Horimoto Katsuhisa 堀本勝久

… Alternative Names

Researcher Number	40238803
External Links
Affiliation (Current)	2019: 国立研究開発法人産業技術総合研究所, 生命工学領域, 副研究センター長
Affiliation (based on the past Project Information) *help	2017 – 2019: 国立研究開発法人産業技術総合研究所, 生命工学領域, 副研究センター長 2017: 国立研究開発法人産業技術総合研究所, 創薬分子プロファイリング研究センター, 副研究センター長 2016: 国立研究開発法人産業技術総合研究所, 創薬分子プロファイル研究センター, 副センター長 2015: 国立研究開発法人産業技術総合研究所, 創薬分子プロファイリング研究センター, 副研究センター長 2014: 独立行政法人産業技術総合研究所, 創薬分子プロファイリング研究センター, 副センター長 … More
Review Section/Research Field	Principal Investigator Biological Sciences / 基礎ゲノム科学 Except Principal Investigator Gastroenterology / Basic Section 53010:Gastroenterology-related / Statistical science / 基礎ゲノム科学
Keywords	Principal Investigator ネットワーク / 遺伝子制御 / 遺伝子配置 / ゲノム重複 / グラフィカル・モデル / ゲノム比較 / 遺伝子制御ネットワーク / 統計解析 / ゲノム / Spatial Statistics … More Except Principal Investigator 遺伝子発現 / 治療抵抗性 / C型肝炎ウイルス / 癌 / IL28B / マイクロアレイ / 転写制御 / 腺腫 / 組織特異性 / オルガノイド / 確立モデル / 細胞学 / 自然免疫 / C型肝炎 / Quality Scores / プロテインアレイ / 条件つき検定 / IFN / プロモータ解析 / 肝炎 / グレブナー基底 / 配列度数修正 / TSS-Seq法 / 肝浸潤リンパ球 / 癌予防 / 条件付き検定 / shear stress / 超平面配置 / 肝細胞癌 / 確率モデル / 遺伝子分類 / 大腸癌予防薬 / 非アルコール性脂肪性肝炎 / インターフェロン / トーリックイデアル / 肝内遺伝子発現 / 肝癌 / リン酸化 / マルコフ連鎖モンテカルロ法 / 薬理学 / 血管内皮 / SSA/P / 発生の制御 / ゲノム / 次世代シーケンサー / 転写頻度 / Connectivity map解析 / メチル化 / C型慢性肝炎 Less

NAFLD/NASH肝組織リン酸化活性プロファイリングと新規治療標的分子の同定Ongoing
- Principal Investigator
  
  本多政夫
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 53010:Gastroenterology-related
- Research Institution
  Kanazawa University
Development of chemopreventive agents using Connectivity Map analysisOngoing
- Principal Investigator
  
  高山哲治
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Gastroenterology
- Research Institution
  The University of Tokushima
Identification of biomarkers to predict HCC development after successful treatment of viral hepatitis
- Principal Investigator
  
  HONDA Masao
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Gastroenterology
- Research Institution
  Kanazawa University
Establishment of molecular basis for improving the treatment efficacy of chronic hepatitis C and preventing the occurrence of hepatocellular carcinoma.
- Principal Investigator
  
  HONDA Masao
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Gastroenterology
- Research Institution
  Kanazawa University
Identification of host genes responsible for the treatment response of interferon therapy for the patients with chronic hepatitis C
- Principal Investigator
  
  HONDA Masao
- Project Period (FY)
  2009 – 2011
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Gastroenterology
- Research Institution
  Kanazawa University
グラフィカル・モデルに基づく生命情報からの因果・関連性解析Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2008 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Development of method for evaluating the consistency between network model in the cell and the molecular measured dataPrincipal Investigator
- Principal Investigator
  
  HORIMOTO Katsuhisa
- Project Period (FY)
  2007 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Probabilistic Models of the Marginal Distribution of Gene Expression
- Principal Investigator
  
  HORTON Paul
- Project Period (FY)
  2007 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  National Institute of Advanced Industrial Science and Technology
グラフィカルモデルに基づく相互作用推定法の開発と適用Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Developments of computational algebraic statistics
- Principal Investigator
  
  TAKEMURA Akimichi
- Project Period (FY)
  2006 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Statistical science
- Research Institution
  The University of Tokyo
グラフィカル・ガウシアン・モデルによる相互作用推定法の拡張とその適用Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2005
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
グラフィカル・モデリングに基づく相互作用推定法の確立と適用Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
グラフィカル・モデリングに基づく相互作用推定法の理論的研究と適用Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2003
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Macroscopic Genome Structure Comparison Based on Gene LocationsPrincipal Investigator
- Principal Investigator
  
  HORIMOTO Katsuhisa
- Project Period (FY)
  2003 – 2004
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  The University of Tokyo
遺伝子配置情報に基づいた巨視的ゲノム構造比較法の確立と適用Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2002
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
遺伝子配置情報に基づくゲノム構造比較法の開発と適用Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2001
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  佐賀医科大学
遺伝子配置情報に基づくゲノム構造比較法の開発Principal Investigator
- Principal Investigator
  
  堀本勝久
- Project Period (FY)
  2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  佐賀医科大学

All 2013 2010 2009 2008 2007 2006 2005 Other

All Journal Article Presentation Book

[Book] Symbolic Computation in Biology, Math. Comput. Sci2009
- Author(s)
  Anai, H., Horimoto, K. (eds)
- Data Source
  KAKENHI-PROJECT-19201039
[Book] Bioinformatics for Systems Biology: Second Edition, Introduction to Informatics(In Krawetz, S. (ed))2009
- Author(s)
  Aburatani, S., Saito, S., Horimoto, K
- Publisher
  Humana Press
- Data Source
  KAKENHI-PROJECT-19201039
[Book] Algebraic Biology, Lecture Notes in Computer Science2008
- Author(s)
  Horimoto, K., Regensburger, G., Rosenkranz, M., Yoshida, H. (eds)
- Publisher
  Springer
- Data Source
  KAKENHI-PROJECT-19201039
[Book] Algebraic Biology, Lecture Notes in Computer Science2007
- Author(s)
  Anai, H., Horimoto, K., Kutsia, T. (eds)
- Publisher
  Springer
- Data Source
  KAKENHI-PROJECT-19201039
[Book] Applied statistics for Network Biology: Methods in Systems Biology(F., Dehmer, M., Salvador, A. and Graber, A. (eds))
- Author(s)
  Saito, S., Horimoto, K. : Network Screening
- Publisher
  Wiley(in press)
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Gene expression profiling of hepatitis B- and hepatitis C-related hepatocellular carcinoma using graphical Gaussian modeling2013
- Author(s)
  Ueda T, Honda M, Horimoto K, Aburatani S, Saito S, Yamashita T, Sakai Y, Nakamura M, Takatori H, Sunagozaka H, Kaneko S.
- Journal Title
  
  Genomics
  
  Volume: Apr;101(4) Pages: 238-248
- DOI
  10.1016/j.ygeno.2013.02.007
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23701098, KAKENHI-PROJECT-24390187, KAKENHI-PROJECT-24510285
[Journal Article] Altered Hepatic Gene Expression Profiles Associated with Myocardial Ischemia.2010
- Author(s)
  Ootsuji, H., Honda, M., Takamura, M., Usui, S., Okajima, M., D, Okada, H., Sakai, Y., Takamura, T., Horimoto, K., Kaneko, S
- Journal Title
  
  Circ Cardiovasc Genet 3
  
  Pages: 68-77
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Parameter Optimization in the network dynamics including unmeasured variables by the symbolic-numeric approach.2009
- Author(s)
  Nakatsui, M., Horimoto, K
- Journal Title
  
  Proceedings of the Third International Symposium on Optimization and Systems Biology (OSB'09)
  
  Pages: 245-253
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Co-Expressed Gene Assessment Based on the Path Consistency Algorithm: Operon Detention in Escherichia coli. Proceedings of IEEE International Conference on Systems2009
- Author(s)
  Saito, S., Horimoto, K
- Journal Title
  
  Man and Cybernetics
  
  Pages: 4280-4286
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Period-Phase Map: Two-diemsional Selection of Circadian Rhythm-Related Genes.2009
- Author(s)
  Morioka, R., Arita, M., Sakamoto, K., Kawaguchi, S., Tei, H., Horimoto, K
- Journal Title
  
  IET Sys. Biol 3
  
  Pages: 487-495
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] TRAIL inhibited the cyclic AMP responsible element mediated gene expression.2009
- Author(s)
  Tokumoto, Y., Horimoto, K., Miyake, J
- Journal Title
  
