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Ohue Masahito  大上 雅史

Researcher Number 50743209
Other IDs
  • ORCIDhttps://orcid.org/0000-0002-0120-1643
Affiliation (Current) 2025: 東京科学大学, 情報理工学院, 准教授
Affiliation (based on the past Project Information) *help 2023 – 2024: 東京工業大学, 情報理工学院, 准教授
2016 – 2022: 東京工業大学, 情報理工学院, 助教
2015: 東京工業大学, 情報理工学(系)研究科, 助教
Review Section/Research Field
Principal Investigator
Basic Section 62010:Life, health and medical informatics-related / Transformative Research Areas, Section (II) / Life / Health / Medical informatics
Except Principal Investigator
Basic Section 62010:Life, health and medical informatics-related / Life / Health / Medical informatics / Basic Section 53040:Nephrology-related / Transformative Research Areas, Section (II)
Keywords
Principal Investigator
バイオインフォマティクス / タンパク質間相互作用 / 医薬品設計 / ケモインフォマティクス / 分子設計 / インタラクトーム / 中分子創薬 / タンパク質構造予測 / 環状ペプチド / bRO5化合物 … More / 深層学習 / 化合物潜在空間 / 高性能計算 / 機械学習 / AI創薬 / 創薬支援 / ミトコンドリアタンパク質 / アミノ酸相互作用プロファイル / 中規模ペプチド / プロファイル / MEGADOCK / ペプチド分子 / MEGADOCK-Web / 構造インフォマティクス / アミノ酸配列 / 中分子 / ランク学習 / カーネル法 / 標的予測 / 分子ドッキング / ペプチド創薬 … More
Except Principal Investigator
ドラッグデザイン / ヒューマンコンピュテーション / 創薬計算科学 / 創薬知 / オープンサイエンス / 化合物空間 / ケムインフォマティクス / 深層学習 / 生体生命情報学 / Dendrin / MAGI-2 / ポドサイト / スリット膜 / 慢性腎臓病 / 蛋白尿 / 天然物有機化学 / ケミカルバイオロジー / 生物活性分子 / 化合物潜在空間 / 創薬計算化学 / 大規模言語モデル / 化学構造生成モデル / バーチャルスクリーニング / シチズンサイエンス / 可視化 / 分子構造 / ソーシャルネットワーキングサービス / 機械学習 / 分子動力学法 / 血漿タンパク質結合率 / 膜透過性 / 中分子創薬 / 環状ペプチド / 生命生体情報学 / 相互作用ネットワーク / プロファイル / タンパク質間相互作用 / 網羅的ドッキング / 相互作用プロファイル / タンパク質間相互作用ネットワーク予測 Less
  • Research Projects

    (11 results)
  • Research Products

    (302 results)
  • Co-Researchers

    (17 People)
  •  天然物が織り成す化合物潜在空間が拓く生物活性分子デザイン

    • Principal Investigator
      菊地 和也
    • Project Period (FY)
      2023 – 2027
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (II)
    • Research Institution
      Osaka University
  •  Latent Chemical Space for Beyond Rule-of-Five CompoundsPrincipal Investigator

    • Principal Investigator
      大上 雅史
    • Project Period (FY)
      2023 – 2027
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (II)
    • Research Institution
      Institute of Science Tokyo
  •  Functional analysis of slit diaphragm associated protein MAGI-2 and development of a novel CKD therapeutic agent

    • Principal Investigator
      淺沼 克彦
    • Project Period (FY)
      2023 – 2025
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 53040:Nephrology-related
    • Research Institution
      Chiba University
  •  Development of cyclic peptide-protein complex structure database and peptide design methodPrincipal Investigator

    • Principal Investigator
      大上 雅史
    • Project Period (FY)
      2023 – 2025
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      Institute of Science Tokyo
  •  Taming "untamed" generative AIs by developing compound optimization support tools that enable the interactive use of domain knowledge in medicinal chemistry

    • Principal Investigator
      山本 一樹
    • Project Period (FY)
      2022 – 2024
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      The University of Tokyo
  •  Development of a computational drug design method for targeting protein-protein interactionsPrincipal Investigator

    • Principal Investigator
      Ohue Masahito
    • Project Period (FY)
      2020 – 2022
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      Tokyo Institute of Technology
  •  Integrated implementation of human computation and computational drug discovery

    • Principal Investigator
      Yamamoto Kazuki
    • Project Period (FY)
      2018 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      The University of Tokyo
  •  Computational prediction of mitochondrial protein interactomePrincipal Investigator

    • Principal Investigator
      Ohue Masahito
    • Project Period (FY)
      2018 – 2020
    • Research Category
      Grant-in-Aid for Early-Career Scientists
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      Tokyo Institute of Technology
  •  Development of computational methods for supporting druggable cyclic peptide design

    • Principal Investigator
      Akiyama Yutaka
    • Project Period (FY)
      2017 – 2019
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Life / Health / Medical informatics
    • Research Institution
      Tokyo Institute of Technology
  •  アミノ酸残基レベルの相互作用プロファイルを用いたタンパク質間相互作用予測法の開発

    • Principal Investigator
      内古閑 伸之
    • Project Period (FY)
      2015 – 2017
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Life / Health / Medical informatics
    • Research Institution
      Tokyo Institute of Technology
      Chuo University
  •  Development of a computational peptide-protein interaction prediction method based on their tertiary structuresPrincipal Investigator

    • Principal Investigator
      Ohue Masahito
    • Project Period (FY)
      2015 – 2017
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Life / Health / Medical informatics
    • Research Institution
      Tokyo Institute of Technology

All 2024 2023 2022 2021 2020 2019 2018 2017 2016 2015

All Journal Article Presentation

  • [Journal Article] Mathematical modeling and problem solving: from fundamentals to applications2024

    • Author(s)
      Ohue Masahito、Sasayama Kotoyu、Takata Masami
    • Journal Title

      The Journal of Supercomputing

      Volume: - Issue: 10 Pages: 14116-14119

    • DOI

      10.1007/s11227-024-06007-x

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] Antibody complementarity-determining region design using AlphaFold2 and DDG predictor2024

    • Author(s)
      Ueki Takafumi、Ohue Masahito
    • Journal Title

      The Journal of Supercomputing

      Volume: - Issue: 9 Pages: 11989-12002

    • DOI

      10.1007/s11227-023-05887-9

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] Enhancing property and activity prediction and interpretation using multiple molecular graph representations with MMGX2024

    • Author(s)
      Kengkanna Apakorn、Ohue Masahito
    • Journal Title

      Communications Chemistry

      Volume: 7 Issue: 1 Pages: 74-74

    • DOI

      10.1038/s42004-024-01155-w

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Journal Article] Fastlomap: faster lead optimization mapper algorithm for large-scale relative free energy perturbation2024

    • Author(s)
      Furui Kairi、Ohue Masahito
    • Journal Title

      The Journal of Supercomputing

      Volume: - Issue: 10 Pages: 14417-14432

    • DOI

      10.1007/s11227-024-06006-y

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-23H04887, KAKENHI-PROJECT-23K28186
  • [Journal Article] SpatialPPI: Three-dimensional space protein-protein interaction prediction with AlphaFold Multimer2024

    • Author(s)
      Hu Wenxing、Ohue Masahito
    • Journal Title

      Computational and Structural Biotechnology Journal

      Volume: 23 Pages: 1214-1225

    • DOI

      10.1016/j.csbj.2024.03.009

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] Generating Potential Protein-Protein Interaction Inhibitor Molecules Based on Physicochemical Properties2023

    • Author(s)
      Ohue Masahito、Kojima Yuki、Kosugi Takatsugu
    • Journal Title

      Molecules

      Volume: 28 Issue: 15 Pages: 5652-5652

    • DOI

      10.3390/molecules28155652

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Journal Article] MEGADOCK-on-Colab: an easy-to-use protein?protein docking tool on Google Colaboratory2023

    • Author(s)
      Ohue Masahito
    • Journal Title

      BMC Research Notes

      Volume: 16 Issue: 1 Pages: 229-229

    • DOI

      10.1186/s13104-023-06505-w

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] AlphaFoldによるタンパク質立体構造予測(実践編)2023

    • Author(s)
      大上雅史
    • Journal Title

      Seibutsu-kogaku Kaishi

      Volume: 101 Issue: 8 Pages: 443-446

    • DOI

      10.34565/seibutsukogaku.101.8_443

    • ISSN
      0919-3758, 2435-8630
    • Year and Date
      2023-08-25
    • Language
      Japanese
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] Editorial: Web tools for modeling and analysis of biomolecular interactions Volume II2023

    • Author(s)
      Andreani Jessica、Jimenez-Garcia Brian、Ohue Masahito
    • Journal Title

      Frontiers in Molecular Biosciences

      Volume: 10 Pages: 1190855-1190855

    • DOI

      10.3389/fmolb.2023.1190855

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] Design of Cyclic Peptides Targeting Protein?Protein Interactions Using AlphaFold2023

    • Author(s)
      Kosugi Takatsugu、Ohue Masahito
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 24 Issue: 17 Pages: 13257-13257

    • DOI

      10.3390/ijms241713257

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] AlphaFoldによる高精度なタンパク質立体構造予測と創薬への応用2023

    • Author(s)
      大上雅史
    • Journal Title

      PHARM STAGE

      Volume: 23 Pages: 24-28

    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] Antibody Complementarity-Determining Region Sequence Design Using AlphaFold2 and Binding Affinity Prediction Model2023

    • Author(s)
      Ueki Takafumi、Ohue Masahito
    • Journal Title

      2023 Congress in Computer Science, Computer Engineering, & Applied Computing (CSCE)

      Volume: - Pages: 2133-2139

    • DOI

      10.1109/csce60160.2023.00350

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] AIによって変わる生命科学2023

    • Author(s)
      大上雅史
    • Journal Title

      現代化学 2023年8月号

      Volume: - Pages: 28-32

    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Journal Article] PPI(タンパク質間相互作用)を標的とするドラッグデザイン.2023

    • Author(s)
      大上雅史
    • Journal Title

      タンパク質の構造解析手法とIn silicoスクリーニングへの応用事例

      Volume: - Pages: 402-410

    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Journal Article] LLM Drug Discovery Challenge: A Contest as a Feasibility Study on the Utilization of Large Language Models in Medicinal Chemistry2023

    • Author(s)
      Kusuri Murakumo, Naruki Yoshikawa, Kentaro Rikimaru, Shogo Nakamura, Kairi Furui, Takamasa Suzuki, Hiroyuki Yamasaki, Yuki Nishigaya, Yuzo Takagi, Masahito Ohue
    • Journal Title

      NeurIPS 2023 Workshop AI4Mat

      Volume: -

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22K12258
  • [Journal Article] Generating Potential Protein-Protein Interaction Inhibitor Molecules Based on Physicochemical Properties2023

    • Author(s)
      Ohue M, Kojima Y, Kosugi T
    • Journal Title

      Preprints.org

      Volume: -

    • DOI

      10.20944/preprints202305.0704.v1

    • Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Variational autoencoder-based chemical latent space for large molecular structures with 3D complexity2023

