Tasaki Sohei 田崎創平

Researcher Number	50713020
Other IDs	https://orcid.org/0000-0002-4259-0075
Affiliation (Current)	2026: 北海道大学, 理学研究院, 准教授 2026: 仙台高等専門学校, 総合工学科, 教育支援コーディネータ
Affiliation (based on the past Project Information) *help	2021 – 2024: 北海道大学, 理学研究院, 准教授 2019 – 2020: 京都大学, 高等研究院, 特定助教 2018: 国立研究開発法人理化学研究所, 生命機能科学研究センター, 研究員 2017: 東北大学, 学際科学フロンティア研究所, 助教
Review Section/Research Field	Principal Investigator Basic Section 12040:Applied mathematics and statistics-related Except Principal Investigator Complex systems
Keywords	Principal Investigator 細菌 / バイオフィルム / マルチレベルモデル / 遺伝子制御ネットワーク / 数理モデル / コロニーパターン / 細胞多様性 / 細胞社会 / ハイブリッドモデル / エージェントベースモデル … More / 個別要素法 / データ解析 / 自己組織化 / 細胞タイプ制御 / データ同化 / フェーズフィールドモデル / 細胞分化 / ライフサイクル / 枯草菌 … More Except Principal Investigator 再生医療 / 数理モデル / 臨床 / 数理科学 / 計算機科学 / 遺伝子 / 細胞・組織 / 癌 Less

Construction and analysis of a hybrid mathematical model describing the dynamics of bacterial cellular societyPrincipal Investigator
- Principal Investigator
  
  田崎創平
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 12040:Applied mathematics and statistics-related
- Research Institution
  Hokkaido University
Creation of multilevel model for predicting self-organization of bacterial populationPrincipal Investigator
- Principal Investigator
  
  Tasaki Sohei
- Project Period (FY)
  2019 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 12040:Applied mathematics and statistics-related
- Research Institution
  Hokkaido University
  Kyoto University
Integrated analysis and regulation of cellular diversity for disease treatment
- Principal Investigator
  
  FUJITA Naoya
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Japanese Foundation for Cancer Research

All 2025 2024 2023 2022 2021 2020 2019 2018

All Journal Article Presentation

[Journal Article] Turing patterns on polymerized membranes: coarse-grained lattice modelling with an internal degree of freedom for polymer direction2025
- Author(s)
  Kato Fumitake、Koibuchi Hiroshi、Bretin Elie、Carvalho Camille、Denis Roland、Masnou Simon、Nakayama Madoka、Tasaki Sohei、Uchimoto Tetsuya
- Journal Title
  
  Soft Matter
  
  Volume: 21 Issue: 12 Pages: 2317-2338
- DOI
  10.1039/d4sm01309c
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208, KAKENHI-PROJECT-23K03225
[Journal Article] Numerical study of anisotropic diffusion in Turing patterns based on Finsler geometry modeling2024
- Author(s)
  Diguet Gildas、Nakayama Madoka、Tasaki Sohei、Kato Fumitake、Koibuchi Hiroshi、Uchimoto Tetsuya
- Journal Title
  
  Physical Review E
  
  Volume: 109 Issue: 1 Pages: 014213-014213
- DOI
  10.1103/physreve.109.014213
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23K03208, KAKENHI-PROJECT-23K03225, KAKENHI-PROJECT-19K03645
[Journal Article] scEGOT: single-cell trajectory inference framework based on entropic Gaussian mixture optimal transport2024
- Author(s)
  Yachimura Toshiaki、Wang Hanbo、Imoto Yusuke、Yoshida Momoko、Tasaki Sohei、Kojima Yoji、Yabuta Yukihiro、Saitou Mitinori、Hiraoka Yasuaki
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 25 Issue: 1 Pages: 388-388
- DOI
  10.1186/s12859-024-05988-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K03208, KAKENHI-PROJECT-21K13822
[Journal Article] Nutrient-driven dedifferentiation of enteroendocrine cells promotes adaptive intestinal growth in Drosophila2023
- Author(s)
  Nagai Hiroki、Nagai Luis Augusto Eijy、Tasaki Sohei、Nakato Ryuichiro、Umetsu Daiki、Kuranaga Erina、Miura Masayuki、Nakajima Yuichiro
- Journal Title
  
