi Abe, Chihiro Sugimoto
- Journal Title
  
  ISME Journal
  
  Volume: 7 Pages: 1003-1015
- NAID
  120005323598
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Notable clustering of transcription-factor-binding motifs in human pericentric regions and its biological significance2013
- Author(s)
  Yuki Iwasaki, Takashi Abe, Toshimichi Ikemura(他3人)
- Journal Title
  
  Chromosome Research
  
  Volume: 21 Pages: 461-474
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Notable clustering of transcription-factor-binding motifs in human pericentric regions and its biological significance.2013
- Author(s)
  Iwasaki Y, Wada K, Wada Y, Abe T, Ikemura T
- Journal Title
  
  Chromosome Research
  
  Volume: 21 Pages: 461-474
- DOI
  10.1007/s10577-013-9371-y
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12J09979, KAKENHI-PROJECT-23710242
[Journal Article] Whole-genome sequencing of Theileria parva strains provides insight into parasite migration and diversification in the African continent2013
- Author(s)
  Kyoko Hayashida, Takashi Abe, Chihiro Sugimoto(他7人)
- Journal Title
  
  DNA Research
  
  Volume: 20 Pages: 209-220
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Microflorae of aquatic moss pillars in a freshwater lake, East Antarctica, based on fatty acid and 16S rRNA gene analyses.2012
- Author(s)
  Ryosuke Nakai, Takashi Abe, Tomoya Baba, Satoshi Imura, Hiroshi Kagoshima, Hiroshi Kanda, Atsuko Kanekiyo, Yuji Kohara, Akiko Koi, Keiko Nakamura, Takanori Narita, Hironori Niki, Katsuhiko Yanagihara, Takeshi Naganuma
- Journal Title
  
  Polar Biology
  
  Volume: 35 Pages: 425-43
- DOI
  10.1007/s00300-011-1090-2
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-11J30005, KAKENHI-PROJECT-23247012, KAKENHI-PROJECT-23510239, KAKENHI-PROJECT-23710242
[Journal Article] Diverse RuBisCO genes responsible for CO2 fixation in an Antarctic moss pillar2012
- Author(s)
  Ryosuke Nakai, Takashi Abe, Takeshi Naganuma(他8人)
- Journal Title
  
  Polar Biology
  
  Volume: 35 Pages: 1641-1650
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Eukaryotic phylotypes in aquatic moss pillars inhabiting a freshwater lake in East Antarctica, based on 18S rRNA gene analysis2012
- Author(s)
  Nakai R, Abe T, Baba T, Imura S, Kagoshima H, Kanda H, Kohara Y, Koi A, Niki H, Yanagihara K, Naganuma T
- Journal Title
  
  Polar Biology
  
  Volume: 35 Pages: 1495-1504
- DOI
  10.1007/s00300-012-1188-1
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-11J30005, KAKENHI-PROJECT-23247012, KAKENHI-PROJECT-23510239, KAKENHI-PROJECT-23710242
[Journal Article] インフルエンザウイルスゲノム配列の変化方向の予測2012
- Author(s)
  岩崎裕貴, 和田健之介, 阿部貴志, 池村淑道.
- Journal Title
  
  アドバンスシミュレーション
  
  Volume: 12 Pages: 56-57
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Eukaryotic phylotypes in aquatic moss pillars inhabiting a freshwater lake in East Antarctica, based on 18S rRNA gene analysis2012
- Author(s)
  Ryosuke Nakai, Takashi Abe, Takeshi Naganuma(他8人)
- Journal Title
  
  Polar Biology
  
  Volume: 35 Pages: 1495-1504
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Diverse RuBisCO genes responsible for CO2 fixation in an Antarctic moss pillar.2012
- Author(s)
  Nakai R, Abe T, Baba T, Imura S, Kagoshima H, Kanda H, Kohara Y, Koi A, Niki H, Yanagihara K, Naganuma T
- Journal Title
  
  Polar Biology
  
  Volume: 35 Pages: 1641-1650
- DOI
  10.1007/s00300-012-1204-5
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-11J30005, KAKENHI-PROJECT-23247012, KAKENHI-PROJECT-23510239, KAKENHI-PROJECT-23710242
[Journal Article] 新規情報学的手法を用いたインフルエンザウイルスのゲノム塩基配列の変化の方向性の予測2012
- Author(s)
  岩崎裕貴, 阿部貴志, 和田健之介, 池村淑道.
- Journal Title
  
  生物工学会誌
  
  Volume: 90 Pages: 769-772
- NAID
  110009580294
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] 新規情報学的手法を用いたインフルエンザウイルスのゲノム塩基配列の変化の方向性の予測2012
- Author(s)
  岩崎裕貴、阿部貴志、和田健之介、池村淑道
- Journal Title
  
  生物工学
  
  Volume: 90 Pages: 769-772
- NAID
  110009580294
- Data Source
  KAKENHI-PROJECT-23500371
[Journal Article] メタゲノム解析による微生物群集構造の解明への一括学習型自己組織化マップ（BLSOM）の活用2012
- Author(s)
  阿部貴志, 中尾亮, 杉本千尋.
- Journal Title
  
  生物工学会誌
  
  Volume: 90 Pages: 765-768
- NAID
  110009580293
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Comparative Genome Analysis of Three Eukaryotic Parasites with Differing Abilities To Transform Leukocytes Reveals Key Mediators of Theileria-Induced Leukocyte Transformation2012
- Author(s)
  Kyoko Hayashida, Yuichiro Hara, Takashi Abe (他27人)
- Journal Title
  
  mBio
  
  Volume: 3
- DOI
  10.1128/mbio.00204-12
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242, KAKENHI-PLANNED-22125009
[Journal Article] Microflorae of aquatic moss pillars in a freshwater lake, East Antarctica, based on fatty acid and 16S rRNA gene analyses2012
- Author(s)
  Ryosuke Nakai, Takashi Abe, Takeshi Naganuma(他8人)
- Journal Title
  
  Polar Biology
  
  Volume: 35 Pages: 425-433
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Metagenomic analysis of 0.2-μm-passable microorganisms in deep-sea hydrothermal fluid.2011
- Author(s)
  Ryosuke Nakai, Takashi Abe, Haruko Takeyama and Takeshi Naganuma.
- Journal Title
  
  Marine Biotechnology.
  
  Volume: 13 Pages: 900-908
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case.2011
- Author(s)
  Y.Iwasaki, T.Abe, K.Wada, M.Itoh, T.Ikemura (equal contributions)
- Journal Title
  
  DNA Research
  
  Volume: 18 Pages: 125-136
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] tRNADB-CE 2011 : tRNA gene database curated manually by experts.2011
- Author(s)
  T.Abe, T.Ikemura, J.Sugahara, A.Kanai, Y.Ohara, H.Uehara, M.Kinouchi, S.Kanaya, Y.Yamada, A.Muto, H.Inokuchi.
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 39
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries2011
- Author(s)
  Hiroshi Uehara, Toshimichi Ikemura, Takashi Abe(他2名)
- Journal Title
  
  Genes & Genetic Systems
  
  Volume: 86 Pages: 53-66
- NAID
  10029516253
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] tRNADB-CE 2011 : tRNA gene database curated manually by experts2011
- Author(s)
  T. Abe, T. Ikemura, Y. Ohara, H. Uehara, M. Kinouchi, S. Kanaya, Y. Yamada A.
- Journal Title
  
  Nucleic Acids Res
  
  Volume: Vol.37 Pages: 163-168
- DOI
  10.1093/nar/gkn692
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194, KAKENHI-PROJECT-23380045
[Journal Article] Metagenomic analysis of 0.2-μm-passable microorganisms in deep-sea hydrothermal fluid2011
- Author(s)
  R.Nakai, T.Abe, H.Takeyama, T.Naganuma
- Journal Title
  
  Marine Biotechnology
  
  Volume: 13(5) Pages: 900-908
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case.2011
- Author(s)
  Yuki Iwasaki, Takashi Abe, Kennosuke Wada, Mastic Itoh, Toshimichi Ikemura (equal contributions).
- Journal Title
  
  DNA Research 18
  
  Pages: 125-136
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] tRNADB-CE 2011 : tRNA gene database curated manually by experts2011
- Author(s)
  Abe T., Ikemura T., et.al.
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 39
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Metagenomic analysis of 0.2-μm-passable microorganisms in deep-sea hydrothermal fluid.2011
- Author(s)
  R.Nakai, T.Abe, H.Takeyama, T.Naganuma.
- Journal Title
  
  Marine Biotechnology
  
  Volume: (in press)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences2011
- Author(s)
  Iwasaki Y., Wada K., Itoh M., Ikemura T., Abe T.
- Journal Title
  
  WSOM 2011(J.Laaksonen and T.Honkela (Eds.))
  
  Volume: LNCS6731 Pages: 198-206
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] tRNADB-CE 2011: tRNA gene database curated manually by experts.2011
- Author(s)
  Takashi Abe, Toshimichi Ikemura, Junichi Sugahara, Akio Kanai, Yasuo Ohara, Hiroshi Uehara, Makoto Kinouchi, Shigehiko Kanaya, Yuko Yamada, Akira Muto, and Hachiro Inokuchi.
- Journal Title
  
  Nucleic Acids Research.
  
  Volume: 39
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries.2011
- Author(s)
  Hiroshi Uehara, Yuki Iwasaki, Chieko Wada, Toshimichi Ikemura, Takashi Abe
- Journal Title
  
  Genes & Genetic Systems 86
  
  Pages: 53-66
- NAID
  10029516253
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case2011
- Author(s)
  Iwasaki Y., Abe T., Wada K., Itoh M., Ikemura T.
- Journal Title
  
  DNA Research
  
  Volume: 18 Pages: 125-136
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences.2011
- Author(s)
  Yuki Iwasaki, Kennosuke Wada, Masae Itoh, Toshimichi Ikemura, and Takashi Abe.
- Journal Title
  
  Advances in Self-Organizing Maps.
  
  Volume: LNCS 6731 Pages: 198-206
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case2011
- Author(s)
  Yuki Iwasaki, Takashi Abe, Toshimichi Ikemura (他2人)
- Journal Title
  
  DNAResearch
  
  Volume: 18 Pages: 125-136
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries.2011
- Author(s)
  Uehara, H., Iwasaki, Y., Wada, C., Ikemura, T., Abe, T.
- Journal Title
  
  Genes Genet.Syst.
  
  Volume: 86 Pages: 53-66
- NAID
  10029516253
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries.2011
- Author(s)
  Hiroshi Uehara, Yuki Iwasaki, Chieko Wada, Kennosuke Wada, Toshimichi Ikemura, and Takashi Abe.
- Journal Title
  
  Genes & Genetic Systems.
  
  Volume: 86 Pages: 53-66
- NAID
  10029516253
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case.2011
- Author(s)
  Yuki Iwasaki†, Takashi Abe†, Kennosuke Wada, Masae Itoh, and Toshimichi Ikemura. († equal contributions)
- Journal Title
  
  DNA Research.
  
  Volume: 18 Pages: 125-136
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] tRNADB-CE 2011 : tRNA gene database curated manually by experts.2011
- Author(s)
  Takashi Abe, Toshimichi Ikemura, Junichi Sugahara, Akio Kanai, Yasuo Ohara, Hiroshi Uehara, Makoto Kinouchi, Shigehiko Kanaya, Yuko Yamada, Akira Muto, Hachiro Inokuchi
- Journal Title
  
  Nucleic Acids Research 39
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza AVirus Genome Sequences2011
- Author(s)
  Yuki Iwasaki, Toshimichi Ikemura, Takashi Abe(他2名)
- Journal Title
  
  WSOM2011
  
  Volume: LNCS 6731 Pages: 198-206
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] tRNADB-CE 2011 : tRNA gene database curated manually by experts2011
- Author(s)
  Takashi Abe, Toshimichi Ikemura, Hachiro Inokuchi(他8名)
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 39
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries2011
- Author(s)
  Uehara H., Iwasaki Y., Wada C., Ikemura T., Abe T.
- Journal Title
  
  Genes & Genetic Systems
  
  Volume: 86 Pages: 53-66
- NAID
  10029516253
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Metagenomic analysis of 0.2-μm-passable microorganisms in deep-sea hydrothermal fluid2011
- Author(s)
  Ryosuke Nakai, Takashi Abe, Haruko Takeyama and Takeshi Naganuma
- Journal Title
  
  Marine Biotechnology
  
  Volume: 13 Pages: 900-908
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23710242
[Journal Article] Approaches to understanding adaptations of skin color variation by detecting gene-environment interactions.2010
- Author(s)
  Sumiko Anno, Kazuhiko Ohshima, Takashi Abe
- Journal Title
  
  Expert Review ofMolecular Diagnosis 10
  
  Pages: 987-991
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Preliminary Evaluation of Batch-Learning Self-Organizing Map Algorithm on a Graphic Processor.2010
- Author(s)
  Akihiro Shitara, Yuri Nishikawa, Masato Yoshimi, Takashi Abe Toshimichi Ikemura, Hideharu Amano.
- Journal Title
  
  Proceedings ofParallel and Distributed Computing and Networks
  
  Pages: 676-89
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Preliminary Evaluation of Batch-Learning Self-Organizing Map Algorithm on a Graphic Processor2010
- Author(s)
  A.Shitara, Y.Nishikawa, M.Yoshimi, T.Abe, T.Ikemura, H.Amano
- Journal Title
  
  Proceedings of Parallel and Distributed Computing and Networks
  
  Pages: 676-89
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A novel bioinfonmatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses2009
- Author(s)
  Takashi Abe, Shigehiko Kanaya, Hiroshi Uehara, Toshimichi Ikemura
- Journal Title
  