    • Author(s)
      Ochiai Toshiki、Inukai Tensei、Akiyama Manato、Furui Kairi、Ohue Masahito、Matsumori Nobuaki、Inuki Shinsuke、Uesugi Motonari、Sunazuka Toshiaki、Kikuchi Kazuya、Kakeya Hideaki、Sakakibara Yasubumi
    • Journal Title

      Communications Chemistry

      Volume: 6 Issue: 1 Pages: 249-249

    • DOI

      10.1038/s42004-023-01054-6

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23KK0106, KAKENHI-PROJECT-22K19115, KAKENHI-ORGANIZER-23H04880, KAKENHI-PLANNED-23H04882, KAKENHI-PLANNED-23H04885, KAKENHI-PLANNED-23H04887, KAKENHI-PROJECT-20H00405, KAKENHI-PROJECT-21H04706
  • [Journal Article] CycPeptMPDB: A Comprehensive Database of Membrane Permeability of Cyclic Peptides2023

    • Author(s)
      Li Jianan、Yanagisawa Keisuke、Sugita Masatake、Fujie Takuya、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      Journal of Chemical Information and Modeling

      Volume: 63 Issue: 7 Pages: 2240-2250

    • DOI

      10.1021/acs.jcim.2c01573

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280, KAKENHI-PROJECT-20K19917, KAKENHI-PROJECT-23K24939, KAKENHI-PROJECT-23KJ0891
  • [Journal Article] Enhancing Model Learning and Interpretation using Multiple Molecular Graph Representations for Compound Property and Activity Prediction2023

    • Author(s)
      Kengkanna Apakorn、Ohue Masahito
    • Journal Title

      The 20th IEEE International Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB 2023)

      Volume: - Pages: 1-8

    • DOI

      10.1109/cibcb56990.2023.10264879

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Journal Article] Faster Lead Optimization Mapper Algorithm for Large-Scale Relative Free Energy Perturbation2023

    • Author(s)
      Furui Kairi、Ohue Masahito
    • Journal Title

      2023 Congress in Computer Science, Computer Engineering, & Applied Computing (CSCE)

      Volume: - Pages: 2126-2132

    • DOI

      10.1109/csce60160.2023.00349

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-23H04887, KAKENHI-PROJECT-23K28186
  • [Journal Article] The Indole Rocaglamide Induces S and G2/M Phase Cell Cycle Arrest in Small Cell Lung Cancer Cells Through ASCL1 Translation Inhibition2023

    • Author(s)
      Arai Midori、Makita Yoshinori、Saito Shun、Suzuki Shiina、Narushima Yuki、Izawa Nanoha、Tanaka Yuki、Furui Kairi、Ohue Masahito、Ishibashi Masami
    • Journal Title

      SSRN preprint

      Volume: -

    • DOI

      10.2139/ssrn.4493242

    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Journal Article] Solubility-Aware Protein Binding Peptide Design Using AlphaFold2022

    • Author(s)
      Kosugi T, Ohue M
    • Journal Title

      Biomedicines

      Volume: 10 Issue: 7 Pages: 1626-1626

    • DOI

      10.3390/biomedicines10071626

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Editorial: Web Tools for Modeling and Analysis of Biomolecular Interactions2022

    • Author(s)
      Andreani Jessica、Ohue Masahito、Jimenez-Garcia Brian
    • Journal Title

      Frontiers in Molecular Biosciences

      Volume: 9

    • DOI

      10.3389/fmolb.2022.875859

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] 中分子ペプチド創薬のインフォマティクス2022

    • Author(s)
      大上雅史
    • Volume
      41
    • Pages
      20
    • DOI

      10.18958/7173-00001-0000342-00

    • Language
      Japanese
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Compound Virtual Screening by Learning-to-Rank with Gradient Boosting Decision Tree and Enrichment-based Cumulative Gain2022

    • Author(s)
      Furui K, Ohue M
    • Journal Title

      Proceedings of IEEE CIBCB 2022

      Volume: - Pages: 1-7

    • DOI

      10.1109/cibcb55180.2022.9863032

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] AlphaFold2の登場と創薬への影響2022

    • Author(s)
      大上雅史
    • Journal Title

      革新的AI創薬~医療ビッグデータ、人工知能がもたらす創薬研究の未来像

      Volume: - Pages: 164-175

    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions2021

    • Author(s)
      Kosugi T, Ohue M
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 22 Issue: 20 Pages: 10925-10925

    • DOI

      10.3390/ijms222010925

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Quantitative Estimate of Protein-Protein Interaction Targeting Drug-likeness2021

    • Author(s)
      Kosugi T, Ohue M
    • Journal Title

      Proceedings of IEEE CIBCB 2021

      Volume: - Pages: 1-8

    • DOI

      10.1109/cibcb49929.2021.9562931

    • NAID

      120007172602

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Drug-target affinity prediction using applicability domain based on data density.2021

    • Author(s)
      Sugita S, Ohue M
    • Journal Title

      ChemRxiv

      Volume: -

    • DOI

      10.26434/chemrxiv.14498688.v1

    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] MEGADOCK-GUI: a GUI-based complete cross-docking tool for exploring protein-protein interactions2021

    • Author(s)
      Ohue M, Akiyama Y
    • Journal Title

      In Proceedings of The 27th International Conference on Parallel & Distributed Processing Techniques and Applications (PDPTA’21)

      Volume: -

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Drug-target affinity prediction using applicability domain based on data density2021

    • Author(s)
      Sugita S, Ohue M
    • Journal Title

      Proceedings of IEEE CIBCB 2021

      Volume: - Pages: 1-6

    • DOI

      10.1109/cibcb49929.2021.9562808

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] MEGADOCK-Web-Mito: human mitochondrial protein-protein interaction prediction database2021

    • Author(s)
      Ohue M, Watanabe H, Akiyama Y.
    • Journal Title

      In Proceedings of The 27th International Conference on Parallel & Distributed Processing Techniques and Applications (PDPTA’21)

      Volume: -

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] High-Performance Cloud Computing for Exhaustive Protein-Protein Docking2021

    • Author(s)
      Ohue M, Aoyama K, Akiyama Y
    • Journal Title

      Advances in Parallel & Distributed Processing and Applications

      Volume: - Pages: 737-746

    • DOI

      10.1007/978-3-030-69984-0_53

    • ISBN
      9783030699833, 9783030699840
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Quantitative Estimate of Protein-Protein Interaction Targeting Drug-likeness2021

    • Author(s)
      Kosugi T, Ohue M
    • Journal Title

      ChemRxiv

      Volume: -

    • DOI

      10.26434/chemrxiv.14489769.v1

    • NAID

      120007172602

    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Re-ranking of computational protein-peptide docking solutions with amino acid profiles of rigid-body docking results2020

    • Author(s)
      Ohue M
    • Journal Title

      Advances in Computer Vision and Computational Biology

      Volume: -

    • DOI

      10.1101/2020.05.12.092007

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Rescoring ensembles of protein-protein docking poses using consensus approaches2020

    • Author(s)
      Launay Guillaume、Ohue Masahito、Santero Julia Prieto、Matsuzaki Yuri、Hilpert C?cile、Uchikoga Nobuyuki、Hayashi Takanori、Martin Juliette
    • Journal Title

      bioRxiv

      Volume: 2020.04.24.059469

    • DOI

      10.1101/2020.04.24.059469

    • Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Journal Article] Development of computational pipeline software for genome/exome analysis on the K computer2020

    • Author(s)
      Aoyama Kento, Kakuta Masanori, Matsuzaki Yuri, Ishida Takashi, Ohue Masahito, Akiyama Yutaka
    • Journal Title

      Supercomputing Frontiers and Innovations

      Volume: accepted

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Journal Article] 構造情報に基づくタンパク質間相互作用の計算予測2020

    • Author(s)
      大上雅史
    • Journal Title

      ファインケミカル

      Volume: 10月号 Pages: 25-31

    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Multiple HPC Environments-Aware Container Image Configuration Workflow for Large-Scale All-to-All Protein?Protein Docking Calculations2020

    • Author(s)
      Aoyama Kento、Watanabe Hiroki、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      In Proceedings of the 6th Asian Conference on Supercomputing Frontiers (SCFA2020), Lecture Notes in Computer Science

      Volume: 12082 Pages: 23-39

    • DOI

      10.1007/978-3-030-48842-0_2

    • ISBN
      9783030488413, 9783030488420
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Journal Article] High-performance cloud computing for exhaustive protein-protein docking2020

    • Author(s)
      Ohue M, Aoyama K, Akiyama Y
    • Journal Title

      Advances in Parallel & Distributed Processing and Applications

      Volume: -

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Multidomain protein structure prediction using information about residues interacting on multimeric protein interfaces2020

    • Author(s)
      Matsuno Shumpei, Ohue Masahito, Akiyama Yutaka
    • Journal Title

      Biophysics and Physicobiology

      Volume: 17 Issue: 0 Pages: 2-13

    • DOI

      10.2142/biophysico.BSJ-2019050

    • NAID

      130007795865

    • ISSN
      2189-4779
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-18K18149
  • [Journal Article] Evaluation of CONSRANK-Like Scoring Functions for Rescoring Ensembles of Protein?Protein Docking Poses2020

    • Author(s)
      Launay G, Ohue M, Santero JP, Matsuzaki M, Hilpert C, Uchikoga N, Hayashi T, Martin J
    • Journal Title

      Frontiers in Molecular Biosciences

      Volume: 7 Pages: 559005-559005

    • DOI

      10.3389/fmolb.2020.559005

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Journal Article] Parallelized Pipeline for Whole Genome Shotgun Metagenomics with GHOSTZ-GPU and MEGAN2019

    • Author(s)
      Ohue Masahito、Yamasawa Marina、Izawa Kazuki、Akiyama Yutaka
    • Journal Title

      In Proceedings of the 19th annual IEEE International Conference on Bioinformatics and Bioengineering (IEEE BIBE 2019)

      Volume: - Pages: 152-156

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Journal Article] A playful tool for predicting protein-protein docking2019

    • Author(s)
      Jiang Keren、Zhang Di、Iino Tsubasa、Kimura Risa、Nakajima Tatsuo、Shimizu Kana、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      In Proceedings of the 18th International Conference on Mobile and Ubiquitous Multimedia (MUM 2019)

      Volume: - Pages: 5-5

    • DOI

      10.1145/3365610.3368409

    • Open Access
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Journal Article] NRLMFβ: Beta-distribution-rescored neighborhood regularized logistic matrix factorization for improving the performance of drug?target interaction prediction2019

    • Author(s)
      Ban Tomohiro、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      Biochemistry and Biophysics Reports

      Volume: 18 Pages: 100615-100615

    • DOI

      10.1016/j.bbrep.2019.01.008

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K18149, KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-17H01814
  • [Journal Article] Molecular activity prediction using graph convolutional deep neural network considering distance on a molecular graph2019

    • Author(s)
      Masahito Ohue, Ryota Ii, Keisuke Yanagisawa, Yutaka Akiyama
    • Journal Title

      In Proceedings of the 2019 International Conference on Parallel and Distributed Processing Techniques & Applications (PDPTA'19)