  Developmental Cell
  
  Volume: 58 Issue: 18 Pages: 1764-1781.e10
- DOI
  10.1016/j.devcel.2023.08.022
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22KJ0757, KAKENHI-PROJECT-23K03208, KAKENHI-PROJECT-19K03645, KAKENHI-PLANNED-21H05105, KAKENHI-PROJECT-21H04774, KAKENHI-PROJECT-23K24025
[Journal Article] Multicellular model of angiogenesis2022
- Author(s)
  Nakazawa Takashi、Tasaki Sohei、Nakai Kiyohiko、Suzuki Takashi
- Journal Title
  
  AIMS Bioengineering
  
  Volume: 9 Issue: 1 Pages: 44-60
- DOI
  10.3934/bioeng.2022004
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-16H06576, KAKENHI-PLANNED-17H06327, KAKENHI-PROJECT-19K03645, KAKENHI-INTERNATIONAL-16K21739
[Journal Article] All global bifurcation diagrams of stationary solutions to a phase field model2022
- Author(s)
  Mori Tatsuki、Tasaki Sohei、Tsujikawa Tohru、Yotsutani Shoji
- Journal Title
  
  Discrete and Continuous Dynamical Systems - B
  
  Volume: - Issue: 12 Pages: 6306-6344
- DOI
  10.3934/dcdsb.2022183
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K03645, KAKENHI-PROJECT-22K13962, KAKENHI-PROJECT-22K03378, KAKENHI-PROJECT-19K03593
[Journal Article] Time Changes in the VEGF-A Concentration Gradient Lead Neovasculature to Engage in Stair-Like Growth2021
- Author(s)
  Ito Yukinobu、Minerva Dhisa、Tasaki Sohei、Yoshida Makoto、Suzuki Takashi、Goto Akiteru
- Journal Title
  
  Springer Proceedings in Mathematics & Statistics
  
  Volume: 370 Pages: 226-234
- DOI
  10.1007/978-981-16-4866-3_15
- ISBN
  9789811648656, 9789811648663
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06327, KAKENHI-PROJECT-19K03645, KAKENHI-PROJECT-20K17948
[Journal Article] Morphological changes and their advantages in Bacillus subtilis colonies responding to environmental pH variation.2018
- Author(s)
  Sohei Tasaki, Maika Nakayama, Wataru Shoji
- Journal Title
  