  DNA Research 16
  
  Pages: 287-298
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] tRNADB-CE: tRNA gene database curated manually by experts.2009
- Author(s)
  Takashi Abe, Toshimichi Ikemura, Yasuo Ohara, Hiroshi Uehara, Makoto Kinouchi, Shigehiko Kanaya, Yuko Yamada, Akira Mum, Hachiro Inokuchi
- Journal Title
  
  Nucleic Acids Research 37
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A novel bioinformatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses2009
- Author(s)
  T. Abe, S. Kanaya, H. Uehara, T.
- Journal Title
  
  DNA Research
  
  Volume: 16 Pages: 287-298
- DOI
  10.1093/dnares/dsp018
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated2009
- Author(s)
  T.Abe, S.Kanaya, T.Ikemura
- Journal Title
  
  J.C.Principe and R.Miikkulainen(Eds.) : WSOM2009 LNCS 5629
  
  Pages: 1-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Intra-Species Diversity between Seven Bifidobacterium adolescentis Strains Identified by Genome-Wide Tiling Array Analysis.2009
- Author(s)
  Kazumasa Yasui, Mototsugu Tabata, Satoki Yamada, Takashi Abe, Toshimichi Ikemura, Ro Osawa, Tohru Suzuki
- Journal Title
  
  Biosci.Biotechnol.Biochem 73
  
  Pages: 1422-1424
- NAID
  10027542817
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers.2009
- Author(s)
  Takashi Abe, Yuta Hamano, Shigehiko Kanaya, Kennosuke Wada, Toshimichi Ikemura
- Journal Title
  
  IWANN 2009 Part I (J.Cabestany et al.(Eds.)), LNCS 5517
  
  Pages: 829-836
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated2009
- Author(s)
  T. Abe, S. Kanaya, T.
- Journal Title
  
  Proceedings of Workshop 2009 on Self-Organizing Maps
  
  Volume: Vol.5629 Pages: 1-9
- DOI
  10.1007/978-3-642-02397-2_1
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers2009
- Author(s)
  T.Abe, Y.Hamano, S.Kanaya, K.Wada, T.Ikemura
- Journal Title
  
  J.Cabestany et al.(Eds.): IWANN 2009 Part I, LNCS 5517
  
  Pages: 829-836
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated2009
- Author(s)
  T. Abe, S. Kanaya, T. Ikemura
- Journal Title
  
  Proceedings of Workshop 2009 on Self-Organizing Maps (accepted)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated.2009
- Author(s)
  T. Abe s. Kanaya, T. Ikemura
- Journal Title
  
  Proceedings of Workshop 2009 on Self-Organizing Maps accepted
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Intra-Species Diversity between Seven Bifidobacterium adolescentis Strains Identified by Genome-Wide Tiling Array Analysis2009
- Author(s)
  K.Yasui, M.Tabata, S.Yamada, T.Abe, T.Ikemura, R.Osawa, T.Suzuki
- Journal Title
  
  Biosci.Biotechnol.Biochem. 73
  
  Pages: 1422-1424
- NAID
  10027542817
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Novel bioinformatics for inter and intraspecies comparison of genome signatures in plant genomes2009
- Author(s)
  T.Abe, K.Wada, Y.Iwasaki, T.Ikemura
- Journal Title
  
  Plant Biotechnology 26
  
  Pages: 469-477
- NAID
  10026136401
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] オリゴヌクレオチド組成を用いた一括学習型自己組織化地図法によるA型インフルエンザウイルスの俯瞰的な特徴解明2009
- Author(s)
  岩崎裕貴、池村淑道、伊藤正恵、阿部貴志
- Journal Title
  
  第18回バイオ情報学研究会 Vol.2009-BIO-18 No5
  
  Pages: 1-6
- NAID
  110007990815
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Relationships between replication timing and GC content of cancer-related genes on human chromosomes llq and 21q2009
- Author(s)
  Y. Watanabe, T. Abe, T. Ikemura, M. Maekawa
- Journal Title
  
  Gene 433
  
  Pages: 26-31
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Novel bioinformatics for inter- and intraspecies comparison of genome signatures in plant genomes.2009
- Author(s)
  Takashi Abe, Kennosuke Wada, Yuki Iwasaki, Toshimichi Ikemura
- Journal Title
  
  Plant Biotechnology 26
  
  Pages: 469-477
- NAID
  10026136401
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] tRNADB-CE : tRNA gene database curated manually by experts2009
- Author(s)
  T. Abe, T. Ikemura, Y. Ohara, H. Uehara, M. Kinouchi, S. Kanaya, Y. Yamada, A. Muto, H. Inokuchi
- Journal Title
  
  Nucleic Acids Research 37
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers.2009
- Author(s)
  T.Abe, Y.Hamano, S.Kanaya, K.Wada, T.Ikemura
- Journal Title
  
  J.Cabestany, et al. (Eds. ) : IWANN2009 Part I, LNCS 5517
  
  Pages: 829-836
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers2009
- Author(s)
  T. Abe, Y. Hamano, S. Kanaya, K. Wada, T. Ikemura
- Journal Title
  
  Proceedings of the 10th International Work Conference on Artificial Neural Networks (accepted)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Intra-Species Diversity between Seven Bifidobacterium adolescentis Strains Identified by Genome-Wide Tiling Array Analysis2009
- Author(s)
  K.Yasui, M.Tabata, S.Yamada, T.Abe, T.Ikemura, R.Osawa, T.Suzuki
- Journal Title
  
  Biosci.Biotechnol.Biochem. 73
  
  Pages: 1422-1424
- NAID
  10027542817
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers.2009
- Author(s)
  T. Abe, Y. Hamano, S. Kanaya, K. Wada, T. Ikemura
- Journal Title
  
  Proceedings of the 10th International Work Conference on Artificial Neural Networks accepted
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A novel bioinformatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses2009
- Author(s)
  T.Abe, S.Kanaya, H.Uehara, T.Ikemura
- Journal Title
  
  DNA Research 16
  
  Pages: 287-298
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] tRNADB-CE : tRNA gene database curated manually by experts2009
- Author(s)
  T. Abe, T. Ikemura, Y. Ohara, H. Uehara, M. Kinouchi, S. Kanaya, Y. Yamada A. Muto, H Inokuchi
- Journal Title
  
  Nucleic Acids Research Vol. 37, Databaseissue
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Relationships between replication timing and GC content of cancer-related genes on human chromosomes 11q and 21q.2009
- Author(s)
  Yoshihisa Watanabe, Takashi Abe, Toshimichi Ikemura, Masato Maekawa
- Journal Title
  
  Gene 433
  
  Pages: 26-31
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated2009
- Author(s)
  T.Abe S.Kanaya, T.Ikemura
- Journal Title
  
  J.C.Principe and R.Miikkulainen(Eds.): WSOM 2009 LNCS 5629
  
  Pages: 1-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] A novel bioinformatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses2009
- Author(s)
  T.Abe, S.Kanaya, H.Uehara, T.Ikemura
- Journal Title
  
  DNA Research 16
  
  Pages: 287-298
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] A Large-Scale Genomics Studies Conducted with Batch-Learning SOM Utilizing High-Performance Supercomputers2009
- Author(s)
  T. Abe, Y. Hamano, S. Kanaya, K. Wada, T.
- Journal Title
  
  Proceedings of the 10th International Work Conference on Artificial Neural Networks
  
  Volume: Vol.5517 Pages: 829-836
- DOI
  10.1007/978-3-642-02478-8_104
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated.2009
- Author(s)
  Takashi Abe, Shigehiko Kanaya, Toshimichi Ikemura
- Journal Title
  
  WSOM 2009 (J.C.Principe and R.Miikkulainen (Eds.)), LNCS 5629
  
  Pages: 1-9
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] 遺伝分野の教育における高校と大学の連携の可能性2009
- Author(s)
  上原啓史, 阿部貴志, 池村淑道
- Journal Title
  
  遺伝 63
  
  Pages: 92-95
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota2008
- Author(s)
  Tomoyuki Kosaka, Souichiro Kato, Takefumi Shimoyama, Shunichi Ishii, Takashi Abe, and Kazuya Watanabe
- Journal Title
  
  Genome Res. 18
  
  Pages: 442-448
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota.2008
- Author(s)
  Tomoyuki Kosaka, Souichiro Kato, Takefumi Shimoyama, Shunichi Ishii, Takashi Abe, Kazuya Watanabe
- Journal Title
  
  Genome Research 18(13)
  
  Pages: 442-448
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota2008
- Author(s)
  T. Kosaka, S. Kato, T. Shimoyama, S. Ishii, T. Abe, K.
- Journal Title
  
  Genome Res
  
  Volume: 18(3) Pages: 442-448
- DOI
  10.1101/gr.7136508
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota2008
- Author(s)
  Tomoyuki Kosaka, Souichiro Kato, Takefumi Shimoyama, Shunichi Ishii, Takashi Abe, and Kazuya Watanabe
- Journal Title
  
  Genome Res. 18
  
  Pages: 442-448
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  CICSJ Bulletin(日本化学会情報化学部会誌) 26
  
  Pages: 20-22
- NAID
  130000091034
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法による新規情報学的手法の開発2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 31-33
- NAID
  130000091022
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/2/26_31/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobicmicrobiota2008
- Author(s)
  Tomoyuki Kosaka, Souichiro Kato, Takefumi Shimoyama, Shunichi Ishii, Takashi Abe, and Kazuya Watanabe
- Journal Title
  
  Genome Research 18
  
  Pages: 442-448
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] Interactions between SNP Alleles at Multiple Loci Contribute to Skin Color Differences between Caucasoid and Mongoloid Subjects2008
- Author(s)
  S. Anno, T. Abe, T. Yamamoto
- Journal Title
  
  International Journal of Biological Sciences 4
  
  Pages: 81-86
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota2008
- Author(s)
  Kosaka, T., Kato, S., Shimoyama, T., Ishii, S., Abe, T., Watanabe. K.
- Journal Title
  
  Genome Res. 18
  
  Pages: 442-448
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法による新規情報学的手法の開発2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 26
  
  Pages: 31-33
- NAID
  130000091022
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 20-22
- NAID
  130000091034
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/1/26_20/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] 持続可能型社会への貢献遺伝子データペース2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 17-19
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] 持続可能型社会への貢献遺伝子データベース2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 17-19
- NAID
  130000091033
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/1/26_17/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] エキスパートがキュレートしたtkNAデータベース2008
- Author(s)
  井口八郎, 小原康雄, 武藤あきら, 山田優子, 木ノ内誠, 前野聖, 金谷重彦, 池村淑道, 阿部貴志
- Journal Title
  
  日本化学会情報化学部会誌 26
  
  Pages: 11-16
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] 公的データベースからの有用遺伝子の発掘 : 持続可能型社会への貢献遺伝子データベースの構築と世界最高水準スーパーコンピュータの利用2008
- Author(s)
  池村淑道, 上原啓史, 棚橋佳世, 阿部貴志
- Journal Title
  
  日本化学会情報化学部会誌 26
  
  Pages: 40-44
- NAID
  130000091025
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] コーカソイドおよびモンゴロイドの皮膚色の違いに関与する多遺伝子座のSNP対立遺伝子の組み合わせについて2008
- Author(s)
  安納住子, 阿部貴志, 山本卓志
- Journal Title
  
  日本生理人類学会誌 13
  
  Pages: 1-7
- NAID
  110006633985
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法による新規情報学的手法の開発2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 31-33
- NAID
  130000091022
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota2008
- Author(s)
  T. Kosaka, S. Kato, T. Shimoyama, S. Ishii, T. Abe, K. Watanabe
- Journal Title
  
  Genome Research 18
  
  Pages: 442-448
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Interactions between SNP Alleles at Multiple Loci Contribute to Skin Color Differences between Caucasoid and Mongoloid Subjects2008
- Author(s)
  Sumiko Anno, Takashi Abe, Takushi Yamamoto
- Journal Title
  
  International Journal of Biological Sciences 4
  
  Pages: 81-86
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 26
  
  Pages: 20-22
- NAID
  130000091034
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] 公的データベースからの有用遺伝子の発掘:持続可能型社会への貢献遺伝子データベースの構築と世界最高水準スーパーコンピュータの利用2008
- Author(s)
  池村淑道, 上原啓史, 棚橋佳世, 阿部貴志
- Journal Title
  
  日本化学会情報化学部会誌
  
  Volume: Vol.26 Pages: 40-44
- NAID
  130000091025
- URL
  http://www.jstage.jst.go.jp/article/cicsj/26/2/26_40/_article/-char/ja/
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota2008
- Author(s)
  T. Kosaka, S. Kato, T. Shimoyama, S. Ishii, T. Abe, K. Watanabe
- Journal Title
  
  Genome Res 18(3)
  
  Pages: 442-448
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Interactions between SNP Alleles at Multiple Loci Contribute to Skin Color Differences between Caucasoid and Mongoloid Subjects.2008
- Author(s)
  Sumiko Anno, Takashi Abe, Takushi Yamamoto
- Journal Title
  
  International Journal of Biological Sciences 4
  
  Pages: 81-86
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] 公的データペースからの有用遺伝子の発掘 : 持続可能型社会への貢献遺伝子データベースの構築と世界最高水準スーパーコンピュータの利用2008
- Author(s)
  池村淑道, 上原啓史, 棚橋佳世, 阿部貴志
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 40-44
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  CICSJ Bulletin(日本化学会情報化学部会誌) 26
  
