• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

TATENO MASARU  舘野 賢

ORCIDConnect your ORCID iD *help
… Alternative Names

TATENO Masaru  館野 賢

MASARU Tateno  舘野 賢

Less
Researcher Number 40291926
Affiliation (based on the past Project Information) *help 2013 – 2021: 兵庫県立大学, 生命理学研究科, 教授
2016: 兵庫県立大学, 大学院生命理学研究科, 教授
2015: 兵庫県立大学, 院・生命理学研究科, 教授
2011: 兵庫県立大学, 大学院・生命理学研究科, 教授
2007 – 2010: University of Tsukuba, 大学院・数理物質科学研究科, 准教授 … More
2006: 筑波大学, 大学院数理物質科学研究科, 助教授
2005: 筑波大学, 大学院・数理物質科学研究科, 助教授
2004: 東京工業大学, バイオ研究基盤支援総合センター, 助教授
2003: 独立行政法人産業技術総合研究所, 年齢軸生命工学研究センター, 研究員 Less
Review Section/Research Field
Principal Investigator
Mathematical physics/Fundamental condensed matter physics / Science and Engineering / Living organism molecular science
Except Principal Investigator
Radiation science / Biophysics / Human genetics / Mathematical physics/Fundamental condensed matter physics / Thin film/Surface and interfacial physical properties / Biological Sciences
Keywords
Principal Investigator
タンパク質 / RNA / 酵素反応 / 触媒反応 / 計算科学 / 情報科学 / 生体高分子 / QM / 立体構造 / 電子状態計算 … More / 第一原理分子動力学計算 / ハイブリッド計算 / 分子動力学計算 / 情報科学・計算科学の融合 / 結晶構造のリファインメント解析技術 / GTP加水分解反応メカニズム / 細胞内情報伝達の生体反応 / 自動解析ウェブサービスシステム / 転写制御配列の自動同定システム / ゲノムDNAの高次構造モデル / 生体触媒反応における電子構造のダイナミクス / 核酸 / DNA / 生命物理学 / 量子科学 / 多様体 / ゲノム情報学 / 情報幾何学 / 機械学習 / 情報理論 / 電子構造理論 / 転写制御 / リボザイム / ゲノムDNA / 情報微分幾何学 / パターン認識 / 電子状態理論 / ハイブリッド触媒 / 電子ダイナミクス / バイオインフォマティクス / 構造精密化 / ab initio計算 / 電子密度 / X線結晶構造解析 / 電子構造計算 / MMハイブリッド / 生物機能 / QM/MMハイブリッド / 機能解析 / 第一原理計算 / 分子動力学 / ハイブリッドQM/MM / 電子構造 / MMハイブリッド計算 / 年齢軸生命工学 / 生物情報学 / DNA結合タンパク質 / Age-related Stability Element / 分子構造モデリング / タンパク質・DNA相互作用 / 分子動力学シミュレーション / 量子化学計算 / 分子認識 / 年齢軸 / 構造モデリング / DNA塩基配列 / 転写因子 / 構造生物学 … More
Except Principal Investigator
シトクローム酸化酵素 / 立体構造 / RNA / 酵素反応 / タンパク質 / 触媒反応 / 第一原理分子動力学計算 / ハイブリッド計算 / トランスポーター / 放射性医薬品・造影剤 / イメージング剤 / フッ素化 / In Silico / エストロゲン受容体 / ドッキングシミュレーション / ペプチド骨格 / 計算化学 / 標識 / 18F / クリック反応 / 不斉 / イメージング / グルタミン酸トランスポーター / PET / 電子構造生物学 / 振動分光解析 / ミトコンドリアエネルギー変換 / チトクロム酸化酵素 / 時分割X線構造解析 / 時分割X線構造解析 / ヘムタンパク質 / 膜タンパク質 / プロトンポンプ / 呼吸鎖末端酸化酵素 / ガイドRNA / 活性部位 / デアミナーゼ / 遺伝子修復 / guide RNA / 活性ドメイン / MS2 / RNA editing / Deaminase / メタダイナミクス / 分子動力学計算 / 酸素反応 / 電子構造 / MMハイブリッド計算 / QM / 界面準位 / 量子効果 / 絶縁体 / 界面反応 / ナノ物性 / 金属 / 理論 / 酸化物 / 半導体 / ナノデバイス / 将来デバイス / ナノサイエンス / 界面 / 第一原理計算 / アミドプロトン / ペプチドグループ / プロトン移動 / 電子状態計算 Less
  • Research Projects

    (12 results)
  • Research Products

    (329 results)
  • Co-Researchers

    (22 People)
  •  Development of Glutamate Transporter Imaging Agents for Detection of Neurodegenerative Diseases of the Brain

    • Principal Investigator
      Yamaguchi Hiroshi
    • Project Period (FY)
      2017 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Radiation science
    • Research Institution
      Nagoya University
  •  Development of genetic code restoration by using artificial RNA editing

    • Principal Investigator
      TSUKAHARA Toshifumi
    • Project Period (FY)
      2014 – 2015
    • Research Category
      Grant-in-Aid for Challenging Exploratory Research
    • Research Field
      Human genetics
    • Research Institution
      Japan Advanced Institute of Science and Technology
  •  Studies on the proton pump mechanism of the terminal oxidase by time resolved analyses at the hydrogen atom level resolution

    • Principal Investigator
      Yoshikawa Shinya
    • Project Period (FY)
      2014 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Biophysics
    • Research Institution
      University of Hyogo
  •  Theoretical investigation of reaction fields of biological macromolecular systems based on quantum sciences and mathematical informaticsPrincipal Investigator

    • Principal Investigator
      Tateno Masaru
    • Project Period (FY)
      2013 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Mathematical physics/Fundamental condensed matter physics
    • Research Institution
      University of Hyogo
  •  Development of an integrated structural determination system employing crystallographic diffraction data and ab initio electronic structure calculation of biological macromoleculesPrincipal Investigator

    • Principal Investigator
      TATENO Masaru
    • Project Period (FY)
      2011
    • Research Category
      Grant-in-Aid for Challenging Exploratory Research
    • Research Field
      Mathematical physics/Fundamental condensed matter physics
    • Research Institution
      University of Hyogo
  •  Theoretical analysis of functional mechanisms of biological macromolecules using hybrid quantum mechanics/molecular mechanics molecular dynamics simulationPrincipal Investigator

    • Principal Investigator
      TATENO Masaru
    • Project Period (FY)
      2009 – 2011
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Mathematical physics/Fundamental condensed matter physics
    • Research Institution
      University of Hyogo
      University of Tsukuba
  •  量子ハイブリッド分子動力学法による生体機能の量子デザインPrincipal Investigator

    • Principal Investigator
      舘野 賢
    • Project Period (FY)
      2007 – 2008
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Science and Engineering
    • Research Institution
      University of Tsukuba
  •  電子ダイナミクスに基づく生体分子触媒反応のシミュレーション

    • Principal Investigator
      BOERO Mauro
    • Project Period (FY)
      2007 – 2008
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Mathematical physics/Fundamental condensed matter physics
    • Research Institution
      University of Tsukuba
  •  量子ハイブリッド分子動力学法による生体機能の量子デザインPrincipal Investigator

    • Principal Investigator
      舘野 賢
    • Project Period (FY)
      2006
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Science and Engineering
    • Research Institution
      University of Tsukuba
  •  タンパク質超分子中のプロトン移動機構の電子レベルでの解明

    • Principal Investigator
      BOERO Mauro
    • Project Period (FY)
      2006 – 2007
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      University of Tsukuba
  •  New development of the theories of nano-interfaces and their application to nano-devices

    • Principal Investigator
      SHIRAISHI Kenji
    • Project Period (FY)
      2006 – 2008
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Thin film/Surface and interfacial physical properties
    • Research Institution
      University of Tsukuba
  •  年齢軸制御の分子機構に関する構造生物学的および計算科学的解析Principal Investigator

    • Principal Investigator
      舘野 賢
    • Project Period (FY)
      2003 – 2005
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Living organism molecular science
    • Research Institution
      University of Tsukuba
      Tokyo Institute of Technology
      National Institute of Advanced Industrial Science and Technology

All 2019 2018 2017 2016 2015 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 Other

All Journal Article Presentation Book

  • [Book] Simulated Annealing: Introduction, Applications and Theory (Chapter2 : Use of Simulated Annealing for Biophysical Analyses of Biological Macromolecular Systems)2018

    • Author(s)
      Kang Jiyoung, Takuya Sumi, Hiroshi Yamaguchi, Masaru Tateno
    • Total Pages
      274
    • Publisher
      Nova Science Publishers
    • ISBN
      9781536136746
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Book] Some Applications of Quantum Mechanics2012

    • Author(s)
      Jiyoung Kang, Yohsuhe Hagiwara, Masaru Tateno
    • Publisher
      INTECH
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Book] Recent Applications of Hybrid Ab Initio Quantum Mechanics/Molecular Mechanics Simulations to Biological Macromolecules, In Some Applications of Quantum Mechanics2012

    • Author(s)
      Jiyoung Kang, Yohsuke Hagiwara, and Masaru Tateno
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Book] Recent Applications of Hybrid Ab Initio Quantum Mechanics/Molecular Mechanics Simulations to Biological Macromolecules, In Some Applications of Quantum Mechanics2012

    • Author(s)
      Jiyoung Kang, Yohsuke Hagiwara, and Masaru Tateno
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] Some Applications of Quantum Mechanics2012

    • Author(s)
      Jiyoung Kang, Yohsuke Hagiwara, Masaru Tateno
    • Publisher
      INTECH
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] 密度汎関数理論の発展とマテリアルデザインへの応用2011

    • Author(s)
      萩原陽介, 姜志〓, 舘野賢
    • Publisher
      シュプリンガージャパン
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] 密度汎関数理論の発展とマテリアルデザインへの応用2011

    • Author(s)
      萩原陽介, 姜志怜, 舘野賢
    • Publisher
      シュプリンガージャパン
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] 生体反応の量子ハイブリッド分子動力学シミュレーション,赤井久純,白井光雲編「密度汎関数理論の発展とマテリアルデザインへの応用」2011

    • Author(s)
      萩原陽介, 姜志怜, 舘野賢
    • Publisher
      シュプリンガージャパン
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Book] 密度汎関数理論の発展とマテリアルデザインへの応用(赤井・白井編)2011

    • Author(s)
      萩原陽介, 姜志〓, 舘野賢
    • Publisher
      スプリンガー・ジャパン In press
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] 密度汎関数理論の発展とマテリアルデザインへの応用2011

    • Author(s)
      萩原陽介, 姜志〓, 舘野賢
    • Publisher
      シュプリンガージャパン
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Book] Quantum-theoretical approaches to proteins and nucleic acids : In The Oxford Handbook of Nanoscience and Technology2010

    • Author(s)
      Boero, M. and Tateno, M.
    • Publisher
      Oxford University Press
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] Quantum-theoretical approaches to proteins and nucleic acids : in The Oxford Handbook of Nanoscience and Technology, Volume I : Basic Aspects2010

    • Author(s)
      M.Boero, M.Tateno
    • Total Pages
      50
    • Publisher
      Oxford University Press, New York
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] ハイブリッド型の新しい酵素反応2010

    • Author(s)
      舘野賢
    • Total Pages
      75
    • Publisher
      化学(化学同人)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Book] 計算シミュレーションと分析データ解析2007

    • Author(s)
      舘野 賢(分担執筆)
    • Total Pages
      220
    • Publisher
      丸善出版
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Book] 計算シミュレーションと分析データ解析2007

    • Author(s)
      舘野賢(分担執筆)
    • Total Pages
      220
    • Publisher
      丸善出版
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Book] 計算シミュレーションと分析データ解析2007

    • Author(s)
      舘野賢(分担執筆)
    • Total Pages
      220
    • Publisher
      丸善出版
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Book] Modelling Molecular Structure and Reactivity in Biological Systems2006

    • Author(s)
      M.Boero, M.Tateno
    • Publisher
      RCS Publishing, Cape Town
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Book] Modelling Molecular structure and Reactivity in Biological Systems(RCS Publishing, Cape Town)2006

    • Author(s)
      M.Boero, M.Tateno
    • Publisher
      Investigations of Catalytic Reaction Mechanisms of Biological Macromolecules by Using First Principles and Combined Classical Molecular Dynamics Methods
    • Data Source
      KAKENHI-PROJECT-18036003
  • [Journal Article] Electronic Structure Rearrangements in Hybrid Ribozyme/Protein Catalysis2017

    • Author(s)
      Jiyoung Kang, Hiori Kino, Martin J. Field, and Masaru Tateno
    • Journal Title

      J. Phys. Soc. Jpn.

      Volume: 86 Issue: 4 Pages: 044801-044801

    • DOI

      10.7566/jpsj.86.044801

    • NAID

      210000134350

    • Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Journal Article] Simulated Annealing-Extended Sampling for Multicomponent Decomposition of Spectral Data of DNA Complexed with Peptide2017

    • Author(s)
      Jiyoung Kang, Kazuhiko Yamasaki, Kuniaki Sano, Ken Tsutsui, Kimiko M. Tsutsui, and Masaru Tateno
    • Journal Title

      J. Phys. Soc. Jpn.

      Volume: 86 Issue: 1 Pages: 014802-014802

    • DOI

      10.7566/jpsj.86.014802

    • NAID

      40021057753

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Journal Article] Complex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode2017

    • Author(s)
      Satoru Shimada, Kyoko Shinzawa‐Itoh, Junpei Baba, Shimpei Aoe, Atsuhiro Shimada, Eiki Yamashita, Jiyoung Kang, Masaru Tateno, Shinya Yoshikawa, and Tomitake Tsukihara
    • Journal Title

      EMBO J.

