ＴＡＭＡＦＬＯＲＥＮＣＥタマフロハンス

… Alternative Names

Researcher Number	20648191
Other IDs	https://orcid.org/0000-0003-2021-5618
Affiliation (Current)	2019: 名古屋大学, 理学研究科, 教授 2019: 国立研究開発法人理化学研究所, 計算科学研究センター, チームリーダー
Affiliation (based on the past Project Information) *help	2016 – 2018: 名古屋大学, 理学研究科, 教授 2015: 名古屋大学, 理学(系)研究科(研究院), 教授 2014: 独立行政法人理化学研究所, 計算科学研究機構, 研究ユニットリーダー
Review Section/Research Field	Principal Investigator Structural biochemistry Except Principal Investigator Complex systems / Biophysics
Keywords	Principal Investigator XFEL / database / single molecules / molecular shapes / 2D images / single-particle / 3D structure Except Principal Investigator 構造解析法 / 電子顕微鏡 / 膜タンパク質 … More

Database of Molecular Shapes and Diffraction Patterns for X-ray Free Electron Laser Data AnalysisPrincipal InvestigatorOngoing
- Principal Investigator
  
  TAMA FLORENCE
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Structural biochemistry
- Research Institution
  Nagoya University
コンピューティングを活用した寄生植物ストライガを抑制する生命機能分子の探索Host Researcher
- Host Researcher
  
  TAMA FLORENCE
- Project Period (FY)
  2017
- Research Category
  
  Grant-in-Aid for JSPS Fellows
- Research Field
  
  Biophysics
- Research Institution
  Nagoya University
動的構造生命科学研究領域における海外ネットワーク形成を目指した支援活動Ongoing
- Principal Investigator
  
  神田大輔
- Project Period (FY)
  2015 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Kyushu University
Molecular dynamics simulations of protein complexes based on multi-resolution modelsOngoing
- Principal Investigator
  
  杉田有治
- Project Period (FY)
  2014 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Institute of Physical and Chemical Research

All 2018 2017 2016 2015 2014 Other

All Journal Article Presentation

[Journal Article] Conformational dynamics of human protein kinase CK2α and its effect on function and inhibition.2018
- Author(s)
  Ashutosh Srivastava, Tsuyoshi Hirota, Stephan Irle and Florence Tama
- Journal Title
  
  Proteins
  
  Volume: 86 Pages: 344-353
- DOI
  10.1002/prot.25444
- Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K07305, KAKENHI-PLANNED-26119006, KAKENHI-PROJECT-15H05590
[Journal Article] Hybrid Approach for Biological Structure Modeling: Cryo-electron Microscopy and X-ray Free Electron Laser Data2017
- Author(s)
  宮下治, タマフロハンス
- Journal Title
  
  生物物理
  
  Volume: 57 Issue: 2 Pages: 090-094
- DOI
  10.2142/biophys.57.090
- Language
  Japanese
- Peer Reviewed / Open Access / Acknowledgement Compliant
- Data Source
  KAKENHI-PLANNED-26119006, KAKENHI-PROJECT-16K07286, KAKENHI-PROJECT-17K07305
[Journal Article] Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations2017
- Author(s)
  Miyashita O, Kobayashi C, Mori T, Sugita Y, Tama F
- Journal Title
  
  J Comput Chem
  
  Volume: 38 Pages: 1447-1461
- DOI
  10.1002/jcc.24785
- Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-26119006, KAKENHI-PROJECT-16K07286
[Journal Article] Hybrid approach for structural modeling of biological systems from X-ray free electron laser diffraction patterns2016
- Author(s)
  Atsushi Tokuhisa, Slavica Jonic, Florence Tama, Osamu Miyashita
- Journal Title
  
  J Struct Biol.
  
  Volume: 194-3 Pages: 325-336
- DOI
  10.1016/j.jsb.2016.03.009
- Acknowledgement Compliant / Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-26870852, KAKENHI-PLANNED-26119006
[Journal Article] Local Thermodynamics of the Water Molecules around Single- and Double-Stranded DNA Studied by Grid Inhomogeneous Solvation Theory2016
- Author(s)
  Nakano M, Tateishi-Karimata H, Tanaka S, Tama F, Miyashita O, Nakano S, and Sugimoto N
- Journal Title
  
  Chem. Phys. Lett.
  
  Volume: 660 Pages: 250-255
- DOI
  10.1016/j.cplett.2016.08.032
- Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-26119006, KAKENHI-PROJECT-16H02283, KAKENHI-PROJECT-26460035, KAKENHI-PROJECT-26810094
[Journal Article] Thermodynamic properties of water molecules in the presence of cosolute depend on DNA structure: a study using grid inhomogeneous solvation theory2015
- Author(s)
  M. Nakano, H. Tateishi-Karimata, S. Tanaka, F. Tama, O. Miyashita, S. Nakano, N. Sugimoto
- Journal Title
  
  Nucleic Acids Res.
  