  Pages: 20-22
- NAID
  130000091034
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] Database for Genes Contributing to Sustainable World2008
- Author(s)
  Uehara, H., Tanahashi, K., Abe, T., Ikemura, T.
- Journal Title
  
  CICSJ Bulletin 26
  
  Pages: 17-19
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] An establishment of informatics method for an effective knowledge discovery from a massive amount of genomic sequences2008
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Journal Title
  
  CICSJ Bulletin 26
  
  Pages: 20-22
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] 持続可能型社会への貢献遺伝子データベース2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Journal Title
  
  CICSJ Bulletin(日本化学会情報化学部会誌) 26
  
  Pages: 17-19
- NAID
  130000091033
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] ゲノム配列情報からの効率的な知識発見のための情報学的手法の確立2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 Vol. 26
  
  Pages: 20-22
- NAID
  130000091034
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota2008
- Author(s)
  T., Kosaka, S., Kato, T., Shimoyama, S., Ishii, T., Abe and K., Watanabe
- Journal Title
  
  Genome Res. 18
  
  Pages: 442-448
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] 持続可能型社会への貢献遺伝子データベース2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Journal Title
  
  日本化学会情報化学部会誌 26
  
  Pages: 17-19
- NAID
  130000091033
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒトの皮膚色の多様性について2007
- Author(s)
  安納住子, 阿部貴志, 西良浩一, 工藤奨, 山本卓志, 緒方是嗣, Vijay K. Goel
- Journal Title
  
  日本生理人類学会誌 12
  
  Pages: 1-10
- NAID
  110006242744
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] Interactions between SNP Alleles at Multiple Loci Contribute to Variation in Skin Pigmentation in 122 Caucasians2007
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takushi Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Evolutionary Bioinformatics 3
  
  Pages: 169-178
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity-The Survey of SNP on 122 Caucasians-2007
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takushi Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Journal of Physiological Anthropology 26
  
  Pages: 278-279
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒトの皮膚色の多様性について2007
- Author(s)
  安納住子, 阿部貴志, 西良浩一, 工藤奨, 山本卓志, 緒方是嗣, Vijay K. Goel
- Journal Title
  
  日本生理人類学会誌 12・1
  
  Pages: 1-10
- NAID
  110006242744
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] Genome Information Broker for Viruses(GIB-V):Database for comparative analysis of virus genomes.2007
- Author(s)
  Masaki Hirahata, Takashi Abe, Naoto Tanaka, Yoshikazu Kuwana, Yasumasa Shigemoto, Satoru Miyazaki, Yoshiyuki Suzuki, Hideaki Sugawara.
- Journal Title
  
  Nucleic Acids Research 35
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒト皮膚色に関する人種差について2007
- Author(s)
  安納住子, 阿部貴志, 山本卓志
- Journal Title
  
  日本生理人類学会誌 12特別号2
  
  Pages: 136-137
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity-The Survey of SNP on 122 Caucasians-2007
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K.Goel
- Journal Title
  
  Journal of Physiological Anthropology, Proceedings Vol.26, No.2
  
  Pages: 278-279
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] Interaction with SNP allele in multiple loci contributes to human skin color diversity2007
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K.Goel
- Journal Title
  
  Journal of Physiological Anthropology Vol.12, No.1
  
  Pages: 1-10
- NAID
  110006242744
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] Self-Organizing Maps-its development and application2007
- Author(s)
  Abe, T., Ikemura, T., Kinouchi, M., Nakamura, Y., Maeno, H., Kanaya, S.
- Journal Title
  
  Springer Japan
  
  Pages: 12-12
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Self-Organizing Maps-its development and application2007
- Author(s)
  Matsuura, Y., Abe, T., Ikemura, T., Tokutaka, H., Ohkita, M.
- Journal Title
  
  Springer Japan
  
  Pages: 5-5
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] ヒト皮膚色関連遺伝子多型の探索およびRS/GISを用いた遺伝子多型の空間的拡散に関する考察2007
- Author(s)
  安納住子, 阿部貴志, 山本卓志
- Journal Title
  
  日本生理人類学会誌 12特別号1
  
  Pages: 128-129
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity - The Survey of SNP on 122 Caucasians -2007
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Journal of Physiological Anthropology, Proceedings 26・2
  
  Pages: 278-279
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒトの皮膚色の多様性について2007
- Author(s)
  安納住子, 阿部貴志, 西良浩一, 工藤奨, 山本卓志, 緒方是嗣, Vijay K. Goel
- Journal Title
  
  日本生理人類学会誌 12・1
  
  Pages: 1-10
- NAID
  110006242744
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] Characterization of Genetic Signal Sequences with Batch-Learning SOM2007
- Author(s)
  Takashi Abe, Shun Ikeda, Shigehiko Kanaya, Kennosuke Wada, and Toshimichi Ikemura
- Journal Title
  
  Proceedings of Workshop 2007 on Self-Organizing Maps
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] A large-scale Self-Organizing Map(SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity (1)2006
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K.Goel
- Journal Title
  
  Journal of Physiological Anthropology Vol.11(Supplement),No.1
  
  Pages: 30-31
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] Self-Organizing Map (SOM) unveils and visualizes hidden sequence characteristics of a wide range of eukaryote genomes2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S. and Ikemura, T
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity (1)2006
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Journal of Physiological Anthropology, Proceedings 25・26
  
  Pages: 384-384
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] Self-Organizing Map(SOM) unveils and visualizes hidden sequence characteristics of a wide range of eukaryote genomes2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity (1)2006
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K.Goel
- Journal Title
  
  Journal of Physiological Anthropology, Proceedings Vol.25, No.6
  
  Pages: 384-384
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒトの皮膚色の多様性について(1)2006
- Author(s)
  安納住子, 阿部貴志, 西良浩一, 工藤奨, 山本卓志, 緒方是嗣, Vijay K. Goel
- Journal Title
  
  日本生理人類学会誌 11・特別号(1)
  
  Pages: 30-31
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sepuence fragments derived from mixed genomes of uncultured environmental microbes2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
  
  Pages: 103-112
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒトの皮膚色の多様性について (1)2006
- Author(s)
  安納住子, 阿部貴志, 西良浩一, 工藤奨, 山本卓志, 緒方是嗣, Vijay K. Goel
- Journal Title
  
  日本生理人類学会誌 11・特別号1
  
  Pages: 30-31
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S. and Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
  
  Pages: 103-112
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity (1)2006
- Author(s)
  Sumiko Anno, Takashi Abe, koichi Sairyo, Susumu kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Journal of Physiological Anthropology, Proceedings 25・6
  
  Pages: 384-384
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] Comparasite: a database for comparative study of transcriptomes of parasites defined by full-length cDNAs2006
- Author(s)
  Watanabe, J.
- Journal Title
  
  Nucleic Acids Research Database issue
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17208026
[Journal Article] Sequences from almost all prokaryotic, eukaryotic, and viral genomes available could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Journal of the earth simulator 6
  
  Pages: 17-23
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] Sequences from almost all prokaryotic, eukaryotic, and viral genomes available could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator,2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Sequences from almost all prokaryotic, eukaryotic, and viral genomes available could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes.2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouch, M., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] Research Signpost, Chromatin and Gene Expression2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Kosaka, Y., Ikemura, T.
- Journal Title
  
  DNA Structure
  
  Pages: 16-16
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Kinouchi, M., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] A useful bioinformatics suite for retrieving and analyzing microbial genome data (G-InforBIO)2006
- Author(s)
  Tanaka, N., Abe, T., Miyazaki S., Sugawara, H
- Journal Title
  
  Journal of Computer Aided Chemistry 7
  
  Pages: 87-93
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] Sequences from almost all prokaryotic, eukaryotic, and viral genomes available could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒトの皮膚色の多様性について(1)2006
- Author(s)
  安納住子, 阿部貴志, 西良浩一, 工藤奨, 山本卓志, 緒方是嗣, Vijay K. Goel
- Journal Title
  
  日本生理人類学会誌 11・特別号(1)
  
  Pages: 30-31
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
  
  Pages: 103-112
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of environmental uncultured microbes.2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S., Ikemura, T.
- Journal Title
  
  Polar Bioscience 20
  
  Pages: 103-112
- Data Source
  KAKENHI-PROJECT-18018015
[Journal Article] Bisulfite sequencing and dinucleotide content analysis of 15 imprinted mouse differentially methylated regions (DMRs) : paternally methylated DMRs contain less CpGs than maternally methylated DMRs2006
- Author(s)
  Kobayashi, H., Suda, C., Abe, T., Kohara, Y., Ikemura, T., Sasaki, H.
- Journal Title
  
  Cytogenet Genome Res. 113
  
  Pages: 130-137
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Sequences from almost all prokaryotic,eukaryotic,and viral genomes a vailable could be classified according to genomes on a large-scale Self-Organizing Map constructed with the Earth Simulator2006
- Author(s)
  Abe, T., Sugawara, H., Kanaya, S. and Ikemura, T.
- Journal Title
  
  Journal of the Earth Simulator 6
  
  Pages: 17-23
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18570216
[Journal Article] G-InforBIO : Integrated system for microbial genomics2006
- Author(s)
  Tanaka, N., Abe, T., Miyazaki S., Sugawara, H
- Journal Title
  
  BMC Bioinformatics 7
  
  Pages: 368-368
- Data Source
  KAKENHI-PROJECT-18710176
[Journal Article] Interaction with SNP Allele in Multiple Loci Contributes to Human Skin Color Diversity (1)2006
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Journal of Physiological Anthropology, Proceedings 25・6
  
  Pages: 384-384
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes.2006
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  Gene 365
  
  Pages: 27-34
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A novel bioinformatics strategy for phylogenetic study of genomic sequence fragments : Self-Organizing Map (SOM) of oligonucleotide frequencies,2005
- Author(s)
  Abe, T.Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps, 2005
  
  Pages: 669-676
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A novel bioinformatics strategy for phylogenetic study of genomic sequence fragments : Self-Organizing Map (SOM) of oligonucleotide frequencies2005
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps
  
  Pages: 669-676
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology (In press)
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from unchltured micobe mixtures in environmental and clinical samples.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes.2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Direct cloning of genes encoding novel xylanases from humangut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 51
  
  Pages: 251-259
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] A large-scale Self-Organizing Map (SOM) constructed with the Earth Simulator unveils sequence characteristics of a wide range of eukaryotic genomes.2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Matsuura, Y., Tokutaka, H., Ikemura, T.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps 2005
  
  Pages: 187-194
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Ikemura, T.
- Journal Title
  
  DNA Research 12
  
  Pages: 281-290
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes.2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T, Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes.2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology (In press)
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A large-scale Self-Organizing Map (SOM) constructed with the Earth Simulator unveils sequence characteristics of a wide range of eukaryotic genomes2005
- Author(s)
  Abe, T., Sugawara, H., Kinouchi, M., Kanaya, S., Matsuura, Y., Tokutaka, H., Ikemura, T.
- Journal Title
  
  Proceedings of Workshop 2005 on Self-Organizing Maps
  
  Pages: 187-194
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes2005
- Author(s)
  Uchiyama, T., Abe, T., Ikemura, T., Watanabe, K.
- Journal Title
  
  Nature Biotechnology 23
  
  Pages: 88-93
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 51
  
  Pages: 251-259
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] A novel bioinformatics strategy for phylogenetic study of genomic sequence fragments : Self-Organizing Map (SOM) of oligonucleotide frequencies,2005
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Workshop 2005 Self-Organizing Maps 2005
  
  Pages: 669-676
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto, M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 51
  
  Pages: 251-259
- Data Source
  KAKENHI-PROJECT-17019018
[Journal Article] Direct cloning of genes encoding novel xylanases from human gut2005
- Author(s)
  Hayashi, H., Abe, T., Sakamoto M., Ohara, H., Ikemura, T., Sakka, K., Benno, Y.
- Journal Title
  
  Canadian Journal of Microbiology 57
  
  Pages: 251-259
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Genome informatics for unveiling hidden genome signatures2004
- Author(s)
  Abe, T., Kanaya, S., Kinouchi, M., Ikemura, T.
- Journal Title
  
  Proceedings of the Institute of Statistical Mathematics 52
  
  Pages: 207-215
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Novel genome informatics for unveiling hidden signatures in genome sequences : self-organizing map (SOM) of oligonucleotide frequencies2004
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Information-Based Induction Sciences
  
  Pages: 94-99
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] Genome informatics for unveiling hidden genome signatures2004
- Author(s)
  Abe, T., Kanaya, S., Kinouchi, M., Ikemura, T.
- Journal Title
  
  Proceedings of the Institute of Statistical Mathematics 52
  
  Pages: 207-215
- Data Source
  KAKENHI-PROJECT-16014225
[Journal Article] Novel genome informatics for unveiling hidden signatures in genome sequences : self-organizing map (SOM) of oligonucleotide frequencies2004
- Author(s)
  Abe, T., Ikemura, T., Kanaya, S., Kinouchi, M., Sugawara, H.
- Journal Title
  
  Proceedings of Information-Based Induction Sciences
  
  Pages: 94-99
- Data Source
  KAKENHI-PROJECT-16570190
[Journal Article] Interactions between SNP Alleles at Multiple Loci Contribute to Variation in Skin Pigmentation in 122 Caucasians
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Evolutionary Bioinformatics Online (投稿中)
- Data Source
  KAKENHI-PROJECT-18657083
[Journal Article] Interactions between SNP Alleles at Multiple Loci Contribute to Variation in Skin Pigmentation in 122 Caucasians
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K.Goel
- Journal Title
  
  Evolutionary Bioinformatics Online (In press)
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Journal Article] Metagenomic analysis of 0.2-μm-passable microorganisms in deep-sea hydrothermal fluid.
- Author(s)
  Ryosuke Nakai, Takashi Abe, Haruko Takeyama, Takeshi Naganuma
- Journal Title
  