      Volume: 86 Issue: 3 Pages: 291-300

    • DOI

      10.15252/embj.201695021

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-25287099, KAKENHI-PROJECT-26291033, KAKENHI-PROJECT-15K18493
  • [Journal Article] Effects of a Positive Feedback Loop upon the Stability of Bi-connected Elementary Biochemical Reaction Cycle2017

    • Author(s)
      Jiyoung kang, and Masaru Tateno
    • Journal Title

      J. Phys. Soc. Jpn.

      Volume: 印刷中

    • NAID

      40021254431

    • Peer Reviewed / Acknowledgement Compliant
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Journal Article] Novel Strategy for Discrimination of Transcription Factor Binding Motif Employing Mathematical Neural Network2017

    • Author(s)
      Asuka Sugimoto, Takuya Sumi, Jiyoung Kang, and Masaru Tateno
    • Journal Title

      J. Phys. Soc. Jpn.

      Volume: 印刷中

    • NAID

      210000134453

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Journal Article] Unidirectional mechanistic valved mechanisms for ammonia transport in GatCAB2012

    • Author(s)
      Jiyoung Kang, Yohsuke Hagiwara, Masaru Tateno
    • Journal Title

      J.Chem.Theory Comp.

      Volume: 8 Issue: 2 Pages: 649-649

    • DOI

      10.1021/ct200387u

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-10J02555, KAKENHI-PROJECT-21340108
  • [Journal Article] Biological applications of hybrid quantum mechanics/molecular mechanics calculation2012

    • Author(s)
      Jiyoung Kang, Yohsuke Hagiwara, Masaru Tateno
    • Journal Title

      J.Biomed.Biotech.

      Volume: 2012 Pages: 236157-236157

    • DOI

      10.1155/2012/236157

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-10J02555, KAKENHI-PROJECT-21340108, KAKENHI-PROJECT-23654129
  • [Journal Article] コンピュータ・シミュレーションによる生体触媒反応機構の研究2011

    • Author(s)
      姜志〓, 萩原陽介, 舘野賢
    • Journal Title

      応用物理

      Volume: 80 Pages: 610-614

    • NAID

      10029101681

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] コンピュータ・シミュレーションによる生体触媒反応機構の研究2011

    • Author(s)
      萩原陽介, 姜志〓, 舘野賢
    • Journal Title

      応用物理

      Volume: In press

    • NAID

      10029101681

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] A theoretical investigation of the functional role of the axial methionine ligand of the CU_A site in cytochrome c oxidase2011

    • Author(s)
      Jiyoung Kang, Hiori Kino, Masaru Tateno
    • Journal Title

      Biochim.Biophys.Acta Bioenerg.

      Volume: 1807 Issue: 10 Pages: 1314-1314

    • DOI

      10.1016/j.bbabio.2011.06.014

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-10J02555, KAKENHI-PROJECT-21340108, KAKENHI-PROJECT-23654129
  • [Journal Article] コンピュータ・シミュレーションによる生体触媒反応機構の研究2011

    • Author(s)
      姜志怜, 萩原陽介, 舘野賢
    • Journal Title

      応用物理

      Volume: 第80券,第7号 Pages: 610-14

    • NAID

      10029101681

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Journal Article] Theoretical Exploration of Stability and Steepness of Algebraic Steady State Equations Describing Kinetics of Elementary Cellular Reaction Cycles2011

    • Author(s)
      Tatsunori Nishimura, Masaru Tateno
    • Journal Title

      J.Phys.Soc.Jpn

      Volume: 80

    • NAID

      40018787439

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Structural Instability of the Active Site of T1 Lipase Induced by Replacement of Na^+ with Water Complexed with the Phenylalanine Aromatic Ring2011

    • Author(s)
      Yohsuke Hagiwara, Jiyoung Kang, Masaru Tateno
    • Journal Title

      J.Chem.Theory Comp.

      Volume: 7 Issue: 8 Pages: 2593-2593

    • DOI

      10.1021/ct100752y

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-10J02555, KAKENHI-PROJECT-21340108, KAKENHI-PROJECT-23654129
  • [Journal Article] コンピュータ・シミュレーションによる生体触媒反応機構の研究2011

    • Author(s)
      姜志怜, 萩原陽介, 舘野賢
    • Journal Title

      応用物理

      Volume: 第80券,第7号 Pages: 610-14

    • NAID

      10029101681

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Theoretical Exploration of Stability and Steepness of Algebraic Steady State Equations Describing Kinetics of Elementary Cellular Reaction Cycles2011

    • Author(s)
      T.Nishimura M.Tateno
    • Journal Title

      J.Phys.Soc.Jpn

      Volume: In press

    • NAID

      40018787439

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] コンピュータ・シミュレーションによる生体触媒反応機構の研究2011

    • Author(s)
      姜志〓, 萩原陽介, 舘野賢
    • Journal Title

      応用物理

      Volume: 80 Pages: 610-614

    • NAID

      10029101681

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Journal Article] Recent advances in jointed quantum mechanics and molecular mechanics calculations of biological macromolecules schemes and applications cupled to abinitio calculations2010

    • Author(s)
      Y.Hagiwara, M.Tateno
    • Journal Title

      J.Phys : Cond.Mat.

      Volume: 22 Pages: 413101-413101

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Recent advances in jointed quantum mechanics and molecular mechanics calculations of biological macromolecules : schemes and applications coupled to ab initio calculations2010

    • Author(s)
      Hagiwara, Y. and Tateno, M.
    • Journal Title

      J. Phys. Cond. Matt.

      Volume: 22 Issue: 41 Pages: 152101-152101

    • DOI

      10.1088/0953-8984/22/41/413101

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Modulation of electronic structures of bases through DNA recognition of protein2010

    • Author(s)
      Hagiwara, Y., Kino, H., and Tateno, M.
    • Journal Title

      J. Phys. Cond. Mat.

      Volume: 22 Pages: 152101-152101

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] ハイブリッド型の新しい酵素反応2010

    • Author(s)
      舘野賢
    • Journal Title

      化学(化学同人)

      Volume: 65 Pages: 75-75

    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Editing mechanism of aminoacyl-tRNA synthetases operates by a hybrid ribozyme/protein catalyst2010

    • Author(s)
      Hagiwara, Y., Field, M. J., Nureki, O., and Tateno, M.
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 132 Issue: 8 Pages: 2751-58

    • DOI

      10.1021/ja9095208

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Evaluation of stabilization energies in M. M and cation. M interactions involved in biological macromolecules by ab initio calculations2009

    • Author(s)
      Tateno, M. and Hagiwara, Y.
    • Journal Title

      J. Phys. Cond. Matt.

      Volume: 21 Issue: 6 Pages: 64243-64243

    • DOI

      10.1088/0953-8984/21/6/064243

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Evaluation of Electronic and Geometrical Properties of the Blue Copper Site in Fully Solvated Azurin by QM/MM Hybrid Calculations Using a New Interface Program Connecting QM and MM Engine2009

    • Author(s)
      Ohta, T., Hagiwara, Y., Kang, J., and Tateno, M.
    • Journal Title

      J. Comp. Theor. Nanosci.

      Volume: 6 Issue: 12 Pages: 2648-55

    • DOI

      10.1166/jctn.2009.1329

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Electronic and geometric structures of the blue copper site of azurin investigated by QM/MM hybrid calculations2009

    • Author(s)
      Kang, J., Ohta, T., Hagiwara, Y., (3-person), and Tateno, M.
    • Journal Title

      J. Phys. Cond. Matt.

      Volume: 21 Issue: 6 Pages: 64235-64235

    • DOI

      10.1088/0953-8984/21/6/064235

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Evaluation of stabilization energies in π-πand cation-π interactions involved in biological macromolecules by ab initio calculations2009

    • Author(s)
      Tateno, M. and Y. Hagiwara, Y.
    • Journal Title

      J. Phys.: Cond. Mat. 21

      Pages: 64243-64243

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] Functional roles of a structural element involving Na^+-πA interactions in the catalytic site of T1 lipase revealed by molecular dynamics simulations2009

    • Author(s)
      Hagiwara, Y., Matsumura, M., and Tateno, M.
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 13 Issue: 46 Pages: 16697-705

    • DOI

      10.1021/ja903451b

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Evaluation of stabilization energies in π-π and cation-n interactions involved in biological macromolecules by ab initio calculations2009

    • Author(s)
      Tateno, M. and Y. Hagiwara, Y.
    • Journal Title

      J. Phys. : Cond. Mat. 21

      Pages: 64243-64243

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] A First-Principle Exploration of Heme a and Heme a3 of the Bovine Cytochrome c Oxidase in Reduced and Oxidized Charge States2009

    • Author(s)
      Boero, M., Kang, J., Tokumoto, S., and Tateno, M.
    • Journal Title

      J. Comp. Theor. Nanosc.

      Volume: 6 Issue: 12 Pages: 2640-47

    • DOI

      10.1166/jctn.2009.1328

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Identification of the nucleophilic factors and the productive complex for the editing reaction by leucyl-tRNA synthetase2009

    • Author(s)
      Hagiwara, Y., Nureki, O., and Tateno, M.
    • Journal Title

      FEBS Letters

      Volume: 583 Issue: 12 Pages: 1901-8

    • DOI

      10.1016/j.febslet.2009.05.026

    • NAID

      120007131537

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] A novel computational scheme for accurate and efficient evaluation of M. M and M. N stacking2009

    • Author(s)
      Hagiwara, Y. and Tateno, M.
    • Journal Title

      J. Phys. Cond. Matt.

      Volume: 21 Issue: 24 Pages: 64243-64243

    • DOI

      10.1088/0953-8984/21/24/245103

    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] Structural modelling of the complex of leucyl-tRNA synthetase and mis-aminoacylated tRNALeu2009

    • Author(s)
      Hagiwara, Y., Nureki, O., and Tateno, M.
    • Journal Title

      FEBS Letters

      Volume: 583 Issue: 4 Pages: 825-830

    • DOI

      10.1016/j.febslet.2009.01.049

    • NAID

      120007138356

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] QM/MM hybrid calculation of biological macromolecules using new interface program connecting QM and MM engines2009

    • Author(s)
      Hagiwara, Y. and Tateno, M.
    • Journal Title

      J. Phys. Cond. Matt.

      Volume: 21 Issue: 6 Pages: 64234-64234

    • DOI

      10.1088/0953-8984/21/6/064234

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Journal Article] 第一原理計算が明らかにする生体反応の精巧な仕組み2008

    • Author(s)
      舘野 賢, ボエロ マウロ
    • Journal Title

      生物物理 (印刷中)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] Structures and evolutionary origins of plant-specific transcription factor DNA binding domains2008

    • Author(s)
      Yamasaki, K.・Kigawa, T.・Inoue, M.・Watanabe, S.・Tateno, M, et. al.
    • Journal Title

      Plant. Physiol. Biochem. 46

      Pages: 394-401

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Journal Article] 第一原理計算が明らかにする生体反応の精巧な仕組み2008

