Okuda Satoru 奥田覚

… Alternative Names

OKUDA Satoru 奥田覚

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Researcher Number	80707836
Other IDs	https://orcid.org/0000-0003-3792-8067
Affiliation (Current)	2025: 金沢大学, ナノ生命科学研究所, 准教授
Affiliation (based on the past Project Information) *help	2019 – 2025: 金沢大学, ナノ生命科学研究所, 准教授 2018: 京都大学, ウイルス・再生医科学研究所, 共同研究員 2016 – 2017: 国立研究開発法人理化学研究所, 多細胞システム形成研究センター, 基礎科学特別研究員 2015: 国立研究開発法人理化学研究所, 多細胞システム形成研究センター, 研究員 2014: 独立行政法人理化学研究所, 多細胞システム形成研究センター, 研究員 2013: 独立行政法人理化学研究所, 発生・再生科学総合研究センター, 研究員
Review Section/Research Field	Principal Investigator Basic Section 18010:Mechanics of materials and materials-related / Transformative Research Areas, Section (III) / Medium-sized Section 18:Mechanics of materials, production engineering, design engineering, and related fields / Biological Sciences / Developmental biology / Materials/Mechanics of materials Except Principal Investigator Medium-sized Section 53:Organ-based internal medicine and related fields / Basic Section 44010:Cell biology-related / Transformative Research Areas, Section (III) / Medium-sized Section 48:Biomedical structure and function and related fields / Biological physics/Chemical physics/Soft matter physics / Constructive Systems Biology
Keywords	Principal Investigator 生体力学 / バイオメカニクス / 計算力学 / 多細胞力学 / メカノバイオロジー / 材料力学試験 / ゆらぎ / 機械材料 / 弾塑性 / シミュレーション … More / 多細胞動態 / 形態形成 / 神経発生 / バイオメカ二クス / ３次元バーテックスモデル / 器官形成 / 三次元バーテックスモデル / ＲＮＲモデル / 発生生物 / 粗視化モデル / RNRモデル / 粘性効果 / 多細胞ダイナミクス / 組織形態形成 … More Except Principal Investigator 形態形成 / 数理モデル / ライブイメージング / 皮膚 / テレスコープモデル / 器官発生 / 単一粒子追跡 / 相分離 / クロマチン / 転写因子 / 核内動態 / 粘弾性 / 1分子計測 / 理論モデル / 細胞膜 / メカノケミカルフィードバック / 細胞骨格 / オルガノイド / 反応拡散系 / フェーズフィールドモデル / バーテックスモデル / 老化 / 脳 / タンパク / 一方向移動 / 細胞シート / 平面内極性 / ３次元頂点モデル / 配置換え / 細胞の集団運動 / 収縮力 / エンドサイトーシス / 接着力 / レオロジー / 集団運動 / 細胞の配置換え / 細胞極性 / 登頂面の収縮力 / 上皮細胞 / 発生 / １細胞解析 / １細胞RNA-seq / イメージング / 応力推定 / 1細胞RNA-seq / 上皮形態形成 / ショウジョウバエ / 胚発生 Less

テレスコープモデルに基づく皮膚付属器官の多様性創発原理の解明とその応用
- Principal Investigator
  
  藤原裕展
- Project Period (FY)
  2025 – 2028
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 53:Organ-based internal medicine and related fields
- Research Institution
  Institute of Physical and Chemical Research
多細胞組織の適応的な機械特性によって器官形成が頑強に制御される機構の解明Principal Investigator
- Principal Investigator
  
  奥田覚
- Project Period (FY)
  2025 – 2027
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 18010:Mechanics of materials and materials-related
- Research Institution
  Kanazawa University
Theoretical understanding of cell-competition by 3D mechanics-based modelingPrincipal Investigator
- Principal Investigator
  
  奥田覚
- Project Period (FY)
  2024 – 2025
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Kanazawa University
Regulatory mechanism of elasticity-mediated neuroplasticity by ECM: AFM measurement of brainPrincipal Investigator
- Principal Investigator
  
  奥田覚
- Project Period (FY)
  2024 – 2025
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Kanazawa University
Theoretical study of self-organization induced by mechanochemical feedback
- Principal Investigator
  