  Biochem. Biophys. Res. Commun 381
  
  Pages: 533-536
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Differential miRNA expression between hepatitis B and hepatitis C leading disease progression to HCC.2009
- Author(s)
  Ura, S., Honda, M., Yamashita, T., Ueda, T., Takatori, H., Nishino, R., Sunagozaka, H., Sakai, Y., Horimoto, K., Kaneko, S
- Journal Title
  
  Hepatology 49
  
  Pages: 1098-1112
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Detection of network structure changes by graphical chain modeling: a case study of hepatitis C virus-related hepatocellular carcinoma.2009
- Author(s)
  Saito, S., Honda, M., Kaneko, S., Horimoto, K
- Journal Title
  
  Proceedings of 48th IEEE Conference on Decision and Control
  
  Pages: 5624-5630
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Symbolic Computation in Biology2009
- Author(s)
  Hirokazu Anai, Katsuhisa Horimoto (eds)
- Journal Title
  
  Math.Comput.Sci. 2
  
  Pages: 399-556
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18200019
[Journal Article] Complementing Networks Using Observed Data.2009
- Author(s)
  Akutsu, T., Tamura, T., Horimoto, K
- Journal Title
  
  Lecture Notes in Artificial Intelligence 5809
  
  Pages: 126-140
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Integer Programming-based Approach to Allocation of Reporter Genes for Cell Array Analysis.2008
- Author(s)
  Hayashida, M., Sun, F., Aburatani, S., Horimoto, K., Akutsu, T
- Journal Title
  
  Int. J. Bioinformatics Research and Applications 4
  
  Pages: 385-399
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Network evaluation from the consistency of the graph structure with the measured data.2008
- Author(s)
  Saito, S., Aburatani, S., Horimoto, K
- Journal Title
  
  BMC Sys. Biol 2
  
  Pages: 84-84
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Analysis of network dynamics including hidden variables by symbolic-numeric approach.2008
- Author(s)
  Tominaga, D., Tokumoto, Y., Nakatsui, M., Sun, F., Miyake, J., Horimoto, K
- Journal Title
  
  Proceedings of the Second International Symposium on Optimization and Systems Biology (OSB'08)
  
  Pages: 242-248
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Phase Shifts of Circadian Transcripts in Rat Suprachiasmatic Nucleus.2008
- Author(s)
  Morioka, R., Arita, M., Sakamoto, K., Kawaguchi, S., Tei, H., Horimoto, K
- Journal Title
  
  Proceedings of the Second International Symposium on Optimization and Systems Biology (OSB'08)
  
  Pages: 109-114
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Revealing Disease Related Interactions by Correlation Analysis.2008
- Author(s)
  Wu, Z.K., Zhang, Z.Y., Zhang, L.W., Horimoto, K
- Journal Title
  
  Proceedings of the Second International Symposium on Optimization and Systems Biology (OSB'08)
  
  Pages: 341-349
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Inference of Probabilities over a Stochastic IL-System by Quantifier Elimination.2008
- Author(s)
  Yoshida, H., Horimoto, K., Anai, H
- Journal Title
  
  Math. Comput. Sci 1
  
  Pages: 473-485
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Identification of novel candidate tumour marker genes for intrahepatic cholangiocarcinoma.2008
- Author(s)
  Nishino, R., Honda, M., Yamashita, T., Takatori, H., Minato, H., Zen, Y., Sasaki, M., Takamura, H., Horimoto, K., Ohta, T., Nakanuma, Y., Kaneko, S
- Journal Title
  
  J. Hepatol 49
  
  Pages: 207-216
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] An Algebraic-Numeric Algorithm for the Model Selection in Network Motifs in Escherichia coli.2008
- Author(s)
  Nakatsui, M., Yoshida, H., Horimoto, K
- Journal Title
  
  Proceedings of the Second International Symposium on Optimization and Systems Biology (OSB'08)
  
  Pages: 257-264
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Time Series Segmentation for Gene Regulatory Process with Time-Window-Extension Technique.2008
- Author(s)
  Zhang, Z.Y., Horimoto, K., Liu, Z
- Journal Title
  
  Proceedings of the Second International Symposium on Optimization and Systems Biology (OSB'08)
  
  Pages: 198-203
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] An Algebraic-Numeric Algorithm for the Model Selection in Kinetic Networks.2007
- Author(s)
  Yoshida, H., Nakagawa, K., Anai, H., Horimoto, K
- Journal Title
  
  Proceedings of 10th CASC, LNCS(Springer, Heidelberg) 4770
  
  Pages: 433-447
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Derivation of rigorous conditions for high cell-type diversity by algebraic approach.2007
- Author(s)
  Yoshida, H., Anai, H., Horimoto, K
- Journal Title
  
  BioSystems 90
  
  Pages: 486-495
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Exact parameter determination for Parkinson's disease diagnosis with PET using an algebraic approach.2007
- Author(s)
  Yoshida, H., Nakagawa, K., Anai, H., Horimoto, K
- Journal Title
  
  Algebraic Biology, Lecture Notes in Computer Science(In Anai, H., Horimoto, K., Kutsia, T. (eds)) 4545
  
  Pages: 110-124
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Integer Programming-based Approach to Allocation of Reporter Genes for Cell Array Analysis.2007
- Author(s)
  Hayashida, M., Sun, F., Aburatani, S., Horimoto, K., Akutsu, T
- Journal Title
  
  Proceedings of 10th OSB, Lecture Notes in Operation Research(Publishing Corporation)
  
  Pages: 288-301
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Gene systems network inferred from expression profiles in hepatocellular carcinogenesis by graphical Gaussian model.2007
- Author(s)
  Aburatani, S., Sun, F., Saito, S., Honda, M., Kaneko, S., Horimoto, K
- Journal Title
  
  EURASIP J. Bioinfo. Systems Biol
  
  Pages: 47214-47214
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Inference of Protein-Protein Interactions by Using Co-evolutionary Information.2007
- Author(s)
  Sato, T., Yamanishi, Y., Horimoto, K., Kanehisa, M., Toh, H
- Journal Title
  
  Algebraic Biology, Lecture Notes in Computer Science(In Anai, H., Horimoto, K. and Kutsia, T. (eds)) 4545
  
  Pages: 322-333
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Algebraic Biology.2007
- Author(s)
  Hirokazu Anai, Katsuhisa Horimoto, Temure Kutsia. (eds)
- Journal Title
  
  Lecture Notes in Computer Science Springer, Heidelberg
  
  Pages: 4545-4545
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18200019
[Journal Article] Gene systems network inferred from expression profiles in hepatocellular carcinogenesis by graphical Gaussian model.2007
- Author(s)
  Sachiyo Aburatani, Fung Sun, Shigeru Saito, Masao Honda, Shuichi Kaneko, Katsuhisa Horimoto.
- Journal Title
  
  EURASIP J.ioinfo. Systems Biol. 2007
  
  Pages: 47214-47214
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18200019
[Journal Article] Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactions2006
- Author(s)
  Sato, T., Yamanishi, Y, Horimoto, K., Kanehisa, M, Toh, H.
- Journal Title
  
  Bioinformatics 22
  
  Pages: 2488-2492
- Data Source
  KAKENHI-PROJECT-18016008
[Journal Article] Symbolic-numeric estimation of parameters in biochemical models by quantifier elimination.2006
- Author(s)
  Anai, H., Orii, S., Horimoto, K
- Journal Title
  
  J. Bioinfo. Comput. Biol. 4
  
  Pages: 1097-1117
- Data Source
  KAKENHI-PROJECT-18016008
[Journal Article] A Graphical Chain Model for Inferring Regulatory System Networks from Gene Expression Profiles.2006
- Author(s)
  Sachiyo Aburatani, Shigeru Saito, Hiroyuki Toh, Katsuhisa Horimoto.
- Journal Title
  
  Statistical Methodology 3
  
  Pages: 17-28
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18200019
[Journal Article] A graphical chain model for inferring regulatory system networks from gene expression profiles.2006
- Author(s)
  Aburatani, S., Saito, S., Toh, H., Horimoto, K.
- Journal Title
  
  Statistical Methodology 3
  
  Pages: 17-28
- Data Source
  KAKENHI-PROJECT-18016008
[Journal Article] Comparison between Profile-Profile Methods based on Hidden Markov Models and Multiple Alignments.2005
- Author(s)
  Sato, M., Horimoto, K.
- Journal Title
  
  Proceedings of the 9th World Multi-Conference on Systemics, Cybernetics and Informatics (印刷中)
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-15310134
[Journal Article] Comparison between Profile-Profile Methods based on Hidden Markov Models and Multiple Alignments.2005
- Author(s)
  Sato, M., Horimoto, K.
- Journal Title
  
  Proceedings of the 9th World Multi-Conference on Systemics, Cybernetics and Informatics (in press)
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-15310134
[Journal Article] Derivation of rigorous conditions for high cell-type diversity by algebraic approach.
- Author(s)
  Yoshida, H., Anai, H., Horimoto, K
- Journal Title
  
  BioSystems (in press)
- Data Source
  KAKENHI-PROJECT-18016008
[Journal Article] Parameter Optimization by Using Differential Elimination: a General Approach for Introducing Constraints into Objective Function.
- Author(s)
  Nakatsui, M., Horimoto, K., Okamoto, M., Tokumoto, Y., Miyake, J
- Journal Title
  
  BMC Sys. Biol (in press)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Journal Article] Gene systems network inferred from expression profiles in hepatocellular carcinogenesis by graphical Gaussian model.
- Author(s)
  5.Aburatani, S., Sun, F., Saito, S., Honda, M., Kaneko, S., Horimoto, K.
- Journal Title
  
  EURASIP J. Bioinfo. Comput. Biol. (in press)
- Data Source
  KAKENHI-PROJECT-18016008
[Journal Article] Brute force meets Bruno force in parameter optimization: Introduction of novel constraints for parameter estimation by symbolic computation.
- Author(s)
  Nakatsu, M., Horimoto, K., Lemaire, F., Urguplu, A., Sedoglavic, A., Boulier, F
- Journal Title
  
  IET Sys. Biol (in press)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Network Screening-Detection of Activated Pathways from the Data Measured in a Finite Condition2009
- Author(s)
  Horimoto, K.
- Organizer
  Computational Systems Biology Workshop
- Place of Presentation
  Shanghai University
- Year and Date
  2009-09-19
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] Detection of network structure changes by graphical chain modeling:a case study of hepatitis C virus-related hepatocellular carcinoma2009
- Author(s)
  Saito, S., Horimoto, K.
- Organizer
  Joint 48th IEEE Conference on Decision and Control and 28th Chinese Control Conference
- Place of Presentation
  Shanghai, China.
- Year and Date
  2009-12-17
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] Detection of network structure changes by graphical chain modeling: a case study of hepatitis C virus-related hepatocellular carcinoma.2009
- Author(s)
  Saito, S., Honda, M., Kaneko, S., Horimoto, K
- Organizer
  48th IEEE Conference on Decision and Control
- Place of Presentation
  China
- Year and Date
  2009-12-17
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Co-Expressed Gene Assessment Based on the Path Consistency Algorithm : Operon Detection in Escherichia coli2009
- Author(s)
  Saito, S., Horimoto, K.
- Organizer
  2009 IEEE International Conference on Systems, Man, and Cybernetics
- Place of Presentation
  San Antonio, Texas, USA.
- Year and Date
  2009-10-14
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Detection of network structure changes by graphical chain modeling : a case study of hepatitis C virus-related hepatocellular carcinoma2009
- Author(s)
  Saito, S., Horimoto, K.
- Organizer
  Joint 48th IEEE Conference on Decision and Control and 28th Chinese Control Conference
- Place of Presentation
  Shanghai, China.
- Year and Date
  2009-12-17
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 遺伝子発現プロファイルによるネットワーク構造評価2009
- Author(s)
  齊藤秀、堀本勝久
- Organizer
  電子情報通信学会
- Place of Presentation
  キャンパスイノベーションセンター(田町)
- Year and Date
  2009-08-06
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] 代数的アプローチと遺伝的アルゴリズムの組み合わせによる計測不能変数を含むネットワークのパラメータ最適化2009
- Author(s)
  中津井雅彦、堀本勝久
- Organizer
  電子情報通信学会
- Place of Presentation
  キャンパスイノベーションセンター(田町)
- Year and Date
  2009-08-06
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] Trace of network structure changes by two approaches2009
- Author(s)
  Horimoto, K.
- Organizer
  ASI Symposium on Bioinformatics and Data Mining
- Place of Presentation
  Hong Kong Baptist University
- Year and Date
  2009-02-26
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] Co-Expressed Gene Assessment Based on the Path Consistency Algorithm: Operon Detention in Escherichia coli.2009
- Author(s)
  Saito, S., Horimoto, K
- Organizer
  IEEE International Conference on Systems, Man and Cybernetics
- Place of Presentation
  USA
- Year and Date
  2009-10-11
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Parameter optimization in network dynamics including unmeasured variables by the symbolic-numeric approach2009
- Author(s)
  Nakatsui, M., Horimoto, K.
- Organizer
  The Third International Symposium on Optimizationand Systems Biology
- Place of Presentation
  Zhangjiajie, Hunan, China
- Year and Date
  2009-09-20
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] Parameter optimization in network dynamics including unmeasured variables by the symbolic-numeric approach2009
- Author(s)
  Nakatsui, M., Horimoto, K.
- Organizer
  The Third International Symposium on Optimization and Systems Biology
- Place of Presentation
  Zhangjiajie, Hunan, China
- Year and Date
  2009-09-20
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Co-Expressed Gene Assessment Based on the Path Consistency Algorithm : Operon Detection in Escherichia coli2009
- Author(s)
  Saito, S., Horimoto, K.
- Organizer
  2009 IEEE International Conference on Systems, Man, and Cybernetics
- Place of Presentation
  San Antonio, Texas, USA.
- Year and Date
  2009-10-14
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] "Network Screening"-Detection of Activated Pathways from the Data Measured in a Finite Condition2009
- Author(s)
  Horimoto, K.
- Organizer
  Computational Systems Biology Workshop
- Place of Presentation
  Shanghai University
- Year and Date
  2009-09-19
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 代数的アプローチと遺伝的アルゴリズムの組み合わせによる計測不能変数を含むネットワークのパラメータ最適化2009
- Author(s)
  中津井雅彦、堀本勝久
- Organizer
  電子情報通信学会
- Place of Presentation
  キャンパスイノベーションセンター(田町)
- Year and Date
  2009-08-06
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Parameter Optimization in the network dynamics including unmeasured variables by the symbolic-numeric approach.2009
- Author(s)
  Nakatsui, M., Horimoto, K
- Organizer
  The Third International Symposium on Optimization and Systems Biology (OSB'09)
- Place of Presentation
  China
- Year and Date
  2009-09-20
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 遺伝子発現プロファイルによるネットワーク構造評価2009
- Author(s)
  齊藤秀、堀本勝久
- Organizer
  電子情報通信学会
- Place of Presentation
  キャンパスイノベーションセンター(田町)
- Year and Date
  2009-08-06
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 進展型疾患のネットワークモデル2008
- Author(s)
  堀本勝久
- Organizer
  医療と情報技術の連携イノベーショフォーラム
- Place of Presentation
  東京大学本郷キャンパス工学部
- Year and Date
  2008-12-02
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Time Series Segmentation for Gene Regulatory Process with Time-Window-Extension Technique.2008
- Author(s)
  Zhang, Z.Y., Horimoto, K., Liu, Z
- Organizer
  The Second International Symposium on Optimization and Systems Biology (OSB'08)
- Place of Presentation
  China
- Year and Date
  2008-10-18
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Revealing Disease Related Interactions by Correlation Analysis.2008
- Author(s)
  Wu, Z.K., Zhang, Z.Y., Zhang, L.W., Horimoto, K
- Organizer
  The Second International Symposium on Optimization and Systems Biology (OSB'08)
- Place of Presentation
  China
- Year and Date
  2008-10-18
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 2つアプローチによる時間発展するネットワーク構造変化解析2008
- Author(s)
  堀本勝久
- Organizer
  BMB2008(第31回日本分子生物学会年会・第81回日本生化学会大会
- Place of Presentation
  神戸ポートピアホテル
- Year and Date
  2008-12-12
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 進展型疾患のネットワークモデル2008
- Author(s)
  堀本勝久
- Organizer
  医療と情報技術の連携イノベーショフォーラム
- Place of Presentation
  東京大学本郷キャンパス工学部
- Year and Date
  2008-12-02
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] 2つアプローチによる時間発展するネットワーク構造変化解析2008
- Author(s)
  堀本勝久
- Organizer
  BMB2008(第31回日本分子生物学会年会・第81回日本生化学会大会
- Place of Presentation
  神戸ポートピアホテル
- Year and Date
  2008-12-12
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] An Algebraic-Numeric Algorithm for the Model Selection in Network Motifs in Escherichia coli.2008
- Author(s)
  Nakatsui, M., Yoshida, H., Horimoto, K
- Organizer
  The Second International Symposium on Optimization and Systems Biology (OSB'08)
- Place of Presentation
  China
- Year and Date
  2008-10-18
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Network Inference and Evaluation Based on Graphical Model.2008
- Author(s)
  Horimoto. K.
- Organizer
  Seminar on Computational Systems Biology
- Place of Presentation
  Shanghai University
- Year and Date
  2008-08-13
- Data Source
  KAKENHI-PROJECT-20016028
[Presentation] Phase Shifts of Circadian Transcripts in Rat Suprachiasmatic Nucleus.2008
- Author(s)
  Morioka, R., Arita, M., Sakamoto, K., Kawaguchi, S., Tei, H., Horimoto, K
- Organizer
  The Second International Symposium on Optimization and Systems Biology (OSB'08)
- Place of Presentation
  China
- Year and Date
  2008-10-18
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Network Inference and Evaluation Based on Graphical Model2008
- Author(s)
  Horimoto, K.
- Organizer
  Seminar on Computational Systems Biology
- Place of Presentation
  Shanghai University
- Year and Date
  2008-08-13
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Analysis of network dynamics including hidden variables by symbolic-numeric approach.2008
- Author(s)
  Tominaga, D., Tokumoto, Y., Nakatsui, M., Sun, F., Miyake, J., Horimoto, K
- Organizer
  The Second International Symposium on Optimization and Systems Biology (OSB'08)
- Place of Presentation
  China
- Year and Date
  2008-10-18
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 創薬・副作用予測にむけた生命分子ネットワーク解析法の開発2007
- Author(s)
  堀本勝久
- Organizer
  日本バイオインフォマティクス学会, JSBi合同研究会
- Place of Presentation
  東京大学医科学研究所
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Inference of Protein-Protein Interactions by Using Co-evolutionary Information2007
- Author(s)
  Sato, T., Yamanishi, Y., Horimoto, K., Kanehisa, M., Toh, H
- Organizer
  Algebraic Biology 2007
- Place of Presentation
  Austria
- Year and Date
  2007-07-02
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Dynamical analysis of biological networks by using reporter gene expressions in transfected cell microarray2007
- Author(s)
  Horimoto, K.
- Organizer
  DMHF2007
- Place of Presentation
  九州大学
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Consistency of causal graph with measured data2007
- Author(s)
  Horimoto, K.
- Organizer
  International Conference on Multiple Decision Theory, Statistical Inference and Applications
- Place of Presentation
  Taiwan Science Academy
- Data Source
  KAKENHI-PROJECT-18016008
[Presentation] 代数生物学一記号計算による生命現象解析2007
- Author(s)
  堀本勝久
- Organizer
  Innovative Mathematical Approaches for Systems Biology:System Identification, Analysis, Control and Design
- Place of Presentation
  九州大学産業技術数理研究センター
- Data Source
  KAKENHI-PROJECT-18016008
[Presentation] Dynamical analysis of biological networks by using reporter gene expreslsions in transfected cell microarray2007
- Author(s)
  Horimoto, K.
- Organizer
  DMHF2007
- Place of Presentation
  九州大学
- Data Source
  KAKENHI-PROJECT-18016008
[Presentation] 代数生物学-記号計算による生命現象解析2007
- Author(s)
  堀本勝久
- Organizer
  Innovative Mathematical Approaches for Systems Biology:System Identification, Analysis, Control and Design
- Place of Presentation
  九州大学産業技術数理研究センター
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Consistency of causal graph with measured data2007
- Author(s)
  Horimoto, K.
- Organizer
  International Conference on Multiple Decision Theory, Statistical Inference and Applications
- Place of Presentation
  Taiwan Science Academy
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] An Algebraic-Numeric Algorithm for the Model Selection in Kinetic Networks.2007
- Author(s)
  Yoshida, H., Nakagawa, K., Anai, H., Horimoto, K
- Organizer
  10th CASC
- Place of Presentation
  Germany
- Year and Date
  2007-09-16
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Exact parameter determination for Parkinson's disease diagnosis with PET using an algebraic approach2007
- Author(s)
  Yoshida, H., Nakagawa, K., Anai, H., Horimoto, K
- Organizer
  Algebraic Biology 2007
- Place of Presentation
  Austria
- Year and Date
  2007-07-02
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] Design of Analysis Toolsfor Network Inference and Evaluation2007
- Author(s)
  Horimoto, K.
- Organizer
  Systems Biology Workshop
- Place of Presentation
  英国大使館
- Data Source
  KAKENHI-PROJECT-18016008
[Presentation] Design of Analysis Tools for Network Inference and Evaluation2007
- Author(s)
  Horimoto, K.
- Organizer
  Systems Biology Workshop
- Place of Presentation
  英国大使館
- Data Source
  KAKENHI-PROJECT-19201039
[Presentation] 創薬・副作用予測にむけた生命分子ネットワーク解析法の開発2007
- Author(s)
  堀本勝久
- Organizer
  日本バイオインフォマティクス学会, JSBi合同研究会
- Place of Presentation
  東京大学医科学研究所
- Data Source
  KAKENHI-PROJECT-18016008

1. 藤博幸 (70192656)

# of Collaborated Projects: 5 results

# of Collaborated Products: 3 results
2. ABURATANI Sachiyo (10361627)

# of Collaborated Projects: 4 results

# of Collaborated Products: 8 results
3. HONDA Masao (00272980)

# of Collaborated Projects: 4 results

# of Collaborated Products: 1 results
4. ANAI Hirokazu (20417520)

# of Collaborated Projects: 3 results

# of Collaborated Products: 10 results
5. YOSHIDA Hiroshi (60401262)

# of Collaborated Projects: 2 results

# of Collaborated Products: 10 results
6. OOSUGI Hidefumi (80350289)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
7. KAMIYA Hidehiko (50300687)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
8. SAI Shidou (30186910)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
9. HIBI Takayuki (80181113)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
10. SAKAI Yoshio (80401925)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
11. TAKEMURA Akimichi (10171670)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. AOKI Satoshi (90332618)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. KURIKI Satoshi (90195545)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. SAKATA Toshio (20117352)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. SHIBUYA MASAAKI (20146723)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. NIKI Naoto (10000209)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. HOSHINO Nobuaki (00313627)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. HONDA Toshio (30261754)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
19. TOMINAGA Daisuke (20357578)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
20. HORTON Paul (00371071)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
21. FUKUCHI Satoshi (70360336)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
22. YAMASHITA Taro (90377432)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
23. SHIMAKAMI Tetsuro (50436820)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
24. 高山哲治 (10284994)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
25. 武藤倫弘 (30392335)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
26. 岡本耕一 (60531374)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
27. 六車直樹 (90325283)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
28. 鍵和田晴美 (40443204)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
29. 砂子阪肇

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Horimoto Katsuhisa 堀本 勝久

HORIMOTO Katsuhisa 堀本 勝久

Research Projects

Research Products

Co-Researchers

NAFLD/NASH肝組織リン酸化活性プロファイリングと新規治療標的分子の同定Ongoing

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Development of chemopreventive agents using Connectivity Map analysisOngoing

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Identification of biomarkers to predict HCC development after successful treatment of viral hepatitis

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Establishment of molecular basis for improving the treatment efficacy of chronic hepatitis C and preventing the occurrence of hepatocellular carcinoma.

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Identification of host genes responsible for the treatment response of interferon therapy for the patients with chronic hepatitis C

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グラフィカル・モデルに基づく生命情報からの因果・関連性解析Principal Investigator

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Development of method for evaluating the consistency between network model in the cell and the molecular measured dataPrincipal Investigator

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Probabilistic Models of the Marginal Distribution of Gene Expression

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グラフィカルモデルに基づく相互作用推定法の開発と適用Principal Investigator

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Developments of computational algebraic statistics

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グラフィカル・ガウシアン・モデルによる相互作用推定法の拡張とその適用Principal Investigator

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グラフィカル・モデリングに基づく相互作用推定法の確立と適用Principal Investigator

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グラフィカル・モデリングに基づく相互作用推定法の理論的研究と適用Principal Investigator

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Horimoto Katsuhisa 堀本勝久

HORIMOTO Katsuhisa 堀本勝久