  RIMS Kokyuroku
  
  Volume: 2087 Issue: 5 Pages: 24-30
- DOI
  10.1111/dgd.12383
- NAID
  120006861197
- Open Access
- Data Source
  KAKENHI-PLANNED-17H06327
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2024
- Author(s)
  Tasaki S
- Organizer
  Turing Symposium on Morphogenesis, 2024
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2024
- Author(s)
  Tasaki S
- Organizer
  KSMB-SMB2024SEOUL
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2024
- Author(s)
  Tasaki S
- Organizer
  Turing Symposium on Morphogenesis, 2024
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Multilevel concepts in bacterial cell populations2024
- Author(s)
  Tasaki S
- Organizer
  7th Joint Conference of A3 Foresight Program on Computational and Applied Mathematics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] Mathematical analysis of motility response to resources in bacterial cell populations2024
- Author(s)
  Tasaki S
- Organizer
  ReaDiNet 2024: Recent Progresses in the theory of reaction and diffusion equations
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2023
- Author(s)
  Tasaki S
- Organizer
  One-day workshop on pattern dynamics appearing in reaction-diffusion system
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] 細菌細胞集団の形態形成に関するマルチレベル数理モデリング法2023
- Author(s)
  田崎創平
- Organizer
  反応拡散系パターンダイナミクスの新展開
- Invited
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] 細菌細胞集団の形態形成に関するマルチレベル数理モデリング法2023
- Author(s)
  田崎創平
- Organizer
  反応拡散系パターンダイナミクスの新展開
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 枯草菌の集団形態形成の実験と数理2023
- Author(s)
  田崎創平
- Organizer
  札幌非線形現象研究会2023
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2023
- Author(s)
  Tasaki S
- Organizer
  10th International Congress on Industrial and Applied Mathematics (ICIAM2023)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2023
- Author(s)
  Tasaki S
- Organizer
  One-day workshop on pattern dynamics appearing in reaction-diffusion system
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2023
- Author(s)
  Tasaki S
- Organizer
  International Conference on Recent Developments of Theory and Methods in Mathematical Biology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] 2次元円盤領域における線形弾性作用素の固有値・固有関数2023
- Author(s)
  田崎創平
- Organizer
  2023日本数学会秋季総合分科会
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] 腸管上皮細胞社会における脱分化現象の数理解析2023
- Author(s)
  Sohei Tasaki, Hiroki Nagai, Luis Augusto Eijy Nagai, Ryuichiro Nakato, Masayuki Miura, Yu-ichiro Nakajima
- Organizer
  2023日本数学会年会
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 2次元円盤領域における線形弾性作用素の固有値・固有関数2023
- Author(s)
  田崎創平
- Organizer
  2023日本数学会秋季総合分科会
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 枯草菌の集団形態形成の実験と数理2023
- Author(s)
  田崎創平
- Organizer
  札幌非線形現象研究会2023
- Invited
- Data Source
  KAKENHI-PROJECT-23K03208
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2023
- Author(s)
  Tasaki S
- Organizer
  International Conference on Recent Developments of Theory and Methods in Mathematical Biology
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2023
- Author(s)
  Tasaki S
- Organizer
  10th International Congress on Industrial and Applied Mathematics (ICIAM2023)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Multi-agent modelとphase-fieldモデルによる血管新生シミュレーション2022
- Author(s)
  米倉晴紀、中澤嵩、田崎創平、中井清彦
- Organizer
  日本応用数理学会第18回研究部会連合発表会
- Data Source
  KAKENHI-PLANNED-17H06327
[Presentation] 細胞のシグナル伝達系のデータ同化2022
- Author(s)
  田崎創平
- Organizer
  日本応用数理学会2022年度年会
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Multi-agent modelとphase-fieldモデルによる血管新生シミュレーション2022
- Author(s)
  米倉晴紀、中澤嵩、田崎創平、中井清彦
- Organizer
  日本応用数理学会第18回研究部会連合発表会
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 腸管上皮細胞社会における脱分化現象の数理解析2022
- Author(s)
  Sohei Tasaki, Hiroki Nagai, Luis Augusto Eijy Nagai, Ryuichiro Nakato, Masayuki Miura, Yu-ichiro Nakajima
- Organizer
  2022年度応用数学合同研究集会
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Secondary bifurcation and the direction of bifurcation of stationary solutions to a phase field model2022
- Author(s)
  森竜樹, 田崎創平, 辻川亨, 四ツ谷晶二
- Organizer
  2022日本数学会秋季総合分科会
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 腸管上皮細胞社会における脱分化現象の数理解析2022
- Author(s)
  Sohei Tasaki, Hiroki Nagai, Luis Augusto Eijy Nagai, Ryuichiro Nakato, Masayuki Miura, Yu-ichiro Nakajima
- Organizer
  日本応用数理学会2022年度年会
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 環境変動に対する枯草菌の集団形態2021
- Author(s)
  田崎創平
- Organizer
  第117回HMMCセミナー
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Morphologies of Bacillus subtilis communities responding to environmental variation2021
- Author(s)
  Sohei Tasaki
- Organizer
  Modeling and Mathematical Analysis of Dynamics of Patterns
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 細胞のシグナル伝達系のデータ同化2021
- Author(s)
  田崎創平
- Organizer
  北海道大学偏微分方程式セミナー
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Morphologies of Bacillus subtilis communities responding to environmental variation2021
- Author(s)
  Sohei Tasaki
- Organizer
  The 22ND RIES-Hokudai International Symposium ‘癒’ [Yu]
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 細胞のシグナル伝達系のデータ同化2021
- Author(s)
  田崎創平
- Organizer
  第5回マルチNGSオミクス解析研究会
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Morphologies of Bacillus subtilis communities responding to environmental variation2020
- Author(s)
  Sohei Tasaki
- Organizer
  JSPS Core-to-Core Program “Establishing International Research Network of Mathematical Oncology”
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 環境変動に対する枯草菌の集団形態2020
- Author(s)
  田崎創平
- Organizer
  明治非線型数理セミナー・秋の学校
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] A mathematical modeling approach to epigenetic dynamics2020
- Author(s)
  Sohei Tasaki
- Organizer
  9th ASHBi Colloquium
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] 環境変動に対する枯草菌の集団形態2020
- Author(s)
  田崎創平
- Organizer
  MIMS研究集会「現象と数理モデルー数理モデリング学の形成に向けてー」
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] A mathematical modeling approach to epigenetic dynamics2020
- Author(s)
  Sohei Tasaki
- Organizer
  9th ASHBi Colloquium
- Invited
- Data Source
  KAKENHI-PLANNED-17H06327
[Presentation] データ同化による多階層生命科学2020
- Author(s)
  田崎創平
- Organizer
  日本数理生物学会2020
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Morphologies of Bacillus subtilis communities responding to environmental variation2020
- Author(s)
  Sohei Tasaki
- Organizer
  JSPS Core-to-Core Program “Establishing International Research Network of Mathematical Oncology”
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06327
[Presentation] 環境変動に対する枯草菌の集団形態2020
- Author(s)
  田崎創平
- Organizer
  第32回さいたま数理解析セミナー
- Invited
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Morphologies of Bacillus subtilis communities responding to environmental variation2019
- Author(s)
  Tasaki S
- Organizer
  Modeling Biological Phenomena by Parabolic PDEs and their Analysis
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Challenge to uncover the mystery of meshwork structure of migrating mesoderm cell during chicken gastrulation2019
- Author(s)
  Nakaya Y, Tasaki S, Isomura A, Shibata T
- Organizer
  新学術領域「細胞社会ダイバーシティーの統合的解明と制御」第4回公開シンポジウム
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Mesoderm cells collectively migrate in the form of dynamic meshwork during chick gastrulation2019
- Author(s)
  Nakaya U, Tasaki S, Isomura A, Shibata T
- Organizer
  The 42nd Annual Meeting of The Molecular Biology Society of Japan
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Mesoderm cells collectively migrate in the form of dynamic meshwork during chick gastrulation2019
- Author(s)
  Nakaya Y, Tasaki S, Isomura A, Shibata T
- Organizer
  EMBO-EMBL Symposium: Mechanical Forces in Development
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645
[Presentation] Roles of N-cadherin mediated cell-cell contact in collective cell migration during chick mesoderm formation2019
- Author(s)
  Nakaya Y, Tasaki S, Isomura A, Shibata T
- Organizer
  52nd Annual Meeting of the Japanese Society of Developmental Biologists
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K03645

