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OBAYASHI Takeshi  大林 武

Researcher Number 50397048
Other IDs
  • ORCIDhttps://orcid.org/0000-0002-3106-722X
Affiliation (Current) 2022: 東北大学, 情報科学研究科, 准教授
Affiliation (based on the past Project Information) *help 2012 – 2020: 東北大学, 情報科学研究科, 准教授
2009 – 2010: Tohoku University, 大学院・情報科学研究科, 助教
Review Section/Research Field
Principal Investigator
Basic Section 43060:System genome science-related / Plant molecular biology/Plant physiology / System genome science
Except Principal Investigator
Biological Sciences / Developmental biology / Plant molecular biology/Plant physiology
Keywords
Principal Investigator
遺伝子共発現 / データベース / バイオインフォマティクス / シロイヌナズナ / 環境応答 / マイクロアレイ / ネットワーク生物学 / 共発現データベース / ゲノム進化 / シングルセル … More / トランスクリプトーム / 遺伝子ネットワーク / 生命情報科学 / 比較ゲノム … More
Except Principal Investigator
植物 / 細胞壁 / 植物細胞壁 / 情報処理 / 共発現データベース / セルロース / キシログルカン / XTH / CET / 細胞壁モデル / 酵素 / 共同研究 / 研究支援 / 若手育成 / 総括班 / アウトリーチ / 発生制御 / シグナル分子 / 生物間相互作用 / 糖質分析 / オミクス / イメージング / 支援センター / データベース / 公開展示 / 膜交通 / 細胞骨格 / 植物免疫 / 高次構造 / セルロース繋ぎ換え反応 / 細胞壁再生系 / ネナシカズラ / トランスクリプトーム / beta1,3/1,4グルカン / クチクラ / 倍数体 / PME / ペクチンメチルエステラーゼ / 共発現 / 神経幹細胞 / 細胞分化 / 翻訳後タンパク質修飾 / タンパク質切断制御 / タンパク質相互作用 / 幹細胞 / ニューロン分化 / 大脳皮質発生 / タンパク質発現制御 / プロトプラスト / 細胞壁再生 / 酵素反応 / セルロース繋ぎ換え酵素 Less
  • Research Projects

    (8 results)
  • Research Products

    (69 results)
  • Co-Researchers

    (44 People)
  •  人間活動に伴う植物の短期的適応進化の学際統合的理解Principal Investigator

    • Principal Investigator
      大林 武
    • Project Period (FY)
      2020
    • Research Category
      Fund for the Promotion of Joint International Research (Fostering Joint International Research (A))
    • Review Section
      Basic Section 43060:System genome science-related
    • Research Institution
      Tohoku University
  •  リファレンストランスクリプトーム構築に基づく遺伝子共発現ネットワーク解析の高度化Principal Investigator

    • Principal Investigator
      大林 武
    • Project Period (FY)
      2019 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43060:System genome science-related
    • Research Institution
      Tohoku University
  •  A new molecular model for plant cell wall based on a new enzyme, cellulose endotransglucosylase

    • Principal Investigator
      Nishitani Kazuhiko
    • Project Period (FY)
      2017 – 2019
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Plant molecular biology/Plant physiology
    • Research Institution
      Kanagawa University
      Tohoku University
  •  Analysis of cell-cell communication using comparison of gene co-expression for different tissuesPrincipal Investigator

    • Principal Investigator
      Obayashi Takeshi
    • Project Period (FY)
      2015 – 2017
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      System genome science
    • Research Institution
      Tohoku University
  •  Novel molecular mechanism collaborating stem neural stem cell mainteinance and differentiation

    • Principal Investigator
      Katsuyama Yu
    • Project Period (FY)
      2014 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Developmental biology
    • Research Institution
      Shiga University of Medical Science
      Tohoku University
  •  The plant cell wall as information processing system

    • Principal Investigator
      Nishitani Kazuhiko
    • Project Period (FY)
      2012 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      Tohoku University
  •  Structure and dynamics of the plant cell wall as information processing system

    • Principal Investigator
      Nishitani Kazuhiko
    • Project Period (FY)
      2012 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      Tohoku University
  •  Construction of ATTED-III, Gene Coexpression Database for ArabidopsisPrincipal Investigator

    • Principal Investigator
      OBAYASHI Takeshi
    • Project Period (FY)
      2009 – 2010
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Plant molecular biology/Plant physiology
    • Research Institution
      Tohoku University