  Marine Biotechnology in press
- Data Source
  KAKENHI-PROJECT-20700273
[Journal Article] Microflorae of aquatic moss pillars in a freshwater lake, East Antarctica, based on fatty acid and 16S rRNA gene analyses
- Author(s)
  Nakai R., Abe T., et al
- Journal Title
  
  Polar Biology
  
  Volume: (In press)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20510194
[Journal Article] Interactions between SNP Alleles at Multiple Loci Contribute to Variation in Skin Pigmentation in 122 Caucasians
- Author(s)
  Sumiko Anno, Takashi Abe, Koichi Sairyo, Susumu Kudo, Takuji Yamamoto, Koretsugu Ogata, Vijay K. Goel
- Journal Title
  
  Evolutionary Bioinformatics Online (印刷中)
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16370108
[Presentation] An AI strategy for detecting HGT relies on nucleotide compositional features.2019
- Author(s)
  Takashi Abe, Yu Akazawa, Tomoya Baba, Toshimichi Ikemura.
- Organizer
  第42回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-17K00401
[Presentation] Prognostic significance of radiologic features of pneumonitis induced by anti-PD-1 therapy.2019
- Author(s)
  S. Watanabe, T. Ota, M. Hayashi, H. Ishikawa, T. Miyabayashi, M. Terada, K. Sato, T. Ishida, H. Tanaka, A. Iwashima, S. Shoji, K. Nozaki, K. Ichikawa, R. Kondo, H. Yoshizawa, T. Kikuchi
- Organizer
  2019 American Society of Clinical Oncology Annual Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18KT0019
[Presentation] Phylogeographic analysis of respiratory syncytial virus in Japan during 2012-20172018
- Author(s)
  Ryosuke Ito, Akinobu Hibino, Ikumi Tanabe, Takashi Odagiri, Takashi Abe, Reiko Saito
- Organizer
  第66回日本ウイルス学会学術集会
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K10043
[Presentation] 微生物ゲノムとメタゲノムからの効率的な知識発見に向けて2018
- Author(s)
  阿部貴志
- Organizer
  木村資生記念第2回進化学セミナー
- Invited
- Data Source
  KAKENHI-PROJECT-17K00401
[Presentation] The ecology, phyiology and genetics of electrochemically active bacteria (EAB)2018
- Author(s)
  Kazuya Watanabe
- Organizer
  59th Annual Conference of Association of Microbiologists of India
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] A phase II study evaluating continuation of EGFR-TKIs beyond progressive disease followed by the addition of CDDP+PEM+Bev2018
- Author(s)
  S. Shoji, S. Watanabe, K. Nozaki, K. Ichikawa, R. Kondo, S. Miura, M. Okajima, T. Abe, H. Tanaka, J. Tanaka, H. Yoshizawa, H. Kagamu, T. Kikuchi;
- Organizer
  The 19th World Conference on Lung Cancer
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18KT0019
[Presentation] ゲノムデータベース、ゲノムアノテーション2018
- Author(s)
  阿部貴志
- Organizer
  統合データベース講習会AJACS越後
- Invited
- Data Source
  KAKENHI-PROJECT-17K00401
[Presentation] ウイルスゲノムの連続塩基組成を活用した効率的な知識発見2018
- Author(s)
  阿部貴志
- Organizer
  進化学会第20回大会
- Invited
- Data Source
  KAKENHI-PROJECT-17K00401
[Presentation] 遺伝子の水平伝播とアミノ酸組成からみた微生物の南極環境への適応戦略の解明2017
- Author(s)
  赤澤優、阿部貴志、仁木宏典、馬場知哉
- Organizer
  第11回日本ゲノム微生物学会年会
- Place of Presentation
  慶應義塾大学　湘南藤沢キャンパス（神奈川県、藤沢市）
- Year and Date
  2017-03-02
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Isolation of exoelectrogens from rice paddy-field soil by using a novel electrode plate-culture method2017
- Author(s)
  Nagayoshi UEOKA, Atsushi KOUZUMA, Kazuya WATANABE
- Organizer
  International Meeting of The International Society for Microbial Electrochemistry and Technology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] ゲノムデータからの効率的な知識発見に向けた一括学習型自己組織化マップの活用．2017
- Author(s)
  阿部貴志
- Organizer
  第27回日本数理生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-17K00401
[Presentation] Bioelectrochemical production of ammonia from atmospheric dinitrogen2017
- Author(s)
  Shohei Yamada, Koji Takizawa, Atsushi Kouzuma, and Kazuya Watanabe
- Organizer
  The 16th International Symposium on Advanced Technology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] The ecology and evolution of methanogens in anaerobic digesters2017
- Author(s)
  Kazuya WATANABE
- Organizer
  Annual Meeting on Microbial Ecology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] シニア研究者の専門知識を活用したtRNA遺伝子データベースtRNADB-CEの運用．2017
- Author(s)
  阿部貴志
- Organizer
  日本遺伝学会第89回大会
- Invited
- Data Source
  KAKENHI-PROJECT-17K00401
[Presentation] Conductive carbon nanomaterials inhibit methanogens2017
- Author(s)
  Kazuki FUJINAWA, Atsushi KOUZUMA1, Yoshiyuki UENO2, Kazuya WATANABE
- Organizer
  International Meeting of The International Society for Microbial Electrochemistry and Technology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] 南極にみる遺伝子の水平伝播ワールド2016
- Author(s)
  馬場知哉, 阿部貴志, 豊田敦, 中井亮佑, 長沼毅, 藤山秋佐夫 , 神田啓史, 本山秀明, 伊村智, 仁木宏典
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜（神奈川県、横浜市）
- Year and Date
  2016-11-30
- Invited
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] 連続塩基組成に基づくウイルスゲノムの多様性の解明．2016
- Author(s)
  阿部貴志
- Organizer
  第1回内在性ウイルス様エレメント研究会
- Place of Presentation
  京都大学（京都府京都市）
- Invited
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] BLSOM 解析による微生物の南極環境への適応戦略の解明2016
- Author(s)
  阿部貴志、中道真喜、吉田淳一郎、仁木宏典、馬場知哉
- Organizer
  第10回日本ゲノム微生物学会年会
- Place of Presentation
  東京工業大学（東京都、目黒区）
- Year and Date
  2016-03-04
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Phylogenetic estimation and classification of metagenomic sequences on the basis of batch-learning self-organizing map.2016
- Author(s)
  Takashi Abe, Shigehiko Kanaya, and Toshimichi Ikemura.
- Organizer
  ISME2016
- Place of Presentation
  Montreal (Canada)
- Year and Date
  2016-08-21
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] A bioinformatics analysis for efficient knowledge discovery from big sequence data with BLSOM2016
- Author(s)
  阿部貴志
- Organizer
  第89回日本細菌学会総会
- Place of Presentation
  大阪国際交流センター
- Year and Date
  2016-03-23
- Invited
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] A bioinformatics analysis for efficient knowledge discovery from big sequence data with BLSOM2016
- Author(s)
  阿部貴志
- Organizer
  第89回日本細菌学会年会
- Place of Presentation
  大阪国際交流センター（大阪府、大阪市）
- Year and Date
  2016-03-23
- Invited
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] BLSOM解析による微生物の南極環境への適応戦略の解明2016
- Author(s)
  阿部貴志，中道真喜，吉田惇一郎，仁木宏典，馬場知哉．
- Organizer
  第10回日本ゲノム微生物学会年会
- Place of Presentation
  東京工業大学
- Year and Date
  2016-03-04
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] エネルギー代謝表現型の亜種間差に関わる遺伝子発現動態の探索2016
- Author(s)
  高田豊行、近藤伸二、矢坂　拓、阿部貴志、清澤秀孔、鈴木　穣、豊田　敦、藤山秋佐夫、城石俊彦
- Organizer
  日本遺伝学会第88回大会
- Place of Presentation
  三島
- Year and Date
  2016-09-07
- Data Source
  KAKENHI-PROJECT-16H04686
[Presentation] First isolation of Chlamydiae from an ixodid tick collected in Japan2016
- Author(s)
  Nakao R, Abe T, Qiu Y, Thu MJ, Sugimoto C
- Organizer
  16th International Symposium on Microbial Ecology
- Place of Presentation
  Montreal, Canada
- Year and Date
  2016-09-21
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K14850
[Presentation] Environmental adaptation of polar bacteria;‘To be, or not to be frozen.’2016
- Author(s)
  Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  第10回日本ゲノム微生物学会年会
- Place of Presentation
  東京工業大学（東京都、目黒区）
- Year and Date
  2016-03-04
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Genomic Evolutions of Polar Bacteria2015
- Author(s)
  Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  The 6th Symposium on Polar Science
- Place of Presentation
  国立極地研究所（東京都、立川市）
- Year and Date
  2015-11-16
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Morphological characteristics of Shewanella biofilms formed on graphite electrodes in bioelectrochemical systems2015
- Author(s)
  Miho Kitayama, Atsushi Kouzuma, Kazuya Watanabe
- Organizer
  BioMicroWorld
- Place of Presentation
  Univ. Barcelona
- Year and Date
  2015-10-28
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] 自己圧縮BLSOM（一括学習型自己組織化マップ）による水平伝播領域検出法の開発．2015
- Author(s)
  松本光司，菊池亮仁，池村淑道，阿部貴志．
- Organizer
  日本遺伝学会第87回大会
- Place of Presentation
  東北大学
- Year and Date
  2015-09-24
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] Molecular mechanisms for sensing and responding to electrode potentials in Shewanella oneidensis MR-12015
- Author(s)
  Atsumi Hirose, Atsushi Kouzuma, Kazuya Watanabe
- Organizer
  BioMicroWorld
- Place of Presentation
  Univ. Barcelona
- Year and Date
  2015-10-28
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] Genomic features of uncultured methylotrophs in activated-sludge microbiomes grown under different enrichment procedures2015
- Author(s)
  Kazuki Fujinawa, Yusuke Asai, Morio Miyahara, Atsushi Kouzuma, Kazuya Watanabe
- Organizer
  日本微生物生態学会2015年年会
- Place of Presentation
  霞ヶ浦亀城プラザ
- Year and Date
  2015-10-17
- Data Source
  KAKENHI-PROJECT-15H01753
[Presentation] オリゴペプチド組成類似性に基づく機能未知のタンパク質の機能推定法の確立．2015
- Author(s)
  五十嵐諒，池村淑道，阿部貴志．
- Organizer
  日本遺伝学会第87回大会
- Place of Presentation
  東北大学
- Year and Date
  2015-09-24
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] 一括学習型自己組織化マップ（BLSOM）を用いたタンパク質機能推定システムの開発.2014
- Author(s)
  大蔵徳丸, 池村淑道, 阿部貴志.
- Organizer
  第8回日本ゲノム微生物学会年会
- Place of Presentation
  東京都, 東京農業大学
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] メタゲノム解析による活性汚泥中に生息する有用な微生物の探索.2014
- Author(s)
  熊谷鷹佑, 阿部貴志, 中田俊芳, 佐藤修正, 平川英樹, 近藤昭宏, 池村淑道, 松井和彦.
- Organizer
  第8回日本ゲノム微生物学会年会
- Place of Presentation
  東京都, 東京農業大学
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] 北極・南極Pseudomonas属細菌のゲノムレベルでの低温環境適応2014
- Author(s)
  馬場知哉、阿部貴志、豊田敦、中井亮佑、長沼毅、藤山秋佐夫、伊村智、神田啓史、本山秀明、仁木宏典
- Organizer
  第８回　日本ゲノム微生物学会　年会
- Place of Presentation
  東京農業大学（東京都世田谷区）
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] 環境微生物群集の地球レベルでの俯瞰的把握に向けた海洋メタゲノム配列を対象にした比較解析.2014
- Author(s)
  市川圭介, 池村淑道, 阿部貴志.
- Organizer
  第8回日本ゲノム微生物学会年会
- Place of Presentation
  東京都, 東京農業大学
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] Novel bioinformatics strategies to analyze influenza virus genome signature and its evolution from massive viral genome sequences, using Batch-Learning Self Organizing Map (BLSOM).2013
- Author(s)
  Yuki Iwasaki, Takashi Abe, Kennosuke Wada, Yoshiko Wada, Kouki Yonezawa and Toshimichi Ikemura
- Organizer
  SMBE2013
- Place of Presentation
  Chicago, USA
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] インフルエンザウイルスRNAゲノムの宿主適応に関連したgenome signatureの変化に関する新規情報解析2013
- Author(s)
  岩﨑裕貴、阿部貴志、和田健之介、和田佳子、米澤弘毅、池村淑道
- Organizer
  第15回RNA学会年会
- Place of Presentation
  愛媛
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] BLSOM解析を活用したマダニ媒介性病原体の検索2013
- Author(s)
  中尾亮、阿部貴志、山本正悟、Nijhof Ard、Jongejan Frans、池村淑道、杉本千尋
- Organizer
  第7回日本ゲノム微生物学会年会
- Place of Presentation
  長浜バイオ大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] tRNADB-CE: tRNA gene database curated manually by experts.2013
- Author(s)
  Takashi Abe, Hachiro Inokuchi, Yuko Yamada, Akira Muto and Toshimichi Ikemura.
- Organizer
  第36回日本分子生物学会年会
- Place of Presentation
  兵庫県, 神戸国際会議場
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] インフルエンザウイルスゲノムの宿主環境に依存したgenome signatureの変化の方向性及びそこからの変異予測を行うための新規情報解析2013
- Author(s)
  岩﨑裕貴、阿部貴志、和田健之介、和田佳子、米澤弘毅、池村淑道
- Organizer
  第61回ウイルス学会学術集会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 一括学習型自己組織化マップ (BLSOM) 法と学習ベクトル量子化 (LVQ) 法を組み合わせたインフルエンザウイルスゲノムからの特徴抽出2013
- Author(s)
  金田卓馬、岩﨑裕貴、池村淑道、阿部貴志
- Organizer
  第61回ウイルス学会学術集会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] インフルエンザウイルスゲノムの宿主環境に依存したgenome signatureの変化に関する新規情報解析2013
- Author(s)
  岩﨑裕貴、阿部貴志、和田健之介、和田佳子、米澤弘毅、池村淑道
- Organizer
  日本進化学会第15回つくば大会
- Place of Presentation
  筑波大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] Bacterial Genome-wide Adaptation to a Lake Environment in East Antarctica2013
- Author(s)
  Tomoya BABA, Takashi ABE, Atsushi TOYODA, Kentaro FUKUTA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  第10回　SCAR (Scientific Committee on Antarctic Research)　生物学シンポジウム
- Place of Presentation
  スペイン、バルセロナ
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] BLSOMを利用したtRNA遺伝子の特徴抽出2013
- Author(s)
  池村淑道、岩崎裕貴、三宅雄大、和田健之介、和田佳子、山田優子、武藤昱、井口八郎、阿部貴志
- Organizer
  第7回日本ゲノム微生物学会年会
- Place of Presentation
  長浜バイオ大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] ゲノムアノテーション2013
- Author(s)
  阿部貴志
- Organizer
  統合データベース講習会：AJACS琉球
- Place of Presentation
  沖縄県, 琉球大学
- Invited
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] RNAウイルスと宿主因子の相互作用を検出するための手法の開発2013
- Author(s)
  小倉歩、馮麗利、岩﨑裕貴、阿部貴志、和田健之介、和田佳子、池村淑道
- Organizer
  第7回日本ゲノム微生物学会年会
- Place of Presentation
  長浜バイオ大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] tRNADB-CEで公開した全tRNA遺伝子を対象とした自己組織化マップ解析2012
- Author(s)
  岩崎裕貴、阿部貴志、池村淑道, 他
- Organizer
  第6回日本ゲノム微生物学会年会
- Place of Presentation
  東京(口頭)
- Year and Date
  2012-03-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] tRNADB-CE: エキスパートがキュレートしたtRNA遺伝子データベース2012
- Author(s)
  阿部貴志, 井口八郎, 木ノ内誠, 金谷重彦, 菅原潤一, 金井明夫, 山田優子, 武藤昱, 池村淑道.
- Organizer
  第14回日本RNA学会年会
- Place of Presentation
  仙台
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] メタゲノム解析による活性汚泥中の微生物群集構造の解明2012
- Author(s)
  阿部貴志、中田俊芳、佐藤修正、平川英樹、近藤昭宏、杉本千尋、池村淑道
- Organizer
  第6回日本ゲノム微生物学会年会
- Year and Date
  2012-03-12
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] RNAウイルスの宿主依存機構を知るための宿主RNAとの類似領域の検出2012
- Author(s)
  岩崎裕貴、秋葉太貴、小倉歩、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  第14回日本RNA学会年会
- Place of Presentation
  東北大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 新規情報学的手法を用いた膨大な量のインフルエンザウイルスゲノムからの特徴抽出2012
- Author(s)
  岩崎裕貴、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  第6回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Year and Date
  2012-03-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] RNA ウイルスの宿主依存機構の解明を目的とした宿主由来RNA との類似領域の検出2012
- Author(s)
  岩崎裕貴、和田健之介、秋葉太貴、小倉歩、阿部貴志、池村淑道
- Organizer
  日本遺伝学会第84回大会
- Place of Presentation
  九州大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 一括学習型自己組織化マップ（BLSOM）を用いたメタゲノム配列に対する系統推定法の開発2012
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道.
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  博多
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] RNAウイルスの宿主依存機構に関連したウイルスゲノム進化2012
- Author(s)
  岩崎裕貴、秋葉太貴、小倉歩、阿部貴志、和田健之介、池村淑道
- Organizer
  日本進化学会第14回大会
- Place of Presentation
  首都大学東京