  Volume: 43 Pages: 10114-10125
- DOI
  10.1093/nar/gkv1133
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-26460035, KAKENHI-PROJECT-26810094, KAKENHI-PLANNED-26119006, KAKENHI-PROJECT-26620138
[Journal Article] Hybrid Electron Microscopy Normal Mode Analysis graphical interface and protocol2014
- Author(s)
  Sorzano CO, de la Rosa-Trevin JM, Tama F, Jonic S.
- Journal Title
  
  J Struct Biol.
  
  Volume: 188 Pages: 134-141
- DOI
  10.1016/j.jsb.2014.09.005
- Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-26119006
[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2018
- Author(s)
  Florence Tama
- Organizer
  Laue Langevin Institute, Grenoble, France
- Invited
- Data Source
  KAKENHI-PROJECT-17K07305
[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2017
- Author(s)
  Florence Tama
- Organizer
  Statistics and Algorithms for Biology, INRA, Toulouse, France
- Invited
- Data Source
  KAKENHI-PROJECT-17K07305
[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2017
- Author(s)
  Tama Florence
- Organizer
  Biophysical Society of Japan
- Invited
- Data Source
  KAKENHI-PLANNED-26119006
[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments. Statistics and Algorithms for Biology2017
- Author(s)
  Tama Florence
- Organizer
  Seminar at INRA, Toulouse, France
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PLANNED-26119006
[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2017
- Author(s)
  Tama Florence
- Organizer
  Seminar at Laue Langevin Institute, Grenoble, France
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PLANNED-26119006
[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2017
- Author(s)
  Florence Tama
- Organizer
  Biophysical Society of Japan Meeting
- Invited
- Data Source
  KAKENHI-PROJECT-17K07305
[Presentation] Hybrid approaches to characterize structure and dynamics of biomolecular systems from single molecule experiments2016
- Author(s)
  Tama Florence
- Organizer
  日本蛋白質科学会
- Place of Presentation
  福岡国際会議場・福岡県福岡市
- Year and Date
  2016-06-07
- Invited
- Data Source
  KAKENHI-PLANNED-26119006
[Presentation] Hybrid approaches to characterize structure and dynamics of biomolecular systems from single molecule experiments2016
- Author(s)
  Tama Florence
- Organizer
  Telluride Workshop
- Place of Presentation
  Telluride Colorado・USA
- Year and Date
  2016-07-25
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PLANNED-26119006
[Presentation] Coarse-Grained Modeling of Structure and Dynamics of Biomacromolecules 3.
- Author(s)
  Osamu Miyashita, Atsushi Tokuhisa, Florence Tama
- Organizer
  Telluride Workshop on Coarse-grained modeling of structure and dynamics of biomolecules, Telluride
- Place of Presentation
  Telluride Science Research Center, Telluride, Collorado, USA
- Year and Date
  2014-08-04 – 2014-08-08
- Invited
- Data Source
  KAKENHI-PLANNED-26119006

1. 杉田有治 (80311190)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
2. 神田大輔 (80186618)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. 安藤敏夫 (50184320)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 白川昌宏 (00202119)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 西田紀貴 (50456183)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 塚崎智也 (80436716)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 甲斐荘正恒 (20137029)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 稲垣冬彦 (70011757)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. RAKERS CHRISTIN

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 田中成典

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
11. 建石寿枝

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
12. 杉本直己

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
13. 廣田毅

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
14. 宮下治

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
15. 徳久淳師

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

ＴＡＭＡ ＦＬＯＲＥＮＣＥ タマ フロハンス

TAMA FLORENCE タマ フロハンス

Research Projects

Research Products

Co-Researchers

Database of Molecular Shapes and Diffraction Patterns for X-ray Free Electron Laser Data AnalysisPrincipal InvestigatorOngoing

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

コンピューティングを活用した寄生植物ストライガを抑制する生命機能分子の探索Host Researcher

Host Researcher

Project Period (FY)

Research Category

Research Field

Research Institution

動的構造生命科学研究領域における海外ネットワーク形成を目指した支援活動Ongoing

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Molecular dynamics simulations of protein complexes based on multi-resolution modelsOngoing

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Conformational dynamics of human protein kinase CK2α and its effect on function and inhibition.2018

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Hybrid Approach for Biological Structure Modeling: Cryo-electron Microscopy and X-ray Free Electron Laser Data2017

Author(s)

Journal Title

DOI

Language

Data Source

[Journal Article] Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations2017

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Hybrid approach for structural modeling of biological systems from X-ray free electron laser diffraction patterns2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Local Thermodynamics of the Water Molecules around Single- and Double-Stranded DNA Studied by Grid Inhomogeneous Solvation Theory2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Thermodynamic properties of water molecules in the presence of cosolute depend on DNA structure: a study using grid inhomogeneous solvation theory2015

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Hybrid Electron Microscopy Normal Mode Analysis graphical interface and protocol2014

Author(s)

Journal Title

DOI

Data Source

[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2018

Author(s)

Organizer

Data Source

[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2017

Author(s)

Organizer

Data Source

[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments2017

Author(s)

Organizer

Data Source

[Presentation] Computational tools to characterize structure and dynamics of biomolecular systems from single molecule experiments. Statistics and Algorithms for Biology2017

Author(s)

Organizer

ＴＡＭＡＦＬＯＲＥＮＣＥタマフロハンス

TAMA FLORENCE タマフロハンス