All 2021 2020 2019 2018 2017 2016 2015 2014 2013 2012 2011 2010 2009 Other

All Journal Article Presentation

  • [Journal Article] ATTED-II in 2018: A Plant Coexpression Database based on Investigation of Statistical Property of the Mutual Rank Index2018

    • Author(s)
      Obayashi T, Aoki Y, Tadaka S, Kagaya Y, Kinoshita K.
    • Journal Title

      Plant Cell Physiology

      Volume: 59

    • DOI

      10.1093/pcp/pcx191

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15K18464, KAKENHI-PROJECT-15K20863
  • [Journal Article] Arabinogalactan Proteins Accumulate in the Cell Walls of Searching Hyphae of the Stem Parasitic Plants,Cuscuta campestris and Cuscuta japonica.2017

    • Author(s)
      Hozumi A, Bera S, Fujiwara D, Obayashi T, Yokoyama R, Nishitani K, Aoki K
    • Journal Title

      Plant Cell Physiol.

      Volume: 58 Pages: 1868-1877

    • DOI

      10.1093/pcp/pcx121

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16K07389, KAKENHI-PROJECT-17K19374, KAKENHI-WRAPUP-17H06066, KAKENHI-PROJECT-17H03691
  • [Journal Article] Modification of plant cell wall structure accompanied by enhancement of saccharification efficiency using a chemical, lasalocid sodium.2016

    • Author(s)
      Okubo-Kurihara, E., Ohtani, M., Kurihara, Y., Kakegawa, K., Kobayashi, M., Nagata, N., Komatsu, T., Kikuchi, J., Cutler, S., Demura,T.and Matsui, M.
    • Journal Title

      Scientific Reports

      Volume: 6 Pages: 34602-34602

    • DOI

      10.1038/srep34602

    • NAID

      120005867185

    • Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-25113006, KAKENHI-PUBLICLY-15H01235, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114002, KAKENHI-PROJECT-26440170
  • [Journal Article] Plant Aurora kinases interact with and phosphorylate transcription2016

    • Author(s)
      Takagi, M., Sakamoto, T.,Suzuki, R.,Nemoto, K., Obayashi, T., Matsunaga, T. M., Hirakawa, T., Kurihara, D., Nariai, Y., Urano, T., Sawasaki, T., Matsunaga, S.
    • Journal Title

      J Plant Res

      Volume: 129 Pages: 1165-1178

    • DOI

      10.1007/s10265-016-0860-x

    • NAID

      40020988231

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PLANNED-15H05962, KAKENHI-PLANNED-16H06579, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005, KAKENHI-PROJECT-16H04729, KAKENHI-PROJECT-16J06389, KAKENHI-PROJECT-26291067, KAKENHI-PROJECT-16K18570
  • [Journal Article] ALCOdb: Gene Coexpression Database for Microalgae2016

    • Author(s)
      Aoki Y, Okamura Y, Ohta H, Kinoshita K, Obayashi T.
    • Journal Title

      Plant Cell Physiol.

      Volume: 57

    • DOI

      10.1093/pcp/pcv190

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-15K18464, KAKENHI-PROJECT-15K20863, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005
  • [Journal Article] ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression2016

    • Author(s)
      Aoki Y, Okamura Y, Tadaka S, Kinoshita K, Obayashi T.
    • Journal Title

      Plant Cell Physiol.

      Volume: 57

    • DOI

      10.1093/pcp/pcv165

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-15K18464, KAKENHI-PROJECT-15K20863, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005
  • [Journal Article] Plant and Cell Physiology's 2015 Database Issue.2015

    • Author(s)
      Ohyanagi H, Obayashi T, Yano K.
    • Journal Title

      Plant Cell Physiol.

      Volume: 56 Pages: 4-6

    • DOI

      10.1093/pcp/pcu206

    • Peer Reviewed
    • Data Source
      KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005
  • [Journal Article] Transcriptional repression by MYB3R proteins regulates plant organ growth2015

    • Author(s)
      Kobayashi K, Suzuki T, Iwata E, Nakamichi N, Suzuki T, Chen P, Ohtani M, Ishida T, Hosoya H, Müller S, Leviczky T, Pettkó-Szandtner A, Darula Z, Iwamoto A, Nomoto M, Tada Y, Higashiyama T, Demura T, Doonan JH, Hauser MT, Sugimoto K, Umeda M, Magyar Z, Bögre L, Ito M
    • Journal Title

      EMBO J

      Volume: 34 Pages: 1992-2007

    • DOI

      10.15252/embj.201490899

    • Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25440134, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114002, KAKENHI-PUBLICLY-26113509, KAKENHI-PROJECT-13J10800, KAKENHI-PROJECT-26650099, KAKENHI-PROJECT-26660290, KAKENHI-PROJECT-25291062, KAKENHI-PROJECT-26291061, KAKENHI-PROJECT-26291064, KAKENHI-ORGANIZER-25113001, KAKENHI-PROJECT-26291058
  • [Journal Article] A plant U-box protein, PUB4, regulates asymmetric cell division and cell proliferation in the root meristem2015

    • Author(s)
      Kinoshita, A, Hove, C.A., Tabata, R., Yamada, M., Shimizu, N., Ishida, T., Yamaguchi K., Shigenobu, S., Takebayashi, Y., Iuchi, S., Kobayashi, M., Kurata, T., Wada, T., Seo, M., Hasebe, M., Bilou, I., Fukuda, H., Scheres, B., Heidstra, R., Sawa, S.
    • Journal Title

      Development

      Volume: 142 Pages: 1660-1670

    • DOI

      10.1242/dev.113167

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-ORGANIZER-24114001, KAKENHI-PROJECT-24570051, KAKENHI-PROJECT-24770077, KAKENHI-PUBLICLY-25119713, KAKENHI-PROJECT-25440134, KAKENHI-PROJECT-26650143, KAKENHI-PROJECT-26650102, KAKENHI-PLANNED-22128008, KAKENHI-PLANNED-15H05958, KAKENHI-PLANNED-24114009, KAKENHI-PROJECT-24370024, KAKENHI-PROJECT-23227001
  • [Journal Article] Comparison of gene coexpression profiles and construction of conserved gene networks to find functional modules.2015

    • Author(s)
      Okamura Y, Obayashi T, Kinoshita K.
    • Journal Title

      PLoS One

      Volume: 10

    • DOI

      10.1371/journal.pone.0132039

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15K18464, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005
  • [Journal Article] COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems.2015

    • Author(s)
      Okamura Y, Aoki Y, Obayashi T, Tadaka S, Ito S1, Narise T, Kinoshita K.
    • Journal Title

      Nucleic Acids Res.

      Volume: 43

    • DOI

      10.1093/nar/gku1163

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PLANNED-22136005, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005, KAKENHI-PROJECT-24570176
  • [Journal Article] ATTED-II in 2014: Evaluation of Gene Coexpression in Agriculturally Important Plants.2014

    • Author(s)
      Takeshi Obayashi, Yasunobu Okamura, Satoshi Ito, Shu Tadaka, Yuichi Aoki, Matsuyuki Shirota and Kengo Kinoshita
    • Journal Title

      Plant Cell Physiol.

      Volume: 55

    • DOI

      10.1093/pcp/pct178

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-22136005, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005, KAKENHI-PROJECT-24570176
  • [Journal Article] COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals.2013

    • Author(s)
      Obayashi T, Okamura Y, Ito S, Tadaka S, Motoike IN, Kinoshita K
    • Journal Title

      Nucleic Acids Res.

      Volume: 41(Database Issue) Pages: 1014-1020

    • DOI

      10.1093/nar/gks1014

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-24570176, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005
  • [Journal Article] bHLH transcription factors JA-ASSOCIATED MYC2-LIKE 1, JAM2 and JAM3 are negative regulators of jasmonate responses in Arabidopsis.2013

    • Author(s)
      Sasaki-Sekimoto, Y., Jikumaru, Y., Obayashi, T., Saito, H., Masuda, S., Kamiya, Y., Ohta, H. and Shirasu, K.
    • Journal Title

      Plant Physiol.

      Volume: 163 Pages: 291-304

    • DOI

      10.1104/pp.113.220129

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23770038, KAKENHI-ORGANIZER-24114001, KAKENHI-PLANNED-24114005, KAKENHI-PROJECT-24228008, KAKENHI-PUBLICLY-25120709
  • [Journal Article] Role of the G-box element in regulation of chlorophyll biosynthesis in Arabidopsis roots2012

    • Author(s)
      Kobayashi, K., Obayashi, T., Masuda, T.
    • Journal Title

      Plant Signaling and Behavior

      Volume: 7 Pages: 922-926

    • DOI

      10.4161/psb.20760

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-24570042, KAKENHI-PROJECT-24770055, KAKENHI-PLANNED-24114005
  • [Journal Article] Regulation of root greening by light and auxin/cytokinin signaling in Arabidopsis.2012

    • Author(s)
      Kobayashi K
    • Journal Title

      Plant Cell

      Volume: 24 Pages: 1081-1095

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-24114005
  • [Journal Article] Regulation of root greening by light and auxin/cytokinin signaling in Arabidopsis.2012

    • Author(s)
      Kobayashi, K.
    • Journal Title

      Plant Cell

      Volume: 24 Pages: 1081-1095

    • Peer Reviewed
    • Data Source
      KAKENHI-ORGANIZER-24114001
  • [Journal Article] COXPRESdb : a database to compare gene coexpression in seven model animals.2011

    • Author(s)
      Obayashi T, Kinoshita K
    • Journal Title

      Nucleic Acids Res 39

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] ATTED-II updates : condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants.2011

    • Author(s)
      Obayashi, et al.
    • Journal Title

      Plant and Cell Physiology

      Volume: 52 Pages: 213-219

    • NAID

      10029708387

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] Kinoshita K ATTED-II updates : condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants.2011

    • Author(s)
      Obayashi T, Nishida K, Kasahara K
    • Journal Title

      Plant Cell Physiol 52

      Pages: 213-219

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] 共発現情報から見る遺伝子機能ネットワーク2011

    • Author(s)
      大林武、木下賢吾
    • Journal Title

      化学と生物[KASEAA] 49

      Pages: 48-56

    • NAID

      10027729287

    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] COXPRESdb : a database to compare gene coexpression in seven model animals2011

    • Author(s)
      Obayashi, Kinoshita
    • Journal Title

      Nucleic Acids Research

      Volume: 39 Pages: 1016-1022

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] 共発現情報から見る遺伝子機能ネットワーク2011

    • Author(s)
      大林武、木下賢吾
    • Journal Title

      化学と生物

      Volume: 49 Pages: 48-66

    • NAID

      10027729287

    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] Coexpression landscape in ATTED-II : usage of gene list and gene network for various types of pathways.2010

    • Author(s)
      Obayashi T, Kinoshita K
    • Journal Title

      J. Plant Research 123

      Pages: 311-319

    • NAID

      10027218882

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis.2009

    • Author(s)
      Kinoshita K, Obayashi T
    • Journal Title

      Bioinformatics 25

      Pages: 2677-2684

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression.2009

    • Author(s)
      Obayashi T, Kinoshita K
    • Journal Title

      DNA Research 16

      Pages: 249-260

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis2009

    • Author(s)
      Kinoshita, Obayashi
    • Journal Title

      Bioinformatics 25

      Pages: 2677-2684

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression2009

    • Author(s)
      Obayashi, Kinoshita
    • Journal Title

      DNA Research 16

      Pages: 249-260

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Journal Article] Coexpression landscape in ATTED-II : usage of gene list and gene network for various types of pathways

    • Author(s)
      Obayashi, Kinoshita
    • Journal Title

      Journal of Plant Research (未定, 印刷中)

    • NAID

      10027218882

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] ATTED-II v10.2: a Plant Coexpression Database Providing Logit Score of Ensemble Mutual Rank as Coexpression Index to Enhance Usability for Genome-Wide Analyses.2021

    • Author(s)
      Takeshi Obayashi and Yuichi Aoki
    • Organizer
      第62回日本植物生理学会年会
    • Data Source
      KAKENHI-PROJECT-19K06624
  • [Presentation] Exploration of Gene Expression Latent Space in Higher Plants by using Generative Models.2021

    • Author(s)
      Yuichi Aoki, Takeshi Obayashi
    • Organizer
      第62回日本植物生理学会年会
    • Data Source
      KAKENHI-PROJECT-19K06624
  • [Presentation] Development of Coexpression-guided Generative Model for Plant Gene Expression Inference2020

    • Author(s)
      Yuichi Aoki, Shinichi Yamazaki, and Takeshi Obayashi
    • Organizer
      28th Conference on International Society for Computational Biology (ISMB2020)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K06624
  • [Presentation] ATTED-II v10: a Plant Coexpression Database Providing Logit Score of Ensemble Mutual Rank as Coexpression Index to Enhance Usability for Genome-Wide Analyses.2020