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] A Novel Bioinformatics Study of Oligonucleotide and Peptide Compositions in Influenza Virus Genomes in the Context to Its Host Adaptation2012
- Author(s)
  岩崎裕貴, 阿部貴志, 和田健之介, 伊藤正恵, 池村淑道
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  福岡国際会議場
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 新規情報学的手法を用いた膨大な量のインフルエンザウイルスゲノムからの特徴抽出2012
- Author(s)
  岩崎裕貴、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] メタゲノム解析による活性汚泥中の微生物群集構造の解明2012
- Author(s)
  阿部貴志、杉本千尋、池村淑道, 他
- Organizer
  第6回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Year and Date
  2012-03-12
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] メタゲノム解析による活性汚泥中の微生物群集構造の解明2012
- Author(s)
  阿部貴志, 中田俊芳, 佐藤修正, 平川英樹, 近藤昭宏, 杉本千尋, 池村淑道, 松井和彦.
- Organizer
  第6回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] A novel bioinformatics strategy to investigate sequence characteristics in influenza virus genomes related with their host-adaptaion mechanisms2011
- Author(s)
  岩崎裕貴、池村淑道、和田健之介、伊藤正恵、阿部貴志
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 転移RNA遺伝子データベース"tRNADB-CE"を用いた転移RNA二次構造のin silico大規模解析2011
- Author(s)
  井口八郎、池村淑道、武藤あきら、山田優子、阿部貴志
- Organizer
  日本遺伝学会第3回大会
- Place of Presentation
  京都
- Year and Date
  2011-09-21
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences2011
- Author(s)
  Yuki Iwasaki, Kennosuke Wada, Masae Itoh, Toshimichi Ikemura, and Takashi Abe
- Organizer
  Workshop on Self-Organizing Map 2011
- Place of Presentation
  Espoo, Finland
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 大量ゲノム配列情報からの効率的な知識発見のための新規情報学的手法の開発とその微生物ゲノム解析への適用2011
- Author(s)
  阿部貴志
- Organizer
  ゲノム微生物学会総会・2011年ゲノム微生物学会研究奨励賞受賞者講演
- Place of Presentation
  東北大学
- Year and Date
  2011-08-20
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Prediction of directional changes of influenza A virus genome sequences using BLSOM with emphasis on pandemic H1N1/092011
- Author(s)
  Takashi Abe
- Organizer
  SMBE 2011(招待講演)
- Place of Presentation
  Kyoto Japan
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] A novel evolutionary study to predict directional changes of influenza A virus genome sequences2011
- Author(s)
  Yuki Iwasaki, Kennosuke Wada, Masae Itoh, Takashi Abe, and Toshimichi Ikemura
- Organizer
  SMBE 2011
- Place of Presentation
  Kyoto Japan
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] Prediction of Directional Changes of Influenza A Virus Genome Sequences using BLSOM with Emphasis on Pandemic H1N1/09.2011
- Author(s)
  Yuki Iwasaki, Kennosuke Wada, Masae Itoh, Toshimichi Ikemura, and Takashi Abe.
- Organizer
  Society for Molecular Biology and Evolution 2011(招待講演)
- Place of Presentation
  Kyoto, Japan
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] Metagenomic analysis for unveiling of microbial diversities within tick guts2011
- Author(s)
  Takashi Abe, Ryo Nakao, Toshimichi Ikemura, Frans Jongejan, and Chihiro Sugimoto
- Organizer
  International Union of Microbiological Societies 2011 Congress
- Place of Presentation
  Sapporo, Japan
- Year and Date
  2011-09-08
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] Metagenomic analysis for unveiling of microbial diversities within tick guts.2011
- Author(s)
  Takashi Abe, Ryo Nakao, Toshimichi Ikemura, Frans Jongejan, and Chihiro Sugimoto.
- Organizer
  International Union of Microbiological Societies 2011 Congress(招待講演)
- Place of Presentation
  Sapporo, Japan
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] 一括学習型自己組織化マップ(BLSOM)を用いた環境由来メタゲノム配列からの環境微生物群集構造の推定2011
- Author(s)
  大井学、岩崎裕貴、和田健之介、池村淑道、阿部貴志
- Organizer
  第5回日本ゲノム微生物学会年会
- Year and Date
  2011-03-16
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences2011
- Author(s)
  Yuki Iwasaki, Kennosuke Wada, Masae Itoh, Toshimichi Ikemura, and Takashi Abe
- Organizer
  Workshop on Self-Organizing Map 2011
- Place of Presentation
  Espoo, Finland
- Year and Date
  2011-06-15
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] tRNADB-CE:エキスパートがキュレートしたtRNA遺伝子データベース2011
- Author(s)
  阿部貴志、池村淑道, 他
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 全地球レベルの環境微生物多様性を把握・俯瞰するための新規情報学的手法の開発2011
- Author(s)
  阿部貴志
- Organizer
  静岡大学GPLバイオサイエンスセミナー
- Place of Presentation
  静岡大学(招待講演)
- Year and Date
  2011-06-24
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 新規情報学的手法を用いたヒト腸内ならびに環境メタゲノム配列群からの効率的な知識発見2011
- Author(s)
  阿部貴志、上原啓史、金谷重彦、池村淑道
- Organizer
  第151回日本獣医学会学術集会
- Place of Presentation
  東京
- Year and Date
  2011-03-31
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 新規情報学的手法を用いた宿主適応に関連したインフルエンザウイルスゲノムの進化学的解析2011
- Author(s)
  岩崎裕貴、池村淑道、和田健之介、伊藤正恵、阿部貴志
- Organizer
  日本遺伝学会第3回大会
- Place of Presentation
  京都
- Year and Date
  2011-09-20
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Metagenomic approach to identify tick-borne pathogens by using ultra high throughput DNA sequencing and data analyzing technologies2011
- Author(s)
  Chihiro Sugimoto, Ryo Nakao, Toshimichi Ikemura, Frans Jongejan, Takashi Abe
- Organizer
  6th International Meeting on Rickettsiae and Rickettsial Diseases
- Place of Presentation
  City Auditorium (Zaragoza, Spain)
- Year and Date
  2011-09-01
- Data Source
  KAKENHI-PROJECT-23255016
[Presentation] Unveiling of microbial diversities within tick guts by analyzing metagenomic sequences with Batch Learning Self-Organizing Map (BLSOM).2011
- Author(s)
  Takashi Abe, Ryo Nakao, Toshimichi Ikemura, Frans Jongejan, and Chihiro Sugimoto.
- Organizer
  7th International Conference on Ticks and Tick-borne Pathogens (TTP-7)
- Place of Presentation
  Zaragoza, Spain
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] Metagenomic approach to identify tick-borne pathogens by using ultra high throughput DNA sequencing and data analyzing technologies2011
- Author(s)
  Chihiro Sugimoto, Ryo Nakao, Toshimichi Ikemura, Frans Jongejan, and Takashi Abe
- Organizer
  7th International Conference on Ticks and Tick-borne Pathogens (TTP-7)
- Place of Presentation
  Zaragoza, Spain
- Year and Date
  2011-08-28
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] 一括学習型自己組織化マップによるメタゲノム配列群を対象とした環境微生物群衆構造推定法の開発2011
- Author(s)
  阿部貴志、大井学、上原啓史、岩崎裕貴、和田健之介、池村淑道
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] tRNADB-CE : tRNA gene database curated manually by experts2011
- Author(s)
  T.Abe, T.Ikemura, et al
- Organizer
  RNA 2011
- Place of Presentation
  Kyoto, Japan
- Year and Date
  2011-06-17
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 全地球レベルの環境微生物多様性を把握・俯瞰するための新規情報学的手法の開発2011
- Author(s)
  阿部貴志
- Organizer
  静岡大学GPLバイオサイエンスセミナー
- Place of Presentation
  静岡大学
- Year and Date
  2011-06-24
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A Novel Bioinformatics Strategy to Predict Direcitional Changes of Influenza A Virus Genome Sequences2011
- Author(s)
  Iwasaki Y., Wada K., Itoh M., Ikemura T., Abe T.
- Organizer
  Workshop on Self-Organizing Map 2011
- Place of Presentation
  Espoo, Finland
- Year and Date
  2011-06-15
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A novel bioinformatics study of Influenza virus genomes focusing on sequence difference between strains isolated from different host sources.2011
- Author(s)
  Yuki Iwasaki, Toshimichi Ikemura, kennosuke Wada, Masae Itoh and Takashi Abe
- Organizer
  IUMS 2011
- Place of Presentation
  Sapporo, Japan
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 新規情報学的手法を用いた宿主適応に関連したインフルエンザウイルスゲノムの進化学的解析2011
- Author(s)
  岩崎裕貴、池村淑道、和田健之介、伊藤正恵、阿部貴志
- Organizer
  日本遺伝学会大会
- Place of Presentation
  京都
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] Visualization of Genome Signatures with BLSOM and its Application to Eukaryotic and Viral genomes2011
- Author(s)
  Takashi Abe, Yuki Iwasaki, Hiroshi Uehara, Yuuta Hamano, Kennosuke Wada and Toshimichi Ikemura
- Organizer
  Society for Molecular Biology and Evolution 2011
- Place of Presentation
  Kyoto, Japan
- Year and Date
  2011-07-26
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] A novel bioinformatics study of Influenza virus genomes focusing on sequence difference between strains isolated from different host sources2011
- Author(s)
  Iwasaki Y., Ikemura T., Wada K., Itoh M., Abe T.
- Organizer
  IUMS 2011
- Place of Presentation
  Sapporo, Japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Prediction of directional changes of influenza A virus genome sequences using BLSOM with emphasis on pandemic H1N1/092011
- Author(s)
  Takashi Abe
- Organizer
  SMBE 2011
- Place of Presentation
  Kyoto Japan
- Year and Date
  2011-07-27
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Visualization of Genome Signatures with BLSOM and its Application to Eukaryotic and Viral genomes.2011
- Author(s)
  Takashi Abe, Yuki Iwasaki, Hiroshi Uehara, Yuuta Hamano, Kennosuke Wada and Toshimichi Ikemura.
- Organizer
  Society for Molecular Biology and Evolution 2011(招待講演)
- Place of Presentation
  Kyoto, Japan
- Data Source
  KAKENHI-PROJECT-23710242
[Presentation] 一括学習型自己組織化マップ法によるメタゲノム配列解析を対象にした環塊微生物群集構造の解明2010
- Author(s)
  阿部貴志、大井学、伊藤輝二、岡田和典、岩崎裕貴、和田健之介、金谷重彦、池村淑道
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸(口頭/ポスター)
- Year and Date
  2010-12-08
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] メタゲノム配列データによる個人ゲノム解読を含む大量配列解析の時代に必要となる人材の育成、並びにシニア世代研究者との共同作業によるデータベースの高品質化(ポスター)2010
- Author(s)
  上原啓史、阿部貴志、中泉友紀、池田俊、金谷重彦、池村淑道
- Organizer
  統合データベースプロジェクトシンポジウム2010
- Place of Presentation
  東京
- Year and Date
  2010-10-05
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] tRNADB-CEを用いたメタゲノム配列データに対する新規分子系統マーカーとしてのtRNA遺伝子の利用2010
- Author(s)
  阿部貴志, 井口八郎, 上原啓史, 山田優子,武藤〓, 池村淑道
- Organizer
  日本進化学会第12回東京大会
- Place of Presentation
  東京(口頭)
- Year and Date
  2010-08-02
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] Knowledge discovery and database construction for Genes Contributing to "Sustainable World" and Human Health2010
- Author(s)
  H. Uehara, T. Ikemura, H. Inokuchi, C. Wada, Y. Yamada, A. Muto, Y. Ohara, T. Abe
- Organizer
  Biocuration 2010
- Place of Presentation
  Okinawa, Japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] tRNADB-CE :エキスパートがキュレートシタtRNAデータベース2010
- Author(s)
  阿部貴志、池村淑道、小原康雄、上原啓史、木ノ内誠、金谷重彦、菅原潤一、金井明夫、山田優子、武藤〓、井口八郎
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸(ポスター)
- Year and Date
  2010-12-09
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] オリゴペプチド組成に基づく一括学習型自己組織化マップ(BLSOM)法を用いた機能未知のタンパク質類の機能推定法の確立2010
- Author(s)
  阿部貴志, 上原啓史, 金谷重彦, 池村淑道
- Organizer
  第4回日本ゲノム微生物学会
- Place of Presentation
  博多
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Knowledge discovery, database construction for Genes Contributing to "Sustainable World" and "Human Health" & tRNA Gene Database Curated manually by Experts under collaboration with undergraduate students and senior scientists.2010
- Author(s)
  Hiroshi Uehara, Toshimichi Ikemura, Hachiro Inokuchi, Chieko Wada, Yuko Yamada, Akira Muto, Yasuo Ohara, Takashi Abe
- Organizer
  Biocuration 2010
- Place of Presentation
  Tokyo
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] tRNADB-CE : tRNA gene database curated manually by experts2010
- Author(s)
  阿部貴志, 池村淑道, 小原康雄, 上原啓史, 木ノ内誠, 菅原潤一, 金井明夫, 金谷重彦, 山田優子, 井口八郎
- Organizer
  23rd tRNA workshop, (oral)
- Place of Presentation
  Aveiro, Portugal
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 環境ゲノム資源からの環境改善に役立つ有用タンパク質遺伝子セットの新規情報学的な手法による探索2010
- Author(s)
  上原啓史、和田千恵子、中泉友紀、古田亜耶乃、岩崎裕貴、池村淑道、阿部貴志
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸(ポスター)
- Year and Date
  2010-12-09
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] tRNADB-CE : Trna gene database curated manually by experts.2010
- Author(s)
  Takashi Abe, Toshimichi Ikemura, yasuo Ohara, Hiroshi Uehara, Makoto Kinouchi, Junichi Sugahara, Akio Kanai, Shigehiko Kanaya, Yuko Yamada, Akira Muto, Hachiro Inokuchi
- Organizer
  23rd Trna workshop
- Place of Presentation
  Aveiro, Portugal(oral)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 一括学習型自己組織化マップ法によるメタゲノム配列解析を対象にした環境微生物群集構造の解明2010
- Author(s)
  阿部貴志, 大井学, 伊藤輝二, 岡田和典, 岩崎裕貴, 和田健之介, 金谷重彦, 池村淑道
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸
- Year and Date
  2010-12-08
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 新規情報学的手法を用いたインフルエンザウイルスゲノムの変化方向の予測2010
- Author(s)
  岩崎裕貴、阿部貴志、和田健之介、伊藤正恵、池村淑道、小笠原直毅、金谷重彦
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸(口頭/ポスター)
- Year and Date
  2010-12-10
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 環境ゲノム資源からの環境改善に役立つ有用タンパク質遺伝子セットの新規情報学的な手法による探索2010
- Author(s)
  上原啓史, 和田千惠子, 中泉友紀, 古田亜耶乃, 岩崎裕貴, 池村淑道, 阿部貴志
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸
- Year and Date
  2010-12-09
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Visualization of genome signatures, its application to virus, eukaryote genomes(oral)2010
- Author(s)
  T.Abe, Y.Iwasaki, H.Uehara, K.Wada, T.Ikemura
- Organizer
  An International Meeting honouring Jacques Monod on the 100th Anniversary of his birth, the 40th Anniversary of his book
- Place of Presentation
  Ravello, Italy
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 一括学習型自己組織化マップ法によるメタゲノム配列解析を対象にした環境微生物群集構造の解明2010
- Author(s)
  阿部貴志, 大井学, 伊藤輝二, 岡田和典, 岩崎裕貴, 和田健之介, 金谷重彦, 池村淑道
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸(口頭/ポスタ)
- Year and Date
  2010-12-08
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] メタゲノム配列データに対する新規分子系統マーカーとしてのtRNA遺伝子の利用2010
- Author(s)
  阿部貴志、井口八郎、上原啓史、山田優子、武藤あきら、池村淑道
- Organizer
  日本遺伝学会第82回大会
- Place of Presentation
  札幌(口頭)
- Year and Date
  2010-09-20
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 環境ゲノム資源からの環境改善に役立つ有用タンパク質遺伝子の新規情報学的な手法による探索2010
- Author(s)
  上原啓史, 和田千惠子, 中泉友紀, 岩崎裕貴, 池村淑道, 阿部貴志
- Organizer
  日本遺伝学会第82回大会
- Place of Presentation
  札幌
- Year and Date
  2010-09-20
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部教育としての健康への貢献遺伝子データベース～抗生物質生産遺伝子を中心とした遺伝子探索～2010
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第4回日本ゲノム微生物学会
- Place of Presentation
  福岡
- Year and Date
  2010-03-07
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Visualization ofgenome signatures and its application to virus and eukaryote genomes2010
- Author(s)
  Takashi Abe, Yuki Iwasaki, Hiroshi Uehara, Kennosuke Wada, Toshimichi Ikemura
