SAKAKIBARA Yasubumi  榊原 康文

Vasanthan Jayakumar and Yasubumi Sakakibara

Briefings in Bioinformatics

Open Access / Peer Reviewed

Aoto Yoshimasa、Hachiya Tsuyoshi、Okumura Kazuhiro、Hase Sumitaka、Sato Kengo、Wakabayashi Yuichi、Sakakibara Yasubumi

PLoS One.

Volume : 12

Open Access / Peer Reviewed

KAKENHI-PLANNED-17H06410, KAKENHI-PROJECT-15K06817, KAKENHI-PROJECT-15K08438, KAKENHI-PROJECT-16H06279

Spallek, T., Melnyk, C.W., Wakatake, T., Zhang, J., Sakamoto, Y., Kiba, T., Yoshida, S., Matsunaga, S., Sakakibara, H., *Shirasu, K.

Proceedings of the National Academy of Sciences

Volume : 印刷中 Pages : 5283-5288

Open Access / Acknowledgement Compliant / Int'l Joint Research / Peer Reviewed

KAKENHI-PLANNED-15H05959, KAKENHI-PROJECT-24228008, KAKENHI-PROJECT-17K07705, KAKENHI-INTERNATIONAL-15K21750, KAKENHI-PROJECT-25711019, KAKENHI-PLANNED-15H05962, KAKENHI-PUBLICLY-16H01477, KAKENHI-PROJECT-16H06279

Hoshino A, Jayakumar V, Nitasaka E, Toyoda A, Noguchi H, Itoh T, Shin T, Minakuchi Y, Koda Y, Nagano AJ, Yasugi M, Honjo MN, Kudoh H, et al.

Nature Communications

Volume : 7 Pages : 132395-132395

Springer Nature

2041-1723

2016-11-08

English

Peer Reviewed / Open Access

KAKENHI-PROJECT-26221106, KAKENHI-PROJECT-16H04719, KAKENHI-PROJECT-15K07118, KAKENHI-PROJECT-16H06279

Tsuchiya M, Amano K, Abe M, Seki M, Hase S, Sato K, Sakakibara Y.

Bioinformatics

Volume : 32 Issue : 12

Open Access / Peer Reviewed

Kumozaki, S., Sato, K., Sakakibara, Y.

IEEE/ACM Trans Comput Biol Bioinform

Volume : 印刷中

Acknowledgement Compliant / Peer Reviewed

Tsugawa, H., Mori, H., Matsuzaki, J., Masaoka, T., Hirayama, T., Nagasawa, H., Sakakibara, Y., Suematsu, M., Suzuki, H.

BioMed Research. International.

Volume : 2015 Pages : 734548-734548

Open Access / Acknowledgement Compliant / Peer Reviewed

KAKENHI-PROJECT-26670065, KAKENHI-PROJECT-25460173, KAKENHI-PROJECT-25460301, KAKENHI-PROJECT-25293178, KAKENHI-PROJECT-25702050

Kumozaki, S., Sato, K., and Sakakibara, Y.

IEEE/ACM Trans Comput Biol Bioinform,

Volume : in press

Peer Reviewed

Afiahayati, Sato, K., and Sakakibara, Y.

DNA Research

Volume : 22 Pages : 69-77

Open Access / Acknowledgement Compliant / Peer Reviewed

KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-25330348, KAKENHI-PROJECT-221S0002

Sato, K., Kuroki, Y., Kumita, W., Fujiyama, A., Toyoda, A., Kawai, J., Iriki, A., Sasaki, E., Okano, H., Sakakibara, Y.

Scientific Reports

Volume : 5 Pages : 16894-16894

Open Access / Acknowledgement Compliant / Peer Reviewed

KAKENHI-PROJECT-25330348, KAKENHI-PROJECT-221S0002

Kamada, M., Hase, S., Sato, K., Toyoda, A., Fujiyama, A., Sakakibara, Y.