    • Author(s)
      Takeshi Obayashi, Yuichi Aoki
    • Organizer
      日本植物生理学会年会(大阪大会)
    • Data Source
      KAKENHI-PROJECT-19K06624
  • [Presentation] Comparison of summarization methods of co-expressed gene list to predict gene function2020

    • Author(s)
      Takeshi Obayashi, Yuichi Aoki, and Kengo Kinoshita
    • Organizer
      28th Conference on International Society for Computational Biology (ISMB2020)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K06624
  • [Presentation] 全ゲノム遺伝子共発現情報の可視化手法の検討2020

    • Author(s)
      Takeshi Obayashi, Yuichi Aoki, and Kengo Kinoshita
    • Organizer
      第9回生命医薬情報学連合大会
    • Data Source
      KAKENHI-PROJECT-19K06624
  • [Presentation] Integration and evaluation of scRNAseq-, bulk RNAseq and microarray-based gene coexpression data2019

    • Author(s)
      Takeshi Obayashi, Yuichi Aoki, Kengo Kinoshita
    • Organizer
      ISMB/ECCB 2019
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K06624
  • [Presentation] 植物種間情報伝達を介したアメリカネナシカズラ吸器における維管束新生機構の探索2018

    • Author(s)
      加賀悠樹,大林武,横山隆亮,黒羽剛,大谷美沙都,出村拓,西谷和彦
    • Organizer
      日本植物学会第82回大会
    • Data Source
      KAKENHI-PROJECT-17H03691
  • [Presentation] アメリカネナシカズラのゲノム解読による寄生植物の適応進化メカニズムの解明2018

    • Author(s)
      横山隆亮,大林武,鳴川秀樹,加賀悠樹,加藤萌木,黒羽剛,西谷和彦
    • Organizer
      第59回日本植物生理学会年会
    • Data Source
      KAKENHI-PROJECT-17H03691
  • [Presentation] Insight into strategies for plant-plant parasitism in Cuscuta campestris based on genome sequencing.2018

    • Author(s)
      Narukawa, H., Yokoyama, R., Obayashi, T., Kaga, Y., Kato, M., Kuroha, T., Nishitani, K.
    • Organizer
      第59回日本植物生理学会年会
    • Data Source
      KAKENHI-PROJECT-17H03691
  • [Presentation] 寄生植物 アメリカネナシカズラの花成制御におけるFTの機能2018

    • Author(s)
      加藤萌木,横山隆亮,黒羽剛,大林武,阿部光知,西谷和彦
    • Organizer
      日本植物学会第82回大会
    • Data Source
      KAKENHI-PROJECT-17H03691
  • [Presentation] A revised coexpression calculation procedure in ATTED-II version 9 with batch-normalization and bagging methods.2018

    • Author(s)
      Takeshi Obayashi, Yuichi Aoki and Kengo Kinoshita
    • Organizer
      the 59th Annual Meeting of the Japanese Society of Plant Physiologists
    • Data Source
      KAKENHI-PROJECT-15K18464
  • [Presentation] 比較ゲノム解析から見えてきた茎寄生植物ネナシカズラの形態形成メカニズム2017

    • Author(s)
      横山隆亮,大林武,鳴川秀樹,加賀悠樹,加藤萌木,黒羽剛,西谷和彦
    • Organizer
      日本植物学会第81回大会
    • Data Source
      KAKENHI-PROJECT-17H03691
  • [Presentation] 茎寄生植物アメリカネナシカズラにおける核内倍加を介した吸器形成制御メカニズムの解析2017

    • Author(s)
      鳴川秀樹,加賀悠樹,柴田航希,倉田哲也,大林武,黒羽剛,横山隆亮,西谷和彦
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学(鹿児島県鹿児島市)
    • Year and Date
      2017-03-16
    • Data Source
      KAKENHI-PLANNED-24114005
  • [Presentation] Sample Alignment of Different Species toward Species-Specific Coexpression Analyses2017

    • Author(s)
      Takeshi Obayashi, Yuichi Aoki, Shu Tadaka, Yasunobu Okamura, Kengo Kinoshita
    • Organizer
      the 58th Annual Meeting of the Japanese Society of Plant Physiologists
    • Data Source
      KAKENHI-PROJECT-15K18464
  • [Presentation] ネナシカズラのゲノムから読み解く茎寄生の生命戦略2017