    • Author(s)
      舘野賢,Boero Mauro
    • Journal Title

      生物物理(日本生物物理学会) 48

      Pages: 216-220

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] Structures and evolutionary origins of plant-specific transcription factor DNA binding domains2008

    • Author(s)
      Yamasaki, K., Kigawa, T., Inoue, M., Watanabe, S., Tateno, M., et. al.
    • Journal Title

      Plant.Physiol.Biochem. 46

      Pages: 394-401

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] Structures and evolutionary origins of plant-specific transcription factor DNA binding domains2008

    • Author(s)
      Yamasaki, K., Kigawa, T., Inoue, M., Watanabe, S., Tateno, M., et. al.
    • Journal Title

      Plant. Physiol. Biochem. 46

      Pages: 394-401

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] 第一原理計算が明らかにする生体反応の精巧な仕組み2008

    • Author(s)
      舘野賢, 他
    • Journal Title

      生物物理(日本生物物理学会) 48

      Pages: 216-220

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] First-Principles Molecular Dynamics Study of Proton Transfer Mechanism in Bovine Cytochrome c Oxidase.2007

    • Author(s)
      Kamiya, K., Boero, M., Tateno M., Shiraishi, K., and Oshiyama, A.
    • Journal Title

      Journal of Physics 19

      Pages: 365220-365220

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] Possible mechanism of proton transfer through peptide groups in the H-pathway of the Bovine cytochrome c oxidase.2007

    • Author(s)
      Kamiya, K.・Boero, M.・Tateno, M.・Shiraishi, K.・Oshiyama, A.
    • Journal Title

      J.Ame.Chem.Soc. 129

      Pages: 9663-9663

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] First Principles Molecular Dynamics Study of Catalytic Reactions of Biological Macromolecular Systems: Toward Analyses with QM/MM Hybrid Molecular Simulations.2007

    • Author(s)
      Boero, M., Park, J. M., Hagiwara, Y., and Tateno, M.
    • Journal Title

      Journal of Physics 19

      Pages: 365217-365217

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] First Principles Molecular Dynamics Study of Catalytic Reactions of Biological Macromolecular System: Toward Analyses with QM/MM Hybrid Molecular Simulations.2007

    • Author(s)
      Boero, M.・Park, J.m.・Hagiwara, Y.・Tateno, M.
    • Journal Title

      Journal of Physics 19

      Pages: 365217-365217

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Journal Article] RNAによる酵素反応の機構…量子力学に基づくシミュレーションが創る「量子構造生物学」への序2007

    • Author(s)
      舘野 賢, ボエロ マウロ
    • Journal Title

      化学と工業 60-6

      Pages: 587-589

    • NAID

      10019487683

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] First-Principles Molecular Dynamics Study of Proton Transfer Mechanism in Bovine Cytochromec Oxidase.2007

    • Author(s)
      Kamiya, K.・Boero, M.・Tateno, M.・Shiraishi, K.・Oshiyama, A.
    • Journal Title

      Journal of Physics 19

      Pages: 365220-365220

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Journal Article] Possible mechanism of proton transfer through peptide groups in the H-pathway of the Bovine cytochrome c oxidase.2007

    • Author(s)
      Kamiya, K.・Boero, M.・Tateno, M.・Shiraishi, K.・Oshiyama, A.
    • Journal Title

      J. Ame. Chem. Soc. 129

      Pages: 9663-9663

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Journal Article] RNAによる酵素反応の機構…量子力学に基づくシミュレーションが創る「量子構造生物学」への序2007

    • Author(s)
      舘野 賢, ボエロ マウロ
    • Journal Title

      化学と工業 60-6

      Pages: 587-589

    • NAID

      10019487683

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] Possible mechanism of proton transfer through peptide groups in the H-pathway of the Bovine cytochrome c oxidase.2007

    • Author(s)
      Kamiya, K., Boero, M., Tateno M., Shiraishi, K., and Oshiyama, A.
    • Journal Title

      J. Ame. Chem. Soc. 129

      Pages: 9663-9663

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] First Principles Molecular Dynamics Study of Catalytic Reactions of Biological Macromolecular Systems : Toward Analyses with QM/MM Hybrid Molecular Simulations2007

    • Author(s)
      Boero, M., Park, J.M., Hagiwara, Y., Tateno, M.
    • Journal Title

      Journal of Physics (印刷中)

    • Data Source
      KAKENHI-PROJECT-18036003
  • [Journal Article] First principles Molecular Dynamics Study of Catalytic Reactions of Biological Macromolecular System:Toward Analyses with QM/MM Hybrid molecular Simulations.2007

    • Author(s)
      Boero, M., Park, J.M., Hagiwara, y., and Tateno, M.
    • Journal Title

      Journal of Physics Cond. Mat. 19

      Pages: 365217-365217

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] First-Principles Molecular Dynamics Study of Proton Transfer Mechanism in Bovine Cytochrome c Oxidase2007

    • Author(s)
      Kamiya, K., Boero, M., Tateno M., Shiraishi, K., Oshiyama, A.
    • Journal Title

      Journal of Physics (印刷中)

    • Data Source
      KAKENHI-PROJECT-18036003
  • [Journal Article] First-Principles Molecular Dynamics Study of Proton Transfer Mechanism in Bovine Cytochrome C Oxidase.2007

    • Author(s)
      Kamiya, K., Boero, M., TatenoM., Shiraishi, K., and Oshiyama, A.
    • Journal Title

      Journal of Physics Cond.Mat. 19

      Pages: 365220-365220

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Journal Article] RNAによる酵素反応の機構--量子力学に基づくシミュレーションが創る「量子構造生物学」への序2007

    • Author(s)
      舘野, 賢・ボエロ, マウロ
    • Journal Title

      化学と工業 Jun-60

      Pages: 587-589

    • NAID

      10019487683

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Journal Article] Solution structure and DNA-binding mode of the matrix attachment region-binding domain of the transcription factor SATB1 that regulates the T-cell maturation2006

    • Author(s)
      Yamaguchi, H., Tateno, M., Yamasaki, K.
    • Journal Title

      J.Biol.Chem. 281

      Pages: 5319-5319

    • Data Source
      KAKENHI-PROJECT-15710172
  • [Journal Article] Double-metal-ion/single-metal-ion mechanisms of the cleavage reaction of ribozymes : First-principles molecular dynamics simulations of a fully hydrated model system2005

    • Author(s)
      Boero, M., Tateno, M., Terakura, K., Oshiyama, A.
    • Journal Title

      J.Chem.Theor. and Comp 1

      Pages: 925-925

    • Data Source
      KAKENHI-PROJECT-15710172
  • [Journal Article] Solution Structure of an Arabidopsis WRKY DNA-Binding Domain2005

    • Author(s)
      Yamasaki, K., Kigawa, T., Inoue, M., Tateno, M., et al.
    • Journal Title

      Plant Cell 17

      Pages: 1-1

    • Data Source
      KAKENHI-PROJECT-15710172
  • [Journal Article] Neutral-particle emission in collisions of electrons with biomolecular ions in an electrostatic storage ring2005

    • Author(s)
      Tanabe, T., Noda, K., Starikov, Erick B., Tateno, M.
    • Journal Title

      Journal of Physics 4

      Pages: 239-239

    • Data Source
      KAKENHI-PROJECT-15710172
  • [Journal Article] A novel ab initio identification system of transcriptional regulation motifs in genome DNA sequences based on direct comparison scheme of signal/noise distributions

    • Author(s)
      Ryo Nakaki, Jiyoung Kang, and Masaru Tateno
    • Journal Title

      Nucleic Acids Research

      Volume: (in press)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Journal Article] 第一原理計算が明らかにする生体反応の精巧な仕組み

    • Author(s)
      舘野 賢, ボエロ マウロ
    • Journal Title

      生物物理 (印刷中)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Journal Article] 第一原理計算が明らかにする生体反応の精巧な仕組み

    • Author(s)
      舘野, 賢・ボエロ, マウロ
    • Journal Title

      生物物理 (印刷中)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Journal Article] A novel ab initio identification system of transcriptional regulation motifs in genome DNA sequences based on direct comparison scheme of signal/noise distributions

    • Author(s)
      Nakaki, R., Kang, J., Tateno, M.
    • Journal Title

      Nucleic Acids Res

      Volume: (in press)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] PET薬剤の開発研究紹介 ~GLTイメージング剤開発を例に~2019

    • Author(s)
      山口博司, 山城敬一, 軽尾友紀子, 表雅章, 舘野賢
    • Organizer
      第9回フッ素化学若手の会
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Structural design and synthesis of glutamate transporter 18F-PET Imaging agent2019

    • Author(s)
      Hiroshi Yamaguchi, Takuya Sumi, JiYoung Kang, Keiichi Yamashiro, Maki Okada, Masaru Tateno
    • Organizer
      International Conference on Fluorine Chemistry 2019 Himeji
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] 計算化学手法を用いたグルタミン酸トランスポーター結合薬剤の設計とPETイメージング剤への応用2019

    • Author(s)
      山口博司, 山城敬一, 岡田真希, 軽尾友紀子, 表雅章, 舘野賢
    • Organizer
      第4回トランスポーター研究会関東部会
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Rational design of imaging drug as PET probe specific to glutamate transporter2019

    • Author(s)
      Jiyoung Kang, Ryu-ichiro Terada, Hidekazu Yasusato, Takuya Sumi, Hiroshi Yamaguchi, Masaru Tateno
    • Organizer
      International Conference on Fluorine Chemistry 2019 Himeji
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Development of imaging agents specific to GLT excluding the off-target binding.2018

    • Author(s)
      Hiroshi Yamaguchi, Takuya Sumi, Jiyoung Kang, Maki Okada, Keiichi Yamashiro, Masaru Tateno
    • Organizer
      第58回日本核医学会学術総会
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Study on introduction of PET nuclides into glutamate transporter inhibitor.2018

    • Author(s)
      Hiroshi Yamaguchi, Takuya Sumi, Jiyoung Kang, Keiichi Yamashiro, Masaru Tateno
    • Organizer
      12th Congress of the World Federation of Nuclear Medicine and Biology
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Development of imaging agent for glutamic acid transporter by off-target exclusion using computational chemical method.2018

    • Author(s)
      Hiroshi Yamaguchi, Takuya Sumi, Jiyoung Kang, Maki Okada, Keiichi Yamashiro, Masaru Tateno
    • Organizer
      European Association of Nuclear Medicine 2018
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Study of Introduction PET Nuclide 18F to Glutamate Transporter Inhibitors In Silico Binding Assay and Synthesis of Derivatives Derived from Tamoxifen and Tetrahydrobenzopyran2017

    • Author(s)
      Hiroshi Yamaguchi, Takuya Sumi, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 8th International Meering on Halogen Chemistry
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Applicability augmented by extending of sampling space in molecular docking simulation for drug design2017

    • Author(s)
      Takuya Sumi, Jiyoung Kang, Ryuichiro Terada, Hiroshi Yamaguchi, and Masaru Tateno
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical study of editing reaction mechanism by the complex of valyl-tRNA synthetase and the mis-aminoacylated tRNAVal2017

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, and Masaru Tateno
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development of Imaging Agents for Glutamine Transporter: In silico Binding Assay and Synthesis of Derivatives Derived from Tamoxifen and Tetrahydrobenzopyran2017

    • Author(s)
      Hiroshi Yamaguchi, Takuya Sumi, Jiyoung Kang, Keiichi Yamashiro, Maki Okada, Masaru Tateno, Katsuhiko Kato, Ming-Rong Zhang, Hirohisa Watanabe, Gen Sobue
    • Organizer
      22nd International Symposium on Radiopharmaceutical Sciences
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Genome-wide identification of broad-range diverse sequence motifs of topoisomerase IIβ operating sites2017

    • Author(s)
      Asuka Sugimoto, Jiyoung Kang, Kakeru Sakabe, Takuya Sumi, and Masaru Tateno
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] 臨床研究を目指したグルタミン酸トランスポーター阻害剤へのPET核種18F導入検討2017

    • Author(s)
      山口博司,山城敬一,鷲見拓哉,Jiyoung Kang,舘野賢
    • Organizer
      第40回フッ素化学討論会
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] 18F-PET薬剤の開発研究から臨床検査応用まで2017