- Organizer
  An International Meeting honouring Jacques Monod on the 100th Anniversary of his birth and the 40th Anniversary ofhis book
- Place of Presentation
  Ravello, Italy(oral)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] tRNADB-CE:エキスパートがキーユレートしたtRNA遺伝子データベース2009
- Author(s)
  阿部貴志, 池村淑道, 小原康雄, 上原啓史, 平野晋也, 木ノ内誠, 金谷重彦, 菅原潤一, 金井明夫, 山田優子, 武藤〓, 井口八郎
- Organizer
  RNA学会第11回大会
- Place of Presentation
  新潟(口頭)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] Diversity of green-like ribulose-1,5-bisphosphate carboxylase/oxygenase(RuBisCO)Large-subunit genes in an Antarctic moss pillar2009
- Author(s)
  R.Nakai, T.Abe, T.Baba, S.Imura, H.Kagoshima, H.Kanda, Y.Kohara, T.Naganuma, H.Niki, K.Yanagihara
- Organizer
  Xth SCAR International Biology Symposium, (Oral)
- Place of Presentation
  Hokkaido Univ., Sapporo
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部教育としての「健康」ならびに「持続可能型社会」への貢献遺伝子データベース構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第82回日本生化学会大会(ポスタ).
- Place of Presentation
  ポートアイランド(神戸)
- Year and Date
  2009-10-23
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A型インフルエンザウイルスの全ゲノム配列を対象とした新規情報学的手法による俯瞰的可視化とそこからの効率的知識発見2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、池村淑道
- Organizer
  第57回日本ウイルス学会学術集会(ポスタ).
- Place of Presentation
  都市センターホテル(東京)
- Year and Date
  2009-10-25
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T. Abe, S. Kanaya, T. Ikemura
- Organizer
  Xth SCAR International Biology Symposium
- Place of Presentation
  Hokkaido Univ., Sapporo
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部教育としての健康ならびに持続可能型社会への貢献遺伝子データベース構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  統合データベースプロジェクトンポジウム2009(ポスタ)
- Place of Presentation
  東大本郷(東京)
- Year and Date
  2009-06-12
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 健康への貢献ならびに持続可能型社会への貢献遺伝子データベース2009
- Author(s)
  上原啓史, 阿部貴志, 中泉夕紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures and functions of metagenome sequences using Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T. Abe, S. Kanaya, T. Ikemura
- Organizer
  International Symposium on Marine Genomics 2009
- Place of Presentation
  Okinawa,japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化地図法による全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化地図法による全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2009
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型自己組織化マップ法2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ).
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] エキスパートがキュレートしたtRNA遺伝子データベース2009
- Author(s)
  阿部貴志、小原康雄、上原啓史、中泉友紀、平野晋也、木ノ内誠、金谷重彦、山田優子、武藤呈、井口八郎、池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部教育としての「健康」ならびに「持続可能型社会」への貢献遺伝子データベース構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  第82回日本生化学会大会(ポスタ)
- Place of Presentation
  ポートアイランド(神戸)
- Year and Date
  2009-10-23
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部生シニア世代の共同作業としての「高精度・高機能な遺伝子データベース」の構築とその利用2009
- Author(s)
  阿部貴志、小原康雄、上原啓史、平野晋也、木ノ内誠、金谷重彦、菅原潤一、金井明夫、山田優子、武藤〓、井口八郎、池村淑道
- Organizer
  日本遺伝学会第18回大会(口頭)
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 環境微生物ゲノム配列からのお宝遺伝子発掘の学部や高校教育における活用2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  日本遺伝学会第18回大会(口頭)
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部生とシニア世代の共同作業としての健康への貢献遺伝子データベース構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ)
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 全地球レベルの環境微生物多様性を把握・俯瞰するための新規情報学手法の開発2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第11回日本進化学会大会(ポスタ)
- Place of Presentation
  北海道大学(札幌)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] オリゴヌクレオチド組成を用いた一括学習型自己組織化地図法によるA型インフルエンザウイルスの俯瞰的な特徴解明2009
- Author(s)
  岩崎裕貴、池村淑道、伊藤正恵、阿部貴志
- Organizer
  第18回バイオ情報学研究会
- Place of Presentation
  北海道大学(札幌)
- Year and Date
  2009-09-17
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部生シニア世代の共同作業としての「高精度・高機能な遺伝子データベース」の構築とその利用2009
- Author(s)
  阿部貴志、小原康雄、上原啓史、平野晋也、木ノ内誠、金谷重彦、菅原潤一、金井明夫、山田優子、武藤〓、井口八郎、池村淑道
- Organizer
  日本遺伝学会第81回大会
- Place of Presentation
  長野(口頭)
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 全インフルエンザAウィルスを対象にした新規情報学的手法による俯瞰的可視化とそにからの知識発見2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、和田健之介、池村淑道
- Organizer
  日本遺伝学会第18回大会(口頭).
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-18
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 環境微生物ゲノム配列からのお宝遺伝子発掘の学部や高校教育における活用2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  日本遺伝学会第81回大会
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] インフルエンザウイルスを中心としたウイルスゲノムの新規情報学的手法による解析2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型自己組織化マップ法2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ)
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-10
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 一括学習型自己組織化地図法による全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  東京(口頭)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] A型インフルエンザウイルスの全ゲノム配列を対象とした一括学習型自己組織化マップ法(BL-SOM)による効率的な知識発見とその応用2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、和田健之介、池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ).
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  Xth SCAR, International Biology Symposium, (Poster)
- Place of Presentation
  Hokkaido Univ., Sapporo
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] tRNADB-CE:エキスパートがキュレートしたtRNA遺伝子データベース2009
- Author(s)
  阿部貴志, 池村淑道, 小原康雄, 上原啓史, 平野晋也, 木ノ内誠, 金谷重彦, 菅原潤一, 金井明夫, 山田優子, 武藤〓, 井口八郎
- Organizer
  RNA学会第11回大会(Oral)
- Place of Presentation
  朱鷺メッセ(新潟)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 全地球レベルの環境微生物多様性を把握・俯瞰するための新規情報学手法の開発2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第11回日本進化学会大会
- Place of Presentation
  北海道
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A型インフルエンザウイルスの全ゲノム配列を対象とした一括学習型自己組織化マップ法(BL-SOM)による効率的な知識発見とその応用2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、和田健之介、池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ)
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] tRNADB-CE:エキスパートがキュレートしたtRNA遺伝子データベース2009
- Author(s)
  阿部貴志, 池村淑道, 小原康雄, 上原啓史, 平野晋也, 木ノ内誠, 金谷重彦, 菅原潤一, 金井明夫, 山田優子, 武藤〓, 井口八郎
- Organizer
  第32回日本分子生物学会年会(ポスタ)
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T.Abe, S.Kanaya, T.Ikemura
- Organizer
  Xth SCAR International Biology Symposium, (Poster)
- Place of Presentation
  Hokkaido Univ., Sapporo
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures and functions of metagenome sequences using Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  International Symposium on Marine Genomics 2009(Oral)
- Place of Presentation
  Okinawa, Japan
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 一括学習型自己組織化地図法による全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] オリゴヌクレオチド組成を用いた一括学習型自己組織化地図法によるA型インフルエンザウイルスの俯瞰的な特徴解明2009
- Author(s)
  岩崎裕貴、池村淑道、伊藤正恵、阿部貴志
- Organizer
  第18回バイオ情報学研究会(口頭).
- Place of Presentation
  北海道大学(札幌)
- Year and Date
  2009-09-17
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 全地球レベルの環境微生物多様性を把握・俯瞰するための新規情報学手法の開発2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第11回日本進化学会大会(ポスタ)
- Place of Presentation
  北海道大学(札幌)
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Unveiling microbial diversity of uncultured environmental microbe mixtures and functions of metagenome sequences using Batch Learning Self-Organizing Map (BLSOM).2009
- Author(s)
  Takashi Abe,Shigehiko Kanaya, Toshimichi Ikemura.
- Organizer
  International Symposium on Marine Genomics 2009 Oral
- Place of Presentation
  Okinawa, Japan
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 全インフルエンザAウィルスを対象にした新規情報学的手法による俯瞰的可視化とそこからの知識発見2009
- Author(s)
  岩崎裕貴、阿部貴志、伊藤正恵、和田健之介、池村淑道
- Organizer
  日本遺伝学会第81回大会
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-18
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 健康への貢献ならびに持続可能型社会への貢献遺伝子データベース2009
- Author(s)
  上原啓史, 阿部貴志, 中泉夕紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部生とシニア世代の共同作業としての"健康への貢献遺伝子データベース"構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千惠子, 井口八郎, 池村淑道
- Organizer
  第32回日本分子生物学会年会(ポスタ).
- Place of Presentation
  パシフィコ横浜(横浜)
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 健康への貢献ならびに持続可能型社会への貢献遺伝子データベース2009
- Author(s)
  上原啓史, 阿部貴志, 中泉夕紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  中央大学、東京
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] エキスパートがキュレートしたtRNA遺伝子データベース2009
- Author(s)
  阿部貴志、小原康雄、上原啓史、平野晋也、木ノ内誠、金谷重彦、菅原潤一、金井明夫、山田優子、武藤〓、井口八郎、池村淑道
- Organizer
  統合データベースプロジェクトシンポジウム2009(ポスタ)
- Place of Presentation
  東大本郷(東京)
- Year and Date
  2009-06-12
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部教育としての健康ならびに持続可能型社会への貢献の下遺伝子データベース構築2009
- Author(s)
  上原啓史, 阿部貴志, 中泉友紀, 和田千恵子, 井口八郎, 池村淑道
- Organizer
  統合データベースプロジェクトンポジウム2009(ポスタ).
- Place of Presentation
  東京大学(東京)
- Year and Date
  2009-06-12
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] エキスパートがキュレートしたtRNA遺伝子データベース2009
- Author(s)
  阿部貴志、小原康雄、上原啓史、中泉友紀、平野晋也、木ノ内誠、金谷重彦、山田優子、武藤〓、井口八郎、池村淑道
- Organizer
  第3回微生物ゲノム学会
- Place of Presentation
  東京(口頭)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] Unveiling microbial diversity of uncultured environmental michobe mixtures and functions of metagenome sepuences using Batch Learning Self-Organizing Map(BLSOM)2009
- Author(s)
  T.Abe, S.Kanaya, T.Ikemura
- Organizer
  International Symposium on Marine Genomics 2009(Oral)
- Place of Presentation
  Okinawa, Japan
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Diversity of green-like ribulose-1, 5-bisphosphate carboxylase/oxygenase(RuBisCO) Large-subunit genes in an Antarctic moss pillar2009
- Author(s)
  R. Nakai, T. Abe, T. Baba, S. Imura, H. Kagoshima, H. Kanda, Y. Kohara, T. Naganuma, H. Niki, K. Yanagihara
- Organizer
  Xth SCAR International Biology Symposium
- Place of Presentation
  Hokkaido Univ., Sapporo
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部生シニア世代の共同作業としての「高精度・高機能な遺伝子データベース」の構築とその利用2009
- Author(s)
  阿部貴志、小原康雄、上原啓史、平野晋也、木ノ内誠、金谷重彦、菅原潤一、金井明夫、山田優子、武藤〓、井口八郎、池村淑道
- Organizer
  日本遺伝学会第81回大会
- Place of Presentation
  信州大学(長野)
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型自己組織化マップ法2009
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2009-12-10
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Database for Genes Contributing to Sustainable World : retrieval of useful genes from a massive amount of environmental sequences obtained by large-scale metagenome analyses.2008
- Author(s)
  Uehara, H., Tanahashi, K., Abe, T., Ikemura, T.
- Organizer
  The 2nd Annual Meeting for the Society of Genome Microbiology, Japan
- Place of Presentation
  Osaka
- Year and Date
  2008-03-06
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 一括学習型自己組織化地図法(Batch Learning Self-Organizing Map:SOM)による環境微生物ゲノム群集の解明2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋(口頭)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 持続可能型社会ならびに健康への貢献遺伝子データペース2008
- Author(s)
  上原啓史, 阿部貴志, 棚橋佳世, 陳キン, 陸嘉俊, 田中秀和, 池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] A novel bioinformatics strategy for prediction of functions of a massive amount of poorly-characterized protein genes obtained by metagenome studies2008
- Author(s)
  T. Abe, S. Kanaya, H. Uehara, T. Ikemura
- Organizer
  XX International Congress of Genetics
- Place of Presentation
  the International Congress Centrum, Berlin. Germany
- Year and Date
  2008-07-17
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Phylogenetic characterization of non-rRNA sequences from uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map (BLSOM).2008
- Author(s)
  T. Abe, H. Sugawara, S. Kanaya, T. Ikemura
- Organizer
  XXXI Symposium on Polar Biology
- Place of Presentation
  The National Institute of Polar Research, Tokyo, Japan
- Year and Date
  2008-12-03
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 世界最高水準スーパーコンピュータで可能になる、全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  バイオスーパーコンピューティング・シンポジウム(BSCS) 2008
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] エキスパートがキュレートしたtRNAデータベース2008
- Author(s)
  阿部貴志、池村淑道、小原康雄、武藤あきら、山田優子、上原啓史、木ノ内誠、金谷重彦、井口八郎
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋(口頭)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 一括学習型自己組織化地図法(Batch-Leaming Self-Organizing Map : BLSOM)による環境生物ゲノム由来断片配列からの知識発見2008
- Author(s)
  阿部貴志、金谷重彦、池村叔道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] A novel bioinformatics strategy for prediction of functions of a massive amount of poorly-characterized protein genes btained by metagenome studies.2008
- Author(s)
  Takashi Abe, Shigehiko Kanaya, Hiroshi Uehara, Toshimichi Ikemura.
- Organizer
  XX International Congress of Genetics(Oral)
- Place of Presentation
  Berlin, Germany)
- Year and Date
  2008-07-17
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 一括学習型自己組織化地図法(Batch-LearningSelf-Organizing Map:BLSOM)による環境生物ゲノム由来断片配列からの知識発見2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸(ポスタ・口頭)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] A novel bioinformatics strategy for prediction of functions of a massive amount of poorly-characterized protein genes obtained by metagenome studies2008
- Author(s)
  T. Abe, S. Kanaya, H. Uehara, T.
- Organizer
  International Congress of Genetics
- Place of Presentation
  Berlin, Germany
- Year and Date
  2008-07-17
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 世界最高水準スーパーコンピュータで可能になる、全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  バイオスーパーコンピューティング・シンポジウム(BSCS)2008
- Place of Presentation
  MY PLAZAホール、東京
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] A novel bioinformatics strategy for prediction of functions of a massive amount of poorly-characterized protein genes obtained by metagenome s tudies2008
- Author(s)
  T. Abe, S. Kanaya, H. Uehara, T. Ikemura
- Organizer
  XX International Congress of Genetics
- Place of Presentation
  the International Congress Centrum, Berlin, Germany
- Year and Date
  2008-07-17
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] エキスパートがキュレートしたtRNAデータベース2008
- Author(s)
  阿部貴志、池村淑道、小原康雄、武藤あきら、山田優子、上原啓史、木ノ内誠、金谷重彦、井口人郎
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋大学、名古屋
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 持続可能型社会ならびに健康への貢献遺伝子データベース2008