  柴田達夫
- Project Period (FY)
  2022 – 2026
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Institute of Physical and Chemical Research
核内の粘弾的特性がNanogの転写調節領域の空間的ゆらぎを制御する
- Principal Investigator
  
  岡本和子
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 44010:Cell biology-related
- Research Institution
  Hiroshima University
Role of fluctuation in regulating the elastic-plastic property of tissues during organogenesisPrincipal Investigator
- Principal Investigator
  
  Okuda Satoru
- Project Period (FY)
  2022 – 2023
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 18:Mechanics of materials, production engineering, design engineering, and related fields
- Research Institution
  Kanazawa University
Unraveling the role of peri-synaptic collagen in ageing with protein engineering
- Principal Investigator
  
  長井淳
- Project Period (FY)
  2021 – 2024
- Research Category
  
  Fund for the Promotion of Joint International Research (Fostering Joint International Research (B))
- Review Section
  
  Medium-sized Section 48:Biomedical structure and function and related fields
- Research Institution
  Institute of Physical and Chemical Research
Active mechanical properties of three-dimensional multicellular tissues and their adaptive regulatory mechanismsPrincipal Investigator
- Principal Investigator
  
  奥田覚
- Project Period (FY)
  2021 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 18010:Mechanics of materials and materials-related
- Research Institution
  Kanazawa University
Dynamic fluctuation characteristics of cellular force generations and solid mechanical roles during organogenesisPrincipal Investigator
- Principal Investigator
  
  Okuda Satoru
- Project Period (FY)
  2020 – 2021
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 18:Mechanics of materials, production engineering, design engineering, and related fields
- Research Institution
  Kanazawa University
Mathematical modeling of brain development: transformation from temporal control of cell differentiation and proliferation to spatial constructionPrincipal Investigator
- Principal Investigator
  
  奥田覚
- Project Period (FY)
  2019 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Kanazawa University
Toward understanding of the principle of embryogenesis by an integrated approach of single-cell genomics and mechanics
- Principal Investigator
  
  Kondo Takefumi
- Project Period (FY)
  2017 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Constructive Systems Biology
- Research Institution
  Kyoto University
Collective migration of epithelial cells: a fundamental mechanics of morphogenesis
- Principal Investigator
  
  Sato Katsuhiko
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Biological physics/Chemical physics/Soft matter physics
- Research Institution
  Hokkaido University
Stress field estimation in three-dimensional optic-cup by image-based modelingPrincipal Investigator
- Principal Investigator
  
  Okuda Satoru
- Project Period (FY)
  2015 – 2016
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Developmental biology
- Research Institution
  Institute of Physical and Chemical Research
Mechanical analysis of three-dimensional multicellular dynamics during organogenesisPrincipal Investigator
- Principal Investigator
  
  OKUDA Satoru
- Project Period (FY)
  2013 – 2014
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Materials/Mechanics of materials
- Research Institution
  The Institute of Physical and Chemical Research

All 2024 2023 2022 2021 2020 2019 2017 2016 2015 2014 2013 Other

All Journal Article Presentation Book

[Book] 医学のあゆみ2020
- Author(s)
  坪井有寿, 奥田覚, 藤本仰一
- Total Pages
  7
- Publisher
  医学書院
- Data Source
  KAKENHI-PROJECT-20K20958
[Book] 医学のあゆみ2020
- Author(s)
  坪井有寿, 奥田覚, 藤本仰一
- Total Pages
  7
- Publisher
  医学書院
- Data Source
  KAKENHI-PUBLICLY-19H04777
[Book] 実験医学2015
- Author(s)
  奥田覚，永楽元次
- Total Pages
  4
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-15K14534
[Journal Article] Actin crosslinking by α-actinin averts viscous dissipation of myosin force transmission in stress fibers2023
- Author(s)
  Katsuta Hiroki、Okuda Satoru、Nagayama Kazuaki、Machiyama Hiroaki、Kidoaki Satoru、Kato Masashi、Sokabe Masahiro、Miyata Takaki、Hirata Hiroaki
- Journal Title
  