    • Author(s)
      山口博司,山城敬一,鷲見拓哉,Jiyoung Kang,舘野賢
    • Organizer
      第7回フッ素化学若手の会
    • Data Source
      KAKENHI-PROJECT-17K10357
  • [Presentation] Structural and thermodynamic mechanisms of selectivity and cooperativity in recognition of supercoiled DNA-recognition (SDR) peptide and crossover DNA2017

    • Author(s)
      Hiroshi Nishigami, Jiyoung Kang, Kakeru Sakabe, Kuniaki Sano, Kimiko M. Tsutsui, Ken Tsutsui, Kazuhiko Yamasaki, Masaru Tateno
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Dynamical rearrangements of electronic structure in editing reaction by hybrid ribozyme/protein catalyst2017

    • Author(s)
      Jiyoung Kang and Masaru Tateno
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Electronic structure analysis of O2-tolerance mechanisms of hydrogenase by hybrid ab initio quantum mechanics/molecular mechanics simulation2017

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, and Masaru Tateno
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical analysis of dynamical mechanisms of ligand recognition by cytochrome c oxidase2017

    • Author(s)
      Ryuichiro Terada, Jiyoung Kang, Kakeru Sakabe, and Masaru Tateno
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development of novel strategy for discrimination of transcription factor binding motifs (TFBMs) employing mathematical neural network2017

    • Author(s)
      Masaru Tateno, Asuka Sugimoto, Takuya Sumi, Kakeru Sakabe, and Jiyoung Kang
    • Organizer
      2016 Leading Program Evaluation Conference
    • Place of Presentation
      Center for Advanced Science and Technology Hyogo (CAST)
    • Year and Date
      2017-03-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid ab initio quantum mechanics analysis of O2-binding to the CuB-Fea3 binuclear center of cytochrome c oxidase2016

    • Author(s)
      Ryuichiro Terada, Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 16th Annual Meeting of the Protein Science Society of Japan
    • Place of Presentation
      Fukuoka International Congress Center
    • Year and Date
      2016-07-07
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel extended sampling method for multivariate analysis calculation of experimental big data in biochemistry and bioinformatics2016

    • Author(s)
      Jiyoung Kang, Kazuhiko Yamasaki, and Masaru Tateno
    • Organizer
      The 16th Annual Meeting of the Protein Science Society of Japan
    • Place of Presentation
      Fukuoka International Congress Center
    • Year and Date
      2016-07-07
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical Analysis of Dynamical Mechanisms of Ligand-recognition by Cytochrome c Oxidase Employing Hybrid ab initio Quantum Mechanics/Molecular Mechanics Molecular Dynamics Simulation2016

    • Author(s)
      Jiyoung Kang, Ryuichiro Terada, Masaru Tateno
    • Organizer
      BIT’s 7th Annual Global Congress of Catalysis-2016
    • Place of Presentation
      KINTEX, Goyang, Korea
    • Year and Date
      2016-06-30
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Investigation of Oxygen Tolerance Mechanism of Membrane-bound Hydrogenase with use of ab initio Electronic Structure Calculation2016

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      BIT’s 7th Annual Global Congress of Catalysis-2016
    • Place of Presentation
      KINTEX, Goyang, Korea
    • Year and Date
      2016-06-30
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Molecular dynamics docking simulation to elucidate selective binding mechanisms of supercoiled-DNA recognition (SDR) peptide and spatially-crossover DNA2016

    • Author(s)
      Hiroshi Nishigami, Kakeru Sakabe, Jiyoung Kang, Kuniaki Sano, Kimiko Tsutsui, Ken Tsutsui, Kazuhiko Yamasaki, and Masaru Tateno
    • Organizer
      The 39th Annual Meeting of The Molecular Biology Society of Japan
    • Place of Presentation
      Pacifico Yokohama
    • Year and Date
      2016-11-30
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Computational study of solvated structure of the complex of valyl-tRNA synthetase (ValRS) and the mis-aminoacylated tRNAVal (oral)2016

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Structural modeling of initial ES complex of topoisomerase IIB and target DNA employing molecular dynamics simulation2016

    • Author(s)
      Kakeru Sakabe, Hiroshi Nishigami, Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 39th Annual Meeting of The Molecular Biology Society of Japan
    • Place of Presentation
      Pacifico Yokohama
    • Year and Date
      2016-11-30
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Structure of complex of cytochrome c and cytochrome c oxidase shows the novel protein-protein interaction style2016

    • Author(s)
      Shimada S, Shinzawa-Itoh K, Baba J, Aoe S, Shimada A, Yamashita E, Kang J, Tateno M, Yoshikawa S, Tsukihara T
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Data Source
      KAKENHI-PROJECT-26291033
  • [Presentation] Dynamical mechanisms of structural transitions acting as functional switch induced by the ligand binding in cytochrome c oxidase2016

    • Author(s)
      Ryuichiro Terada, Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 39th Annual Meeting of The Molecular Biology Society of Japan
    • Place of Presentation
      Pacifico Yokohama
    • Year and Date
      2016-11-30
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm designed for identification of widely-diverse sequence motifs recognized by topoisomerase IIB2016

    • Author(s)
      Asuka Sugimoto, Jiyoung Kang, Yuhya Takahashi, Kakeru Sakabe, Mary Miuyaji, , Kimiko M. Tsutsui, Ken Tsutsui, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Computational docking study of glutamate transporter and drugs2016

    • Author(s)
      Takuya Sumi, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Enhancement of sampling space in multivariate analysis of experimental big data in various biological sciences2016

    • Author(s)
      Jiyoung Kang, Kazuhiko Yamasaki, and Masaru Tateno
    • Organizer
      The 54th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Tsukuba International Congress Center
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] ab initio electronic structure calculation of proximal cluster in membrane bound hydrogenases (MBH)2016

    • Author(s)
      Jaehyun Kim、Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 16th Annual Meeting of the Protein Science Society of Japan
    • Place of Presentation
      Fukuoka International Congress Center
    • Year and Date
      2016-07-07
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development and application on informatical system for identification of functional structure in eukaryotic genomes2016

    • Author(s)
      Yuhya Takahashi, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid ab initio quantum mechanics/molecular mechanics simulation of ligand binding to Cu-Fe binuclear center of cytochrome c oxidase2016

    • Author(s)
      Ryuichiro Terada, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for efficiently-extended sampling in multivariate analysis of biochemical and bioinformatical experimental data2016

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development and Application of Algorithms to Identify Functionally-Clustered Genes in Eukaryotic Genomes2016

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, and Masaru Tateno
    • Organizer
      5th Informatics in Biology Medicine and Pharmacology
    • Place of Presentation
      東京国際交流館プラザ平成(東京お台場)
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Computational study of solvated structure of the complex of valyl-tRNA synthetase (ValRS) and the mis-aminoacylated tRNAVal (poster)2016

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Identification of optimal parameter values in ligand-receptor docking calculation to extend applicability2016

    • Author(s)
      Takuya Sumi, Hiroshi Yamaguchi, Ryuichiro Terada, Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 54th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Tsukuba International Congress Center
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical investigation of electronic structure of frontier orbitals of proximal cluster responsible for electron transfer from catalytic center to proximal cluster in membrane-bound hydrogenase (MBH) (poster)2016

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Enhancement of spectral curve sampling in multivariate analysis of experimental big data of various biological sciences2016

    • Author(s)
      Jiyoung Kang and Masaru Tateno
    • Organizer
      5th Informatics in Biology Medicine and Pharmacology
    • Place of Presentation
      東京国際交流館プラザ平成(東京お台場)
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Structure of complex of cytochrome c and cytochrome c oxidase shows the novel protein-protein interaction style2016

    • Author(s)
      Satoru Shimada, Shinpei Aoe, Kyoko Shinzawa-Itoh, Jumpei Baba, Atsuhiro Shimada, Jiyoung Kang, Masaru Tateno, Eiki Yamashita, Shinya Yoshikawa, and Tomitake Tsukihara
    • Organizer
      The 16th Annual Meeting of the Protein Science Society of Japan
    • Place of Presentation
      Fukuoka International Congress Center
    • Year and Date
      2016-07-07
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical investigation of electronic structure of frontier orbitals of proximal cluster responsible for electron transfer from catalytic center to proximal cluster in membrane-bound hydrogenase (MBH) (oral)2016

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical analysis of catalytic reaction mechanism in cytidine deaminase that is responsible for RNA editing2016

    • Author(s)
      Takashi Taniguchi, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 3rd Annual Evaluation Conference of the Leading Program, University of Hyogo for the school year of 2015
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2016-03-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Functional Mechanisms of Biological Macromolecular Systems Revealed by Hybrid ab initio Quantum Mechanics Molecular Dynamics2016

    • Author(s)
      Masaru Tateno
    • Organizer
      BIT’s 7th Annual Global Congress of Catalysis-2016
    • Place of Presentation
      KINTEX, Goyang, Korea
    • Year and Date
      2016-06-30
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Broad-range applicability of molecular docking calculation of ligand and receptor by optimizing configurational and conformational sampling spaces2016

    • Author(s)
      Takuya Sumi, Hiroshi Yamaguchi, Ryuichiro Terada, Jiyoung Kang, and Masaru Tateno
    • Organizer
      5th Informatics in Biology Medicine and Pharmacology
    • Place of Presentation
      東京国際交流館プラザ平成(東京お台場)
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Proton transfer mechanisms in photosystem II : hybrid ab inito quantum mechanics study2016

    • Author(s)
      Atsushi Nakamura, Jiyoung Kang, Yasufumi Umena, Keisuke Kawakami, Jian-Ren Shen, Nobuo Kamiya, and Masaru Tateno
    • Organizer
      The 16th Annual Meeting of the Protein Science Society of Japan
    • Place of Presentation
      Fukuoka International Congress Center
    • Year and Date
      2016-07-07
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Complex structure of cytochrome c and cytochrome c oxidase shows a novel inter-protein interaction mode.2016

    • Author(s)
      Shimada S, Shinzawa-Itoh K, Baba J, Aoe S, Shimada A, Yamashita E, Kang J, Tateno M, Yoshikawa S, Tsukihara T
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-26291033
  • [Presentation] Stability of Bi-Connected Elementary Reaction Loop (bc-ERL) Involving Positive Feed-Back Loop2016

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      International School and Conference on Networks Science, NetSci 2016,
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2016-05-30
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Complex structure of cytochrome c and cytochrome c oxidase shows a novel inter-protein interaction mode2016

    • Author(s)
      Satoru Shimada, Kyoko Shinzawa-Itoh, Junpei Baba, Shimpei Aoe, Atsuhiro Shimada, Eiki Yamashita, Jiyoung Kang, Masaru Tateno, Shinya Yoshikawa, and Tomitake Tsukihara
    • Organizer
      The 54th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Tsukuba International Congress Center
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid ab initio molecular dynamical simulation of cytochrome c oxidase: Mechanisms of structural changes by dynamical ligand recognition2016

    • Author(s)
      Ryuichiro Terada, Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 54th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Tsukuba International Congress Center
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hydrogenase : ab initio quantum mechanics study of oxygen-tolerance mechanism2016

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 54th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Tsukuba International Congress Center
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Extended applicability of molecular docking simulation for ligand design by optimizing configurational and conformational sampling spaces2016

    • Author(s)
      Takuya Sumi, Hiroshi Yamaguchi, Ryuichiro Terada, Jiyoung Kang, and Masaru Tateno
    • Organizer
      The 39th Annual Meeting of The Molecular Biology Society of Japan
    • Place of Presentation
      Pacifico Yokohama
    • Year and Date
      2016-11-30
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Molecular dynamics docking study on selective binding mechanisms of supercoiled-DNA recognition (SDR) peptide and spatially-crossover DNA2016

    • Author(s)
      Hiroshi Nishigami, Kakeru Sakabe, Jiyoung Kang, Kuniaki Sano, Kimiko Tsutsui, Ken Tsutsui, Kazuhiko Yamasaki, and Masaru Tateno
    • Organizer
      The 54th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Tsukuba International Congress Center
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Identification of initial ES complex of topoisomerase IIβ and target DNA employing molecular dynamics docking simulation2016

    • Author(s)
      Kakeru Sakabe, Hiroshi Nisihigami, Jiyoung Kang, Masaru Tateno
    • Organizer
      The 54th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Tsukuba International Congress Center
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid ab initio QM/MM molecular dynamics study of catalytic reaction of cytidine deaminase2016