      Volume: - Pages: 122-128

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Journal Article] Learning-to-rank technique based on ignoring meaningless ranking orders between compounds2019

    • Author(s)
      Ohue Masahito, Suzuki Shogo D., Akiyama Yutaka
    • Journal Title

      Journal of Molecular Graphics and Modelling

      Volume: 92 Pages: 192-200

    • DOI

      10.1016/j.jmgm.2019.07.009

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-18K18149
  • [Journal Article] Performance evaluation of MEGADOCK protein-protein interaction prediction system implemented with distributed containers on a cloud computing environment2019

    • Author(s)
      Kento Aoyama, Yuki Yamamoto, Masahito Ohue, Yutaka Akiyama
    • Journal Title

      In Proceedings of the 2019 International Conference on Parallel and Distributed Processing Techniques & Applications (PDPTA'19)

      Volume: - Pages: 175-181

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Journal Article] Multiple grid arrangement improves ligand docking with unknown binding sites: Application to the inverse docking problem2018

    • Author(s)
      Tomohiro Ban, Masahito Ohue, and Yutaka Akiyama
    • Journal Title

      Computational Biology and Chemistry

      Volume: 73 Pages: 139-146

    • DOI

      10.1016/j.compbiolchem.2018.02.008

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15J11261, KAKENHI-PROJECT-15K16081, KAKENHI-PROJECT-17H01814
  • [Journal Article] The DEAD-box RNA-binding protein DDX6 regulates parental RNA decay for cellular reprogramming to pluripotency.2018

    • Author(s)
      Kami D, Kitani T, Nakamura A, Wakui N, Mizutani R, Ohue M, Kametani F, Akimitsu N, Gojo S.
    • Journal Title

      PLoS One

      Volume: 13 Issue: 10 Pages: e0203708-e0203708

    • DOI

      10.1371/journal.pone.0203708

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17K10149, KAKENHI-PROJECT-18K18149, KAKENHI-PROJECT-17H01814
  • [Journal Article] Exploring the selectivity of inhibitor complexes with Bcl-2 and Bcl-XL: A molecular dynamics simulation approach2018

    • Author(s)
      Wakui Naoki、Yoshino Ryunosuke、Yasuo Nobuaki、Ohue Masahito、Sekijima Masakazu
    • Journal Title

      Journal of Molecular Graphics and Modelling

      Volume: 79 Pages: 166-174

    • DOI

      10.1016/j.jmgm.2017.11.011

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-16J09021, KAKENHI-PROJECT-15K16081
  • [Journal Article] Optimization of memory use of fragment extension-based protein-ligand docking with an original fast minimum cost flow algorithm2018

    • Author(s)
      Yanagisawa Keisuke、Komine Shunta、Kubota Rikuto、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      Computational Biology and Chemistry

      Volume: 印刷中 Pages: 399-406

    • DOI

      10.1016/j.compbiolchem.2018.03.013

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15K16081, KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-17J06897
  • [Journal Article] MEGADOCK-Web: an integrated database of high-throughput structure-based protein-protein interaction predictions.2018

    • Author(s)
      Takanori Hayashi, Yuri Matsuzaki, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
    • Journal Title

      BMC Bioinformatics

      Volume: 19 Issue: S4 Pages: 62-72

    • DOI

      10.1186/s12859-018-2073-x

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16K00388, KAKENHI-PROJECT-18K18149, KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-17J06897
  • [Journal Article] Computational prediction of plasma protein binding of cyclic peptides from small molecule experimental data using sparse modeling techniques2018

    • Author(s)
      Tajimi Takashi、Wakui Naoki、Yanagisawa Keisuke、Yoshikawa Yasushi、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      BMC Bioinformatics

      Volume: 19 Issue: S19 Pages: 527-527

    • DOI

      10.1186/s12859-018-2529-z

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K18149, KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-17J06897
  • [Journal Article] MEGADOCK-Web: an integrated database of high-throughput structure-based protein-protein interaction predictions2018

    • Author(s)
      akanori Hayashi、Yuri Matsuzaki、Keisuke Yanagisawa、Masahito Ohue、Yutaka Akiyama
    • Journal Title

      BMC Bioinformatics

      Volume: 印刷中

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Journal Article] QEX: target-specific druglikeness filter enhances ligand-based virtual screening2018

    • Author(s)
      Mochizuki Masahiro、Suzuki Shogo D.、Yanagisawa Keisuke、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      Molecular Diversity

      Volume: 23 Issue: 1 Pages: 11-18

    • DOI

      10.1007/s11030-018-9842-3

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-17J06897
  • [Journal Article] Link Mining for Kernel-Based Compound-Protein Interaction Predictions Using a Chemogenomics Approach2017

    • Author(s)
      Ohue Masahito、Yamazaki Takuro、Ban Tomohiro、Akiyama Yutaka
    • Journal Title

      In Proceedings of the Thirteenth International Conference On Intelligent Computing (ICIC2017) (Lecture Notes in Computer Science)

      Volume: - Pages: 549-558

    • DOI

      10.1007/978-3-319-63312-1_48

    • ISBN
      9783319633114, 9783319633121
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-15K16081
  • [Journal Article] Link Mining for Kernel-based Compound-Protein Interaction Predictions Using a Chemogenomics Approach2017

    • Author(s)
      Masahito Ohue, Takuro Yamazaki, Tomohiro Ban, Yutaka Akiyama
    • Journal Title

      Lecture Note of Computer Science (In Proceedings of ICIC2017)

      Volume: in press

    • Peer Reviewed / Acknowledgement Compliant
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Journal Article] PKRank: a novel learning-to-rank method for ligand-based virtual screening using pairwise kernel and RankSVM2017

    • Author(s)
      Suzuki Shogo D.、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      Artificial Life and Robotics

      Volume: - Issue: 2 Pages: 205-212

    • DOI

      10.1007/s10015-017-0416-8

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-15K16081, KAKENHI-PROJECT-17H01814
  • [Journal Article] Efficient hyperparameter optimization by using Bayesian optimization for drug-target interaction prediction2017

    • Author(s)
      Ban Tomohiro、Ohue Masahito、Akiyama Yutaka
    • Journal Title

      In Proceedings of the 7th IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS 2017)

      Volume: - Pages: 1-8

    • DOI

      10.1109/iccabs.2017.8114299

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-15K16081
  • [Journal Article] Spresso: An ultrafast compound pre-screening method based on compound decomposition2017

    • Author(s)
      Keisuke Yanagisawa, Shunta Komine, Shogo D. Suzuki, Masahito Ohue, Takashi Ishida, Yutaka Akiyama
    • Journal Title

      Bioinformatics

      Volume: 印刷中 Issue: 23 Pages: 3836-3843

    • DOI

      10.1093/bioinformatics/btx178

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-24240044, KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-15K16081, KAKENHI-PROJECT-15K16082, KAKENHI-PROJECT-17H01814, KAKENHI-PROJECT-17J06897
  • [Journal Article] GHOSTX: A Fast Sequence Homology Search Tool for Functional Annotation of Metagenomic Data2017

    • Author(s)
      Suzuki Shuji、Ishida Takashi、Ohue Masahito、Kakuta Masanori、Akiyama Yutaka
    • Journal Title

      Protein Function Prediction

      Volume: volume 1611 Pages: 15-25

    • DOI

      10.1007/978-1-4939-7015-5_2

    • ISBN
      9781493970131, 9781493970155
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Journal Article] Rigid-Docking Approaches to Explore Protein-Protein Interaction Space2016

    • Author(s)
      Yuri Matsuzaki, Nobuyuki Uchikoga Masahito Ohue, Yutaka Akiyama
    • Journal Title

      Advances in Biochemical Engineering/Biotechnology

      Volume: ー Pages: 1-23

    • DOI

      10.1007/10_2016_41

    • ISBN
      9783319564593, 9783319564609
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-24240044, KAKENHI-PROJECT-15K00407, KAKENHI-PROJECT-16K00388, KAKENHI-PROJECT-15K16081, KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-17H01814
  • [Journal Article] Specificity of broad protein interaction surfaces for proteins with multiple binding partners2016

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Journal Title

      Biophysics and Physicobiology

      Volume: 13 Issue: 0 Pages: 105-115

    • DOI

      10.2142/biophysico.13.0_105

    • NAID

      130005165366

    • ISSN
      2189-4779
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-24240044, KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-15K00407, KAKENHI-PROJECT-16K00388, KAKENHI-PROJECT-15K16081
  • [Presentation] 天然物ケミカルバイオロジーを加速する深層学習技術基盤2024

    • Author(s)
      大上雅史
    • Organizer
      日本農芸化学会2024年度大会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] AlphaFoldを用いたタンパク質-特殊環状ペプチド複合体予測2024

    • Author(s)
      冨樫慧乃辰、小杉孝嗣、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] beyond Rule-of-Five化合物の潜在空間学習と分子設計を支えるAI技術2024

    • Author(s)
      大上雅史
    • Organizer
      日本化学会第104春季年会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Beyond Rule-of-Five化合物空間を探る情報科学2024

    • Author(s)
      大上雅史
    • Organizer
      日本薬学会第144年会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] 複合体構造予測とフラグメントリンキングによるPROTAC設計手法の開発2024

    • Author(s)
      石沢涼太、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Beyond Rule-of-Five化合物空間を探る情報科学2024

    • Author(s)
      大上雅史
    • Organizer
      日本薬学会第144年会
    • Invited
    • Data Source
      KAKENHI-ORGANIZER-23H04880
  • [Presentation] 複合体構造予測とフラグメントリンキングによるPROTAC設計手法の開発2024

    • Author(s)
      石沢涼太、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] 天然物ケミカルバイオロジーを加速する深層学習技術基盤2024

    • Author(s)
      大上雅史
    • Organizer
      日本農芸化学会2024年度大会
    • Invited
    • Data Source
      KAKENHI-ORGANIZER-23H04880
  • [Presentation] beyond Rule-of-Five化合物の潜在空間学習と分子設計を支えるAI技術2024

    • Author(s)
      大上雅史
    • Organizer
      日本化学会第104春季年会
    • Invited
    • Data Source
      KAKENHI-ORGANIZER-23H04880
  • [Presentation] 対照学習を用いたGNNによる化合物特性予測2024

    • Author(s)
      青木滉志郎,大上雅史,Kengkanna Apakorn
    • Organizer
      情報処理学会第86回全国大会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] 天然物様化合物を生成する化学言語モデルの開発2024

    • Author(s)
      坂野晃,古井海里,大上雅史
    • Organizer
      情報処理学会第86回全国大会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] AIで広がる分子設計の可能性2023

    • Author(s)
      大上雅史
    • Organizer
      Visionary 農芸化学100シンポジウム / 第50回 農芸化学「化学と生物」シンポジウム
    • Invited
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] 生成AIが加速する創薬・生命科学~AlphaFold2の衝撃とTransformerアルゴリズム~2023

    • Author(s)
      大上雅史
    • Organizer
      日本学術会議公開シンポジウム「第13回計算力学シンポジウム」
    • Invited
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] 2種類の言語モデルを用いたタンパク質-化合物相互作用予測手法の開発2023