  iScience
  
  Volume: 26 Issue: 3 Pages: 106090-106090
- DOI
  10.1016/j.isci.2023.106090
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17KT0033, KAKENHI-PROJECT-21K18326, KAKENHI-PROJECT-22K19890, KAKENHI-PROJECT-22KK0145, KAKENHI-PLANNED-21H05127, KAKENHI-PROJECT-21H02656, KAKENHI-PROJECT-21H03804, KAKENHI-PROJECT-20K12596, KAKENHI-PROJECT-19H01147, KAKENHI-PUBLICLY-21H00363, KAKENHI-PLANNED-22H05170, KAKENHI-PROJECT-19H05627
[Journal Article] Multicellular dynamics on structured surfaces: Stress concentration is a key to controlling complex microtissue morphology on engineered scaffolds2023
- Author(s)
  Matsuzawa Ryosuke、Matsuo Akira、Fukamachi Shuya、Shimada Sho、Takeuchi Midori、Nishina Takuya、Kollmannsberger Philip、Sudo Ryo、Okuda Satoru、Yamashita Tadahiro
- Journal Title
  
  Acta Biomaterialia
  
  Volume: 166 Pages: 301-316
- DOI
  10.1016/j.actbio.2023.05.012
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749, KAKENHI-PROJECT-21K18041, KAKENHI-PROJECT-23K20904
[Journal Article] Machine learning-based estimation of spatial gene expression pattern during ESC-derived retinal organoid development2023
- Author(s)
  Fujimura Yuki、Sakai Itsuki、Shioka Itsuki、Takata Nozomu、Hashimoto Atsushi、Funatomi Takuya、Okuda Satoru
- Journal Title
  
  Scientific Reports
  
  Volume: 13 Issue: 1
- DOI
  10.1038/s41598-023-49758-y
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749, KAKENHI-PROJECT-23K20904
[Journal Article] Modelling contractile ring formation and division to daughter cells for simulating proliferative multicellular dynamics2023
- Author(s)
  Okuda Satoru、Hiraiwa Tetsuya
- Journal Title
  
  The European Physical Journal E
  
  Volume: 46 Issue: 7
- DOI
  10.1140/epje/s10189-023-00315-5
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749, KAKENHI-PROJECT-23K20904
[Journal Article] Long-term adherent cell dynamics emerging from energetic and frictional interactions at the interface2023
- Author(s)
  Okuda Satoru、Hiraiwa Tetsuya
- Journal Title
  
  Physical Review E
  
  Volume: 107 Issue: 3 Pages: 034406-034406
- DOI
  10.1103/physreve.107.034406
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21KK0134, KAKENHI-PROJECT-22K18749, KAKENHI-PROJECT-23K20904
[Journal Article] Continuum modeling of non-conservative fluid membrane for simulating long-term cell dynamics2022
- Author(s)
  Okuda Satoru、Sato Katsuhiko、Hiraiwa Tetsuya
- Journal Title
  
  The European Physical Journal E
  
  Volume: 45 Issue: 8 Pages: 0-0
- DOI
  10.1140/epje/s10189-022-00223-0
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749, KAKENHI-PROJECT-21KK0134, KAKENHI-PROJECT-20K03871, KAKENHI-PROJECT-18H01135, KAKENHI-PROJECT-23K20904, KAKENHI-PLANNED-21H05310, KAKENHI-PLANNED-22H05170
[Journal Article] Polarized interfacial tension induces collective migration of cells, as a cluster, in a 3D tissue2022
- Author(s)
  Okuda Satoru、Sato Katsuhiko
- Journal Title
  
  Biophysical Journal
  
  Volume: 121 Issue: 10 Pages: 1856-1867
- DOI
  10.1016/j.bpj.2022.04.018
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K18749, KAKENHI-PROJECT-20K03871, KAKENHI-PROJECT-18H01135, KAKENHI-PROJECT-23K20904, KAKENHI-PLANNED-21H05310
[Journal Article] Mechanics in Self-organizing Organoid Morphogenesis2020
- Author(s)
  奥田覚
- Journal Title
  