    • Author(s)
      Masaru Tateno, Jiyoung Kang, Takashi Taniguchi, and Kakeru Sakabe
    • Organizer
      The 16th Annual Meeting of the Protein Science Society of Japan
    • Place of Presentation
      Fukuoka International Congress Center
    • Year and Date
      2016-07-07
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for protein-protein docking based on identification of interfacial hydrogen bond network2015

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel strategy for genome-wide identification of widely-diverse transcriptional regulation motifs (oral)2015

    • Author(s)
      Asuka Sugimoto, Jiyoung Kang, Yuhya Takahashi, Mary Miuyaji, Ryohei Furuta, Kuniaki Sano, Kimiko M. Tsutsui, Ken Tsutsui, Masaru Tateno
    • Organizer
      生命医薬情報学連合大会2015年大会
    • Place of Presentation
      京都大学宇治キャンパスおうばくプラザ(京都府宇治市)
    • Year and Date
      2015-10-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for identification of gene clusters in whole genome DNA sequences (oral)2015

    • Author(s)
      Yuhya Takahashi, Jiyoung Kang, Masaru Tateno
    • Organizer
      生命医薬情報学連合大会2015年大会
    • Place of Presentation
      京都大学宇治キャンパスおうばくプラザ(京都府宇治市)
    • Year and Date
      2015-10-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Structural modeling of supercoiled DNA recognition peptide complexed wth crossover DNA2015

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Kazuhiko Yamasaki, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development of structural analysis system of protein-protein complexes based on identification of hydrogen bond network s2015

    • Author(s)
      Jiyoung Kang, Takuya Takeda, Masaru Tateno
    • Organizer
      生命医薬情報学連合大会2015年大会
    • Place of Presentation
      京都大学宇治キャンパスおうばくプラザ(京都府宇治市)
    • Year and Date
      2015-10-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid quantum molecular dynamics study of mechanisms of ligand recognition by bovine cytochrome c oxidase2015

    • Author(s)
      Jiyoung Kang, Toru Matsuoka, Masaru Tateno
    • Organizer
      第38回日本分子生物学会年会 第88回日本生化学大会 2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical investigation of biological mechanisms based on quantum mechanical and information mathematical sciences (oral)2015

    • Author(s)
      Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Identification of topoisomerase IIB recognition motifs using novel scheme designed for that of widely-diverse sequences2015

    • Author(s)
      Asuka Sugimoto, Jiyoung Kang, Yuhya Takahashi, Kakeru Sakabe, Mary Miuyaji, , Kimiko M. Tsutsui, Ken Tsutsui, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Proton transfer mechanisms of photosystem II : Hybrid ab initio quantum mechanics study2015

    • Author(s)
      Atsushi Nakamura, Jiyoung Kang, Yasufumi Umena, Keisuke Kawakami, Jian-Ren, Nobuo Kamiyama, Masaru Tateno
    • Organizer
      第53回生物物理学会年会 2015
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Proton transfer mechanisms in photosystem II : hybrid ab initio quantum mechanics study2015

    • Author(s)
      Atushi Nakamura, Jiyoung Kang, Yasufumi Umena, Keisuke Kawakami, Jian-Ren, Nobuo Kamiyama, Masaru Tateno
    • Organizer
      第38回日本分子生物学会年会 第88回日本生化学大会 2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for identification of gene clusters in whole genome DNA sequences (poster)2015

    • Author(s)
      Yuhya Takahashi, Jiyoung Kang, Masaru Tateno
    • Organizer
      生命医薬情報学連合大会2015年大会
    • Place of Presentation
      京都大学宇治キャンパスおうばくプラザ(京都府宇治市)
    • Year and Date
      2015-10-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Improvements and applications of hybrid ab initio quantum mechanics/molecular mechanics molecular dynamics simulation of biological macromolecular systems (poster)2015

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Masaru Tateno
    • Organizer
      Science and Business 2nd Joint Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-10-22
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Effects of hydroxide ligand in proximal cluster of membrane bound hydrogenases (MBH) (poster)2015

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      第38回日本分子生物学会年会 第88回日本生化学大会 2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel theoretical scheme for analysis of functional mechanism of biological systems based on identification of information flow modulated by Maxwell's deamon2015

    • Author(s)
      Takuya Sumi, Jiyoung Kang, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical analysis of proton transfer mechanisms of photosystem II employing hybrid quantum molecular dynamics simulation2015

    • Author(s)
      Atsushi Nakamura, Jiyoung Kang, Yasufumi Umena, Keisuke Kawakami, Shen Jian-Ren, Nobuo Kamiyama, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for protein-protein docking based on identification of interfacial hydrogen bond network2015

    • Author(s)
      Masaru Tateno, Takuya Takeda, Jiyoung Kang
    • Organizer
      第38回日本分子生物学会年会 第88回日本生化学大会 2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Improvements and applications of hybrid ab initio quantum mechanics/molecular mechanics molecular dynamics simulation of biological macromolecular systems (oral)2015

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Masaru Tateno
    • Organizer
      Science and Business 2nd Joint Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-10-22
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for identification of gene clusters in eukaryotic genome DNA2015

    • Author(s)
      Yuhya Takahashi, Jiyoung Kang, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for identification of gene clusters in whole genome DNA sequences by combining rigorous and heuristic schemes (oral)2015

    • Author(s)
      Yuhya Takahashi, Jiyoung Kang, Masaru Tateno
    • Organizer
      第53回生物物理学会年会 2015
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Structural modeling of negatively supercoiled DNA recognition peptide with crossover DNA (oral)2015

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Masaru Tateno
    • Organizer
      第53回生物物理学会年会 2015
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Structural modeling of negatively-supercoiled DNA recognition peptide complexed with crossover DNA2015

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Kazuhiko Yamasaki, Kuniaki Sano, Kimiko M. Tsutsui, Ken Tsutsui, Masaru Tateno
    • Organizer
      第38回日本分子生物学会年会 第88回日本生化学大会 2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Computational study of dynamical mechanism of substrate dislocation in binuclear center of cytochrome c oxidase2015

    • Author(s)
      Ryuichiro Terada, Jiyoung Kang, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical identification of electronic structures responsible for proton-transfer-coupled-electron-transfer between proximal cluster and cluster and catalytic center in membrane bound hydrogenases2015

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      3rd International Picobiology Institute Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-12-08
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development of structural analysis system of protein-protein complexes based on identification of hydrogen bond network (oral)2015

    • Author(s)
      Masaru Tateno, Takuya Takeda, Jiyoung Kang
    • Organizer
      第53回生物物理学会年会 2015
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Effects of hydroxide ligand in proximal cluster of membrane bound hydrogenases (MBH) (oral)2015

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      第38回日本分子生物学会年会 第88回日本生化学大会 2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel strategy for genome-wide identification of widely-diverse transcriptional regulation motifs (poster)2015

    • Author(s)
      Asuka Sugimoto, Jiyoung Kang, Yuhya Takahashi, Mary Miuyaji, Ryohei Furuta, Kuniaki Sano, Kimiko M. Tsutsui, Ken Tsutsui, Masaru Tateno
    • Organizer
      生命医薬情報学連合大会2015年大会
    • Place of Presentation
      京都大学宇治キャンパスおうばくプラザ(京都府宇治市)
    • Year and Date
      2015-10-29
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Mechanisms of selection of channel for substrate transport in GatCAB (oral)2015

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      第53回生物物理学会年会 2015
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for identification of gene clusters in whole genome DNA sequences2015

    • Author(s)
      Yuhya Takahashi, Jiyoung Kang, Masaru Tateno
    • Organizer
      第38回日本分子生物学会年会 第88回日本生化学大会 2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Electronic structures responsible for proton transfer coupled electron transfer between proximal cluster and catalytic center in membrane bound hydrogenases (MBH) (oral)2015

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      Science and Business 2nd Joint Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-10-22
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Electronic structures responsible for proton transfer coupled electron transfer between proximal cluster and catalytic center in membrane bound hydrogenases (MBH) (poster)2015

    • Author(s)
      Jaehyun Kim, Jiyoung Kang, Masaru Tateno
    • Organizer
      Science and Business 2nd Joint Symposium
    • Place of Presentation
      先端科学技術センター(兵庫県赤穂郡)
    • Year and Date
      2015-10-22
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development and application of ab initio identification system of transcription factor binding motif in genome-wide data2014

    • Author(s)
      Yuya Takahashi, Jiyoung Kang, Kim Kyoung-tark, Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Is allosteric mechanism really required for cooperative O2 affinity of human adult haemoglobin ?2014

    • Author(s)
      Tetsuhiko Itagaki, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel computational scheme for structural determination of multiple conformational segments of biological macromolecules employing crystallographic electron density data in low resolution regions2014

    • Author(s)
      Kiyohito Kihira, Jiyoung Kang, Hiroshi Nishigami, Masaru Tateno, Tomitake Tsukihara
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development and application of novel algorithm for protein-protein docking simulation based on intermolecular hydrogen-bond networks2014

    • Author(s)
      Takuya Takeda, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Functional mechanism of bovine cytochrome c oxidase (II) -- Dynamical mechanism of ligand recognition2014

    • Author(s)
      Toru Matsuoka, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Dynamical mechanism of catalysis by complex of oncogenic product Ras and Ras-GAP2014

    • Author(s)
      Masaru Tateno, Tetsuhiko Itagaki, Jiyoung Kang
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Catalytic mechanism of complex of valyl-tRNA synthetase and mis-aminoacylated tRNA2014

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical and computational investigations of functional mechanisms of biological macromolecules2014

    • Author(s)
      Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Invited
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] 生命の計算科学: そのターゲットは?2014

    • Author(s)
      Masaru Tateno
    • Organizer
      第2回放射光と計算科学の研究会
    • Place of Presentation
      姫路じばさんびる (兵庫県姫路市南駅前町)
    • Invited
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Cation-π vs. Water-π : Theoretical evaluation of structural stability of the active center of T1 lipase and identification of a novel protein structural element2014

    • Author(s)
      Atsushi Nakamura, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Functional mechanism of bovine cytochrome c oxidase (I) -- Double-stratified architecture of CuA site for electron transfer2014

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      International Picobiology Institute Symposium
    • Place of Presentation
      理化学研究所・放射光科学総合研究センター (兵庫県佐用郡佐用町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel computational system for protein-protein docking simulation using the intermolecular hydrogen-bond networks2013

    • Author(s)
      Takuya Takeda, Jiyoung Kang, Kazushi Kitta, Masaru Tateno
    • Organizer
      日本バイオインフォマティクス学会2013年年会&第2回生命医薬情報学連大会
    • Place of Presentation
      タワーホール船堀 (東京都江戸川区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid quantum mechanics (QM) / molecular mechanics (MM) molecular dynamics (MD) simulation of catalytic mechanism by complex of Ras and Ras-GAP: Full description of catalytic mechanisms2013

    • Author(s)
      Masaru Tateno, Tetsuhiko Itagaki, Jiyoung Kang
    • Organizer
      International Conference on Molecular Simulation 2013
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Modulation mechanism of oxygen affinity of human adult hemoglobin through novel pathways for structural propagation in T/R transition revealed by multiple molecular dynamics simulations2013

    • Author(s)
      Tetsuhiko Itagaki, Jiyoung Kang, Masaru Tateno
    • Organizer
      第86回日本生化学会年会
    • Place of Presentation
      パシィフィコ横浜 (横浜市西区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical analysis of binding modes of CO ligand bound to the CuB site of bovine cytochrome c oxidase by using ab initio calculations2013

    • Author(s)
      Toru Matsuoka, Jiyoung Kang, Masaru Tateno
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      とりぎん文化会館 (鳥取市尚徳町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical Investigation of Catalytic Mechanisms of Biological Macromolecules: Toward Development of a Novel scheme for Molecular Design2013

    • Author(s)
      Masaru Tateno
    • Organizer
      Annual International Conference of Medichem
    • Place of Presentation
      Haikou (中国)
    • Invited
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Full description of reaction mechanism of GTP hydrolysis by complex of Ras and Ras-GAP revealed by hybrid quantum mechanics / molecular mechanics molecular dynamics simulations2013

    • Author(s)
      Masaru Tateno, Tetsuhiko Itagaki, Jiyoung Kang
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for protein-protein docking simulation on the basis of intermolecular hydrogen-bond networks2013

    • Author(s)
      Takuya Takeda, Jiyoung Kang, Kazushi Kitta, Masaru Tateno
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid Catalysis of Protein and RNA Enzyme2013