- Author(s)
  上原啓史、阿部貴志、棚橋佳世、陳キン、陸嘉俊、田中秀和、池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] Phylogenetic characterization of non-rRNA sequences from uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map (BLSOM)2008
- Author(s)
  T. Abe, H. Sugawara, S. Kanaya, T. Ikemura
- Organizer
  XXXI Symposium on Polar Biolo
- Place of Presentation
  The National Institute of Polar Research, Tokyo, Japan
- Year and Date
  2008-12-03
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 持続可能型社会への貢献遺伝子データベース〜膨大な環境由来メタゲノム配列からの有用遺伝子探索2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Organizer
  第2回日本ゲノム微生物学会年会
- Place of Presentation
  大阪
- Year and Date
  2008-03-06
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] 一括学習型自己組織化地図法(Batch Learning Self-Organizing Map : SOM)による環境微生物ゲノム群集の解明2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋大学、名古屋
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部教育におけるDDBJの活用について2008
- Author(s)
  阿部貴志
- Organizer
  DDBJing講習会
- Place of Presentation
  国立遺伝学研究所、三島
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] Phylogenetic characterization of non-rRNA sequences from uncultured environmental microbe mixtures on the basis of Batch Learning Self-Organizing Map (BLSOM).2008
- Author(s)
  Takashi Abe, Hideaki Sugawara, Shigehiko Kanaya, Toshimichi Ikemura.
- Organizer
  XXXI Symposium on Polar Biology (Oral)
- Place of Presentation
  Tokyo, Japan
- Year and Date
  2008-12-03
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 一括学習型自己組織化地図法(Batch Learning Self-Organizing Map : SOM)による環境微生物ゲノム群集の解明2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋大学、名古屋
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 一括学習型自己組織化地図法(Batch-Learning Self-Organizing Map : BLSOM)による環境生物ゲノム由来断片配列からの知識発見2008
- Author(s)
  阿部貴志, 金谷重彦, 池村叔道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 学部教育におけるDDBJの活用について2008
- Author(s)
  阿部貴志
- Organizer
  DDBJing講習会
- Place of Presentation
  三島(講師)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部教育としての健康への貢献遺伝子データベース構築2008
- Author(s)
  上原啓史、阿部貴志、棚橋佳世、池村淑道
- Organizer
  日本遺伝学会第80回大会
- Place of Presentation
  名古屋大学、名古屋
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 学部教育としての健康への貢献遺伝子データベース構築2008
- Author(s)
  上原啓史、阿部貴志、池村叔道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 持続可能型社会ならびに健康への貢献遺伝子データベース2008
- Author(s)
  上原啓史、阿部貴志、棚橋佳世、陳キン、陸嘉俊、田中秀和、池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] エキスパートがキュレートしたtRNA遺伝子データベース2008
- Author(s)
  阿部貴志、池村淑道、小原康雄、上原啓史、中泉友紀、平野晋也、木ノ内誠、金谷重彦、山田優子、武藤あきら、井口八郎
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド、神戸
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 持続可能型社会への貢献遺伝子データベース〜膨大な環境由来メタゲノム配列からの有用遺伝子探索2008
- Author(s)
  上原啓史, 棚橋佳世, 阿部貴志, 池村淑道
- Organizer
  第2回日本ゲノム微生物学会年会
- Place of Presentation
  大阪
- Year and Date
  2008-03-06
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 一括学習型自己組織化地図法(Batch-Learning Self-Organizing Map : BLSOM)による環境生物ゲノム由来断片配列からの知識発見2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] 世界最高水準スーパーコンピュータで可能になる、全ゲノム・全タンパク質配列を対象にした大規模ポストゲノム解析2008
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  バイオスーパーコンピューティング・シンポジウム(BSCS)2008
- Place of Presentation
  MY PLAZA ホール、東京
- Data Source
  KAKENHI-PROJECT-20510194
[Presentation] オリゴペプタイド情報を用いた-括学習型の自己組織化マップ法による機能未知のタンパク質類の機能推定法の開発2008
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第2回日本微生物学会年会
- Place of Presentation
  大阪(口頭)
- Data Source
  KAKENHI-PROJECT-20700273
[Presentation] 持続可能型社会への貢献遺伝子データベースの構築2007
- Author(s)
  棚橋佳世, 上原啓史, 阿部貴志, 池村淑道
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-11
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法の開発2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回情報化学討論会,
- Place of Presentation
  京都
- Year and Date
  2007-11-15
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 超大型スーパーコンピュータで可能になるゲノム情報に基づく生物の府瞰的把握と環境ゲノム資源活用のための情報学的手法確立2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  次世代スーパーコンピューティング・シンポジウム2007
- Place of Presentation
  東京
- Year and Date
  2007-10-03
- Data Source
  KAKENHI-PROJECT-18710176
[Presentation] 自己組織化マップ(SOM)によるゲノムとタンパク質配列からの効率的な知識発見2007
- Author(s)
  阿部貴志
- Organizer
  化学と生物学を統合する情報学に関するシンポジウム
- Place of Presentation
  東京
- Year and Date
  2007-12-07
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 学部教育としての持続可能型社会への貢献遺伝子データベース構築2007
- Author(s)
  上原啓史, 阿部貴志, 棚橋佳世, 中原拓, 大島一彦, 池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Development of a new informatics method based on SOM for estimating functions of function-unknown proteins being increasingly accumulated in databases.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  The 79th Annual Meeting of the Genetics Society of Japan
- Place of Presentation
  Okayama
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Batch-Learning Self-Organizing Map for estimating functions of function-unknown proteins being increasingly accumulated in databases.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  The 30th Annual Meeting for the Molecular Society of Japan
- Place of Presentation
  Yokohama
- Year and Date
  2007-12-14
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型の自己組織化マップ法2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回日本分子生物学会年会2007年12月14日
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] ヒト皮膚色関連遺伝子多型の探索およびRS/GISを用いた遺伝子多型の空間的拡散に関する考察2007
- Author(s)
  安納住子, 阿部貴志, 山本卓志
- Organizer
  日本生理人類学会第56回大会
- Place of Presentation
  秋田県秋田市
- Data Source
  KAKENHI-PROJECT-18657083
[Presentation] 学部教育としての持続可能型社会への貢献遺伝子データベース構築2007
- Author(s)
  上原啓史, 阿部貴志, 棚橋佳世, 中原拓, 大島一彦, 池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] 超大型スーパーコンピュータで可能になるゲノム情報に基づく生物の俯瞰的把握と環境ゲノム資源活用のための情報学的手法確立2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  次世代スーパーコンピューティング・シンポジウム2007
- Place of Presentation
  東京
- Year and Date
  2007-10-03
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップの開発2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Establishment of the Database for Genes Contributing to Sustainable World as an activity of undergraduate education.2007
- Author(s)
  Uehara, H., Abe, T., Tanahashi, K., Nakahara, T., Ohshima, K., Ikemura, T.
- Organizer
  The Genetics Society of Japan 79th Annual Meeting
- Place of Presentation
  Okayama
- Year and Date
  2007-09-03
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Characterization of Genetic Signal Sequences with Batch-Learning SOM.2007
- Author(s)
  Abe, T., Ikeda, S., Kanaya, S., Wada, K., Ikemura, T.
- Organizer
  Workshop 2007 on Self-Organizing Maps
- Place of Presentation
  Bielefeld/Germany
- Year and Date
  2007-09-05
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] 持続可能型社会への貢献遺伝子データベースの構築2007
- Author(s)
  棚橋佳世, 上原啓史, 阿部貴志, 池村淑道
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-11
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Establishment of an informatics method that enables a comprehensive understanding of genome signatures and utilizing the signatures for phylogenetic classification of a massive amount of environmental sequences obtained by metagenome analyses by utilizing high performance supercomputers.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  Next generation super computing symposium 2007
- Place of Presentation
  Tokyo
- Year and Date
  2007-10-03
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップの開発2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Data Source
  KAKENHI-PROJECT-18710176
[Presentation] 自己組織化マップ(SOM)によるゲノムとタンパク質配列からの効率的な知識発見2007
- Author(s)
  阿部貴志
- Organizer
  化学と生物学を統合する情報学に関するシンポジウム
- Place of Presentation
  東京
- Year and Date
  2007-12-07
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Ribosomal RNA-based analysis of microbiota from an Antarctic mosspillar2007
- Author(s)
  Ryosuke Nakai, Takeshi Naganuma, Hiroshi Kagoshima, Hironori Niki, Yuji Kohara, Satoshi Imura, Satoshi Kanda, Katsuhiko Yanagihara, Tomoya Baba, Takashi Abe, Takanori Narita
- Organizer
  XXXth Symposium on Polar Biology
- Place of Presentation
  Tokyo
- Year and Date
  2007-11-15
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型の自己組織化マップ法2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回日本分子生物学会年会2007年12月14日
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] A novel bioinformatics strategy for unveiling microbial diversity of uncultured microbe mixtures on the basis of Batch-Learning Self-Organizing Map (BLSOM)2007
- Author(s)
  Takashi Abe, Shigehiko Kanaya and Toshimichi Ikemura
- Organizer
  The 7th International Workshop on Advanced Genomics
- Place of Presentation
  Tokyo
- Year and Date
  2007-11-27
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法の開発2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回情報化学討論会
- Place of Presentation
  京都
- Year and Date
  2007-11-15
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型の自己組織化マップ法2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Characterization of Genetic Signal Sequences with Batch-Learning SOM2007
- Author(s)
  Takashi Abe, Shun Ikeda, Shigehiko Kanaya, Kennosuke Wada, and Toshimichi Ikemura
- Organizer
  Workshop 2007 on Self-Organizing Maps
- Place of Presentation
  Bielefeld/Germany
- Year and Date
  2007-09-05
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための一括学習型の自己組織化マップ法2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-18710176
[Presentation] 超大型スーパーコンピュータで可能になるゲノム情報に基づく生物の俯瞰的把握と環境ゲノム資源活用のための情報学的手法確立2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  次世代スーパーコンピューティング・シンポジウム2007
- Place of Presentation
  東京
- Year and Date
  2007-10-03
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Characterization of Genetic Signal Sequences with Batch-Learning SOM2007
- Author(s)
  T., Abe, S., Ikeda, S., Kanaya, K., Wada and T., Ikemura
- Organizer
  Workshop 2007 on Self-Organizing Maps
- Place of Presentation
  Bielefeld/Germany
- Year and Date
  2007-09-05
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Effective knowledge discovery from genome, gene and protein sequences by using Self-Organizing Map(SOM).2007
- Author(s)
  Abe, T.
- Organizer
  The Symposium on Information Science to Integrate Chemistry with Biology
- Place of Presentation
  Tokyo
- Year and Date
  2007-12-07
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップの開発2007
- Author(s)
  阿部貴志、金谷重彦、池村淑道
- Organizer
  日本遺伝学会第79回大会
- Place of Presentation
  岡山
- Year and Date
  2007-09-03
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] 多遺伝子座におけるSNP対立遺伝子の相互作用が及ぼすヒト皮膚色に関する人種羊について2007
- Author(s)
  安納住子, 阿部貴志, 山本卓志
- Organizer
  日本生理人類学会第57回大会
- Place of Presentation
  福岡県福岡市
- Data Source
  KAKENHI-PROJECT-18657083
[Presentation] Development of a new informatics method based on SOM for estimating functions of function-unknown proteins being increasingly accumulated in databases.2007
- Author(s)
  Abe, T., Kanaya, S., Ikemura, T.
- Organizer
  The 30th Symposium on Chemical Information and Computer Sciences
- Place of Presentation
  Kyoto
- Year and Date
  2007-11-15
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] Database for Genes Contributing to Sustainable World.2007
- Author(s)
  Tanahashi, K., Uehara, H., Abe, T., Ikemura, T.
- Organizer
  The 30th Annual Meeting for the Molecular Society of Japan
- Place of Presentation
  Yokohama
- Year and Date
  2007-12-11
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18570216
[Presentation] データベースに蓄積の著しい機能未知のタンパク質類の機能推定のための自己組織化マップ法の開発2007
- Author(s)
  阿部貴志, 金谷重彦, 池村淑道
- Organizer
  第30回情報化学討論会,
- Place of Presentation
  京都
- Year and Date
  2007-11-15
- Data Source
  KAKENHI-PROJECT-18018015
[Presentation] Tick virome analysis using a high-throughput sequencing technology.
- Author(s)
  Yongjin Qiu, Ryo Nakao, Takashi Abe, and Chihiro Sugimoto
- Organizer
  TTP8
- Place of Presentation
  Cape Town, South Africa
- Year and Date
  2014-08-24 – 2014-08-29
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] メタゲノム解析を活用した新規微生物群の効率的な探索.
- Author(s)
  阿部貴志
- Organizer
  第157回日本獣医学会学術集会
- Place of Presentation
  札幌
- Year and Date
  2014-09-09 – 2014-09-12
- Invited
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] Metagenomic approaches to identify potential pathogens in ticks.
- Author(s)
  Ryo Nakao, Yongjin Qiu, Takashi Abe, Toshimichi Ikemura and Chihiro Sugimoto.
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜
- Year and Date
  2014-09-17 – 2014-09-19
- Invited
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] 人獣共通感染ウイルスゲノム配列の宿主依存性に関わる特徴抽出法の開発とそれを用いたウイルスゲノム配列の変化方向予測
- Author(s)
  岩崎裕貴、秋葉太貴、小倉歩、阿部貴志、和田健之介、伊藤正恵、池村淑道
- Organizer
  第1回人獣共通感染症研究拠点シンポジウム
- Place of Presentation
  岐阜大学
- Data Source
  KAKENHI-PROJECT-23500371
[Presentation] 南極の湖沼生物圏における遺伝子の水平伝播ワールド
- Author(s)
  2.馬場知哉、阿部貴志、豊田敦、中井亮佑、長沼毅、藤山秋佐夫、伊村智、神田啓史、本山秀明、仁木宏典
- Organizer
  第9回日本ゲノム微生物学会年会
- Place of Presentation
  神戸大学（兵庫県、神戸市）
- Year and Date
  2015-03-06 – 2015-03-08
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Development of Self-Compress BLSOM for comprehending big sequence data.
- Author(s)
  Akihito Kikuchi, Shigehiko Kanaya, Toshimichi Ikemura and Takashi Abe
- Organizer
  GIW2014
- Place of Presentation
  Tokyo, Japan
- Year and Date
  2014-12-15 – 2014-12-17
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] メタゲノム解析による活性汚泥中に生息する有用な微生物の探索.
- Author(s)
  阿部貴志, 中田俊芳, 熊谷鷹佑, 佐藤修正, 平川英樹, 近藤昭宏, 杉本千尋, 池村淑道, 松井和彦.
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜
- Year and Date
  2014-09-17 – 2014-09-19
- Data Source
  KAKENHI-PROJECT-26330327
[Presentation] Bacterial Genome-wide Horizontal Gene-transfers Provide Co-evolution and Adaptation Strategies of Biosphere in Ultra-oligotrophic Antarctic Lake
- Author(s)
  1.Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  2014 SCAR Open Science Conference
- Place of Presentation
  Auckland, New Zealand
- Year and Date
  2014-08-25 – 2014-08-28
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Biosphere of an Antarctic Lake as a Natural Laboratory of Biological Evolutions
- Author(s)
  1.Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  第5回極域科学シンポジウム
- Place of Presentation
  国立極地研究所（東京都、立川市）
- Year and Date
  2014-12-02 – 2014-12-05
- Data Source
  KAKENHI-PROJECT-24310150