PLoS ONE

Volume : 9

Open Access / Acknowledgement Compliant / Peer Reviewed

KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-25330348, KAKENHI-PROJECT-221S0002

Okumura K, Saito M, Isogai E, Aoto Y, Hachiya T, Sakakibara Y, Katsuragi Y, Hirose S, Kominami R, Goitsuka R, Nakamura T and Wakabayashi Y.

PloS One.

Volume : 9

Open Access / Peer Reviewed

KAKENHI-PROJECT-23241066, KAKENHI-ORGANIZER-24111001, KAKENHI-PUBLICLY-25111513, KAKENHI-PROJECT-25292194, KAKENHI-PROJECT-26250029, KAKENHI-PROJECT-26640085

Afiahayati, Sato K., Sakakibara Y.

PeerJ

Volume : 1

Peer Reviewed

KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-221S0002

Tabata H, Hachiya T, Nagata K, Sakakibara Y, Nakajima K

Front. Neuroanat.

Volume : 7 Pages : 24-24

Open Access / Acknowledgement Compliant / Peer Reviewed

KAKENHI-ORGANIZER-22111001, KAKENHI-PLANNED-22111004, KAKENHI-PROJECT-22240041, KAKENHI-PUBLICLY-25123727, KAKENHI-PROJECT-25430046, KAKENHI-PROJECT-221S0002

Okamoto M, Namba T, Shinoda T, Kondo T, Watanabe T, Inoue Y, Takeuchi K, Enomoto Y, Ota K, Oda K, Wada Y, Sagou K, Saito K, Sakakibara A, Kawaguchi A, Nakajima K, Adachi T, Fujimori T, Ueda M, Hayashi S, Kaibuchi K, Miyata T

Nat. Neurosci.

Volume : 16 Pages : 1556-66

Open Access / Peer Reviewed

KAKENHI-PLANNED-21116005, KAKENHI-ORGANIZER-22111001, KAKENHI-PLANNED-22111002, KAKENHI-PLANNED-22111004, KAKENHI-PLANNED-22111006, KAKENHI-PLANNED-22111007, KAKENHI-PROJECT-22240041, KAKENHI-PROJECT-23500410, KAKENHI-PROJECT-23700463, KAKENHI-PROJECT-25830033

Yuji Kubo

J Biosci Bioeng

Volume : 115 Pages : 654-657

Peer Reviewed

KAKENHI-PROJECT-22780078, KAKENHI-PROJECT-221S0002

Popendorf, K. and Sakakibara, Y.

Bioinformatics

Volume : 28 Pages : 1276-1277

Peer Reviewed

KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-221S0002

Sakakibara, Y., Hachiya, T., Uchida, M., Nagamine, N., Sugawara, Y., Yokota, M., Nakamura, M., Popendorf, K., Komori, T., Sato, K.

Bioinformatics

Volume : 28 Pages : 745-746

Peer Reviewed

Nakamura, M., Hachiya, T., Saito, Y., Sato, K., and Sakakibara, Y.

BMC Bioinformatics

Volume : 13

Peer Reviewed

KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-221S0002

Namiki, T., Hachiya, T., Tanaka, H., and Sakakibara, Y.

Nucleic Acids Research

Volume : 40

Peer Reviewed

KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-221S0002

Kengo Sato, Yuki Kato, Tatsuya Akutsu, Kiyoshi Asai, Yasubumi Sakakibara

Bioinformatics

Volume : 28 Pages : 3218-3224

Peer Reviewed

KAKENHI-PROJECT-22240009, KAKENHI-PROJECT-22240031, KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-24700296, KAKENHI-PROJECT-221S0002

Okada, Y., Saito, Y., Sato, K., Sakakibara, Y.

Frontiers in Genetics

Volume : 2 Pages : 54-54

Peer Reviewed

Yohei Okada

Frontiers in Genetics

Volume : 2 Pages : 54-54

Peer Reviewed

KAKENHI-PROJECT-22700305, KAKENHI-PROJECT-23241066

Saito, Y., Sato, K., Sakakibara, Y.

BMC Bioinformatics

Volume : 12

Peer Reviewed

Morita, M., Saito, Y., Sato, K., Oka, K., Hotta, K., Sakakibara, Y.