  Seibutsu Butsuri
  
  Volume: 60 Issue: 1 Pages: 031-036
- DOI
  10.2142/biophys.60.031
- NAID
  130007790186
- ISSN
  0582-4052, 1347-4219
- Language
  Japanese
- Peer Reviewed
- Data Source
  KAKENHI-PUBLICLY-19H04777
[Journal Article] A Mechanical Instability in Planar Epithelial Monolayers Leads to Cell Extrusion2020
- Author(s)
  Satoru Okuda, Koichi Fujimoto
- Journal Title
  
  Biophysical Journal
  
  Volume: 118 Issue: 10 Pages: 2549-2560
- DOI
  10.1016/j.bpj.2020.03.028
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K20958, KAKENHI-PUBLICLY-19H04777, KAKENHI-PLANNED-17H06386, KAKENHI-PUBLICLY-20H05415, KAKENHI-PROJECT-17KT0021
[Journal Article] Apical Junctional Fluctuations Lead to Cell Flow while Maintaining Epithelial Integrity2019
- Author(s)
  Okuda Satoru、Kuranaga Erina、Sato Katsuhiko
- Journal Title
  
  Biophysical Journal
  
  Volume: 116 Issue: 6 Pages: 1159-1170
- DOI
  10.1016/j.bpj.2019.01.039
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17KT0021, KAKENHI-PROJECT-17H02939, KAKENHI-PROJECT-18H01135, KAKENHI-PLANNED-26114003
[Journal Article] Modeling cell apoptosis for simulating three-dimensional multicellular morphogenesis based on a reversible network reconnection framework2016
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Mototsugu Eiraku, Taiji Adachi, and Yoshiki Sasai
- Journal Title
  
  Biomechanics and Modeling in Mechanobiology
  
  Volume: 未定印刷中 Issue: 4 Pages: 1-1
- DOI
  10.1007/s10237-015-0724-7
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-15K14534, KAKENHI-PUBLICLY-26112723
[Journal Article] Coupling intercellular molecular signalling with multicellular deformation for simulating three-dimensional tissue morphogenesis2015
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Tadashi Watanabe, Taiji Adachi
- Journal Title
  
  Interface Focus
  
  Volume: 5 Issue: 2 Pages: 20140095-20140095
- DOI
  10.1098/rsfs.2014.0095
- Peer Reviewed
- Data Source
  KAKENHI-PUBLICLY-25127707, KAKENHI-PROJECT-25889070
[Journal Article] Vertex dynamics simulations of viscosity-dependent deformation during tissue morphogenesis2015
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Mototsugu Eiraku, Taiji Adachi, and Yoshiki Sasai
- Journal Title
  
  Biomechanics and Modeling in Mechanobiology
  
  Volume: 14 Issue: 2 Pages: 413-425
- DOI
  10.1007/s10237-014-0613-5
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25889070
[Journal Article] Three-dimensional vertex model for simulating multicellular morphogenesis2015
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, and Taiji Adachi
- Journal Title
  
  Biophysics and Physicobiology
  
  Volume: 12 Issue: 0 Pages: 13-20
- DOI
  10.2142/biophysico.12.0_13
- NAID
  130005094557
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-15K14534
[Journal Article] Mechanics-based Simulations for Understanding Multicellular Tissue Morphogenesis2014
- Author(s)
  奥田覚，井上康博，安達泰治
- Journal Title
  