    • Author(s)
      西谷和彦,横山隆亮,大林武 他
    • Organizer
      日本植物学会第81回大会
    • Data Source
      KAKENHI-PROJECT-17H03691
  • [Presentation] 茎寄生植物アメリカネナシカズラにおける核内倍加を介した吸器形成制御メカニズムの解析2017

    • Author(s)
      鳴川秀樹,加賀悠樹,柴田航希,倉田哲也,大林武,黒羽剛,横山隆亮,西谷和彦
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学(鹿児島県鹿児島市)
    • Year and Date
      2017-03-16
    • Data Source
      KAKENHI-ORGANIZER-24114001
  • [Presentation] A Model for the Molecular Mechanism of Vascular Development in the Haustorium of the Parasitic Plant Cuscuta Campestris.2017

    • Author(s)
      Kaga Y., Obayashi T., Yokoyama R., Nishitani K.
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H03691
  • [Presentation] Gene age determines the fundamental structure of the gene coexpression network.2016

    • Author(s)
      Yuichi Aoki, Takeshi Obayashi, Kengo Kinoshita
    • Organizer
      Intelligent Systems for Molecular Biology 2016
    • Place of Presentation
      Orlando, Florida, U.S.A
    • Year and Date
      2016-07-11
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K18464
  • [Presentation] 茎寄生植物アメリカネナシカズラCuscuta campestrisの吸器発生における維管束形成メカニズムの解析2016

    • Author(s)
      加賀悠樹,柴田航希,倉田哲也,大林武,横山隆亮,西谷和彦
    • Organizer
      東北植物学会第6回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2016-12-10
    • Data Source
      KAKENHI-PLANNED-24114005
  • [Presentation] 茎寄生植物アメリカネナシカズラの吸器形成における局所的な核内倍加の役割2016

    • Author(s)
      鳴川秀樹,加賀悠樹,柴田航希,倉田哲也,大林武,黒羽剛,横山隆亮,西谷和彦
    • Organizer
      東北植物学会第6回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2016-12-10
    • Data Source
      KAKENHI-PLANNED-24114005
  • [Presentation] 茎寄生植物アメリカネナシカズラの吸器形成における局所的な核内倍加の役割2016

    • Author(s)
      鳴川秀樹,加賀悠樹,柴田航希,倉田哲也,大林武,黒羽剛,横山隆亮,西谷和彦
    • Organizer
      東北植物学会第6回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2016-12-10
    • Data Source
      KAKENHI-ORGANIZER-24114001
  • [Presentation] 茎寄生植物アメリカネナシカズラ吸器形成における維管束分化メカニズムの解明2016

    • Author(s)
      加賀悠樹,柴田航希,倉田哲也,大林武,横山隆亮,西谷和彦
    • Organizer
      日本植物学会第80回大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Year and Date
      2016-09-16
    • Data Source
      KAKENHI-ORGANIZER-24114001
  • [Presentation] 茎寄生植物アメリカネナシカズラCuscuta campestrisの吸器発生における維管束形成メカニズムの解析2016

    • Author(s)
      加賀悠樹,柴田航希,倉田哲也,大林武,横山隆亮,西谷和彦
    • Organizer
      東北植物学会第6回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2016-12-10
    • Data Source
      KAKENHI-ORGANIZER-24114001
  • [Presentation] Meta-analysis of gene coexpression in ATTED-II toward species-specific coexpression analyses2016

    • Author(s)
      大林武,青木裕一,岡村容伸,田高周,木下賢吾
    • Organizer
      日本植物生理学会年会
    • Place of Presentation
      岩手大学(岩手)
    • Year and Date
      2016-03-17
    • Data Source
      KAKENHI-PROJECT-15K18464
  • [Presentation] 茎寄生植物アメリカネナシカズラ吸器発生過程における核内倍加の役割2016

    • Author(s)
      鳴川秀樹,加賀悠樹,柴田航希,倉田哲也,大林武,横山隆亮,西谷和彦
    • Organizer
      日本植物学会第80回大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Year and Date
      2016-09-16
    • Data Source
      KAKENHI-ORGANIZER-24114001
  • [Presentation] 茎寄生植物アメリカネナシカズラ吸器発生過程における核内倍加の役割2016