    • Author(s)
      古井海里, 大上雅史
    • Organizer
      情報処理学会研究報告 (SIGBIO)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] AIが加速する創薬・生命科学2023

    • Author(s)
      大上雅史
    • Organizer
      蔵前工業会 第46回蔵前科学技術セミナー
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] Design of scalable perturbation maps for relative binding free energy calculations2023

    • Author(s)
      Furui K, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Study of efficient perturbation map construction for large-scale free energy perturbation calculations2023

    • Author(s)
      Furui K, Ohue M
    • Organizer
      第61回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] PROTAC molecular linker design using fragment linking method2023

    • Author(s)
      Uchikawa K, Furui K, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] AIが加速する創薬・生命科学 ~AlphaFold2の衝撃とTransformerアルゴリズム2023

    • Author(s)
      大上雅史
    • Organizer
      第92回関西CAE懇話会
    • Invited
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] Spatial Predictions of Protein-Protein Interaction with AlphaFold Multimer2023

    • Author(s)
      Hu W, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] AIで広がる分子設計の可能性2023

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2023年大会
    • Invited
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] 生成AIが加速する創薬・生命科学~AlphaFold2の衝撃とTransformerアルゴリズム~2023

    • Author(s)
      大上雅史
    • Organizer
      日本学術会議公開シンポジウム「第13回計算力学シンポジウム」
    • Invited
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] AIが加速する創薬・生命科学2023

    • Author(s)
      大上雅史
    • Organizer
      蔵前工業会 第46回蔵前科学技術セミナー
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Cyclic offsetを導入したAlphaFold multimerによる環状ペプチド複合体構造予測2023

    • Author(s)
      冨樫慧乃辰、小杉孝嗣、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] AIで広がる分子設計の可能性2023

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2023年大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] PROTAC molecular linker design using fragment linking method2023

    • Author(s)
      Ishizawa R, Ohue M
    • Organizer
      第61回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] PROTAC molecular linker design using fragment linking method2023

    • Author(s)
      Ishizawa R, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] Identifying suitable AlphaFold2 protein structure models for improved structure-based virtual screening2023

    • Author(s)
      Uchikawa K, Furui K, Ohue M
    • Organizer
      第61回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] 大規模自由エネルギー摂動法計算のための摂動マップ構築アルゴリズムの高速化2023

    • Author(s)
      古井海里・大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Docking prediction of cyclic peptide-protein complex by AlphaFold Multimer with cyclic offset2023

    • Author(s)
      Togashi K, Kosugi T, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] Enhancing Ligand Property and Activity Prediction and Interpretation Using Multiple Molecular Graph Representations2023

    • Author(s)
      Apakorn Kengkanna, Masahito Ohue
    • Organizer
      情報処理学会研究報告 (SIGBIO)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Design of scalable perturbation maps for relative binding free energy calculations2023

    • Author(s)
      Furui K, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] AIが加速する創薬・生命科学 ~AlphaFold2の衝撃とTransformerアルゴリズム2023

    • Author(s)
      大上雅史
    • Organizer
      第92回関西CAE懇話会
    • Invited
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] 親和性閾値を考慮した適用領域による薬剤標的親和性予測2023

    • Author(s)
      杉田駿也, 大上雅史
    • Organizer
      情報処理学会研究報告 (SIGBIO)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Beyond Rule-of-Five 空間のAI分子設計2023

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2023年大会シンポジウム
    • Invited
    • Data Source
      KAKENHI-ORGANIZER-23H04880
  • [Presentation] AIで広がる分子設計の可能性2023

    • Author(s)
      大上雅史
    • Organizer
      生命と情報の新たなる融和:超階層生物学とAI・数理ワークショップ
    • Invited
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] 大規模自由エネルギー摂動法計算のための摂動マップ構築アルゴリズムの高速化2023

    • Author(s)
      古井海里、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] バーチャルスクリーニングに適したAlphaFold2タンパク質立体構造モデルの選択2023

    • Author(s)
      内河慶輔、古井海里、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] Study of efficient perturbation map construction for large-scale free energy perturbation calculations2023

    • Author(s)
      Furui K, Ohue M
    • Organizer
      第61回日本生物物理学会年会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] AIで広がる分子設計の可能性2023

    • Author(s)
      大上雅史
    • Organizer
      生命と情報の新たなる融和:超階層生物学とAI・数理ワークショップ
    • Invited
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] AIで広がる分子設計の可能性2023

    • Author(s)
      大上雅史
    • Organizer
      学術変革領域研究(A)潜在空間分子設計領域 第1回領域シンポジウム(キックオフシンポジウム)
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Docking prediction of cyclic peptide-protein complex by AlphaFold Multimer with cyclic offset2023

    • Author(s)
      Togashi K, Kosugi T, Ohue M
    • Organizer
      第61回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] 計算創薬・バイオインフォマティクス を支える情報技術とGPU2023

    • Author(s)
      大上雅史
    • Organizer
      2023年日本バイオインフォマティクス学会年会 第12回生命医薬情報学連合大会(IIBMP2023)
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] LLM Drug Discovery Challenge: A Contest as a Feasibility Study on the Utilization of Large Language Models in Medicinal Chemistry2023

    • Author(s)
      Kusuri Murakumo, Naruki Yoshikawa, Kentaro Rikimaru, Shogo Nakamura, Kairi Furui, Takamasa Suzuki, Hiroyuki Yamasaki, Yuki Nishigaya, Yuzo Takagi, Masahito Ohue
    • Organizer
      NeurIPS 2023 Workshop AI4Mat
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22K12258
  • [Presentation] PROTAC molecular linker design using fragment linking method2023

    • Author(s)
      Ishizawa R, Ohue M
    • Organizer
      第61回日本生物物理学会年会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Design of Cyclic Peptides Targeting Protein-Protein Interactions using AlphaFold2023

    • Author(s)
      Kosugi T, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] Beyond Rule-of-Five空間のAI分子設計2023

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] フラグメントリンキング法に基づくタンパク質分解誘導キメラ分子のリンカー設計2023

    • Author(s)
      石沢涼太、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] AlphaFold2を活用した分子設計2023

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] フラグメントリンキング法に基づくタンパク質分解誘導キメラ分子のリンカー設計2023

    • Author(s)
      石沢涼太、大上雅史
    • Organizer
      情報処理学会研究報告(バイオ情報学)
    • Data Source
      KAKENHI-PROJECT-23K28186
  • [Presentation] PROTAC molecular linker design using fragment linking method2023

    • Author(s)
      Ishizawa R, Ohue M
    • Organizer
      CBI学会2023年大会
    • Data Source
      KAKENHI-PLANNED-23H04887
  • [Presentation] Multiple Molecular Graph Representation Learning and Interpretation for Molecular Property/Activity Prediction in Drug Discovery2022

    • Author(s)
      Apakorn Kengkanna, 大上雅史
    • Organizer
      第6回Tokyo Bioinformatics Meeting
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] タンパク質間相互作用阻害剤設計のための分子生成手法の開発2022

    • Author(s)
      兒嶋佑季,小杉孝嗣,大上雅史
    • Organizer
      情報処理学会第84回全国大会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Investigation of AlphaFold2 predictive structure generation method suitable for structure-based virtual screening2022

    • Author(s)
      内河慶輔, 古井海里, 大上雅史
    • Organizer
      第6回Tokyo Bioinformatics Meeting
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Evaluation of Compound Virtual Screening Performance Using Learning-to-Rank in Diverse Experimental Scenarios2022

    • Author(s)
      Kairi Furui, Masahito Ohue
    • Organizer
      第11回生命医薬情報学連合大会(IIBMP2022)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Molecular Generation for Protein-Protein Interaction Inhibitor Design focusing on Physicochemical Properties2022

    • Author(s)
      Yuki Kojima, Takatsugu Kosugi, Masahito Ohue
    • Organizer
      第11回生命医薬情報学連合大会(IIBMP2022)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Drug-target affinity prediction using applicability domain considering the characteristics of the prediction model2022

    • Author(s)
      Shunya Sugita, Masahito Ohue
    • Organizer
      第11回生命医薬情報学連合大会(IIBMP2022)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] AI創薬・生命科学関連技術の進展とそれを支えるGPUソリューション2022

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2022年大会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] タンパク質間相互作用の理解と制御のための構造インフォマティクス2022

    • Author(s)
      大上雅史
    • Organizer
      第32回バイオメディカル研究会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Lead optimization through active learning using free energy perturbation2022

    • Author(s)
      Kairi Furui, Masahito Ohue
    • Organizer
      CBI学会2022年大会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] タンパク質の理解と制御のための構造インフォマティクス2022

    • Author(s)
      大上雅史
    • Organizer
      第65回日本腎臓学会学術総会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] タンパク質間相互作用を狙う創薬インフォマティクス2022

    • Author(s)
      大上雅史
    • Organizer
      筑波大学計算科学研究センター 計算メディカルサイエンスワークショップ2022
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] 適用領域を考慮した薬剤標的親和性予測2022

    • Author(s)
      杉田駿也, 大上雅史
    • Organizer
      情報処理学会研究報告 (SIGBIO)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] ランク学習を用いた化合物スクリーニングにおける多様なアッセイデータの統合戦略2022

    • Author(s)
      古井海里,大上雅史
    • Organizer
      情報処理学会第84回全国大会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] AI・計算科学が加速する生命科学2022

    • Author(s)
      大上雅史
    • Organizer
      日本農芸化学会 産学官若手交流会 第37回さんわかセミナー
    • Invited
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] AlphaFoldの計算創薬への応用と今後2022

    • Author(s)
      大上雅史
    • Organizer
      第434回CBI学会講演会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Solubility-Aware Protein Binding Peptide Design Using AlphaFold2022

    • Author(s)
      Takatsugu Kosugi, Masahito Ohue
    • Organizer
      第11回生命医薬情報学連合大会(IIBMP2022)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] 環状ペプチド複合体の構造データベース構築と相互作用解析2022

    • Author(s)
      冨樫慧乃辰, 大上雅史
    • Organizer
      第6回Tokyo Bioinformatics Meeting
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Molecular Generation for Protein-Protein Interaction Inhibitor Design focusing on Physicochemical Properties2022

    • Author(s)
      Yuki Kojima, Takatsugu Kosugi, Masahito Ohue
    • Organizer
      CBI学会2022年大会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] AIが加速する創薬・生命科学2022

    • Author(s)
      大上雅史
    • Organizer
      NVIDIA/湘南アイパーク共催 メンバーシップ入会記念オンラインセミナー 「NVIDIA AI Colloquim」
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] 自由エネルギー摂動法計算における化合物ネットワーク構造の効率化2021

    • Author(s)
      杉田駿也, 大上雅史
    • Organizer
      情報処理学会研究報告 (SIGMPS)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] タンパク質構造予測法AlphaFold2の可能性2021

    • Author(s)
      大上雅史
    • Organizer
      中分子創薬に関わる次世代産業研究会(IMD2) 第3回基礎講座
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] AlphaFold2の登場とオープンサイエンス2021

    • Author(s)
      大上雅史
    • Organizer
      第10回生命医薬情報学連合大会(IIBMP2021)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] 適用領域を考慮した薬剤標的親和性予測2021