Nucleic Acids Research 37(3)

Pages : 999-1009

Peer Reviewed

M. Morita, Y. Saito, K Sato, K Oka, K Hotta, and Y. Sakakibara

Nucleic Acids Research 37

Pages : 999-1009

Peer Reviewed

Nagamine, N., Shirakawa, T., Minato, Y., Torii, K., Kobayashi, H., Imoto, M., Sakakibara, Y.

PLoS Computational Biology 5(6)

Pages : 1000397-1000397

Peer Reviewed

Akama, T., Suzuki, K., Tanigawa, T., Kawashima, A., Wu, H., Nakata, N., Osana, Y., Sakakibara, Y., Ishii, N.

Journal of Bacteriology 191

Pages : 3321-3327

Peer Reviewed

Morita, M., Saito, Y., Sato, K., Oka, K., Hotta, K., Sakakibara, Y.

Nucleic Acids Research 37(3)

Pages : 999-1009

Peer Reviewed

Hachiya, T., Osana, Y., Popendorf, K., Sakakibara, Y.

Bioinformatics 25(7)

Pages : 853-860

Peer Reviewed

Akama, T., Suzuki, K., Tanigawa, T., Kawashima, A., Wu, H., Nakata, N., Osana. Y.. Sakakibara, Y.. Ishii, N.

Journal of Bacteriology 191

Pages : 3321-3327

Peer Reviewed

Hachiya, T., Sakakibara, Y.

Genes, Genomes and Genomics 3(1)

Pages : 31-45

Peer Reviewed

Sato, K., Morita, K., and Sakakibara, Y.

Journal of Mathematical Biology y 56

Pages : 201-214

Peer Reviewed

Asai, K, Kiryu, H, Hamada, M, Tabei, Y, Sato, K, Matsui, H, Sakakibara, Y, Terai, G,, Mituyama, T.

Nucleic Acids Res. 36

Peer Reviewed

K Sato, T. Mituyama, K Asai, and Y. Sakakibara

BMC Bioinformatics 9

Pages : 318-318

Peer Reviewed

Sato, K., Morita, K., Sakakibara, Y.

Journal of Mathematical Biology 56

Pages : 201-214

Peer Reviewed

Asai, K, Kiryu, H, Hamada., M., Tabei, Y., Sato, K, Matsui, H., Sakakibara, Y., Terai, G., and Mituyama. T.

Nucleic Acids Research 36

Peer Reviewed

Sato, K., Mituyama, T., Asai, K., Sakakibara, Y.

BMC Bioinformatics 9

Pages : 318-318

Peer Reviewed

Sakakibara, Y., Ogawa, N・, Popendorf, K., Asai, K., and K. Sato

Journal of Bioinformatics and Computational Biology 5・6

Pages : 1103-1122

Peer Reviewed

Sakakibara, Y., Asai, K., Sato, K.

Proc. 1st International Conference on Bioinformatics Research and Development

Pages : 278-291

「研究成果報告書概要(和文)」より

Sakakibara, Y., Ogawa, N., Popendorf, K., Asai, K., K. Sato

Journal of Bioinformatics and Computational Biology 5(6)

Pages : 1103-1122

Peer Reviewed

Nagamine, N., Sakakibara, Y.

Bioinformatics 23(15)

Pages : 2004-2012

Peer Reviewed

Sakakibara, Y., Asai, K., Sato, K.

Proc. 1st International Conference on Bioinformatics Research And Development

Pages : 278-291

「研究成果報告書概要(欧文)」より

Nagamine, N. and Sakakibara, Y.

Bioinformatics 23・15

Pages : 2004-2012

Peer Reviewed

Sakakibara, Y., Asai, K., Sato, K.

Proc. 1st International Conference on Bioinformatics Research and Development

Pages : 278-291

Kawada, Y., Sakakibara, Y.

Proceedings of the 4th Asia-Pacific Bioinformatics Conference (APBC 2006)

Pages : 89-98

Y.Sakakibara, T.Yokomori, S.Kobayashi, A.Suyama

Formal Models, Languages And Applications (edited by Subramanian et al.) (World Scientific Pub.)