  Seibutsu Butsuri
  
  Volume: 54 Issue: 1 Pages: 031-034
- DOI
  10.2142/biophys.54.031
- NAID
  130003391400
- ISSN
  0582-4052, 1347-4219
- Language
  Japanese
- Peer Reviewed
- Data Source
  KAKENHI-PUBLICLY-25127707, KAKENHI-PROJECT-25889070
[Presentation] Elasto-plasticity as a key regulator of the progress of morphogenesis2024
- Author(s)
  Satoru Okuda
- Organizer
  Exploring Organoid Design with Microengineering
- Invited
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Elasto-plasticity as a key regulator of the progress of morphogenesis," Exploring Organoid Design with Microengineering2024
- Author(s)
  Satoru Okuda
- Organizer
  Exploring Organoid Design with Microengineering
- Invited
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 器官形成の一方向性を決める上皮組織の力学2023
- Author(s)
  奥田覚
- Organizer
  第11回ソフトマター研究会
- Invited
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] Versatile computational modeling of 3D multicellular dynamics and application to collective cell migration2023
- Author(s)
  Satoru Okuda
- Organizer
  7th NanoLSI Symposium
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] Elastic-Plastic Transition in the Mechanical Response of Ep-ithelium2023
- Author(s)
  Aki Teranishi, Satoru Okuda
- Organizer
  RIKEN BDR Symposium 2023 Transitions in Biological Systems
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Elastic-Plastic Transition in the Mechanical Response of Ep-ithelium2023
- Author(s)
  Aki Teranishi, Satoru Okuda
- Organizer
  RIKEN BDR Symposium 2023 Transitions in Biological Systems
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 生きた三次元組織内部の力学特性を周囲の分子局在と対応づけてマッピングするAFM計測技術の開発2023
- Author(s)
  詩丘伊月、奥田覚
- Organizer
  第46回日本神経科学大会
- Data Source
  KAKENHI-PROJECT-21KK0134
[Presentation] 形態形成を不可逆に進行させる上皮折りたたみの力学的可塑性2023
- Author(s)
  奥田覚
- Organizer
  第61回日本生物物理学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 器官形成の一方向性を決める上皮組織の力学2023
- Author(s)
  奥田覚
- Organizer
  第11回ソフトマター研究会
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Versatile computational modeling of 3D multicellular dynamics and application to collective cell migration2023
- Author(s)
  Satoru Okuda
- Organizer
  7th NanoLSI Symposium
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 形態形成を不可逆に進行させる上皮折りたたみの力学的可塑性2023
- Author(s)
  奥田覚
- Organizer
  第61回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Collective migration of cells as a sheet and cluster in 3D space2022
- Author(s)
  Satoru Okuda
- Organizer
  The 9th World Congress of Biomechanics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 極性化した界面張力が引き起こす多細胞のクラスター運動の力学機構2022
- Author(s)
  奥田覚
- Organizer
  日本機械学会第34回バイオエンジニアリング講演会
- Invited
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 上皮組織の適応的な曲げ特性とその分子制御機構の解明2022
- Author(s)
  寺西亜生, 奥田覚
- Organizer
  日本機械学会 2022年度年次大会
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Mechanical plasticity of epithelium for progressing morphogenesis2022
- Author(s)
  Satoru Okuda
- Organizer
  New Frontiers in Developmental Biology; Celebrating the Diversity of Life
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 組織切片のAFM計測による生きた胚内部の弾性率マッピング2022
- Author(s)
  詩丘伊月, 奥田覚
- Organizer
  第33回バイオフロンティア講演会
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 3Dバーテックスモデルによる上皮層形成の力学機構の解明2022
- Author(s)
  深町崇耶, 奥田覚
- Organizer
  日本機械学会 2022年度年次大会
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 多細胞ダイナミクスの汎用的計算手法： 3Dバーテックスモデルと非保存流体膜モデル2022
- Author(s)
  奥田覚
- Organizer
  ソフトバイオ研究会2022
- Invited
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 組織切片のAFM計測による生きた胚内部の弾性率マッピング2022
- Author(s)
  詩丘伊月, 奥田覚
- Organizer
  第33回バイオフロンティア講演会
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Mechanics of Epithelial Stratification:Numerical Simulations Using a 3D Vertex Model2022
- Author(s)
  Shuya Fukamachi, Satoru Okuda
- Organizer
  The 55th Annual Meeting of the Japanese Society of Developmental Biologists
- Invited
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 界面張力の不均一性・ゆらぎ・非対称性が引き起こす多細胞の集団運動2022
- Author(s)
  奥田覚
- Organizer
  ゆらぎ界面研究会
- Invited
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] Computational simulations of cell and tissue dynamics2022
- Author(s)
  Satoru Okuda
- Organizer
  Computational Biophysics of Atomic Force Microscopy A Lecture-based Workshop
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Single cell-based modeling of multicellular dynamics in three dimensions2022
- Author(s)
  Satoru Okuda