    • Author(s)
      杉田駿也, 大上雅史
    • Organizer
      情報処理学会第83回全国大会, 4ZC-05
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Development of a Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions2021

    • Author(s)
      Takatsugu Kosugi, Masahito Ohue
    • Organizer
      第10回生命医薬情報学連合大会(IIBMP2021)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] TSUBAME 3.0 による Cresset Flare FEP 計算の展開2021

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2021年大会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Drug-Target Affinity Prediction using applicability domain of feature learning2021

    • Author(s)
      Shunya Sugita, Masahito Ohue
    • Organizer
      第10回生命医薬情報学連合大会(IIBMP2021)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Improvement of learning-to-rank for ligand-based virtual screening using gradient boosting technique with relevance refinement2021

    • Author(s)
      Kairi Furi, Masahito Ohue
    • Organizer
      第10回生命医薬情報学連合大会(IIBMP2021)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] 並列計算と機械学習による創薬支援インフォマティクス2021

    • Author(s)
      大上雅史
    • Organizer
      産総研AIRC 第51回AIセミナー「生命科学系データサイエンスの最前線」
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] マルチノード・マルチGPU上での網羅的なタンパク質間相互作用予測の高速化2020

    • Author(s)
      渡辺紘生, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 二次元分子記述子を用いた機械学習による環状ペプチドの細胞膜透過性予測2020

    • Author(s)
      村田翔太朗, 山田雄太, 吉川寧, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 共通な部分構造の再利用による高速なタンパク質リガンドドッキング手法の開発2020

    • Author(s)
      久保田陸人, 柳澤渓甫, 吉川寧, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] High-performance cloud computing for exhaustive protein-protein docking2020

    • Author(s)
      Masahito Ohue, Kento Aoyama, Yutaka Akiyama
    • Organizer
      IPSJ Technical Report, 2020-MPS-129(6)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] PKRank & SPDRank - Learning-to-rank methods for machine-learning-based drug discovery2020

    • Author(s)
      Ohue Masahito, Suzuki Shogo D., Akiyama Yutaka
    • Organizer
      Biophysical Society 64th Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] GBDTによる化合物の血液胎盤関門透過性予測2020

    • Author(s)
      大上雅史, 古井海里
    • Organizer
      情報処理学会研究報告, 2021-BIO-65(8)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] 並列計算を駆使したタンパク質間相互作用予測2020

    • Author(s)
      大上雅史
    • Organizer
      第43回日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Improved protein-protein docking using arbitrary docking-derived protein interface predictions2020

    • Author(s)
      Druyvesteyn Max, Ohue M,asahito Akiyama Yutaka
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Fragment Linking with DQN2020

    • Author(s)
      Inagaki Masaya, Ohue Masahito, Akiyama Yutaka
    • Organizer
      The 5th IITM-Tokyo Tech Joint Symposium-Current trends in Bioinformatics: Big data analysis, machine learning and drug design
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 薬のタネ探しを支援する計算技術2020

    • Author(s)
      大上雅史
    • Organizer
      LiHub創薬技術革新グループ ワークショップ 異分野融合による創薬研究
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Development of fragment linking method for beyond rule of five2020

    • Author(s)
      Tsushima Yuki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      The 5th IITM-Tokyo Tech Joint Symposium-Current trends in Bioinformatics: Big data analysis, machine learning and drug design
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 縮アミノ酸を利用した二段階のシード探索によるメタゲノム配列相同性検索の改良2020

    • Author(s)
      高畠和輝, 伊澤和輝, 秋川元宏, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Supercomputing-based exhaustive protein-protein interaction prediction with MEGADOCK2020

    • Author(s)
      Ohue Masahito
    • Organizer
      The 5th IITM-Tokyo Tech Joint Symposium-Current trends in Bioinformatics: Big data analysis, machine learning and drug design
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 薬のタネを探すインフォマティクス技術2020

    • Author(s)
      大上雅史
    • Organizer
      生物工学フォーラム「情報解析が切り拓く創薬・生物工学研究の新展開」
    • Invited
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Improved protein-protein docking using arbitrary docking-derived protein interface predictions2020

    • Author(s)
      Max Druyvesteyn, Masahito Ohue, Yutaka Akiyama
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Multiple HPC Environments-Aware Container Image Configuration Workflow for Large-Scale All-to-All Protein-Protein Docking Calculations2020

    • Author(s)
      Kento Aoyama, Hiroki Watanabe, Masahito Ohue, Yutaka Akiyama
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Development of Membrane Permeability Prediction System for Cyclic Peptide: Large-Scale Molecular Dynamics Simulations2020

    • Author(s)
      Sugiyama Satoshi, Yoshikawa Yasushi, Ohue Masahito, Akiyama Yutaka
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] マルチノード・マルチGPU上での網羅的なタンパク質間相互作用予測の高速化2020

    • Author(s)
      渡辺紘生, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] 超並列計算と機械学習による創薬支援インフォマティクス2020

    • Author(s)
      大上雅史
    • Organizer
      第418回CBI学会講演会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Prediction of plasma protein binding for cyclic peptides by deep learning and molecular docking2020

    • Author(s)
      Li Jianan, Yoshikawa Yasushi, Ohue Masahito, Akiyama Yutaka
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Multidomain protein structure prediction using information about residues interacting on multimeric protein interfaces2020

    • Author(s)
      Matsuno Shumpei, Ohue Masahito, Akiyama Yutaka
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Multiple HPC Environments-Aware Container Image Configuration Workflow for Large-Scale All-to-All Protein-Protein Docking Calculations2020

    • Author(s)
      Aoyama Kento, Watanabe Hiroki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 創薬・生命科学研究を加速するインフォマティクス技術2020

    • Author(s)
      大上雅史
    • Organizer
      第1回 先端生物物理学セミナー
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Exhaustive protein-protein interaction prediction using MEGADOCK on a large-scale HPC environment2020

    • Author(s)
      Watanabe Hiroki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Exhaustive protein-protein interaction prediction using MEGADOCK on a large-scale HPC environment2020

    • Author(s)
      Hiroki Watanabe, Masahito Ohue, Yutaka Akiyama
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] インシリコ創薬を支える最先端情報科学2020

    • Author(s)
      大上雅史, 山本一樹
    • Organizer
      第43回日本分子生物学会年会 フォーラム2F-11
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] Supercomputing-based exhaustive protein-protein interaction prediction with MEGADOCK2020

    • Author(s)
      Masahito Ohue
    • Organizer
      The 5th IITM-Tokyo Tech Joint Symposium-Current trends in bioinformatics: Big data analysis, machine learning and drug design
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] 自由エネルギー計算を利用した薬剤標的相互作用予測手法の検討2020

    • Author(s)
      杉田駿也, 大上雅史
    • Organizer
      第9回生命医薬情報学連合大会(IIBMP2020)
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] PKRank & SPDRank - Learning-to-rank methods for machine-learning-based drug discovery2020

    • Author(s)
      Masahito Ohue, Shogo D. Suzuki, Yutaka Akiyama
    • Organizer
      Biophysical Society 64th Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Multidomain protein structure prediction using information about residues interacting on multimeric protein interfaces2020

    • Author(s)
      Shunpei Matsuno, Masahito Ohue, Yutaka Akiyama
    • Organizer
      2nd RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] GPUスパコンによる細胞スケールのタンパク質間相互作用予測2020

    • Author(s)
      大上雅史, 青山建人, 秋山泰
    • Organizer
      生命情報科学若手の会第12回研究会
    • Data Source
      KAKENHI-PROJECT-20H04280
  • [Presentation] 薬のタネ探しを支援する計算技術2020

    • Author(s)
      大上雅史
    • Organizer
      LiHub創薬技術革新グループ ワークショップ 異分野融合による創薬研究
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] マルチドメインタンパク質の相互作用残基ペア予測を用いた立体構造予測手法の改良2019

    • Author(s)
      松野駿平, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] PKRank & SPDRank 化合物選別のためのランク学習法2019

    • Author(s)
      大上雅史, 鈴木翔吾, 秋山泰
    • Organizer
      生命情報科学若手の会第11回研究会
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Accelerating MEGADOCK: protein-protein interaction prediction software on multiple nodes and multiple GPUs environment2019

    • Author(s)
      Hiroki Watanabe, Masahito Ohue, Yutaka Akiyama
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Multiple HPC Environments-Aware Container Image Configuration for Bioinformatics Application2019

    • Author(s)
      Aoyama Kento, Watanabe Hiroki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      International Conference for High Performance Computing, Networking, Storage, and Analysis (SC'19)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] PKRank & SPDRank 化合物選別のためのランク学習法2019

    • Author(s)
      大上雅史, 鈴木翔吾, 秋山泰
    • Organizer
      生命情報科学若手の会第11回研究会
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Performance evaluation of MEGADOCK protein-protein interaction prediction system implemented with distributed containers on a cloud computing environment2019

    • Author(s)
      Kento Aoyama, Yuki Yamamoto, Masahito Ohue, Yutaka Akiyama
    • Organizer
      IPSJ Technical Report SIGMPS
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Multidomain protein structure prediction using multimeric interaction residue pair information2019

    • Author(s)
      Shumpei Matsuno, Masahito Ohue, Yutaka Akiyama
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] 薬のタネを探すインフォマティクス技術2019

    • Author(s)
      大上雅史
    • Organizer
      第42回日本分子生物学会年会, [1F-06]フォーラム 薬効評価・予測技術の進歩による創薬研究の加速
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Performance evaluation of MEGADOCK protein-protein interaction prediction system implemented with distributed containers on a cloud computing environment2019

    • Author(s)
      Aoyama Kento, Yamamoto Yuki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      IPSJ Technical Report
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Performance evaluation of MEGADOCK protein?proteininteraction prediction system implemented with distributedcontainers on a cloud computing environment2019

    • Author(s)
      Aoyama Kento, Yamamoto Yuki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      Parallel and Distributed Processing Techniques and Applications (PDPTA'19)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] PKRank & SPDRank: Learning-to-rank methods for ligand-based virtual screening2019

    • Author(s)
      Masahito Ohue, Shogo D. Suzuki, Yutaka Akiyama
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] 機械学習を用いた環状ペプチドの膜透過性予測手法の開発2019

    • Author(s)
      山田 雄太, 吉川 寧, 和久井 直樹, 大上 雅史, 秋山 泰
    • Organizer
      情報処理学会研究報告 第57回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Multiple HPC Environments-Aware Container Image Configuration for Bioinformatics Application2019

    • Author(s)
      Aoyama Kento, Watanabe Hiroki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Accelerating MEGADOCK: protein-protein interaction prediction software on multiple nodes and multiple GPUs environment2019

    • Author(s)
      Watanabe Hiroki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Learning-to-rank for ligand-based virtual screening2019

    • Author(s)
      Masahito Ohue
    • Organizer
      AHeDD2019/IPAB2019 Joint Symposium
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Learning-to-rank for ligand-based virtual screening2019

    • Author(s)
      Ohue Masahito
    • Organizer
      AHeDD2019/IPAB2019 Joint Symposium
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Parallelized pipeline for whole genome shotgun metagenomics with GHOSTZ-GPU and MEGAN2019