    • Author(s)
      鳴川秀樹,加賀悠樹,柴田航希,倉田哲也,大林武,横山隆亮,西谷和彦
    • Organizer
      日本植物学会第80回大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Year and Date
      2016-09-16
    • Data Source
      KAKENHI-PLANNED-24114005
  • [Presentation] Impact of Evolutionary Age on Gene Coexpression Network and Gene Functional Relationship2016

    • Author(s)
      Yuichi Aoki, Takeshi Obayashi, Kengo Kinoshita
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-12-01
    • Invited
    • Data Source
      KAKENHI-PROJECT-15K18464
  • [Presentation] 茎寄生植物アメリカネナシカズラ吸器形成における維管束分化メカニズムの解明2016

    • Author(s)
      加賀悠樹,柴田航希,倉田哲也,大林武,横山隆亮,西谷和彦
    • Organizer
      日本植物学会第80回大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Year and Date
      2016-09-16
    • Data Source
      KAKENHI-PLANNED-24114005
  • [Presentation] How to measure the similarity of gene expression patterns to identify gene function2011

    • Author(s)
      Obayashi T
    • Organizer
      QBIC2011 Bio-Informatics Workshop
    • Place of Presentation
      東京理科大学
    • Year and Date
      2011-03-11
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] How to measure the similarity of gene expression patterns to identify gene function2011

    • Author(s)
      Takeshi Obayashi
    • Organizer
      IC-QBIC2011 Bio-Informatics Workshop
    • Place of Presentation
      Tokyo University of Science
    • Year and Date
      2011-03-11
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] ATTED-II ver6:遺伝子共発現データの条件比較、種間比較2011

    • Author(s)
      大林武、木下賢吾
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      東北大学
    • Year and Date
      2011-03-22
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] Rank of Correlation Coefficient Is a Comparable Measure of Gene Coexpression2010

    • Author(s)
      Obayashi T, Kinoshita K
    • Organizer
      The 2010 Annual Conference of Japanese Society for Bioinformatics
    • Place of Presentation
      九州大学
    • Year and Date
      2010-12-13
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] Rank of Correlation Coefficient as a Comparable Measure for Biological Significance of Gene Coexpression2010

    • Author(s)
      Obayashi T, Kinoshita K
    • Organizer
      Asian Young Researchers Conference on Computational and Omics Biology 2010
    • Place of Presentation
      台南、台湾
    • Year and Date
      2010-03-10
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] Number of microarray samples to construct effective gene coexpression data2010

    • Author(s)
      Obayashi T, Kinoshita K
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本大学
    • Year and Date
      2010-03-20
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] Rank of Correlation Coefficient as a Comparable Measure for Biological Significance of Gene Coexpression2010

    • Author(s)
      Takeshi Obayashi
    • Organizer
      Asian Young Researchers Conference on Computational and Omics Biology 2010
    • Place of Presentation
      National Cheng Kung University, Taiwan
    • Year and Date
      2010-03-11
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] COXPRESdb : a gene coexpression database for 7 animal species2010

    • Author(s)
      Obayashi, Kinoshita
    • Organizer
      The Asian Young Researchers Conference on Computational and Omics Biology 2010
    • Place of Presentation
      Biopolis, Buona Vista, Singapore
    • Year and Date
      2010-12-01
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] COXPRESdb : a gene coexpression database for 7 animal species2010

    • Author(s)
      Obayashi T, Kinoshita K
    • Organizer
      4th Asian Young Researchers Conference on Computational and Omics Biology
    • Place of Presentation
      シンガポール、シンガポール共和国
    • Year and Date
      2010-12-01
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] Rank of Correlation Coefficient Is a Comparable Measure of Gene Coexpression2010

    • Author(s)
      Obayashi, Kinoshita
    • Organizer
      The 2010 Annual Conference of Japanese Society for Bioinformatics (JSBi2010)
    • Place of Presentation
      Centennial Hall Kyushu University School of Medicine
    • Data Source
      KAKENHI-PROJECT-21770035
  • [Presentation] COXPRESdb : A database of coexpressed gene networks for human, mouse and rat2009

    • Author(s)
      Obayashi T, Kinoshita K
    • Organizer
      International congress of physiological sciences
    • Place of Presentation
      京都
    • Year and Date
      2009-07-27
    • Data Source
      KAKENHI-PROJECT-21770035
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