1. FUJITA Naoya (20280951)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
2. 高木聡 (20582240)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. 竹本愛 (20706494)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 片山量平 (60435542)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 鈴木貴

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Tasaki Sohei 田崎 創平

Research Projects

Research Products

Co-Researchers

Construction and analysis of a hybrid mathematical model describing the dynamics of bacterial cellular societyPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Creation of multilevel model for predicting self-organization of bacterial populationPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Integrated analysis and regulation of cellular diversity for disease treatment

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Turing patterns on polymerized membranes: coarse-grained lattice modelling with an internal degree of freedom for polymer direction2025

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Numerical study of anisotropic diffusion in Turing patterns based on Finsler geometry modeling2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] scEGOT: single-cell trajectory inference framework based on entropic Gaussian mixture optimal transport2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Nutrient-driven dedifferentiation of enteroendocrine cells promotes adaptive intestinal growth in Drosophila2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Multicellular model of angiogenesis2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] All global bifurcation diagrams of stationary solutions to a phase field model2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Time Changes in the VEGF-A Concentration Gradient Lead Neovasculature to Engage in Stair-Like Growth2021

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Morphological changes and their advantages in Bacillus subtilis colonies responding to environmental pH variation.2018

Author(s)

Journal Title

DOI

NAID

Data Source

[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2024

Author(s)

Organizer

Data Source

[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2024

Author(s)

Organizer

Data Source

[Presentation] Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations2024

Author(s)

Organizer

Data Source

[Presentation] Multilevel concepts in bacterial cell populations2024

Author(s)

Organizer

Data Source

Tasaki Sohei 田崎創平