    • Author(s)
      Masahito Ohue,Marina Yamasawa,Kazuki Izawa,Yutaka Akiyama
    • Organizer
      In Proceedings of the 19th annual IEEE International Conference on Bioinformatics and Bioengineering (IEEE BIBE 2019)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 拡張サンプリング法による環状ペプチドの膜透過性予測システムの開発2019

    • Author(s)
      黄毅聰, 吉川寧, 和久井直樹, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 第57回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 機械学習を用いた環状ペプチドの体内安定性予測手法の改良2019

    • Author(s)
      李佳男,吉川寧,大上雅史,秋山泰.
    • Organizer
      情報処理学会研究報告 バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Megadock-Web: an integrated database of high-throughput structure-based proteinprotein interaction predictions.2019

    • Author(s)
      Ohue, Masahito, Hayashi Takanori, Matsuzaki Yuri, Yanagisawa Keisuke, Akiyama Yutaka
    • Organizer
      Biophysical Society 63rd Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] マルチドメインタンパク質の相互作用残基ペア予測を用いた立体構造予測手法の改良2019

    • Author(s)
      松野駿平,大上雅史,秋山泰.
    • Organizer
      情報処理学会研究報告 バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Development of Membrane Permeability Prediction Method for Cyclic Peptids with Machine Learning2019

    • Author(s)
      Yamada Yutaka, Yoshikawa Yasushi, Wakui Naoki, Ohue Masahito, Akiyama Yutaka
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Multidomain protein structure prediction using multimeric interaction residue pair information2019

    • Author(s)
      Matsuno Shumpei, Ohue Masahito, Akiyama Yutaka
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 分子グラフ上の距離を考慮したグラフ畳込みニューラルネットワークによる化合物活性予測2019

    • Author(s)
      伊井良太, 柳澤渓甫, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 第57回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Multiple HPC Environments-Aware Container Image Configuration for Bioinformatics Application2019

    • Author(s)
      Kento Aoyama, Hiroki Watanabe, Masahito Ohue, Yutaka Akiyama
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Acceleration and virtualization of parallel protein-protein interaction prediction system MEGADOCK2019

    • Author(s)
      Masahito Ohue, Hiroki Watanabe, Kento Aoyama, Yutaka Akiyama
    • Organizer
      The 57th Annual Meeting of the Biophysical Society of Japan
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Acceleration and virtualization of parallel protein-protein interaction prediction system MEGADOCK2019

    • Author(s)
      Ohue Masahito, Watanabe Hiroki, Aoyama Kento, Akiyama Yutaka
    • Organizer
      The 57th Annual Meeting of the Biophysical Society of Japan
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 薬のタネを探すインフォマティクス技術2019

    • Author(s)
      大上雅史
    • Organizer
      第42回日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Multiple HPC Environments-Aware Container Image Configuration for Bioinformatics Application2019

    • Author(s)
      Kento Aoyama, Hiroki Watanabe, Masahito Ohue, Yutaka Akiyama
    • Organizer
      International Conference for High Performance Computing, Networking, Storage, and Analysis (SC'19)
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] バイオデ―タと戦う情報学2019

    • Author(s)
      大上雅史
    • Organizer
      情報学の次世代検討会Ⅰ
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] バイオデ―タと戦う情報学2019

    • Author(s)
      大上雅史
    • Organizer
      情報学の次世代検討会Ⅰ
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Molecular activity prediction using graph convolutional deep neural network considering distance on a molecular graph2019

    • Author(s)
      Ohue Masahito, Ii Ryota, Yanagisawa Keisuke, Akiyama Yutaka
    • Organizer
      IPSJ Technical Report
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Molecular activity prediction using graph convolutional deep neural network considering distance on a molecular graph2019

    • Author(s)
      Ohue Masahito, Ii Ryota, Yanagisawa Keisuke, Akiyama Yutaka
    • Organizer
      Parallel and Distributed Processing Techniques and Applications (PDPTA'19)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] PKRank & SPDRank: Learning-to-rank methods for ligand-based virtual screening2019

    • Author(s)
      Ohue Masahito, Suzuki Shogo D., Akiyama Yutaka
    • Organizer
      第8回生命医薬情報学連合大会 (IIBMP2019)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] A playful tool for predicting protein-protein docking2019

    • Author(s)
      Keren Jiang,Di Zhang,Tsubasa Iino,Risa Kimura,Tatsuo Nakajima,Kana Shimizu,Masahito Ohue,Yutaka Akiyama.
    • Organizer
      Mobile and Ubiquitous Multimedia (MUM 2019)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] MEGADOCK-Web: An Integrated Database of High-Throughput Structure-Based Protein-Protein Interaction Predictions2019

    • Author(s)
      Masahito Ohue, Takanori Hayashi, Yuri Matsuzaki, Keisuke Yanagisawa, Yutaka Akiyama
    • Organizer
      Biophysical Society 63rd Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] 代表タンパク質構造群との構造アラインメントスコアプロファイルに基づくタンパク質間相互作用予測の高速化2019

    • Author(s)
      林 孝紀, 大上 雅史, 秋山 泰
    • Organizer
      情報処理学会研究報告 第57回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] MEGADOCK-Web-Mito: a database of computer-predicted mitochondrial protein-protein interactions2018

    • Author(s)
      Watanabe Hiroki, Hayashi Takanori, Ohue Masahito, Akiyama Yutaka
    • Organizer
      1st RWBC-OIL Workshop, Tokyo Institute of Technology
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Efficient Hyperparameter Optimization by Using GP-MI Bayesian Optimization Algorithm for Predicting Drug-Target Interactions2018

    • Author(s)
      Ban Tomohiro, Ohue Masahito, Akiyama Yutaka
    • Organizer
      1st RWBC-OIL Workshop, Tokyo Institute of Technology
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 生命情報解析分野におけるコンテナ型仮想化技術の動向と性能検証2018

    • Author(s)
      青山建人, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 第54回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Prediction of Protein-Protein Interactions with MEGADOCK: Parallelization, Application, and Open Database2018

    • Author(s)
      Masahito Ohue
    • Organizer
      Asia Hub e-Drug Discovery Symposium (AHeDD2018)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] MEGADOCK: a supercomputing bioinformatics application for protein-protein interaction prediction2018

    • Author(s)
      Masahito Ohue
    • Organizer
      1st RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Performance Improvements of PPI Prediction Software by Tuning GPU Device Allocation on Multi-GPU Environments2018

    • Author(s)
      Aoyama Kento, Ohue Masahito, Akiyama Yutaka
    • Organizer
      第7回生命医薬情報学連合大会(IIBMP2018)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Development of efficient protein-ligand docking method for virtual screening by reuse of fragments2018

    • Author(s)
      Kubota Rikuto, Yanagisawa Keisuke, Ohue Masahito, Akiyama Yutaka
    • Organizer
      1st RWBC-OIL Workshop, Tokyo Institute of Technology
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Prediction of Protein-Protein Interactions with MEGADOCK: Parallelization, Application, and Open Database2018

    • Author(s)
      Ohue Masahito
    • Organizer
      Asia Hub e-Drug Discovery Symposium (AHeDD2018), Korean Institute of Science and Technology Gangneung
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] MEGADOCK: a supercomputing bioinformatics application for protein-protein interaction prediction2018

    • Author(s)
      Ohue Masahito
    • Organizer
      1st RWBC-OIL Workshop, Tokyo Institute of Technology
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] High Performance Computing Drug Discovery - Toward Targeting Protein-Protein Interactions2018

    • Author(s)
      Masahito Ohue
    • Organizer
      Advances in Neuroinformatics 2018 (AINI2018)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] 共通な部分構造の再利用アルゴリズムを用いたタンパク質リガンドドッキング手法の開発2018

    • Author(s)
      久保田陸人, 柳澤渓甫, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 第54回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] High performance computing drug discovery - Toward Targeting Protein-Protein Interactions2018

    • Author(s)
      Ohue Masahito
    • Organizer
      6th INCF Japan Node International Workshop Advances in Neuroinformatics (AINI2018), Okochi Hall, Riken, Japan
    • Invited
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] MEGADOCK-Web-Mito: a database of computer-predicted mitochondrial protein-protein interactions2018

    • Author(s)
      Hiroki Watanabe, Takanori Hayashi, Masahito Ohue, Yutaka Akiyama
    • Organizer
      1st RWBC-OIL Workshop
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Supercomputing-based exhaustive protein-protein interaction prediction and its open database2018

    • Author(s)
      Ohue Masahito
    • Organizer
      The 56th Annual Meeting of the Biophysical Society of Japan
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] ミトコンドリアに関連したヒトタンパク質間相互作用予測データベースMEGADOCK-Web-Mitoの開発2018

    • Author(s)
      渡辺紘生, 林孝紀, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 第54回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 新しい創薬標的の探索を支えるインフォマティクス技術2018

    • Author(s)
      大上雅史
    • Organizer
      第41回日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] 新しい創薬標的の探索を支えるインフォマティクス技術2018

    • Author(s)
      大上 雅史
    • Organizer
      第41回日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] MEGADOCK-Web: An Integrated Database of High-Throughput Structure-Based Protein-Protein Interaction Predictions2018

    • Author(s)
      Masahito Ohue, Hayashi Takanori, Matsuzaki Yuri, Yanagisawa Keisuke, Akiyama Yutaka
    • Organizer
      Biophysical Society 63rd Annual Meeting, Baltimore, MD, USA
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 代表タンパク質構造群とのアラインメントを用いた高速なタンパク質間相互作用予測2018

    • Author(s)
      林 孝紀, 大上 雅史, 秋山 泰
    • Organizer
      第7回生命医薬情報学連合大会(IIBMP2018)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 複数のLasso回帰解に基づく解釈性の良い予測モデルを目指した環状ペプチド医薬品の体内安定性予測2018

    • Author(s)
      多治見隆志, 和久井直樹, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 第54回バイオ情報学(BIO)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 出会い系タンパク質を探す旅2018

    • Author(s)
      大上雅史
    • Organizer
      情報処理学会第80回全国大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Feature extraction by enumerating lasso solutions for predicting plasma protein binding of peptide2018

    • Author(s)
      Takashi Tajimi, Naoki Wakui, Masahito Ohue Yutaka Akiyama
    • Organizer
      The Sixteenth Asia Pacific Bioinformatics Conference (APBC2018)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] ミトコンドリアに関連したヒトタンパク質間相互作用予測データベースMEGADOCK-Web-Mitoの開発2018

    • Author(s)
      渡辺紘生, 林孝紀, 大上雅史, 秋山泰
    • Organizer
      情報処理学会研究報告 バイオ情報学
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Feature extraction by enumerating lasso solutions for predicting plasma protein binding of peptide2018

    • Author(s)
      Takashi Tajimi, Naoki Wakui, Masahito Ohue, Yutaka Akiyama
    • Organizer
      The Sixteenth Asia Pacific Bioinformatics Conference (APBC2018)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Supercomputing-based exhaustive protein-protein interaction prediction and its open database2018