    • Author(s)
      Masaru Tateno
    • Organizer
      Annual Global Congress of Catalysis
    • Place of Presentation
      Dalian (中国)
    • Invited
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Dynamical mechanisms of ligand recognition of bovine cytochrome c oxidase: theoretical analysis using hybrid quantum mechanics / molecular mechanics (QM/MM) molecular dynamics (MD) simulation2013

    • Author(s)
      Toru Matsuoka, Jiyoung Kang, Masaru Tateno
    • Organizer
      第86回日本生化学会年会
    • Place of Presentation
      パシィフィコ横浜 (横浜市西区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid QM/MM simulation of bovine cytochrome c oxidase (II): Dynamical mechanisms of ligand recognition2013

    • Author(s)
      Toru Matsuoka, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Conference on Molecular Simulation 2013
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Dynamical enzymatic mechanisms of GTP hydrolysis by complex of oncogenic product Ras and Ras-GAP: hybrid quantum mechanics / molecular mechanics molecular dynamics simulations2013

    • Author(s)
      Masaru Tateno, Jiyoung Kang, Kyoung-Tark Kim
    • Organizer
      第86回日本生化学会年会
    • Place of Presentation
      パシィフィコ横浜 (横浜市西区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] MODIC2: ab initio identification system of transcription factor binding motifs in genome-wide data2013

    • Author(s)
      Yuya Takahashi, Jiyoung Kang, Kyoung-tark Kim, Masaru Tateno
    • Organizer
      第86回日本生化学大会
    • Place of Presentation
      パシィフィコ横浜 (横浜市西区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Unidirectional mechanistic valve for substrate transport in GatCAB revealed by multiple molecular dynamics simulations2013

    • Author(s)
      Masaru Tateno, Jiyoung Kang,
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      とりぎん文化会館 (鳥取市尚徳町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Multiple molecular dynamics simulations of human adult haemoglobin: Novel intra-molecular signal propagation pathways for nonlinear response in ligand-binding,2013

    • Author(s)
      Tetsuhiko Itagaki, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Conference on Molecular Simulation 2013
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Catalytic mechanisms by Ras:hybrid quantum mechanics/molecular mechanics molecular dynamics simulations of the complex with the GAP2013

    • Author(s)
      Takuya Takeda, Tetsuhiko Itagaki, Jiyoung Kang, Masaru Tateno
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      とりぎん文化会館 (鳥取市尚徳町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Modulation mechanism of oxygen affinity of human adult hemoglobin: Novel structural propagation pathways in T/R transition identified by multiple molecular dynamics simulations2013

    • Author(s)
      Tetsuhiko Itagaki, Jiyoung Kang, Masaru Tateno
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Biochemical and structural basis of epigenetic regulation: dynamical catalytic mechanism of HhaI DNA methyltransferase revealed by quantum mechanics/molecular mechanics molecular dynamics simulations2013

    • Author(s)
      Jiyoung Kang and Masaru Tateno
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      パシィフィコ横浜 (横浜市西区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development and evaluation of a novel ab initio identification system of transcription factor binding motifs in genome DNA sequences2013

    • Author(s)
      Masaru Tateno, Ryu Nakaki and Jiyoung Kang
    • Organizer
      日本バイオインフォマティクス学会2013年年会&第2回生命医薬情報学連合大会
    • Place of Presentation
      タワーホール船堀 (東京都江戸川区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel structural determination scheme of multiple conformational segments of biological macromolecules employing crystallographic electron density data in low-angle/low-resolution regions2013

    • Author(s)
      Kiyohito Kihira, Jiyoung Kang, Hiroshi Nishigami, Masaru Tateno, Tomitake Tukihara
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Cation-π vs. Water-π : Theoretical analysis of structural stability of the active center of T1 lipase employing a novel accurate and efficient description of effective potential2013

    • Author(s)
      Atsushi Nakamura, Jiyoung Kang, Masaru Tateno
    • Organizer
      International Conference on Molecular Simulation 2013
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development and application of ab initio transcription factor binding motif finder from genome-wide data2013

    • Author(s)
      Yuya Takahashi, Jiyoung Kang, Kyoung-tark Kim, Masaru Tateno
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical study of catalytic mechanism of M. HhaI DNA methyltransferase using hybrid quantum mechanics molecular dynamics simulations2013

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] 量子と情報による生命の理解2013

    • Author(s)
      Masaru Tateno
    • Organizer
      第25回 異分野交流研究会
    • Place of Presentation
      アーバンエース三宮ビル (兵庫県神戸市中央区)
    • Invited
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical study of functional role of axial methionine ligand of CuA site in cytochrome c oxidases2013

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      とりぎん文化会館 (鳥取市尚徳町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Dynamical analysis of catalytic reaction of complex of valyl-tRNA synthetase and its cognate tRNA using hybrid ab initio quantum mechanics molecular dynamics simulation2013

    • Author(s)
      Kakeru Sakabe, Jiyoung Kang, Masaru Tateno
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] A novel algorithm for structural determination of multiple conformational segments in biological macromolecules employing electron density data involved in small scattering-angle regions2013

    • Author(s)
      Kiyohito Kihira, Jiyoung Kang, Hiroshi Nishigami, Masaru Tateno, Tomitake Tsukihara
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      パシィフィコ横浜 (横浜市西区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical analysis of fully-hydrated structures of human adult hemoglobin employing multiple molecular dynamics simulations2013

    • Author(s)
      Tetsuhiko Itagaki, Jiyoung Kang, Masaru Tateno
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      とりぎん文化会館 (鳥取市尚徳町)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid QM/MM simulation of bovine cytochrome c oxidase (I) : Double-stratified architecture for electron transfer2013

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      International Conference on Molecular Simulation 2013
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel structural determination algorithm of multiple conformational segments of biological macromolecules employing crystallographic electron density data in low-angle/low-resolution regions2013

    • Author(s)
      Jiyoung Kang, Kiyohito Kihira, Hiroshi Nishigami, Masaru Tateno and Tomitake Tsukihara
    • Organizer
      日本バイオインフォマティクス学会2013年年会&第2回生命医薬情報学連合大会
    • Place of Presentation
      タワーホール船堀 (東京都江戸川区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel computational system for protein-protein docking simulation based on informatical extensive search of intermolecular hydrogen bond networks2013

    • Author(s)
      Takuya Takeda, Jiyoung Kang, Kazushi Kitta, Masaru Tateno
    • Organizer
      第86回日本生化学会年会
    • Place of Presentation
      パシィフィコ横浜 (横浜市西区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Hybrid quantum molecular dynamics study of structural changes of bovine cytochrome c oxidase induced by ligand-binding,2013

    • Author(s)
      Toru Matsuoka, Jiyoung Kang, Masaru Tateno
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場 (兵庫県神戸市中央区)
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] A computational study of functional role of axial methionine ligand of Cu_A site in cytochro me c oxidase2011

    • Author(s)
      Jiyoung Kang, Masaru Tateno
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス(兵庫県)
    • Year and Date
      2011-09-17
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] Improvement of a parameter-tuning-free identification system of transcriptional factor binding sites in genome DNA sequences2011

    • Author(s)
      Ryo Nakaki, Masaru Tateno
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス(兵庫県)
    • Year and Date
      2011-09-16
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] 生きているタンパク質:スーパーコンピュータで生命を知る2011

    • Author(s)
      舘野賢
    • Organizer
      日本生物物理学会・市民公開講座
    • Place of Presentation
      姫路
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Improvement of an automatic identification algorithm of transcription factor binding sites in genome DNA sequences coupled to ChIP-data2011

    • Author(s)
      Ryo Nakaki, Masaru Tateno
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] シトクロム酸化酵素のHeme a3及びCu_B>サイトにおける電子構造の解析2011

    • Author(s)
      枩岡亨, Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Year and Date
      2011-09-24
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] An integrated automatic system for signal processing of genome-wide ChIP-data and identification of transcriptional binding motifs2011

    • Author(s)
      Ryo Nakaki, Masaru Tateno
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2011-12-14
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] シトクロム酸化酵素のCu_AサイトにおけるCu配位Met残基の機能的役割2011

    • Author(s)
      Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Year and Date
      2011-09-24
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] Theoretical and computational quantum structural biology for understanding functional mechanisms of biological macromolecular systems2011

    • Author(s)
      Masaru Tateno, Jiyoung Kang, Ryo Nakaki
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス(兵庫県)
    • Year and Date
      2011-09-17
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational investigation of functional role of axial methionine ligand of Cu_A site in cytochrome c oxidases2011

    • Author(s)
      Jiyoung Kang, 舘野賢
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] シトクロム酸化酵素のCu_AサイトにおけるCu配位Met残基の機能的役割2011

    • Author(s)
      Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Year and Date
      2011-09-24
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational investigation of functional role of axial methionine ligand of Cu_A site in cytochrome c oxidases2011

    • Author(s)
      Jiyoung Kang, 舘野賢
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] Computational investigation of functional role of axial methionine ligand of Cu_A site in cytochrome c oxidases2011

    • Author(s)
      Jiyoung Kang, 舘野賢
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] Development of a novel algorithm for identifying transcription factor binding motifs in the genome DNA sequences2011

    • Author(s)
      Ryo Nakaki ,Masaru Tateno
    • Organizer
      Biophysical Society 55th Annual Meeting
    • Place of Presentation
      Baltimore, MD, USA
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Structural instability of the active site of T1 lipase where Na+-π interaction is replaced with water-π complex2011

    • Author(s)
      Yohsuke Hagiwara, Jiyoung Kang, Masaru Tateno
    • Organizer
      Biophysical Society 55th Annual Meeting
    • Place of Presentation
      Baltimore, MD, USA
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical and computational quantum structural biology for understanding functional mechanisms of biological macromolecular systems2011

    • Author(s)
      Tateno, M.
    • Organizer
      Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Himeji
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] シトクロム酸化酵素のCu_AサイトにおけるCu配位Met残基の機能的役割2011

    • Author(s)
      Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] A computational study of the solvated structure of the complex of valyl-tRNA synthetase and the mis-aminoacylated tRNA^<Val>2011

    • Author(s)
      Masaru Tateno, Jiyoung Kang, Moonyoung Yang
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス(兵庫県)
    • Year and Date
      2011-09-18
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Dynamical rearrangements of electronic structure in editing reaction of LeuRS. valyl-tRNALeu complex2011

    • Author(s)
      舘野賢, Jiyoung Kang, 萩原陽介, Martin J. Field
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Analysis of fully-hydrated structures of human adult hemoglobin exploiting molecular dynamics simulations2011

    • Author(s)
      秋定〓宏, Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Year and Date
      2011-09-22
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] シトクロム酸化酵素のHeme ae及びCu_Bサイトにおける電子構造の解析2011

    • Author(s)
      枩岡享, Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Year and Date
      2011-09-24
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] A computational study of functional role of axial methionine ligand of Cu_A site in cytochrome c oxidase2011

    • Author(s)
      Jiyoung Kang and Masaru Tateno
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] Dynamical rearrangements of electronic structure in editing reaction of LeuRS・valyl-tRNA^<Leu> complex2011

    • Author(s)
      舘野賢, Jiyoung Kang, 萩原陽介, Martin J.Field
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] A computational study of functional role of axial methionine ligand of Cu_A site in cytochrome c oxidase2011

    • Author(s)
      Jiyoung Kang, Masaru Taiteno
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス(兵庫県)
    • Year and Date
      2011-09-17
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical and computational quantum structural biology for understanding functional mechanisms of biological macromolecular systems2011

    • Author(s)
      Tateno, M., Kang, J., and Nakaki, R.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical and computational quantum structural biology for understanding functional mechanisms of biological macromolecular systems2011

    • Author(s)
      Masaru Tateno, Jiyoung Kang, Ryo Nakaki
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス(兵庫県)
    • Year and Date
      2011-09-17
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] Theoretical and computational quantum structural biology for understanding functional mechanisms of biological macromolecular systems2011

    • Author(s)
      Masaru Tateno, Jiyoung Kang, and Ryo Nakaki
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] 生体高分子による触媒反応の動力学的機構2011

    • Author(s)
      舘野賢
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      つくば
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Dynamical catalytic mechanisms of novel hybrid catalyst2011

    • Author(s)
      Tateno, M.
    • Organizer
      BIT's Inaugurate Symposium on Enzymes & Biocatalysis
    • Place of Presentation
      Dalian, China
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] シトクロム酸化酵素のHeme a_3及びCu_Bサイトにおける電子構造の解析2011