1. IKEMURA Toshimichi (50025475)

# of Collaborated Projects: 8 results

# of Collaborated Products: 182 results
2. HORATA Shinichi (70377125)

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17. TAKADA Toyoyuki (20356257)

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18. Nakao Ryo (50633955)

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28. 上野嘉之 (60416724)

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31. 寺尾豊 (50397717)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
32. 東元祐一郎 (40352124)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
33. 五十嵐学 (10374240)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
34. 広川貴次 (20357867)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
35. 松野啓太 (40753306)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
36. 齋藤玲子 (30345524)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
37. 菖蒲川由郷 (30621198)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
38. Kouzuma Atsushi

# of Collaborated Projects: 1 results

# of Collaborated Products: 24 results
39. 山本卓志

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
40. YOSHIZAWA Hirohisa

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
41. WATANABE Satoshi

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
42. HORINAKA Mano

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
43. WATANABE Kenta

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
44. SUZUKI Haruo

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
45. TAKEUCHI Shinji

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
46. YAMADA Tadaaki

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
47. ORBA Yasuko

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# of Collaborated Products: 1 results
48. AOKI Motohide

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
49. 鹿児島浩

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
50. 酒井敏行

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
51. 武藤あきら

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
52. 岡田典弘

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
53. 伊藤公人

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
54. 邱永晋

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
55. 藤島政博

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
56. 打矢恵一

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
57. 坂上拓郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
58. 矢野聖二

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
59. 高山浩一

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
60. 梶原将大

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
61. 澤洋文

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
62. 佐々木道仁

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
63. 石井俊一

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
64. 梅村知也

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
65. 土田正則

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
66. 小池輝元

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
67. 佐藤征二郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Abe Takashi 阿部 貴志

ABE Takashi 阿部 貴志

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汎フィロウイルス治療薬開発に向けたドライ-ウェット融合型研究基盤の構築Ongoing

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Elucidation of the mechanism for auto-penetrating DNA aptamers and their application as post-antibody drugsOngoing

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The integrated multi-omics analysis of nontuberculous mycobacteria using neural network algorithms to construct a predictive model of the pathological featuresOngoing

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Why epidemic period of respiraotry syncytial virus has shift to summer time?Ongoing

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水平伝播遺伝子予測システムの開発と環境適応と共進化過程の解明Principal InvestigatorOngoing

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Development of a novel bioinformatics method to analyze big genome sequence data for efficient knowledge discoveryPrincipal Investigator

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A bioinformatics strategy for revealing microbial community structures and metabolic pathways by reconstructing multiple genomes from metagenomic sequences.Principal Investigator

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Abe Takashi 阿部貴志

ABE Takashi 阿部貴志