Pages : 304-319

Kawada, Y., Sakakibara, Y.

Proceedings of the 4th Asia-Pacific Bioinformatics Conference (APBC 2006)

Pages : 89-98

「研究成果報告書概要(和文)」より

atsui, H., Sato, K., Sakakibara, Y.

Bioinformatics 21(11)

Pages : 2611-2617

Peer Reviewed

榊原康文

情報処理学会雑誌 46・3

Pages : 230-238

「研究成果報告書概要(和文)」より

Nagamine, N., Kawada, Y., Sakakibara, Y.

Nucleic Acids Research 33・15

Pages : 4828-4837

「研究成果報告書概要(和文)」より

榊原 康文

情報処理学会雑誌 Vol.46,No.3

Pages : 230-238

Nagamine, N., Kawada, Y., Sakakibara, Y.

Nucleic Acids Research 33・15

Pages : 4828-4837

Sakakibara, Y.

IEEE Transactions on Pattern Analysis and Machine Intelligence 27(7)

Pages : 1051-1062

Peer Reviewed

J.Kuramochi, Y.Sakakibara

Proceedings of 11th International Meeting on DNA Based Computers

Pages : 59-67

Sato, K., Sakakibara, Y.

Bioinformatics 21・2

Sakakibara, Y.

IEEE Transactions on Pattern Analysis and Machine Intelligence 27(7)

Pages : 1051-1062

「研究成果報告書概要(欧文)」より

H, Nakagawa, K.Sakamoto, Y.Sakakibara

Proceedings of 11th International Meeting on DNA Based Computers

Pages : 68-77

Sato, K., Sakakibara, Y.

Bioinformatics 21(2)

「研究成果報告書概要(欧文)」より

Nagamine, N., Kawada, Y., Sakakibara, Y.

Nucleic Acids Research 33(15)

Pages : 4828-4837

Peer Reviewed

Sakakibara, Y.

BIOINFO 2005 (proceedings of 2005 International Joint Conference of InCoB, AASBi and KSBI)

Pages : 113-117

Sakakibara, Y.

IEEE Transactions on Pattern Analysis and Machine Intelligence 27・7

Pages : 1051-1062

「研究成果報告書概要(和文)」より

Sato, K., Sakakibara, Y.

Bioinformatics 21(Suppl.2)

Pages : 237-242

Peer Reviewed

Nagamine, N., Kawada, Y., Sakakibara, Y.

Nucleic Acids Research 33(15)

Pages : 4828-4837

「研究成果報告書概要(欧文)」より

Sakakibara, Y.

IEEE Transactions on Pattern Analysis and Machine Intelligence 27・7

Pages : 1051-1062

Sato, K., Sakakibara, Y.

Bioinformatics 21・2

「研究成果報告書概要(和文)」より

小林 聡, 榊原康文, 横森 貴

分子コンピュータの現状と展望(萩谷編),サイエンス社

Pages : 32-40

Y.Sakakibara, H.Imai

Journal of Automata, Languages and Combinatorics 9・1

Pages : 111-119

榊原康文

分子コンピュータの現状と展望(萩谷編),サイエンス社

Pages : 84-90

Y.Kawada, Y.Sakakibara

12th Inter. Conf. on Intelligent Systems for Molecular Biology and 3rd European Conf. on Computational Biology

「研究成果報告書概要(和文)」より

Y.Kawada, Y.Sakakibara

12th Inter.Conf.on Intelligent Systems for Molecular Biology and

Pages : 106-106

H.Matsui, K.Sato, Y.Sakakibara

Proceedings of 3rd Computational Systems Bioinformatics Conference (CSB2004)

Pages : 290-299

「研究成果報告書概要(和文)」より

H.Matsui, K.Sato, Y.Sakakibara

Proceedings of 3rd Computational Systems Bioinformatics Conference

Pages : 290-299

Y.Kawada, Y.Sakakibara

12th Inter. Conf. on Intelligent Systems for Molecular Biology and 3rd European Conf. on Computational Biology D-32

Pages : 106-106

「研究成果報告書概要(欧文)」より

榊原康文

日本農芸化学会2018年度大会シンポジウム

吉澤康博、奥村和弘、斎藤慈、宗形春花、青戸良賢、磯貝恵理子、榊原康文、若林雄一

第30回モロシヌス研究会

吉澤康博、奥村和弘、斎藤慈、宗形春花、青戸良賢、磯貝恵理子、榊原康文、若林雄一

第30回モロシヌス研究会

吉澤康博、奥村和弘、斎藤慈、宗形春花、青戸良賢、磯貝恵理子、榊原康文、若林雄一

第63回日本実験動物学会総会

ミューザ川崎シンフォニーホール

2016-05-18

Int'l Joint Research

吉澤康博、奥村和弘、斎藤慈、宗形春花、青戸良賢、磯貝恵理子、榊原康文、若林雄一

第75回日本癌学会学術総会

パシフィコ横浜

2016-10-06

Int'l Joint Research

吉澤康博、奥村和弘、斎藤慈、宗形春花、青戸良賢、磯貝恵理子、榊原康文、若林雄一

第39回日本分子生物学会年会

パシフィコ横浜

2016-11-30

Int'l Joint Research

青戸良賢, 奥村和弘, 石川冬木, 若林雄一, 榊原康文

第74回日本癌学会学術総会

愛知県名古屋市

2015-10-08

鎌田真由美，長谷純崇，木村啓太郎，佐藤健吾，豊田敦，藤山秋佐夫，榊原康文

第８回日本ゲノム微生物学会年会

東京農業大学

2015-03-07

佐藤健吾，柏木駿也，榊原康文

第3回生命医薬情報学連合大会，日本バイオインフォマティクス学会2014年年会

仙台国際センター（宮城県・仙台市）

2014-10-03

白木澤沙衣，飯笹俊彦，横井左奈，榊原康文

第73回日本癌学会学術総会

パシフィコ横浜（神奈川県・横浜市）

2014-09-25

青戸良賢，若林雄一，榊原康文

第72回日本癌学会学術総会

パシフィコ横浜

Mayumi Okamoto, Takashi Namba, Tomoyasu Shinoda, Ken Sagou, Kanako Saito, Akira Sakakibara, Ayako Kawaguchi, Kazunori Nakajima, Masahiro Ueda, Shigeo Hayashi, Toshihiko Fujimori, Kozo Kaibuchi, and Takaki Miyata

第46回日本発生生物学会年会

くにびきメッセ（島根県）

Hidenori Tabata, Yasubumi Sakakibara, Koh-ichi Nagata, and Kazunori Nakajima

Society for Neuroscience, Neuroscience 2013 Meeting

San Diego (U.S.A.)

天野浩司郎，青戸良賢，若林雄一，榊原康文

第72回日本癌学会学術総会

パシフィコ横浜

６） 青戸良賢，八谷剛史，奥村和弘，長谷純崇，佐藤健吾，若林雄一，榊原康文

情報処理学会第33回バイオ情報学研究発表会

仙台

榊原康文，鈴木秀和

第72回日本癌学会学術総会

パシフィコ横浜

田畑秀典、榊原康文、永田浩一、仲嶋一範

第36回日本神経科学大会・第56回日本神経化学会大会・第23回日本神経回路学会大会合同大会（Neuro2013）

国立京都国際会館（京都府）

岡本麻友美、難波隆志、篠田友靖、佐合健、斉藤加奈子、榊原明、川口綾乃、仲嶋一範、上田昌宏、林茂生、藤森俊彦 、貝淵弘三、宮田卓樹

第36回日本神経科学大会・第56回日本神経化学会大会・第23回日本神経回路学会大会合同大会（Neuro2013）

国立京都国際会館（京都府）

天野浩司郎，青戸良賢，若林雄一，榊原康文

第72回日本癌学会学術総会

パシフィコ横浜

青戸良賢，若林雄一，榊原康文

第72回日本癌学会学術総会

パシフィコ横浜

M.Okamoto, T.Namba, T.Shinoda, K.Sagou, K.Saito, A.Sakakibara, A.Kawaguchi, K.Nakajima, M.Ueda, S.Hayashi, T.Fujimori, K.Kaibuchi, and T.Miyata

第118回日本解剖学会総会・全国学術集会

サンポートホール高松・かがわ国際会議場（香川県）

榊原康文，鈴木秀和

第72回日本癌学会学術総会

パシフィコ横浜

田畑秀典、八谷剛史、榊原康文、仲嶋一範

第35回日本神経科学大会

名古屋国際会議場（愛知県）

９） Abe, M., Hase, S., Ogawa, M., Okada, Y., Sato, K., Saito, Y., and Sakakibara, Y.

RNA 2011 Sixteenth Annual Meeting of the RNA Society,

Kyoto, Japan

田畑秀典、八谷剛史、榊原康文、仲嶋一範

34回日本神経科学大会

パシフィコ横浜(神奈川県)

Namiki, T., Hachiya, T., Tanaka, H., Sakakibara, Y.

ACM Conference on Bioinformatics, Computational Biology and Biomedicine 2011

Chicago, USA

Abe, M., Hase, S., Ogawa, M., Okada, Y., Sato, K., Saito, Y., Sakakibara, Y.

RNA 2011 Sixteenth Annual Meeting of the RNA Society

Kyoto, Japan

Sato, K., Saito, Y., Sakakibara, Y.

Genome Informatics

Yokohama, Japan

2009-12-14

Sato, K., Saito, Y., Sakakibara, Y.

Genome Informatics

横浜

2009-12-14

Sato, K., Hamada, M., Mituyama, T., Asai, K., Sakakibara, Y.

Proceedings of 9th Workshop on Algorithms in Bioinformatics (WABI 2009)

Philadelphia, USA

2009-09-12

Sato, K., Hamada, M., Mituyama, T., Asai, K., Sakakibara, Y.

Proceedings of 9th Workshop on Algorithms in Bioinformatics (WABI 2009)

フィラデルフィア,米国

2009-09-12

Saito, Y., Sato, K., Sakakibara, Y.

The 2008 Annual Conference of Japanese Society for Bioinformatics (JSBi 2008)

Osaka, Japan(口頭発表)

2008-12-16

Y. Saito, K Sato, and Y. Sakakibara

The 2008 Annual Conference of Japanese Soci etv for Bioinformatics (JSBi 2008)

Osaka, Japan

2008-12-15

Hachiya, T., Osana, Y., Popendorf, K., Sakakibara, Y.

Proc. 2007 Annual Conference of Japanese Society for Bioinformatics (JSBi 2007)

Tokyo, Japan

2007-12-18

Hachiya, T., Osana, Y., Popendorf, K., and Sakakibara, Y.

2007 Annual Conference of Japanese Society for Bioinformatics (JSBi 2007)

Tokyo, Japan

2007-12-18

Sakakibara, Y., Asai, K., Sato, K.

Proc. 1st International Conference on Bioinformatics Research and Development

Berlin, Germany

2007-03-13

Kawada, Y., Sakakibara, Y.

Proceedings of the 4th Asia-Pacific Bioinformatics Conference (APBC 2006)

Taiwan, China

2006-02-14

Hachiya, T., Sakakibara, Y.

BIOINFO 2005 (proceedings of 2005 International Joint Conference of InCoB, AASBi and KSBI)

Busan, Korea

2005-09-22

Hidenori Tabata, Satoshi Yoshinaga, Yasubumi Sakakibara, Koh-ichi Nagata, Kazunori Nakajima

Neuro2013 Satellite Symposium “Molecular & Cellular Mechanisms of Brain Development & Evolution”

京都府立医科大学（京都府）

田畑秀典、八谷剛史、永田浩一、榊原康文、仲嶋一範

日本バイオインフォマティクス学会2013年年会

タワーホール船堀（東京都）