    • Author(s)
      枩岡亨, Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館
    • Data Source
      KAKENHI-PROJECT-23654129
  • [Presentation] Molecular dynamics simulation of complex of valyl-tRNA synthetase and its cognate tRNA2011

    • Author(s)
      板垣哲彦, Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Year and Date
      2011-09-22
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] P450camにおける閉じた気質結合部位からの水の排出メカニズム2011

    • Author(s)
      中村淳志, Jiyoung Kang, 舘野賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Year and Date
      2011-09-24
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical studies of functional mechanisms of the bovine cytochrome coxidase2010

    • Author(s)
      M.Tateno
    • Organizer
      Allosteric cooperativity in soluble, membrane bound hemoproteins and related membrane systems
    • Place of Presentation
      Bari, Italy(招待講演)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational study of catalytic mechanisms of hybrid ribozyme/protein catalyst2010

    • Author(s)
      M.Tateno
    • Organizer
      BITs Inaugurate Symposium on Enzymes&Biocatalysis 2010
    • Place of Presentation
      Shanghai, China(招待講演)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] The grid-based energy representation : a novel descrciption of the potential field involving Na+-π interaction2010

    • Author(s)
      Masaru Tateno, Hiroyoshi Matsumura, Yohsuke Hagiwara
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Dynamical reaction mechanisms of hybrid ribozyme/protein catalyst revealed by using ab inito computer simulations2010

    • Author(s)
      Tateno, M.
    • Organizer
      Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Sendai, Japan
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational analysis of dynamical structures of Human adult hemoglobin2010

    • Author(s)
      Kyohei Hanaoka, Jiyoung Kang, Takashi Yonetani, Masaru Tateno
    • Organizer
      48th Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Sendai, Japan Tohoku University
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Development of an "ab initio" identification system of transcriptional factor binding motifs in genome DNA sequences2010

    • Author(s)
      Ryo Nakaki ,Masaru Tateno
    • Organizer
      48th Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Sendai, Japan Tohoku UniverSity
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Molecular dynamics simulation of human adult hemoglobin2010

    • Author(s)
      Kyohei Hanaoka, Jiyoung Kang, Takashi Yonetani, Masaru Tateno
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド (兵庫県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Effects of the environmental structures upon the electronic states of he me a of the bovine cytochrome c oxidase2010

    • Author(s)
      Jiyoung Kang , Masaru Tate no
    • Organizer
      48th Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Sendai, Japan Tohoku University
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Dynamical reaction mechanisms of hybrid ribozyme/protein catalyst revealed by using abinito computer simulations2010

    • Author(s)
      M.Tateno
    • Organizer
      Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Sendai, Japan, Tohoku University(招待講演)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational study of catalytic mechanisms of hybrid ribozyme/protein catalyst2010

    • Author(s)
      Tateno, M.
    • Organizer
      BIT's Inaugurate Symposium on Enzymes & Biocatalysis
    • Place of Presentation
      Shanghai, China
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational investigation of catalytic mechanisms of editing by isoleucyl-tRNA synthetase2010

    • Author(s)
      Akimasa Sato, Yohsuke Hagiwara, Masaru Tateno
    • Organizer
      48th Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Sendai, Japan Tohoku University
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Development of automatic identification system of transcriptional factor binding motifs in genome DNA sequences2010

    • Author(s)
      Ryo Nakaki , Masaru Tateno
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Editing mechanism of aminoacyl-tRNA synthetases operates by hybrid ribozyme/protein catalyst2010

    • Author(s)
      Masaru Tateno, Yohsuke Haogiwara
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド (兵庫県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational analysis toward identification of solution structure of Human adult hemoglobin2010

    • Author(s)
      Kyohei Hanaoka , Masaru Tateno
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コ苔ベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational analysis of editing mechanism by isoleucyl-tRNA Synthet ase2010

    • Author(s)
      Akimasa Sato, Yohsuke Hagiwara, Masaru Tateno
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical studies of functional mechanisms of the bovine cytochrome c oxidase2010

    • Author(s)
      Tateno, M.
    • Organizer
      Allosteric cooperativity in soluble, membrane bound hemoproteins and related membrane systems
    • Place of Presentation
      Bari, Italy
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] A novel computational system for identification of transcriptional regulation motifs in genome DNA base sequences2010

    • Author(s)
      Ryo Nakaki , Masaru Tateno
    • Organizer
      The 2nd Annual International Conference on Computational and Systems Biology
    • Place of Presentation
      Hangzhou, China
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational analysis of catalytic mechanisms by Hhal DNA methyltransferase2010

    • Author(s)
      Moon Young Yang, Yohsuke Hagiwara, Masaru Tateno
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational exploration of mechanisms of editing reaction by isoleucyl-tRNA synthetase2010

    • Author(s)
      Akimasa Sato,Yohsuke Hagiwara, Masaru Tateno
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド (兵庫県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Development of algorithm for sequence motif identification and its application to transcription factor regulation site of human genome DNA2010

    • Author(s)
      Ryo Nakaki , Masaru Tateno
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical modeling of bi-connected elementary biochemical reaction cycles2010

    • Author(s)
      Tatsunori Nishimura ,Masaru Tateno
    • Organizer
      Biophysical Society 55th Annual Meeting
    • Place of Presentation
      Baltimore, MD, USA
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational explorations of electronic and geometrical structures of heme a and heme a_3 in the bovine cytochrome c oxidase2010

    • Author(s)
      Jiyoung Kang, Mitsuo Shoji, Mauro Boero, Masaru Tateno
    • Organizer
      The 2nd Annual International Conference on Computational and Systems Biology
    • Place of Presentation
      Hangzhou, China
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical identification of structural elements for stabilizing a cavity present in the entrails of the human aryl hydrocarbon receptor dioxin binding domain2010

    • Author(s)
      M.Tateno, et al.
    • Organizer
      Biophysical Society 54-th annual meeting
    • Place of Presentation
      San Francisco, California, USA
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] A hybrid ribozyme/protein catalyst : a computational investigation of editing mechanism of aminoacyl-tRNA synthetases2010

    • Author(s)
      Yohsuke Hagiwara, Martin J.Field, Osamu Nureki, , Masaru Tateno
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational analysis of electronic structures of heme a in the bovine cytochrome c oxidase : apossible electron transfer pathway2010

    • Author(s)
      Jiyoung Kang, Daiki Kondo, Mitsuo Shoji, Mauro Boero, Masaru Tateno
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド (兵庫県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Theoretical characterization of elementary reaction cycles exploiting the steepness of the stimulus/response curve2010

    • Author(s)
      Tatsunori Nishimura ,Masaru Tateno
    • Organizer
      The 2nd Annual International Conference on Computational and Systems Biology
    • Place of Presentation
      Hangzhou, China
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Development and applications of a novel QM/MM hybrid molecular dynamics calculation system on highly parallel supercomputer systems2010

    • Author(s)
      M.Tateno, et al.
    • Organizer
      Biophysical Society 54-th annual meeting
    • Place of Presentation
      San Francisco, California, USA
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational investigation of catalytic mechanisms of Hhai DNA meth yltransferase2010

    • Author(s)
      Moon Young Yang , Masaru Tateno
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド (兵庫県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational analysis of reaction mechanisms of HhaI DNA methyltra nsferase2010

    • Author(s)
      MoonYoung Yang, Yohsuke Hagiwara, Masaru Tateno
    • Organizer
      48th Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Sendai, Japan Tohoku University
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Effects of long-range electrostatic interactions onto electronic structures of metal binding sites2010

    • Author(s)
      Jiyoung Kang, Takehiro Ohta, Yohsuke Hagiwara, Keigo Nishikawa, Tetsunori Yamamoto, Hidemi Nagao, Masaru Tateno
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Structural modeling and structural characterization of human aryl-hydrocarbon recetpor dioxin binding domain2009

    • Author(s)
      M.Tateno, et al.
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Exploration of Mechanisms of Proton Transfer in Cytochrome c Oxidase Using First Principles Molecular Dynamics2009

    • Author(s)
      M.Tateno
    • Organizer
      International Workshop on Metalloprotein Functions
    • Place of Presentation
      兵庫県立大学大学(兵庫県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Computational investigations of mechanisms of enzymatic reactions of RNA-binding proteins2009

    • Author(s)
      Tateno, M.
    • Organizer
      Annual Meeting of Biophysical Society of Japan
    • Place of Presentation
      Tokushima, Japan
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Mechanisms of Editing (Proofreading) by Leucyl-tRNA Synthetase Revealed by QM/MM Molecular Dynamics Simulations2009

    • Author(s)
      Tateno, M., et al.
    • Organizer
      Biophysical Society 53rd Annual meeting
    • Place of Presentation
      ボストン(アメリカ合衆国)
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] Exploration of mechanisms of proton transfer in cytochrome c oxidase using first principle molecular dynamics simulations2009

    • Author(s)
      Tateno, M.
    • Organizer
      International Workshop on Metalloprotein Functions
    • Place of Presentation
      Hyogo, Japan
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Structural modeling and dynamical properties of human aryl-judrpcarbpm receptordioxin binding domain,ヒト由来アリルカーボンレセプタダイオキシン結合ドメインの構造モデリングとその動的構造の解析2009

    • Author(s)
      M.Tateno, et al.
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      徳島文理大学(徳島県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Mechanisms of Editing (Proofreading) by Leucyl-tRNA Synthetase Revealed by QM/MM Molecular Dynamics Simulations2009

    • Author(s)
      Tateno, M., et.al.
    • Organizer
      Biophysical Society 53rd Annual meeting
    • Place of Presentation
      ボストン(アメリカ合衆国)
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] 生体超分子における生物機能発現機構の理論的解析2009

    • Author(s)
      M.Tateno
    • Organizer
      特定領域研究「生体超分子構造」第6回公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンタ(大阪府)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Structural modeling and dynamical properties of human aryl-hydrocarbon receptor dioxin binding domain,ヒト由来アリルカーボンレセプタダイオキシン結合ドメインの構造モデリングとその動的構造の解析2009

    • Author(s)
      M.Tateno, et al.
    • Organizer
      第82回日本生化学会大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Data Source
      KAKENHI-PROJECT-21340108
  • [Presentation] Reaction mechanism of editing by class I aaRS revealed by QM/MM molecular dynamics simulations2008

    • Author(s)
      Tateno, M., et al.
    • Organizer
      International conference on aminoacyl-tRNA synthetases (aaRSs)
    • Place of Presentation
      アヌシ(フランス)
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] Computational investigations of mechanisms of enzymatic reaction by using QM/MM molecular dynamics simulations2008

    • Author(s)
      Tateno, M., et.al.
    • Organizer
      International Conference on Quantum Simulators and Design, 2008
    • Place of Presentation
      日本科学未来館(東京都)
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] Development of QM/MM molecular dynamics program including an accurate and effective description of van der Waals interactions2008

    • Author(s)
      Tateno, M., et al.
    • Organizer
      第31回日本分子生物学会年会第81回日本生化学大会合同大会
    • Place of Presentation
      神戸国際会議場(兵庫県)
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] 高速かり高精度なvan der Waals相互作用計算スキームを含むQM/MM-MD計算プログラムの開発2008

    • Author(s)
      Tateno, M., et.al.
    • Organizer
      日本生物物理学会第46回年会
    • Place of Presentation
      幅岡国際会議場(福岡県)
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] 高速かり高精度なvan der Waals相互作用計算スキームを含むQM/MM-MD計算プログラムの開発2008

    • Author(s)
      Tateno, M., et al.
    • Organizer
      日本生物物理学会第46回年会
    • Place of Presentation
      福岡国際会議場(福岡県)
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] Development of QM/MM molecular dynamics program including an accurate and effective description of van der Waals interactions2008

    • Author(s)
      Tateno, M., et.al.
    • Organizer
      第31回日本分子生物学会年会第81回日本生化学大会合同大会
    • Place of Presentation
      神戸国際会議場(兵庫県)
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] Computational investigations of mechanisms of enzymatic reaction by using QM/MM molecular dynamics simulations2008

    • Author(s)
      Tateno, M., et al.
    • Organizer
      International Conference on Quantum Simulators and Design 2008
    • Place of Presentation
      日本科学未来館(東京都)
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] シトクロ-ム酸化酸素の発現機構の理論的解析2007