    • Author(s)
      Masahito Ohue
    • Organizer
      The 56th Annual Meeting of the Biophysical Society of Japan
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] Comparison of the HPC Container Technologies for Bioinformatics Application2018

    • Author(s)
      Aoyama Kento, Ohue Masahito, Akiyama Yutaka
    • Organizer
      1st RWBC-OIL Workshop, Tokyo Institute of Technology
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 大域的化合物特徴を表現するグラフ畳込みニューラルネットワーク2018

    • Author(s)
      伊井良太, 柳澤渓甫, 大上雅史, 秋山泰
    • Organizer
      第7回生命医薬情報学連合大会(IIBMP2018)
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] MEGADOCK-Web: タンパク質間相互作用予測の計算結果を収録したデータベースとWebインターフェース2018

    • Author(s)
      大上雅史
    • Organizer
      第22回オープンバイオ研究会
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Toward efficient protein-ligand docking for virtual screening by reuse of fragments2018

    • Author(s)
      Rikuto Kubota, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
    • Organizer
      The Sixteenth Asia Pacific Bioinformatics Conference (APBC2018)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] タンパク質複合体構造モデリングの評価のためのベンチマークデータセット2018

    • Author(s)
      林孝紀, 大上雅史, Juliette Martin, Guillaume Launay, 松崎由理, 内古閑伸之, 秋山泰
    • Organizer
      第56回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-18K18149
  • [Presentation] タンパク質分子の柔軟性を考慮した新規ドッキングゲーム2018

    • Author(s)
      飯野翼, 大上雅史, 秋山泰, 清水佳奈
    • Organizer
      情報処理学会第80回全国大会
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] クラウド上の分散GPU環境におけるタンパク質間相互作用予測計算フレームワークの開発2018

    • Author(s)
      山本 悠生, 大上 雅史, 秋山 泰
    • Organizer
      情報処理学会第53回バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Link Mining for Kernel-based Compound-Protein Interaction Predictions Using a Chemogenomics Approach2017

    • Author(s)
      Ohue M, Yamazaki T, Ban T, Akiyama Y.
    • Organizer
      Intelligent Computing Theories and Application (In Proceedings of ICIC2017, Lecture Notes in Computer Science)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] 目バーチャルスクリーニング2017

    • Author(s)
      大上雅史
    • Organizer
      第21回オープンバイオ研究会
    • Place of Presentation
      北陸先端科学技術大学院大学
    • Year and Date
      2017-03-25
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Interaction Surfaces of Proteins Involved in Bacterial-Chemotaxis with Rigid-Body Docking Decoys2017

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      Biophysical Society 61st Annual Meeting
    • Place of Presentation
      Ernest N. Morial Convention Center, New Orleans, LA, USA
    • Year and Date
      2017-02-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] タンパク質間相互作用予測統合データベースMEGADOCK-WEBの改良とクラウド計算環境との連携2017

    • Author(s)
      林孝紀, 山本悠生, 松崎由理, 大上雅史, 秋山泰
    • Organizer
      情報処理学会第50回バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] 標的タンパク質の立体構造を用いたリガンド候補化合物の上限サイズの推定による化合物フィルタリング2017

    • Author(s)
      柳澤渓甫,大上雅史,石田貴士, 秋山泰
    • Organizer
      情報処理学会第49回バイオ情報学研究会
    • Place of Presentation
      北陸先端科学技術大学院大学、能美市、石川県
    • Year and Date
      2017-03-23
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] コンテナ型仮想化による分散計算環境におけるタンパク質間相互作用予測システムの性能評価2017

    • Author(s)
      青山建人, 山本悠生,大上雅史,秋山泰
    • Organizer
      情報処理学会第49回バイオ情報学研究会
    • Place of Presentation
      北陸先端科学技術大学院大学、能美市、石川県
    • Year and Date
      2017-03-23
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Learning-to-rank based compound virtual screening by using pairwise kernel with multiple heterogeneous experimental data2017

    • Author(s)
      Suzuki SD, Ohue M, Akiyama Y.
    • Organizer
      In Proceedings of The 22nd International Symposium on Artificial Life and Robotics (AROB 2017)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Microsoft Azure上でのタンパク質間相互作用予測システムの並列計算と性能評価2017

    • Author(s)
      大上雅史,山本悠生,秋山泰
    • Organizer
      情報処理学会第49回バイオ情報学研究会
    • Place of Presentation
      北陸先端科学技術大学院大学、能美市、石川県
    • Year and Date
      2017-03-23
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] タンパク質間相互作用の網羅的予測結果の公開2017

    • Author(s)
      大上雅史
    • Organizer
      BioJapan2017
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] Efficient Hyperparameter Optimization by Using Bayesian Optimization for Drug-Target Interaction Prediction2017

    • Author(s)
      Ban T, Ohue M, Akiyama Y.
    • Organizer
      In Proceedings of the 7th IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS 2017)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17H01814
  • [Presentation] MEGADOCK-Azure: high-performance protein-protein docking on Microsoft Azure HPC2017

    • Author(s)
      Masahito Ohue, Yuki Yamamoto, Kento Aoyama, Yutaka Akiyama
    • Organizer
      4th IIT Madras-Tokyo Tech Joint Symposium on Frontiers in Bioinformatics: Large Scale Data Analysis, Resources and Drug Design
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Learning-to-rank based compound virtual screening by using pairwise kernel with multiple heterogeneous experimental data2017

    • Author(s)
      Shogo D. Suzuki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      22nd International Symposium on Artificial Life and Robotics (AROB 22nd 2017)
    • Place of Presentation
      B-con Plaza, Beppu, Oita, Japan
    • Year and Date
      2017-01-19
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Interaction Surfaces of Proteins Involved in Bacterial Chemotaxis with Rigid-Body Docking Decoys2017

    • Author(s)
      Uchikoga, N., Matsuzaki, Y., Ohue, M., and Akiyama, Y.
    • Organizer
      Biophysical Society 61th annual meeting
    • Place of Presentation
      New Orleans, USA
    • Year and Date
      2017-02-11
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] Exploring the selectivity of inhibitor complexes with Bcl-2 and Bcl-XL: a molecular dynamics simiulation approach2017

    • Author(s)
      Naoki Wakui, Ryunosuke Yoshino, Nobuaki Yasuo, Masahito Ohue, Masakazu Sekijima
    • Organizer
      4th IIT Madras-Tokyo Tech Joint Symposium on Frontiers in Bioinformatics: Large Scale Data Analysis, Resources and Drug Design
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] MEGADOCK-Web: an integrated database of high-throughput structure-based protein-protein interaction predictions2017

    • Author(s)
      Masahito Ohue, Takanori Hayashi, Keisuke Yanagisawa, Yuri Matsuzaki, Yutaka Akiyama
    • Organizer
      Informatics in Biology, Medicine and Pharmacology 2017 (IIBMP2017)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Cloud Computing for All-to-All Protein-Protein Docking on Azure HPC'2017

    • Author(s)
      Masahito Ohue, Yuki Yamamoto, Takanori Hayashi, Yuri Matsuzaki, Yutaka Akiyam
    • Organizer
      Biophysical Society 61st Annual Meeting
    • Place of Presentation
      Ernest N. Morial Convention Center, New Orleans, LA, USA
    • Year and Date
      2017-02-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Prediction of Protein-Protein Interactions with MEGADOCK: Parallelization, Application, and Open Database2017

    • Author(s)
      Masahito Ohue
    • Organizer
      4th IIT Madras-Tokyo Tech Joint Symposium on Frontiers in Bioinformatics: Large Scale Data Analysis, Resources and Drug Design
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Analysis of Protein interaction surfaces using a profile method with rigid-body docking decoys.2017

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      The 25th Conferance of ISMB/ The 16th ECCB
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] Protein interaction surfaces of protein-protein interaction networks in bacterial chemotaxis networks using profile methods2017

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      The 55th Annual Meeting of the Biophysical Society of Japan
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] フラグメント伸長型化合物ドッキング計算のための重み付きオフラインキャッシュ問題の厳密解アルゴリズム2017

    • Author(s)
      柳澤渓甫, 小峰駿汰, 久保田陸人, 大上雅史, 秋山泰
    • Organizer
      情報処理学会第50回バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] MEGADOCK 4.0: an ultra-high-performance protein-protein docking software for heterogeneous supercomputers2016

    • Author(s)
      Masahito Ohue, Yuri Matsuzaki, Nobuyuki Uchikoga, Takashi Ishida, Yutaka Akiyama
    • Organizer
      Biophysical Society 60th Annual Meeting
    • Place of Presentation
      ロサンゼルスコンベンションセンター,カリフォルニア州,アメリカ
    • Year and Date
      2016-03-01
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] GPU/MPI Parallelization of Metagenomic Sequence Homology Search Tool and Its Application to Oral Metagenomics2016

    • Author(s)
      Marina Yamasawa, Tomoya Fujii, Kota Goto, Masahito Ohue, Takashi Ishida, Kazuyuki Ishihara, Yutaka Akiyama
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] MEGADOCK-Azure: High-performance protein-protein interaction prediction system on Microsoft Azure HPC2016

    • Author(s)
      Masahito Ohue, Yuki Yamamoto, Hiroyuki Sato, Takashi Matsushita, Yutaka Akiyama
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] フラグメント分割に基づく超高速化合物プレスクリーニング手法 ESPRESSO2016

    • Author(s)
      柳澤渓甫,小峰駿汰,鈴木翔吾,大上雅史,石田貴士,秋山泰
    • Organizer
      情報処理学会第46回バイオ情報学研究会
    • Place of Presentation
      沖縄科学技術大学院大学、恩納村、沖縄県
    • Year and Date
      2016-07-05
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] タンパク質間相互作用予測結果データベースと表示系の構築2016

    • Author(s)
      長澤一輝,松崎由理,大上雅史,秋山泰
    • Organizer
      情報処理学会第45回バイオ情報学研究会
    • Place of Presentation
      北陸先端科学技術大学院大学,能美市,石川県
    • Year and Date
      2016-03-18
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] ESPRESSO: An ultrafast compound pre-screening method based on compound decomposition2016

    • Author(s)
      Keisuke Yanagisawa, Shunta Komine, Shogo D. Suzuki, Masahito Ohue, Takashi Ishida, Yutaka Akiyama
    • Organizer
      The 27th International Conference on Genome Informatics (GIW2016)
    • Place of Presentation
      Fudan Universitym Shanghai, China
    • Year and Date
      2016-10-04
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Analysis of Physico-Chemical Properties of Protein Docking Decoys Generated by Rigid-Body Docking2016

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      Biophysical Society 60th Annual Meeting
    • Place of Presentation
      ロサンゼルスコンベンションセンター,カリフォルニア州,アメリカ
    • Year and Date
      2016-03-01
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] Learning to Rank with Ignoring Meaningless Order and Its Application to Virtual Screening for Drug Discovery2016

    • Author(s)
      Shogo D. Suzuki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] 構造情報に基づくタンパク質間相互作用予測システムMEGADOCK2016

    • Author(s)
      大上雅史
    • Organizer
      CBI学会2016年大会, FS-07 バイオインフォマティクスとその医学応用・第4回 オミックス解析における実務者意見交換会
    • Place of Presentation
      タワーホール船堀、江戸川区、東京都
    • Year and Date
      2016-10-27
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] MEGADOCK-WEB: a database of predicted protein-protein interactions and its web interface2016

    • Author(s)
      Takanori Hayashi, Kazuki Nagasawa, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] 計算で明らかにするタンパク質の出会いとネットワーク2016

    • Author(s)
      大上雅史
    • Organizer
      FIT2016 第15回情報科学技術フォーラム
    • Place of Presentation
      富山大学五福キャンパス、富山市、富山県
    • Year and Date
      2016-09-09
    • Invited
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Human insight in drug discovery: docking pose selection in protein-ligand docking and hit-compounds selection in structure-based virtual screening2016

    • Author(s)
      Kazuki Yamamoto, Yoshitaka Moriwaki, Keita Oda, Masahito Ohue, Itsuo Nakane, Ryunosuke Yoshino, Hayase Hakariya, Tadaaki Mashimo, Mitsuhito Wada, Yoshifumi Fukunishi
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] タンパク質間相互作用予測結果データベースと表示系の構築2016

    • Author(s)
      長澤一輝,松崎由理,大上雅史,秋山泰
    • Organizer
      情報処理学会第45回バイオ情報学研究会
    • Place of Presentation
      北陸先端科学技術大学院大学,能美市,石川県
    • Year and Date
      2016-03-18
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] 薬のタネ発見のための計算技術と創薬知BoF2016

    • Author(s)
      大上雅史
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Accelerating SHAKE Calculation of myPresto/omegagene Molecular Dynamics Simulation on CPU/GPU heterogeneous environment2016

    • Author(s)
      Kota Goto, Kota Kasahara, Masahito Ohue, Haruki Nakamura, Yutaka Akiyama
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] ESPRESSO: An ultrafast compound pre-screening method based on compound segmentation2016

    • Author(s)
      Keisuke Yanagisawa, Shunta Komine, Shogo D. Suzuki, Masahito Ohue, Takashi Ishida, Yutaka Akiyama
    • Organizer
      第5回生命医薬情報学連合大会(IIBMP2016)
    • Place of Presentation
      プラザ平成、江東区、東京都
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] MEGADOCK 4.0: an ultra-high-performance protein-protein docking software for heterogeneous supercomputers2016

    • Author(s)
      Masahito Ohue, Yuri Matsuzaki, Nobuyuki Uchikoga, Takashi Ishida, Yutaka Akiyama
    • Organizer
      Biophysical Society 60th Annual Meeting
    • Place of Presentation
      ロサンゼルスコンベンションセンター,カリフォルニア州,アメリカ
    • Year and Date
      2016-03-01
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] 活性値情報のグループ化とランク学習による化合物スクリーニング2016

    • Author(s)
      鈴木翔吾,大上雅史,秋山泰
    • Organizer
      情報処理学会第46回バイオ情報学研究会
    • Place of Presentation
      沖縄科学技術大学院大学、恩納村、沖縄県
    • Year and Date
      2016-07-05
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] A rescoring method of protein-peptide docking prediction with amino acid profiles of rigid-body search results2016

    • Author(s)
      Masahito Ohue, Yutaka Akiyama
    • Organizer
      The Fourteenth Asia Pacific Bioinformatics Conference (APBC2016)
    • Place of Presentation
      South San Francisco Conference Center, Sanfrancisco Bay Area, CA, USA
    • Year and Date
      2016-01-12
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] 細菌走化性におけるタンパク質間相互作用面の解析2016

    • Author(s)
      内古閑伸之,松崎由理,大上雅史, 秋山泰
    • Organizer
      第16回日本蛋白質科学会年会
    • Place of Presentation
      福岡国際会議場、福岡県
    • Year and Date
      2016-06-08
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] SHAKE法に着目した分子動力学ソフトウェアmyPresto/OmegageneのCPU・GPU混在環境における高速化2016

    • Author(s)
      後藤公太,笠原浩太,大上雅史,中村春木,秋山泰
    • Organizer
      情報処理学会第46回バイオ情報学研究会
    • Place of Presentation
      沖縄科学技術大学院大学、恩納村、沖縄県
    • Year and Date
      2016-07-05
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Analysis of Physico-Chemical Properties of Protein Docking Decoys Generated by Rigid-Body Docking2016

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      Biophysical Society 60th Annual Meeting
    • Place of Presentation
      ロサンゼルスコンベンションセンター,カリフォルニア州,アメリカ
    • Year and Date
      2016-03-01
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Human insight in drug discovery: docking pose selection in protein-ligand docking and hit-compounds selection in structure-based virtual screening2016

    • Author(s)
      Kazuki Yamamoto, Yoshitaka Moriwaki, Keita Oda, Masahito Ohue, Itsuo Nakane, Ryunosuke Yoshino, Hayase Hakariya, Tadaaki Mashimo, Mitsuhito Wada, Yoshifumi Fukunishi
    • Organizer
      CBI学会2016年大会
    • Place of Presentation
      タワーホール船堀、江戸川区、東京都
    • Year and Date
      2016-10-26
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] MEGADOCK: A high-performance protein-protein interaction prediction software for petascale supercomputing environments2015

    • Author(s)
      Yuri Matsuzaki, Masahito Ohue, Nobuyuki Uchikoga, Takashi Ishida, Yutaka Akiyama
    • Organizer
      3rd IIT Madras-Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics
    • Place of Presentation
      インド工科大学マドラス校,チェンナイ,インド
    • Year and Date
      2015-11-05
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] タンパク質間相互作用予測システムMEGADOCKによるEGFRパスウェイ解析2015

    • Author(s)
      大上雅史,松崎由理,石田貴士,秋山泰
    • Organizer
      第21回創剤フォーラム若手研究会
    • Place of Presentation
      東京大学本郷キャンパス, 文京区,東京都
    • Year and Date
      2015-11-28
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] MEGADOCK: A high-performance protein-protein interaction prediction software for petascale super-computing environments2015

    • Author(s)
      Yuri Matsuzaki, Nobuyuki Uchikoga, Masahito Ohue, Takashi Ishida, Yutaka Akiyama
    • Organizer
      Supercomputational Life Science 2015 (SCLS2015)
    • Place of Presentation
      東京大学,文京区,東京都
    • Year and Date
      2015-10-21
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] 剛体アンサンブルドッキングによって得られた候補構造群における相互作用残基ペアの特徴の解析2015

    • Author(s)
      内古閑伸之,松崎由理,大上雅史, 秋山泰
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学,金沢市,石川県
    • Year and Date
      2015-09-14
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] MEGADOCK: A high-performance protein-protein interaction prediction software for petascale supercomputing environments2015

    • Author(s)
      Yuri Matsuzaki, Masahito Ohue, Nobuyuki Uchikoga, Takashi Ishida, Yutaka Akiyama
    • Organizer
      3rd IIT Madras - Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics
    • Place of Presentation
      インド工科大学マドラス校,チェンナイ,インド
    • Year and Date
      2015-11-05
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] 剛体アンサンブルドッキングによって得られた候補構造群における相互作用残基ペアの特徴の解析2015

    • Author(s)
      内古閑伸之,松崎由理,大上雅史, 秋山泰
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学,金沢市,石川県
    • Year and Date
      2015-09-14
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] 大規模タンパク質間相互作用予測によるEGFR系解析2015

    • Author(s)
      大上雅史
    • Organizer
      第4回育志賞研究発表会
    • Place of Presentation
      京都大学,京都市,京都府
    • Year and Date
      2015-08-31
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] MEGADOCK: A high-performance protein-protein interaction prediction software for petascale super-computing environments.2015

    • Author(s)
      Yuri Matsuzaki, Nobuyuki Uchikoga, Masahito Ohue, Takashi Ishida, Yutaka Akiyama
    • Organizer
      Supercomputational Life Science 2015 (SCLS2015)
    • Place of Presentation
      東京大学,文京区,東京都
    • Year and Date
      2015-10-21
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] タンパク質間相互作用残基の物理化学的性質による単純化プロファイルを用いたポストドッキング解析2015

    • Author(s)
      大上雅史,内古閑伸之,松崎由理,秋山泰
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール,徳島市,徳島県
    • Year and Date
      2015-06-24
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] アミノ酸プロファイルによるタンパク質ペプチド複合体のポストドッキング解析2015

    • Author(s)
      大上雅史, 内古閑伸之,松崎由理,秋山泰
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学,金沢市,石川県
    • Year and Date
      2015-09-14
    • Data Source
      KAKENHI-PROJECT-15K00407
  • [Presentation] タンパク質間相互作用残基の物理化学的性質による単純化プロファイルを用いたポストドッキング解析2015

    • Author(s)
      大上雅史,内古閑伸之,松崎由理,秋山泰
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール,徳島市,徳島県
    • Year and Date
      2015-06-24
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Analysis of protein docking decoys in terms of physicochemical properties of protein surfaces using rigid-body docking process2015

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      3rd IIT Madras-Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics
    • Place of Presentation
      インド工科大学マドラス校,チェンナイ,インド
    • Year and Date
      2015-11-05
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] タンパク質間相互作用予測システムMEGADOCKによるEGFRパスウェイ解析2015

    • Author(s)
      大上雅史,松崎由理,石田貴士,秋山泰
    • Organizer
      第21回創剤フォーラム若手研究会
    • Place of Presentation
      東京大学本郷キャンパス, 文京区,東京都
    • Year and Date
      2015-11-28
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] アミノ酸プロファイルによるタンパク質ペプチド複合体のポストドッキング解析2015

    • Author(s)
      大上雅史, 内古閑伸之,松崎由理,秋山泰
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学,金沢市,石川県
    • Year and Date
      2015-09-14
    • Data Source
      KAKENHI-PROJECT-15K16081
  • [Presentation] Analysis of protein docking decoys in terms of physicochemical properties of protein surfaces using rigid-body docking process2015

    • Author(s)
      Nobuyuki Uchikoga, Yuri Matsuzaki, Masahito Ohue, Yutaka Akiyama
    • Organizer
      3rd IIT Madras - Tokyo Tech Joint Symposium on Algorithms and Applications of Bioinformatics
    • Place of Presentation
      インド工科大学マドラス校,チェンナイ,インド
    • Year and Date
      2015-11-05
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K00407
  • 1.  Yamamoto Kazuki (90758301)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 1 results
  • 2.  Akiyama Yutaka (30243091)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 59 results
  • 3.  内古閑 伸之 (20397483)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 11 results
  • 4.  松崎 由理 (30572888)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 14 results
  • 5.  森脇 由隆 (70751303)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 6.  菊地 和也 (70292951)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 7.  榊原 康文 (10287427)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 8.  伊藤 寛晃 (20758205)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  丹羽 節 (30584396)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  荒井 緑 (40373261)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  大森 建 (50282819)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 12.  上田 実 (60265931)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 13.  鎌田 真由美 (70749077)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 14.  吉田 稔 (80191617)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  淺沼 克彦 (60449064)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 16.  SEKIJIMA Masakazu
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 17.  中村 明宏
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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