- Organizer
  The 9th World Congress of Biomechanics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Collective migration of cells as a sheet and cluster in 3D space2022
- Author(s)
  Satoru Okuda
- Organizer
  the 9th World Congress of Biomechanics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 極性化した界面張力が引き起こす多細胞のクラスター運動の力学機構2022
- Author(s)
  奥田覚
- Organizer
  日本機械学会第34回バイオエンジニアリング講演会
- Invited
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 上皮組織の適応的な曲げ特性とその分子制御機構の解明2022
- Author(s)
  寺西亜生, 奥田覚
- Organizer
  日本機械学会 2022年度年次大会
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] Mechanical plasticity of epithelium for progressing morphogenesis2022
- Author(s)
  Satoru Okuda
- Organizer
  New Frontiers in Developmental Biology; Celebrating the Diversity of Life
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 界面張力の不均一性・ゆらぎ・非対称性が引き起こす多細胞の集団運動2022
- Author(s)
  奥田覚
- Organizer
  ゆらぎ界面研究会
- Invited
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 3Dバーテックスモデルによる上皮層形成の力学機構の解明2022
- Author(s)
  深町崇耶, 奥田覚
- Organizer
  日本機械学会 2022年度年次大会
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] Mechanical plasticity of epithelium for progressing morphogenesis2022
- Author(s)
  Satoru Okuda
- Organizer
  New Frontiers in Developmental Biology - Celebrating the Diversity of Life
- Data Source
  KAKENHI-PLANNED-22H05170
[Presentation] Computational simulations of cell and tissue dynamics2022
- Author(s)
  Satoru Okuda
- Organizer
  Computational Biophysics of Atomic Force Microscopy A Lecture-based Workshop
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K18749
[Presentation] 多細胞ダイナミクスの汎用的計算手法： 3Dバーテックスモデルと非保存流体膜モデル2022
- Author(s)
  奥田覚
- Organizer
  ソフトバイオ研究会2022
- Invited
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Mechanics of Epithelial Stratification:Numerical Simulations Using a 3D Vertex Model2022
- Author(s)
  Shuya Fukamachi, Satoru Okuda
- Organizer
  The 55th Annual Meeting of the Japanese Society of Developmental Biologists
- Invited
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 三次元多細胞組織のアクティブな機械特性とその適応的な制御機構の理解に向けて2021
- Author(s)
  奥田覚
- Organizer
  日本機械学会第33回バイオエンジニアリング講演会
- Invited
- Data Source
  KAKENHI-PROJECT-20K20958
[Presentation] 幹細胞オルガノイドの形態形成における力学フィードバック機構2021
- Author(s)
  奥田覚
- Organizer
  第60回日本生体医工学会大会
- Invited
- Data Source
  KAKENHI-PROJECT-20K20958
[Presentation] 力学シミュレーションに基づく幹細胞オルガノイド形成機構の理解2021
- Author(s)
  奥田覚
- Organizer
  第20回日本再生医療学会総会
- Invited
- Data Source
  KAKENHI-PUBLICLY-19H04777
[Presentation] 力学シミュレーションに基づく幹細胞オルガノイド形成機構の理解2021
- Author(s)
  奥田覚
- Organizer
  第20回日本再生医療学会総会
- Invited
- Data Source
  KAKENHI-PROJECT-20K20958
[Presentation] 幹細胞オルガノイドの形態形成における力学フィードバック機構2021
- Author(s)
  奥田覚
- Organizer
  第60回日本生体医工学会大会
- Invited
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] 三次元多細胞組織のアクティブな機械特性とその適応的な制御機構の理解に向けて2021
- Author(s)
  奥田覚
- Organizer
  日本機械学会第33回バイオエンジニアリング講演会
- Invited
- Data Source
  KAKENHI-PROJECT-23K20904
[Presentation] Single cell-based mathematical modeling of 3D neuroepithelial formation2020
- Author(s)
  Satoru Okuda
- Organizer
  New Frontier in Neuroscience 2020
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H04777
[Presentation] Strain-triggered mechanical feedback in self-organizing epithelial morphogenesis2020
- Author(s)
  Satoru Okuda
- Organizer
  第58回日本生物物理学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-20K20958
[Presentation] Strain-triggered mechanical feedback in self-organizing epithelial morphogenesis2020
- Author(s)
  Satoru Okuda
- Organizer
  第58回日本生物物理学会年会
- Invited
- Data Source
  KAKENHI-PUBLICLY-19H04777
[Presentation] 細胞脱離を引き起こす上皮シートの力学不安定性に関する解析的理論2019
- Author(s)
  奥田覚
- Organizer
  日本機械学会第32回バイオエンジニアリング講演会
- Data Source
  KAKENHI-PUBLICLY-19H04777
[Presentation] 実器官の多細胞ダイナミクスを解析する汎用三次元バーテックスモデルの開発2017
- Author(s)
  奥田覚，永樂元次
- Organizer
  日本機械学会第29回バイオエンジニアリング講演会
- Place of Presentation
  ウィンク愛知（愛知県名古屋市）
- Data Source
  KAKENHI-PROJECT-15K14534
[Presentation] 多細胞の三次元組織形成シミュレーションのためのアポトーシスの数理モデル化2016
- Author(s)
  奥田覚，井上康博，安達泰治，永樂元次
- Organizer
  日本機械学会第28回バイオエンジニアリング講演会
- Place of Presentation
  東京工業大学（東京都・目黒区）
- Year and Date
  2016-01-09
- Data Source
  KAKENHI-PROJECT-15K14534
[Presentation] Mechanical regulatory mechanism of 3D multicellular dynamics during epithelial invagination2016
- Author(s)
  Satoru Okuda, Mototsugu Eiraku
- Organizer
  The 54th Annual Meeting of the Biophysical Society of Japan
- Place of Presentation
  つくば国際会議場（茨城県つくば市）
- Data Source
  KAKENHI-PROJECT-15K14534
[Presentation] Mechanical regulatory mechanism of 3D multicellular dynamics during optic-cup morphogenesis2016
- Author(s)
  Satoru Okuda, Mototsugu Eiraku
- Organizer
  The 39th Annual Meeting of the Molecular biology Society of Japan
- Place of Presentation
  パシフィコ横浜（神奈川県横浜市）
- Invited
- Data Source
  KAKENHI-PROJECT-15K14534
[Presentation] "Vertex dynamics simulations of viscosity-dependent deformation during 3D multicellular morphogenesis2015
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Mototsugu Eiraku, Taiji Adachi, Yoshiki Sasai
- Organizer
  International Congress of Biorheology and 8th International Conference on Clinical Hemorheology
- Place of Presentation
  Korea University, Korea
- Year and Date
  2015-05-24
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K14534
[Presentation] Versatile modeling of three-dimensional multicellular morphogenesis: application to apically-convex invagination during optic-cup formation2015
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Taiji Adachi, Yoshiki Sasai, Mototsugu Eiraku
- Organizer
  The 26th CDB meeting: Mechanistic Perspectives of Multicellular Organization
- Place of Presentation
  理化学研究所（兵庫県・神戸市）
- Year and Date
  2015-09-08
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K14534
[Presentation] 三次元的な組織の形態形成における多細胞ダイナミクスの力学シミュレーション2013
- Author(s)
  奥田覚，井上康博，永樂元次，笹井芳樹，安達泰治
- Organizer
  日本植物学会第７７回大会
- Place of Presentation
  北海道大学
- Invited
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] 細胞頂端面の収縮性が成長する上皮組織の曲率に及ぼす影響：リバーシブル・ネットワーク・リコネクション・シミュレーションによる検討2013
- Author(s)
  奥田覚，井上康博，永樂元次，笹井芳樹，安達泰治
- Organizer
  日本機械学会2013年度年次大会
- Place of Presentation
  岡山大学
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] hree-dimensional vertex model for biomechanical simulations of multicellular dynamics during tissue morphogenesis2013
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Mototsugu Eiraku, Taiji Adachi, and Yoshiki Sasai
- Organizer
  The 1st Labex INFORM workshop: Quantitative Biology Signaling
- Place of Presentation
  Institut des Etudes Scientifiques de Cargese, Corsica, France
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] Coupling activator-inhibitor system with growth-induced multicellular morphodynamics in 3D
- Author(s)
  Satoru Okuda, Yoshiki Sasai
- Organizer
  Joint Annual Meeting of the Japanese Society for Mathematical Biology and the Society for Mathematical Biology
- Place of Presentation
  Osaka International Convention Center
- Year and Date
  2014-07-28 – 2014-08-01
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] Vertex model for simulating multicellular dynamics during developmental morphogenesis
- Author(s)
  Satoru Okuda, Yoshiki Sasai
- Organizer
  Joint Meeting of the 1st Africa International Biotechnology & Biomedical Conference and the 8th International Workshop on Approaches to Single-Cell Analysis
- Place of Presentation
  Safari Park Hotel, Nairobi, Kenya
- Year and Date
  2014-09-10 – 2014-09-12
- Invited
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] Vertex dynamics model for simulating multicellular tissue deformation during developmental morphogenesis
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Mototsugu Eiraku, Taiji Adachi, and Yoshiki Sasai
- Organizer
  International Symposium of Mechanobiology 2014
- Place of Presentation
  Okayama University
- Year and Date
  2014-05-20 – 2014-05-23
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] Vertex dynamics simulation of multicellular morphodynamics with visco-elastic-plastic large deformation
- Author(s)
  Satoru Okuda, Yasuhiro Inoue, Mototsugu Eiraku, Taiji Adachi, and Yoshiki Sasai
- Organizer
  7th World Congress of Biomechanics
- Place of Presentation
  Hynes Convention Center, Boston,US
- Year and Date
  2014-07-06 – 2014-07-11
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] 多細胞の形態形成における力学機構を明らかにするための三次元バーテックスモデル3D
- Author(s)
  奥田覚，井上康博，永樂元次，笹井芳樹，安達泰治
- Organizer
  第52回日本生物物理学会年会
- Place of Presentation
  札幌コンベンションセンター
- Year and Date
  2014-09-25 – 2014-09-27
- Data Source
  KAKENHI-PROJECT-25889070
[Presentation] Vertex Model for Simulating Mechanics-Based Multicellular Dynamics in 3D
- Author(s)
  Satoru Okuda, Yoshiki Sasai
- Organizer
  The 62nd NIBB Conference "Force in Development"
- Place of Presentation
  NIBB, Japan
- Year and Date
  2014-11-17 – 2014-11-19
- Data Source
  KAKENHI-PROJECT-25889070

1. 岡本和子 (40710265)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
2. EIRAKU Mototsugu (40415097)

# of Collaborated Projects: 1 results

# of Collaborated Products: 7 results
3. MORI Shunsuke (90733147)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. Kondo Takefumi (60565084)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. Sato Katsuhiko (90513622)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 橋本敦史 (80641753)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 梅津大輝 (60620474)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 長井淳 (60892586)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 早野元詞 (30593644)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 柴田達夫 (10359888)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. 藤原裕展 (20615744)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 二階堂愛 (00383290)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 井上康博

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
14. 加藤昌志

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Okuda Satoru 奥田 覚

OKUDA Satoru 奥田 覚

Research Projects

Research Products

Co-Researchers

テレスコープモデルに基づく皮膚付属器官の多様性創発原理の解明とその応用

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多細胞組織の適応的な機械特性によって器官形成が頑強に制御される機構の解明Principal Investigator

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Theoretical understanding of cell-competition by 3D mechanics-based modelingPrincipal Investigator

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Regulatory mechanism of elasticity-mediated neuroplasticity by ECM: AFM measurement of brainPrincipal Investigator

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Theoretical study of self-organization induced by mechanochemical feedback

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核内の粘弾的特性がNanogの転写調節領域の空間的ゆらぎを制御する

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Role of fluctuation in regulating the elastic-plastic property of tissues during organogenesisPrincipal Investigator

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Unraveling the role of peri-synaptic collagen in ageing with protein engineering

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Active mechanical properties of three-dimensional multicellular tissues and their adaptive regulatory mechanismsPrincipal Investigator

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Dynamic fluctuation characteristics of cellular force generations and solid mechanical roles during organogenesisPrincipal Investigator

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Mathematical modeling of brain development: transformation from temporal control of cell differentiation and proliferation to spatial constructionPrincipal Investigator

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Toward understanding of the principle of embryogenesis by an integrated approach of single-cell genomics and mechanics

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Collective migration of epithelial cells: a fundamental mechanics of morphogenesis

Principal Investigator

Project Period (FY)

Okuda Satoru 奥田覚

OKUDA Satoru 奥田覚