    • Author(s)
      舘野賢・神谷克也・白石賢二・押山淳・ボエロマウロ
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンタ,大阪
    • Year and Date
      2007-12-18
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] 情報科学および計算科学的手法を組み合わせたタンパク質間分子間ドッキング計算手法の開発2007

    • Author(s)
      橘田和志, 舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] 電子相関を露わに導入したQM/MMレプリカ・分子動力学計算法の開発2007

    • Author(s)
      萩原陽介・重田育照・舘野賢
    • Organizer
      次世代スーパーコンピューティング・シンポジウム2007
    • Place of Presentation
      明治安田生命ビル,東京
    • Year and Date
      2007-10-03
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] 電子相関を露わに導入したQM/MMレプリカ・分子動力学計算法の開発2007

    • Author(s)
      萩原陽介・重田育照・舘野賢
    • Organizer
      次世代スーパーコンピューティング・シンポジウム2007
    • Place of Presentation
      明治安田生命ビル,東京
    • Year and Date
      2007-10-03
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] ロイシルtRNA合成酵素の触媒反応機構の動力学的解析2007

    • Author(s)
      萩原陽介・ボエロマウロ・深井周也・濡木理・舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] ロイシルtRNA合成酵素の触媒反応機構の動力学的解析2007

    • Author(s)
      萩原陽介・ボエロマウロ・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] ロイシルtRNA合成酵素・tRNALeu複合体の分子動力学シミュレ-ション2007

    • Author(s)
      Cong, Yulong・萩原陽介・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] GatCABにおけるアンモニア輸送機構の計算科学的解析2007

    • Author(s)
      畔柳成秀, 舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] ロイシルtRNA合成酵素・tRNALeu複合体の分子動力学シミュレーション2007

    • Author(s)
      Cong Yulong, 萩原陽介, 舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] 生体超分子・機能発現機構解析のためのQM/MM分子動力学計算システムの開発2007

    • Author(s)
      重田育照, 萩原陽介, 姜 志〓, 舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] tRNA依存性アミド基転移酵素におけるアンモニア分子輸送機構の動力学的解析2007

    • Author(s)
      畔柳成秀・仲田まゆみ・萩原陽介・舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] 生体分子機能発現機構解析の為のQM/MM分子動力学計算プログラムの開発2007

    • Author(s)
      重田育照・萩原陽介・舘野賢
    • Organizer
      次世代スーパーコンピューティング・シンポジウム2007
    • Place of Presentation
      明治安田生命ビル,東京
    • Year and Date
      2007-10-03
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] 超分子における機能制御機構の量子構造生物学2007

    • Author(s)
      舘野賢・神谷克也・白石賢二・押山淳・ボエロマウロ
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] Computational Analyses of reaction mechanisms of biological macromolecules combined with informatical techniques2007

    • Author(s)
      Masaru Tateno
    • Organizer
      The 4th Conference of the Asian Consortium on Computational Materials Sciences(ACCMS-4)
    • Place of Presentation
      Seoul
    • Year and Date
      2007-09-10
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] ロイシルtRNA合成酵素・tRNALeu複合体の分子動力学シミュレーション2007

    • Author(s)
      Cong, Yulong・萩原陽介・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] 超分子における機能制御機構の量子構造生物学2007

    • Author(s)
      舘野賢、神谷克也、白石賢二、押山淳、ボエロマウロ
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] シトクローム酸化酵素の機能発現機構の理論的解析2007

    • Author(s)
      舘野賢・神谷克也・白石賢二・押山淳・ボエロマウロ
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンタ,大阪
    • Year and Date
      2007-12-18
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] GatCABにおけるアンモニア輸送機構の計算科学的解析2007

    • Author(s)
      畔柳成秀・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] 生体超分子・機能発現機構解析のためのQM/MM分子動力学計算システムの開発2007

    • Author(s)
      重田育照・萩原陽介・姜志〓・舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] シトクローム酸化酵素の機能発現機構の理論的解析2007

    • Author(s)
      舘野賢、神谷克也、白石賢二、押山淳、ボエロマウロ
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンタ,大阪
    • Year and Date
      2007-12-18
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] GatCABにおけるアンモニア輸送機構の計算科学的解析2007

    • Author(s)
      畔柳成秀・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] 生体分子機能発現機構解析の為のQM/MM分子動力学計算プログラムの開発2007

    • Author(s)
      重田育照, 萩原陽介, 舘野賢
    • Organizer
      次世代スーパーコンピューティング・シンポジウム2007
    • Place of Presentation
      明治安田生命ビル,東京
    • Year and Date
      2007-10-03
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] Computational Analyses of reaction mechanisms of biological macromole cules combined with informatical techniques2007

    • Author(s)
      Masaru Tateno
    • Organizer
      The 4th Conference of the Asian Consortium on Computational Materials Sciences(ACCMS-4)
    • Place of Presentation
      Seoul
    • Year and Date
      2007-09-10
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] ロイシルtRNA合成酵素の触媒反応機構の動力学的解析2007

    • Author(s)
      萩原陽介, ボエロ マウロ, 舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] 生体超分子・機能発現機構解析のためのQM/MM分子動力学計算システムの開発2007

    • Author(s)
      重田育照・萩原陽介・姜志〓・舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニュ-アカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] 超分子における機能制御機構の量子構造生物学2007

    • Author(s)
      舘野賢・神谷克也・白石賢二・押山淳・ボエロマウロ
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワ-クショップ
    • Place of Presentation
      ホテルニュ-アカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] ロイシルtRNA合成酵素の触媒反応機構の計算科学的解析2007

    • Author(s)
      萩原陽介, ボエロ マウロ, 深井周也, 濡木理, 舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] 生体超分子・機能発現機構解析のためのQM/MM分子動力学計算システムの開発2007

    • Author(s)
      重田育照・萩原陽介・舘野賢
    • Organizer
      次世代スーパーコンピューティング・シンポジウム2007
    • Place of Presentation
      明治安田生命ビル,東京
    • Year and Date
      2007-10-03
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] Computational Analyses of reaction mechanisms of biological macromole cules combined with informatical techniques2007

    • Author(s)
      Nasaru, Tateno
    • Organizer
      The 4th Conference of the Asian Consortium on Computational Materials sciences (ACCMS-4)
    • Place of Presentation
      KIST, Seoul
    • Year and Date
      2007-09-10
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] ロイシルtRNA合成酵素の触媒反応機構の計算科学的解析2007

    • Author(s)
      萩原陽介・ボエロマウロ・深井周也・濡木理・舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワ-クショップ
    • Place of Presentation
      ホテルニュ-アカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] 情報科学および計算科学的手法を組み合わせたタンパク質間分子間ドッキング2007

    • Author(s)
      橘田和志・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-19019003
  • [Presentation] 電子相関を露わに導入したQM/MMレプリカ・分子動力学計算法の開発2007

    • Author(s)
      萩原陽介, 重田育照, 舘野賢
    • Organizer
      次世代スーパーコンピューティング・シンポジウム2007
    • Place of Presentation
      明治安田生命ビル,東京
    • Year and Date
      2007-10-03
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] 情報科学および計算科学的手法を組み合わせたタンパク質間分子間ドッキング計算手法の開発2007

    • Author(s)
      橘田和志・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] tRNA依存性アミド基転移酵素におけるアンモニア分子輸送機構の動力学的解析2007

    • Author(s)
      畔柳成秀, 仲田まゆみ, 萩原陽介, 舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワークショップ
    • Place of Presentation
      ホテルニューアカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-19340108
  • [Presentation] tRNA依存性アミド基転移酵素におけるアンモニア分子輸送機構の動力学的解析2007

    • Author(s)
      畔柳成秀・仲田まゆみ・萩原陽介・舘野賢
    • Organizer
      科学研究費補助金特定領域研究「生体超分子構造」第三回ワ-クショップ
    • Place of Presentation
      ホテルニュ-アカオ,熱海
    • Year and Date
      2007-07-11
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] ロイシルtRNA合成酵素の触媒反応機構の動力学的解析2007

    • Author(s)
      萩原陽介・ボエロマウロ・舘野賢
    • Organizer
      第7回蛋白質科学会年会
    • Place of Presentation
      仙台国際センタ、仙台
    • Year and Date
      2007-05-24
    • Data Source
      KAKENHI-PROJECT-18054004
  • [Presentation] Theoretical analysis of proton transfer mechanisms of photosystem II employing hybrid quantum molecular dynamics simulation

    • Author(s)
      Nakamura, A., Kang, J., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Propagation pathways of structural changes for T/R transition: Modulation mechanism of O2 affinity of human adult haemoglobin

    • Author(s)
      Tateno, M., Itagaki, T., and Kang, J.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Novel algorithm for identification of gene clusters in whole genome DNA sequences by combining rigorous and heuristic schemes

    • Author(s)
      Takahashi, Y., Kang, J., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Modulation of atomic electron densities of cytosine base through proton dislocation for catalytic enhancement by M. HhaI DNA methyltransferase

    • Author(s)
      Kang, J., and Tateno, M.
    • Organizer
      2nd International Picobiology Institute Symposium
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2014-10-09 – 2014-10-10
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Structural modeling of negatively supercoiled DNA recognition peptide complexed with crossover double stranded DNA molecules

    • Author(s)
      Sato, C., Kang, J., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Determination of configurations of ligands bound to CuB site of bovine cytochrome c oxidases by using spatial mapping technique of energy

    • Author(s)
      Kang, J., Matsuoka, T., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Theoretical analysis of functional mechanisms of hydrogenases using ab initio electronic calculation and molecular mechanics calculations

    • Author(s)
      Kim, J., Kang, J., and Tateno, M.
    • Organizer
      2nd International Picobiology Institute Symposium
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2014-10-09 – 2014-10-10
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Dual catalytic pathways identified in complex of oncogenic product Ras and Ras-GAP

    • Author(s)
      Sakabe, K., Kang, J., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Comparison of electronic structures of the proximal cluster in membrane bound hydrogenases (MBH) in the presence and absence of a hydroxide ligand

    • Author(s)
      Kim, J., Kang, J., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Development and application of structural analysis system of protein- protein complexes based on identifications of hydrogen bond network

    • Author(s)
      Takeda, T., Kang, J., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • [Presentation] Identification of DNA binding motifs of topoisomerase IIb in rat whole genome DNA sequence : Mechanism of DNA recognition

    • Author(s)
      Sugimoto, A., Kang, J., and Tateno, M.
    • Organizer
      The annual evaluation conference of the leading program
    • Place of Presentation
      Center of Advanced Sciences and Technologies (CAST) (兵庫)
    • Year and Date
      2015-03-16 – 2015-03-17
    • Data Source
      KAKENHI-PROJECT-25287099
  • 1.  NUREKI Osamu (10272460)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 5 results
  • 2.  BOERO Mauro (40361315)
    # of Collaborated Projects: 3 results
    # of Collaborated Products: 20 results
  • 3.  重田 育照 (80376483)
    # of Collaborated Projects: 3 results
    # of Collaborated Products: 9 results
  • 4.  SHIRAISHI Kenji (20334039)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 4 results
  • 5.  KINO Hiori (70282605)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 2 results
  • 6.  NAKAYAMA Takashi) (70189075)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 7.  OSHIYAMA Atsushi (80143361)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 8.  OKADA Susumu (70302388)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  BARBER Savas (90375402)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  TSUKAHARA Toshifumi (60207339)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  SUZUKI HITOSHI (00447690)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 12.  Yoshikawa Shinya (40068119)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 13.  ISHIMORI Koichiro (20192487)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 14.  SHINZAWA Kyoko (70206316)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  KUBO Minoru (90392878)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 16.  TAMADA Tarou (50391248)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 17.  MISAKI Tomonori (00411786)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 18.  Yamaguchi Hiroshi (00450841)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 12 results
  • 19.  山崎 和彦 (00358243)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 8 results
  • 20.  筒井 公子 (70144748)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 9 results
  • 21.  岡田 真希 (00415407)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 5 results
  • 22.  新沢 伊藤恭子
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 2 results

URL: 

Are you sure that you want to link your ORCID iD to your KAKEN Researcher profile?
* This action can be performed only by the researcher himself/herself who is listed on the KAKEN Researcher’s page. Are you sure that this KAKEN Researcher’s page is your page?

この研究者とORCID iDの連携を行いますか?
※ この処理は、研究者本人だけが実行できます。

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi