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KURODA SHINYA  黒田 真也

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Kuroda Shinya  黒田 真也

KURODA Shinya  黒田 真也

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Researcher Number 50273850
Other IDs
Affiliation (Current) 2025: 東京大学, 大学院理学系研究科(理学部), 教授
Affiliation (based on the past Project Information) *help 2017 – 2024: 東京大学, 大学院理学系研究科(理学部), 教授
2011 – 2013: 東京大学, 理学(系)研究科(研究院), 教授
2007 – 2011: The University of Tokyo, Graduate School of Science, Professor
2006: 東京大学, 大学院情報理工学系研究科, 教授
2006: 東京大学, 大学院理学系研究科, 教授 … More
2005: 東京大学, 大学院・情報理工学系研究科, 科学技術振興特任教員
2005: 東京大学, 大学院情報理工系研究科, 特任助教授(科学技術振興特任研究員、常勤形態)
2004: 東京大学, 大学院・情報理工学系研究科, 科学技術振興特任研究員(常勤形態)
2004: University of Tokyo, Graduate School of Information Science and Technology, Project Associate Professor, 大学院情報理工学系研究科, 科学技術振興特任教員
2003 – 2004: 東京大学, 大学院・情報理工系研究科, 特任助教授
2003: 東京大学, 大学院・情報理工学系研究科, 科学技術振興特任教員(常勤形態)
1996 – 1998: 奈良先端科学技術大学院大学, バイオサイエンス研究科, 助手 Less
Review Section/Research Field
Principal Investigator
Medium-sized Section 43:Biology at molecular to cellular levels, and related fields / Biological Sciences / Bioinformatics/Life informatics / Biological Sciences / Pathological medical chemistry / Transformative Research Areas, Section (III) / Medium-sized Section 61:Human informatics and related fields / System genome science
Except Principal Investigator
Transformative Research Areas, Section (III) / Cell biology
Keywords
Principal Investigator
シグナル伝達 / システム生物学 / 低分子量G蛋白質 / トランスオミクス / カドヘリン / IQGAP / Rho-kinase / 細胞接着 / ゾネーション / 1細胞 … More / 代謝アダプテーション / 生体生命情報 / AF-6 / カテニン / 細胞不均一性 / 情報量 / 1細胞 / メタボロミクス / 冬眠・休眠 / 確率的ゆらぎ / 自動認識 / 相互情報量 / 1細胞計測 / 時間情報コード / 細胞内変動 / 細胞間変動 / 情報理論 / ニューロン / 情報コード / 小体積効果 / 少数性 / ゆらぎ / ロバストネス / スパイン / マルチオミクス / 2型糖尿病 / 2型糖尿病 / オミクス計測 / 代謝 / bioinformatics / systems biology / signal transduction / バイオインフォマティクス / インスリン / グリコーゲン / 糖代謝 / モデル化 / ローバスフィルタ / ローパスフィルタ / 周波数応答 / Akt / シミュレーションモデル / シミュレーション / ERK / バイオインフォマティク / 安定性 / 血管収縮 / シグナル伝逹 / NMDA受容体 / システム生物 / シナプス可塑性 / カラニン / リン酸化 / IQGAPl / 細胞間接着 / Rac / Cdc42 / Ras / PDZドメイン / 細胞骨格 / coiled coil / Rho kinase … More
Except Principal Investigator
Rho / 細胞接着 / リン酸化 / CRMP-2 / IQGAP / Rho-Kinase / カドヘリン / 細胞骨格 / Ras / Rho-kinase / 低分子量G蛋白質 / 神経科学 / 生理学 / 哺乳類 / 休眠 / 冬眠 / contraction / simulation / signal transduction / Rho family / migration / axon / polarily / Numb / KIF3A / PAR-3 / APC / IQGAP1 / GSK-3β / PI3-kinase / PAR複合体 / 神経細胞 / 運命決定 / エンドサイトーシス / アクチン / チューブリン / WAVE1 / Sra-1 / コンピューターシミュレーション / Kinesin / Disc1 / ミオシン / 軸索 / Par-3 / Rac / 遊走 / 細胞極性 / 収縮 / シミュレーション / シグナル伝達 / Rhoファミリー / 細胞遊走 / 神経軸索 / 極性 / Neurite / Microvilli / Cell migration / Cadherin / Cell adhesion / Phosphorylation / Small GTPases / adducin / ERM / MBS / 低分子量GTP結合蛋白質 / 神経突起 / 微絨毛 / 細胞運動 / 線虫 / カテニン / フォスファターゼ / プロテインキナーゼ / 標的蛋白質 / 増殖 / 転移 / 浸潤 / Rhoキナーゼ Less
  • Research Projects

    (24 results)
  • Research Products

    (141 results)
  • Co-Researchers

    (48 People)
  •  Transomic analysis of hybernation and torporPrincipal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      2023 – 2027
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      The University of Tokyo
  •  冬眠生物学2.0 総括班

    • Principal Investigator
      山口 良文
    • Project Period (FY)
      2023 – 2027
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      Hokkaido University
  •  Information coding based in cell-to-cell variabilityPrincipal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      2021 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 43:Biology at molecular to cellular levels, and related fields
    • Research Institution
      The University of Tokyo
  •  Robust information coding by smallness of neural spinesPrincipal Investigator

    • Principal Investigator
      Kuroda Shinya
    • Project Period (FY)
      2019 – 2020
    • Research Category
      Grant-in-Aid for Challenging Research (Exploratory)
    • Review Section
      Medium-sized Section 61:Human informatics and related fields
    • Research Institution
      The University of Tokyo
  •  Temporal coding of single cell signal transductionPrincipal Investigator

    • Principal Investigator
      Kuroda Shinya
    • Project Period (FY)
      2018 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 43:Biology at molecular to cellular levels, and related fields
    • Research Institution
      The University of Tokyo
  •  Transomic Analysis of Metabolic AdaptationArea Organizer

    • Area Organizer
      黒田 真也
    • Project Period (FY)
      2017 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
  •  Trans-omic analysis of metabolic adaptationPrincipal Investigator

    • Principal Investigator
      Kueoda Shinya
    • Project Period (FY)
      2017 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Metabolic adaptation of type 2 diabetesPrincipal Investigator

    • Principal Investigator
      Kuroda Shinya
    • Project Period (FY)
      2017 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  細胞内シグナル伝達機構における時間情報コードのシステム生物学Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      2012 – 2013
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Research Field
      System genome science
    • Research Institution
      The University of Tokyo
  •  Systems biology of AKT signalingPrincipal Investigator

    • Principal Investigator
      KURODA Shinya
    • Project Period (FY)
      2009 – 2011
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Research Field
      Bioinformatics/Life informatics
    • Research Institution
      The University of Tokyo
  •  Systems biology of ERK signaling networksPrincipal Investigator

    • Principal Investigator
      KURODA Shinya
    • Project Period (FY)
      2006 – 2008
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Research Field
      Bioinformatics/Life informatics
    • Research Institution
      The University of Tokyo
  •  System analysis of stability and plasticity of signal transductionPrincipal Investigator

    • Principal Investigator
      KURODA Shinya
    • Project Period (FY)
      2005 – 2009
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Systems analysis of molecular networks based on biochemical computational simulationsPrincipal Investigator

    • Principal Investigator
      KURODA Shinya
    • Project Period (FY)
      2003 – 2004
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      University of Tokyo
  •  Molecular mechanism underlying cell polarity and cell migration

    • Principal Investigator
      KAIBUCHI Kozo
    • Project Period (FY)
      2003 – 2007
    • Research Category
      Grant-in-Aid for Creative Scientific Research
    • Research Institution
      Nagoya University
  •  低分子量G蛋白質の標的蛋白質とその病態Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      1998
    • Research Category
      Grant-in-Aid for Encouragement of Young Scientists (A)
    • Research Field
      Pathological medical chemistry
    • Research Institution
      Nara Institute of Science and Technology
  •  低分子量G蛋白質とその標的蛋白質による細胞内情報ネットワークの解析

    • Principal Investigator
      貝淵 弘三
    • Project Period (FY)
      1998
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas (A)
    • Research Institution
      Nara Institute of Science and Technology
  •  低分子量G蛋白質とその標的蛋白質による血管構築の分子機構Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      1998
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas (A)
    • Research Institution
      Nara Institute of Science and Technology
  •  細胞増殖制御における低分子量G蛋白質の機能と作用機構

    • Principal Investigator
      KAIBUCHI Kozo
    • Project Period (FY)
      1997
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      Nara Institute of Science and Technology
  •  低分子量G蛋白質とその標的蛋白質の相互作用の構造解析Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      1997
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      Nara Institute of Science and Technology
  •  低分子量G蛋白質とその標的蛋白質による細胞内情報ネットワークの解折Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      1997
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      Nara Institute of Science and Technology
  •  低分子量G蛋白質とその標的蛋白質による血管構築の分子機構Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      1997
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      Nara Institute of Science and Technology
  •  Regulation of Cytoskeletons and Cell Adhesions by the Rho Family GTPases.

    • Principal Investigator
      KAIBUCHI Kozo
    • Project Period (FY)
      1997 – 1998
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Cell biology
    • Research Institution
      Nara Institute of Science and Technology
  •  低分子量G蛋白質とその標的蛋白質の相互作用の構造解析Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      1996
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      Nara Institute of Science and Technology
  •  低分子量G蛋白質の標的蛋白質の機能とその病態Principal Investigator

    • Principal Investigator
      黒田 真也
    • Project Period (FY)
      1996
    • Research Category
      Grant-in-Aid for Encouragement of Young Scientists (A)
    • Research Field
      Pathological medical chemistry
    • Research Institution
      Nara Institute of Science and Technology

All 2024 2023 2022 2021 2020 2019 2018 2017 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 Other

All Journal Article Presentation Book Patent

  • [Book] 現代生物科学入門8システムバイオロジー2010

    • Author(s)
      近藤滋, 北野宏明, 金子邦彦, 黒田真也
    • Total Pages
      176
    • Publisher
      岩波書店
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Book] 生命科学の新しい潮流理論生物学2010

    • Author(s)
      望月敦史, 石原秀至, 杉村薫, 柴田達夫, 黒澤元, 齋藤大助, 津元国親, 小林徹也, 上田昌宏, 澤井哲, 大浪修一, 本田稔, 黒田真也, 小林亮, 中垣俊之, 三浦岳, 本多久夫, 森下喜弘
    • Publisher
      共立出版
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Book] 生命科学の新しい潮流 理論生物学2010

    • Author(s)
      望月敦史、石原秀至、杉村薫、柴田達夫、黒澤元、齊藤大助、津元国親、小林徹也、上田昌宏、澤井哲、大浪修一、本田稔、黒田真也、小林亮、中垣俊之、三浦岳、本多久夫、森下喜弘
    • Total Pages
      2
    • Publisher
      共立出版
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity.2024

    • Author(s)
      Bai Y, Morita K, Kokaji T, Hatano A, Ohno S, Egami R, Pan Y, Li D, Yugi K, Uematsu S, Inoue H, Inaba Y, Suzuki Y, Matsumoto M, Takahashi M, Izumi Y, Bamba T, Hirayama A, Soga T, Kuroda S*.
    • Journal Title

      iScience

      Volume: 27(3) Issue: 3 Pages: 109121-109121

    • DOI

      10.1016/j.isci.2024.109121

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22K18924, KAKENHI-PROJECT-22K19545, KAKENHI-PROJECT-21K16349, KAKENHI-PROJECT-21H04759, KAKENHI-PLANNED-22H05185, KAKENHI-PROJECT-23K24764, KAKENHI-PROJECT-23K27996
  • [Journal Article] Optogenetic decoding of Akt2-regulated metabolic signaling pathways in skeletal muscle cells using transomics analysis2023

    • Author(s)
      Kawamura Genki、Kokaji Toshiya、Kawata Kentaro、Sekine Yuka、Suzuki Yutaka、Soga Tomoyoshi、Ueda Yoshibumi、Endo Mizuki、Kuroda Shinya、Ozawa Takeaki
    • Journal Title

      Science Signaling

      Volume: 16 Issue: 773 Pages: 773-773

    • DOI

      10.1126/scisignal.abn0782

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21K16349, KAKENHI-PROJECT-22K14779, KAKENHI-PROJECT-20K15395, KAKENHI-PROJECT-18H03979, KAKENHI-PROJECT-19H00900, KAKENHI-PROJECT-21H04759, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300
  • [Journal Article] DI/cle , a Measure Consisting of Insulin Sensitivity, Secretion, and Clearance, Catures Diabetic States2023

    • Author(s)
      3.Sugimoto, H., Hironaka, K., Yamada, T., Sakaguchi, K., Ogawa, W., and Kuroda, S.
    • Journal Title

      The Journal of Clinical Endocrinology & Metabolism

      Volume: 108(12) Issue: 12 Pages: 3080-3089

    • DOI

      10.1210/clinem/dgad392

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Journal Article] Features extracted using tensor decomposition reflect the biological features of the temporal patterns of human blood multimodal metabolome2023

    • Author(s)
      Fujita Suguru、Karasawa Yasuaki、Hironaka Ken-ichi、Taguchi Y.-h.、Kuroda Shinya
    • Journal Title

      PLOS ONE

      Volume: 18 Issue: 2 Pages: e0281594-e0281594

    • DOI

      10.1371/journal.pone.0281594

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K16578, KAKENHI-PROJECT-18H03979, KAKENHI-PROJECT-21H04759, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-20K12067
  • [Journal Article] トランスオミクス解析による休眠・冬眠現象の包括的理解に向けて2023

    • Author(s)
      杉本光、黒田真也
    • Journal Title

      月刊「細胞」

      Volume: 12月号 Pages: 1125-1129

    • Data Source
      KAKENHI-ORGANIZER-23H04939
  • [Journal Article] DNA hypomethylation characterizes genes encoding tissue-dominant functional proteins in liver and skeletal muscle2023

    • Author(s)
      Maehara H.、Kokaji T.、Hatano A.、Suzuki Y.、Matsumoto M.、Nakayama K. I.、Egami R.、Tsuchiya T.、Ozaki H.、Morita K.、Shirai M.、Li D.、Terakawa A.、Uematsu S.、Hironaka K.、Ohno S.、Kubota H.、Araki H.、Miura F.、Ito T.、Kuroda S.
    • Journal Title

      Scientific Reports

      Volume: 13 Issue: 1 Pages: 19118-19118

    • DOI

      10.1038/s41598-023-46393-5

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22K17992, KAKENHI-PROJECT-20K19915, KAKENHI-PROJECT-21K16349, KAKENHI-PROJECT-21H04759, KAKENHI-PROJECT-23K23870
  • [Journal Article] In vivo transomic analyses of glucose-responsive metabolism in skeletal muscle reveal core differences between the healthy and obese states.2022

    • Author(s)
      Kokaji T, Eto M, Hatano A, Yugi K, Morita K, Ohno S, Fujii M, Hironaka KI, Ito Y, Egami R, Uematsu S, Terakawa A, Pan Y, Maehara H, Li D, Bai Y, Tsuchiya T, Ozaki H, Inoue H, Kubota H, Suzuki Y, Hirayama A, Soga T, Kuroda S.
    • Journal Title

      Sci Rep

      Volume: 12 Issue: 1 Pages: 13719-13719

    • DOI

      10.1038/s41598-022-17964-9

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22K19545, KAKENHI-PROJECT-20K19915, KAKENHI-PROJECT-21K14467, KAKENHI-PROJECT-21K16349, KAKENHI-PROJECT-20H03237, KAKENHI-PROJECT-20H04102, KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-19K20394, KAKENHI-PROJECT-18H03979, KAKENHI-PLANNED-18H05431, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300
  • [Journal Article] Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes2022

    • Author(s)
      Terakawa Akira、Hu Yanhui、Kokaji Toshiya、Yugi Katsuyuki、Morita Keigo、Ohno Satoshi、Pan Yifei、Bai Yunfan、Parkhitko Andrey A.、Ni Xiaochun、Asara John M.、Bulyk Martha L.、Perrimon Norbert、Kuroda Shinya
    • Journal Title

      iScience

      Volume: 25 Issue: 5 Pages: 104231-104231

    • DOI

      10.1016/j.isci.2022.104231

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K14467, KAKENHI-PROJECT-21K16349, KAKENHI-PROJECT-18H03979, KAKENHI-PROJECT-21H04759, KAKENHI-PLANNED-18H05431, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300
  • [Journal Article] Four features of temporal patterns characterize similarity among individuals and molecules by glucose ingestion in humans2022

    • Author(s)
      Fujita Suguru、Karasawa Yasuaki、Fujii Masashi、Hironaka Ken-ichi、Uda Shinsuke、Kubota Hiroyuki、Inoue Hiroshi、Sumitomo Yohei、Hirayama Akiyoshi、Soga Tomoyoshi、Kuroda Shinya
    • Journal Title

      npj Systems Biology and Applications

      Volume: 8 Issue: 1 Pages: 6-6

    • DOI

      10.1038/s41540-022-00213-0

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-16H06577, KAKENHI-ORGANIZER-17H06299, KAKENHI-PUBLICLY-20H04847, KAKENHI-PUBLICLY-20H04943, KAKENHI-PROJECT-20H04102, KAKENHI-PROJECT-18K16578, KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-20H03237, KAKENHI-PROJECT-18H03979, KAKENHI-PLANNED-17H06300
  • [Journal Article] Multi-omics-based label-free metabolic flux inference reveals obesity-associated dysregulatory mechanisms in liver glucose metabolism2022

    • Author(s)
      Uematsu Saori、Ohno Satoshi、Tanaka Kaori Y.、Hatano Atsushi、Kokaji Toshiya、Ito Yuki、Kubota Hiroyuki、Hironaka Ken-ichi、Suzuki Yutaka、Matsumoto Masaki、Nakayama Keiichi I.、Hirayama Akiyoshi、Soga Tomoyoshi、Kuroda Shinya
    • Journal Title

      iScience

      Volume: 25 Issue: 2 Pages: 103787-103787

    • DOI

      10.1016/j.isci.2022.103787

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-16H06577, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H05215, KAKENHI-PLANNED-20H05930, KAKENHI-PROJECT-19J22134, KAKENHI-PROJECT-20K21386, KAKENHI-PROJECT-21K14467, KAKENHI-PROJECT-20H03237, KAKENHI-PROJECT-18H03979, KAKENHI-PROJECT-21H04759, KAKENHI-PLANNED-17H06300
  • [Journal Article] Quantitative metabolic fluxes regulated by trans-omic networks2022

    • Author(s)
      Ohno Satoshi、Uematsu Saori、Kuroda Shinya
    • Journal Title

      Biochemical Journal

      Volume: 479 Issue: 6 Pages: 787-804

    • DOI

      10.1042/bcj20210596

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19J22134, KAKENHI-PROJECT-21K14467, KAKENHI-PROJECT-18H03979, KAKENHI-PROJECT-21H04759, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300
  • [Journal Article] Fat Induces Glucose Metabolism in Nontransformed Liver Cells and Promotes Liver Tumorigenesis2021

    • Author(s)
      L. A. Broadfield, J. A. G. Duarte, R. Schmieder, D. Broekaert, K. Veys, M. Planque, K. Vriens, Y. Karasawa, F. Napolitano, S. Fujita, M. Fujii, M. Eto, B. Holvoet, R. Vangoitsenhoven, J. Fernandez-Garcia, J. van Elsen, J. Dehairs, J. Zeng, J. Dooley, R. Alba Rubio, J. van Pelt et al.
    • Journal Title

      Cancer Research

      Volume: 81 Issue: 8 Pages: 1988-2001

    • DOI

      10.1158/0008-5472.can-20-1954

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K20382, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18K16578, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-18H03979
  • [Journal Article] An extensive and dynamic trans-omic network illustrating prominent regulatory mechanisms in response to insulin in the liver2021

    • Author(s)
      Matsuzaki Fumiko、Uda Shinsuke、Yamauchi Yukiyo、Matsumoto Masaki、Soga Tomoyoshi、Maehara Kazumitsu、Ohkawa Yasuyuki、Nakayama Keiichi I.、Kuroda Shinya、Kubota Hiroyuki
    • Journal Title

      Cell Reports

      Volume: 36 Issue: 8 Pages: 109569-109569

    • DOI

      10.1016/j.celrep.2021.109569

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-16H06577, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H05215, KAKENHI-PUBLICLY-20H04847, KAKENHI-PLANNED-20H05930, KAKENHI-PROJECT-20K21386, KAKENHI-PROJECT-18K15011, KAKENHI-PROJECT-20H03237, KAKENHI-PLANNED-17H06300
  • [Journal Article] Trans-omic analysis reveals obesity-associated dysregulation of inter-organ metabolic cycles between the liver and skeletal muscle2021

    • Author(s)
      Egami Riku、Kokaji Toshiya、Hatano Atsushi、et al.
    • Journal Title

      iScience

      Volume: 24 Issue: 3 Pages: 102217-102217

    • DOI

      10.1016/j.isci.2021.102217

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K21386, KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-19K20394, KAKENHI-PROJECT-20K19915, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-18H05215, KAKENHI-PUBLICLY-20H04943, KAKENHI-PROJECT-20H04102, KAKENHI-PROJECT-19J10234, KAKENHI-PROJECT-19J22134, KAKENHI-PROJECT-19K24361, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H03979, KAKENHI-PLANNED-16H06577, KAKENHI-PLANNED-20H05930, KAKENHI-PROJECT-18KT0020, KAKENHI-PLANNED-18H05431, KAKENHI-PROJECT-20H03237
  • [Journal Article] Kinetic Trans-omic Analysis Reveals Key Regulatory Mechanisms for Insulin-Regulated Glucose Metabolism in Adipocytes2020

    • Author(s)
      Ohno Satoshi、Quek Lake-Ee、Krycer James R.、Yugi Katsuyuki、Hirayama Akiyoshi、Ikeda Satsuki、Shoji Futaba、Suzuki Kumi、Soga Tomoyoshi、James David E.、Kuroda Shinya
    • Journal Title

      iScience

      Volume: 23 Issue: 9 Pages: 101479-101479

    • DOI

      10.1016/j.isci.2020.101479

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-17H06300, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H03979, KAKENHI-PLANNED-18H05431
  • [Journal Article] Transomics analysis reveals allosteric and gene regulation axes for altered hepatic glucose-responsive metabolism in obesity2020

    • Author(s)
      Kokaji Toshiya、Hatano Atsushi、Ito Yuki、et al.
    • Journal Title

      Science Signaling

      Volume: 13 Issue: 660 Pages: 1236-1236

    • DOI

      10.1126/scisignal.aaz1236

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K21386, KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-19K20394, KAKENHI-PROJECT-20K19915, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-18H05215, KAKENHI-PUBLICLY-19H04969, KAKENHI-PUBLICLY-19H05243, KAKENHI-PUBLICLY-20H04847, KAKENHI-PUBLICLY-20H04943, KAKENHI-PROJECT-18H02431, KAKENHI-PROJECT-20H04102, KAKENHI-PROJECT-19K24361, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H03979, KAKENHI-PLANNED-16H06577, KAKENHI-PLANNED-18H05431, KAKENHI-PLANNED-20H05930, KAKENHI-PROJECT-18KT0020, KAKENHI-PROJECT-20H03237
  • [Journal Article] Monitoring and mathematical modeling of mitochondrial ATP in myotubes at single-cell level reveals two distinct population with different kinetics2020

    • Author(s)
      N. Matsuda, K. Hironaka, M. Fujii, T. Wada, K. Kunida, H. Inoue, M. Eto, D. Hoshino, Y. Furuichi, Y. Manabe, N. L. Fujii, H. Noji, H. Imamura, S. Kuroda
    • Journal Title

      Quantitative Biology

      Volume: 8 Issue: 3 Pages: 228-237

    • DOI

      10.1007/s40484-020-0211-8

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-17H02159, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H03979
  • [Journal Article] Single-Cell Information Analysis Reveals That Skeletal Muscles Incorporate Cell-to-Cell Variability as Information Not Noise2020

    • Author(s)
      Wada Takumi、Hironaka Ken-ichi、Wataya Mitsutaka、Fujii Masashi、Eto Miki、Uda Shinsuke、Hoshino Daisuke、Kunida Katsuyuki、Inoue Haruki、Kubota Hiroyuki、Takizawa Tsuguto、Karasawa Yasuaki、Nakatomi Hirofumi、Saito Nobuhito、Hamaguchi Hiroki、Furuichi Yasuro、Manabe Yasuko、Fujii Nobuharu L.、Kuroda Shinya
    • Journal Title

      Cell Reports

      Volume: 32 Issue: 9 Pages: 108051-108051

    • DOI

      10.1016/j.celrep.2020.108051

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K16578, KAKENHI-PROJECT-19K20382, KAKENHI-PUBLICLY-20H04847, KAKENHI-PROJECT-18H02431, KAKENHI-PROJECT-20J14059, KAKENHI-PROJECT-19K22860, KAKENHI-ORGANIZER-17H06299, KAKENHI-PROJECT-18H03979, KAKENHI-PLANNED-16H06577, KAKENHI-PROJECT-20H03237
  • [Journal Article] Trans-omic Analysis Reveals ROS-Dependent Pentose Phosphate Pathway Activation after High-Frequency Electrical Stimulation in C2C12 Myotubes2020

    • Author(s)
      Hoshino Daisuke、Kawata Kentaro、Kunida Katsuyuki、Hatano Atsushi、Yugi Katsuyuki、Wada Takumi、Fujii Masashi、Sano Takanori、Ito Yuki、Furuichi Yasuro、Manabe Yasuko、Suzuki Yutaka、Fujii Nobuharu L.、Soga Tomoyoshi、Kuroda Shinya
    • Journal Title

      iScience

      Volume: 23 Issue: 10 Pages: 101558-101558

    • DOI

      10.1016/j.isci.2020.101558

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K16635, KAKENHI-PROJECT-19K20382, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-17H02159, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-18H05431, KAKENHI-PROJECT-20H04079, KAKENHI-PROJECT-18K19751
  • [Journal Article] NMDAR-mediated Ca2+ increase shows robust information transfer in dendritic spines2019

    • Author(s)
      Tottori Takehiro、Fujii Masashi、Kuroda Shinya
    • Journal Title

      Biophysical Journal

      Volume: 印刷中 Issue: 9 Pages: 1748-1758

    • DOI

      10.1016/j.bpj.2019.03.030

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16K12508, KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-18H03979
  • [Journal Article] Robustness against additional noise in cellular information transmission2019

    • Author(s)
      Tottori, T., Fujii, M., Kuroda, S
    • Journal Title

      Phys.Rev.E

      Volume: 100 Pages: 042403-042403

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19K22860
  • [Journal Article] Logical design of oral glucose ingestion pattern minimizing blood glucose in humans.2019

    • Author(s)
      Fujii M, Murakami Y, Karasawa Y, Sumitomo Y, Fujita S, Koyama M, Uda S, Kubota H, Inoue H, Konishi K, Oba S, Ishii S, Kuroda S.
    • Journal Title

      NPJ Syst Biol Appl.

      Volume: 5 Issue: 1 Pages: 31-31

    • DOI

      10.1038/s41540-019-0108-1

    • NAID

      120006939199

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18KT0020, KAKENHI-PROJECT-18K16578, KAKENHI-PROJECT-19K20382, KAKENHI-PUBLICLY-18H04801, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300, KAKENHI-PLANNED-16H06577
  • [Journal Article] Robustness against additional noise in cellular information transmission2019

    • Author(s)
      Tottori Takehiro、Fujii Masashi、Kuroda Shinya
    • Journal Title

      Physical Review E

      Volume: 100 Issue: 4 Pages: 042403-042403

    • DOI

      10.1103/physreve.100.042403

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K20382, KAKENHI-PROJECT-18H03979
  • [Journal Article] Reconstruction of global regulatory network from signaling to cellular functions using phosphoproteomic data2018

    • Author(s)
      Kawata Kentaro、Yugi Katsuyuki、Hatano Atsushi、Kokaji Toshiya、Tomizawa Yoko、Fujii Masashi、Uda Shinsuke、Kubota Hiroyuki、Matsumoto Masaki、Nakayama Keiichi I.、Kuroda Shinya
    • Journal Title

      Genes to Cells

      Volume: 24 Issue: 1 Pages: 82-93

    • DOI

      10.1111/gtc.12655

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H05215, KAKENHI-PUBLICLY-18H04801, KAKENHI-PROJECT-16K12508, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-18H02431, KAKENHI-PROJECT-15H05582, KAKENHI-PLANNED-16H06577, KAKENHI-PLANNED-18H05431
  • [Journal Article] In?Vivo Decoding Mechanisms of the Temporal Patterns of Blood Insulin by the Insulin-AKT Pathway in the Liver2018

    • Author(s)
      Kubota Hiroyuki、Uda Shinsuke、Matsuzaki Fumiko、Yamauchi Yukiyo、Kuroda Shinya
    • Journal Title

      Cell Systems

      Volume: 7 Issue: 1 Pages: 1-11

    • DOI

      10.1016/j.cels.2018.05.013

    • Peer Reviewed
    • Data Source
      KAKENHI-PUBLICLY-18H04801, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300, KAKENHI-PLANNED-16H06577
  • [Journal Article] Trans-omic Analysis Reveals Selective Responses to Induced and Basal Insulin across Signaling, Transcriptional, and Metabolic Networks2018

    • Author(s)
      Kawata Kentaro、Hatano Atsushi、Yugi Katsuyuki、Kubota Hiroyuki、Sano Takanori、Fujii Masashi、Tomizawa Yoko、Kokaji Toshiya、Tanaka Kaori Y.、Uda Shinsuke、Suzuki Yutaka、Matsumoto Masaki、Nakayama Keiichi I.、Saitoh Kaori、Kato Keiko、Ueno Ayano、Ohishi Maki、Hirayama Akiyoshi、Soga Tomoyoshi、Kuroda Shinya
    • Journal Title

      iScience

      Volume: 7 Pages: 212-229

    • DOI

      10.1016/j.isci.2018.07.022

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18H05215, KAKENHI-PUBLICLY-17H06011, KAKENHI-PLANNED-17H06301, KAKENHI-PUBLICLY-18H04801, KAKENHI-ORGANIZER-18H05428, KAKENHI-PROJECT-18H04000, KAKENHI-PROJECT-16H04730, KAKENHI-PROJECT-16K12508, KAKENHI-PROJECT-17K19606, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-15H05582, KAKENHI-PLANNED-16H06577
  • [Journal Article] Automatic Quantitative Segmentation of Myotubes Reveals Single-cell Dynamics of S6 Kinase Activation2018

    • Author(s)
      Inoue Haruki、Kunida Katsuyuki、Matsuda Naoki、Hoshino Daisuke、Wada Takumi、Imamura Hiromi、Noji Hiroyuki、Kuroda Shinya
    • Journal Title

      Cell Struct. Funct.

      Volume: 43 Issue: 2 Pages: 153-169

    • DOI

      10.1247/csf.18012

    • NAID

      130007472951

    • ISSN
      0386-7196, 1347-3700
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17H03654, KAKENHI-PROJECT-16K19028, KAKENHI-PROJECT-18H03979
  • [Journal Article] Dynamic Metabolomics Reveals that Insulin Primes the Adipocyte for Glucose Metabolism2017

    • Author(s)
      James R. Krycer, Satoshi Ohnoら全21名
    • Journal Title

      Cell Reports

      Volume: 21 Issue: 12 Pages: 3536-3547

    • DOI

      10.1016/j.celrep.2017.11.085

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K14864, KAKENHI-PROJECT-15H05582, KAKENHI-PROJECT-15K21364, KAKENHI-PLANNED-17H06300
  • [Journal Article] In vitro reconstitution of a CaMKII memory switch by an NMDA receptor-derived peptide.2014

    • Author(s)
      Urakubo, H., Sato, M., Ishii, S., & Kuroda, S.
    • Journal Title

      Biophysical Journal

      Volume: 106 Issue: 6 Pages: 1414-1420

    • DOI

      10.1016/j.bpj.2014.01.026

    • NAID

      120005434969

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-22115012, KAKENHI-PROJECT-23700371, KAKENHI-PROJECT-24241067
  • [Journal Article] Robustness and Compensation of Information of Signaling Pathways.2013

    • Author(s)
      Shinsuke Uda, Takeshi H Saito, Takamasa Kudo, Toshiya Kokaji, Takaho Tsuchiya, Hiroyuki Kubota, Yasunori Komori, Yu-ichi Ozaki, and Shinya Kuroda
    • Journal Title

      Science

      Volume: 341 Issue: 6145 Pages: 558-561

    • DOI

      10.1126/science.1234511

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-24241067, KAKENHI-PROJECT-25830142
  • [Journal Article] The selective control of glycolysis, gluconeogenesis and glycogenesis by temporal insulin patterns2013

    • Author(s)
      Noguchi, R., Kubota, H., Yugi, K., Toyoshima, Y., Komori, Y., Soga, T., Kuroda, S.
    • Journal Title

      Mol Syst Biol.

      Volume: 9 Issue: 1 Pages: 664-664

    • DOI

      10.1038/msb.2013.19

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-22134007, KAKENHI-PROJECT-24241067
  • [Journal Article] The Extraction of Simple Relationships in Growth Factor-Specific Multiple-Input And Multiple-Output Systems in Cell-Fate Decisions by Backward Elimination PLS Regression.2013

    • Author(s)
      Yuki Akimoto, Katsuyuki Yugi, Shinsuke Uda, Takamasa Kudo, Yasunori Komori, Hiroyuki Kubota and Shinya Kuroda
    • Journal Title

      PLoS ONE

      Volume: 8(9) Issue: 9 Pages: e72780-e72780

    • DOI

      10.1371/journal.pone.0072780

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-24241067
  • [Journal Article] Temporal Decoding of MAP Kinase and CREB Phosphorylation by Selective Immediate Early Gene Expression2013

    • Author(s)
      Takeshi H. Saito, Shinsuke Uda, Takaho Tsuchiya, Yu-ichi Ozaki and Shinya Kuroda
    • Journal Title

      PloS One

      Volume: 8(3) Issue: 3 Pages: e57037-e57037

    • DOI

      10.1371/journal.pone.0057037

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-11J10441, KAKENHI-PROJECT-24241067
  • [Journal Article] The Selective Control of Glycolysis, Gluconeogenesis and Glycogenesis by Temporal Insulin Patterns2013

    • Author(s)
      Rei Noguchi, Hiroyuki Kubota, Katsuyuki Yugi, Yu Toyoshima, Yasunori Komori, Tomoyoshi Soga and Shinya Kuroda
    • Journal Title

      Molecular Systems Biology

      Volume: 未定

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-24241067
  • [Journal Article] Sensitivity control through attenuation of signal transfer efficiency by negative regulation of cellular signaling2012

    • Author(s)
      Toyoshima, Y., Kakuda, H., Fujita, K.,Uda, S. and Kuroda, S.
    • Journal Title

      Nature.Communications

      Volume: 3(473) Issue: 1

    • DOI

      10.1038/ncomms1745

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Journal Article] Latent process genes for cell differentiation are common decoders of neurite extension length2012

    • Author(s)
      Watanabe, K., Akimoto, Y., Yugi, K., Uda, S., Chung, J., Nakamuta, S., Kaibuchi K., Kuroda, S.
    • Journal Title

      Journal of Cell Science

      Volume: (in press)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Journal Article] Sensitivity control through attenuation of signal transfer efficiency by negative regulation of cellular signaling2012

    • Author(s)
      Toyoshima, Y., Kakuda, H., Fujita, K., Uda, S., Kuroda, S.
    • Journal Title

      Nature Communications

      Volume: 3 Pages: 743-743

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Journal Article] Temporal Coding of Insulin Action through Multiplexing of the AKT Pathway2012

    • Author(s)
      Hiroyuki Kubota, Rei Noguchi, Yu Toyoshima, Yu-ichi Ozaki, Shinsuke Uda, Kanako Watanabe, Wataru Ogawa and Shinya Kuroda
    • Journal Title

      Molecular Cell

      Volume: 46(6) Issue: 6 Pages: 820-832

    • DOI

      10.1016/j.molcel.2012.04.018

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-11J06435, KAKENHI-PROJECT-21240025, KAKENHI-PROJECT-22700310, KAKENHI-PROJECT-24390234
  • [Journal Article] Latent process genes for cell differentiation are common decoders of neurite extension length2012

    • Author(s)
      Watanabe, K.
    • Journal Title

      J Cell Sci

      Volume: 125 Pages: 2198-211

    • DOI

      10.1242/jcs.097709

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20227006, KAKENHI-PROJECT-21240025, KAKENHI-PUBLICLY-23123507
  • [Journal Article] Analysis of Development of Direction Selectivity in Retinotectum by a Neural Circuit Model with Spike Timing-Dependent Plasticity.2011

    • Author(s)
      Honda, M., Urakubo, H., Tanaka, K., Kuroda, S.
    • Journal Title

      The Journal of Neuroscience

      Volume: 31(4) Pages: 1516-1527

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Analysis of Development of Direction Selectivity in Retinotectum by a Neural Circuit Model with Spike Timing-Dependent Plasticity2011

    • Author(s)
      Honda, M., Urakubo, H., Tanaka, K., Kuroda, S.
    • Journal Title

      J.Neurosci. 31(4)

      Pages: 1516-1527

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Timing-Dependent Actions of NGF Required for Cell Differentiation2010

    • Author(s)
      Jaehoon Chung, Hiroyuki Kubota, Yu-ichi Ozaki, Shinsuke Uda, Shinya Kuroda
    • Journal Title

      PLoS ONE 5

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Journal Article] Decoupling of Receptor and Downstream Signals in the Akt Pathway by Its Low-Pass Filter Characteristics.2010

    • Author(s)
      Fujita, K., Toyoshima, Y., Uda, S., Ozaki, Y., Kubota, H. and Kuroda, S.
    • Journal Title

      Science Signaling

      Volume: 3(132) Issue: 132 Pages: 56-56

    • DOI

      10.1126/scisignal.2000810

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Journal Article] Decoupling of Receptor and Downstream Signals in the Akt Pathway by Its Low-Pass Filter Characteristics.2010

    • Author(s)
      Fujita, K., Toyoshima, Y., Uda, S., Ozaki, Y., Kubota, H., Kuroda, S.
    • Journal Title

      Science Signaling

      Volume: 3(132)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Journal Article] Timing-dependent actions of NGF required for cell differentiation2010

    • Author(s)
      Chung J, Kubota H, Ozaki Y, Uda S, Kuroda S.
    • Journal Title

      PLoS ONE

    • Data Source
      KAKENHI-PROJECT-18200021
  • [Journal Article] A quantitative image cytometry technique for time series or population analyses of signaling networks2010

    • Author(s)
      Ozaki Y, Uda S, Saito TH, Chung J, Kubota H, Kuroda S.
    • Journal Title

      PLoS ONE

    • Data Source
      KAKENHI-PROJECT-18200021
  • [Journal Article] A quantitative image cytometry technique for time series or population analyses of signaling networks2010

    • Author(s)
      Yu-ichi Ozaki, Shinsuke Uda, Takeshi H.Saito, Jaehoon Chung, Hiroyuki Kubota, Shinya Kuroda
    • Journal Title

      PLoS ONE (in press)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Journal Article] Specific features of transient Ras and sustained Rapl activation2009

    • Author(s)
      Ozaki, Y., Uda, S., Kuroda, S.
    • Journal Title

      In Systems Biology, the Challenge of Complexity Springer

      Pages: 121-127

    • Data Source
      KAKENHI-PROJECT-18200021
  • [Journal Article] Experimental and computational aspects of signaling mechanisms of spike-timing-dependent plasticity2009

    • Author(s)
      Hidetoshi Urakubo, Minoru Honda, Keiko Tanaka, Shinya Kuroda
    • Journal Title

      HFSP Journal 3

      Pages: 240-254

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Experimental and computational aspects of signaling mechanisms of spike-timing-dependent plasticity2009

    • Author(s)
      Urakubo, H., Honda, M., Tanaka, K., Kuroda, S.
    • Journal Title

      HFSP Journal 3

      Pages: 240-254

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Requirement of an allosteric kinetics of NMDA receptors for spike-timing-dependent plasticity2008

    • Author(s)
      Urakubo, H., Honda, M., Froemke, R.C., Kuroda, S.
    • Journal Title

      J.Neurosci. 28

      Pages: 3310-3323

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] A Mass Conserved Reaction--Diffusion System Captures Properties of Cell Polarity2007

    • Author(s)
      Otsuji, M., Ishihara, S., Co C., Kaibuchi, K., Mochizuki, A., Kuroda, S.
    • Journal Title

      PLoS. Comput. Biol. 3

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Ca2+-independent phospholipase A2-dependent sustained Rho-kinase activation exhibits all-or-none response2006

    • Author(s)
      Maeda, A., Ozaki, Y., Sivakumaran, S., Akiyama, T., Urakubo, H., Usami, A., Sato, M., Kaibuchi, K., Kuroda, S.
    • Journal Title

      Genes Cells 11

      Pages: 1071-1083

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Dynamic characteristics of transient responses2005

    • Author(s)
      Ozaki, Y., Sasagawa, S., Kuroda, S.
    • Journal Title

      J.Biochem. 137

      Pages: 659-663

    • NAID

      10017345350

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Prediction and validation of the distinct dynamics of transient and sustained ERK activation2005

    • Author(s)
      Sasagawa, S., Ozaki, Y. Fujita, K., Kuroda, S.
    • Journal Title

      Nat.Cell Biol. 7

      Pages: 365-373

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Journal Article] Inositol 1,4,5-trisphosphate-dependent Ca2+ threshold dynamics detect spike timing in cerebellar Purkinje cells2005

    • Author(s)
      Doi, T., Kuroda, S., Michikawa, T., Kawato, M.
    • Journal Title

      J.Neurosci. 25(4)

      Pages: 950-961

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Patent] 測定対象分子の定量的解析方法及び装置2010

    • Inventor(s)
      尾崎裕一, 黒田真也
    • Industrial Property Rights Holder
      尾崎裕一, 黒田真也
    • Industrial Property Number
      2010-050910
    • Filing Date
      2010-03-08
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] トランスオミクスによる肝臓での糖応答システムの解析2023

    • Author(s)
      黒田 真也
    • Organizer
      東海糖尿病代謝連携懇話会学術講演会
    • Invited
    • Data Source
      KAKENHI-ORGANIZER-23H04939
  • [Presentation] トランスオミクスによる肝臓での糖応答システムの解析2023

    • Author(s)
      黒田 真也
    • Organizer
      東海糖尿病代謝連携懇話会学術講演会
    • Invited
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] Transomic network analysis of glucose metabolism and its dysfunction associated with obesity2023

    • Author(s)
      Shinya Kuroda
    • Organizer
      5th MHRC symposium at SIMS
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-ORGANIZER-23H04939
  • [Presentation] トランスオミクスによる肝臓での糖応答システムの解析2023

    • Author(s)
      黒田 真也
    • Organizer
      第30回 日本遺伝子診療学会大会・第8回クリニカルバイオバンク学会
    • Invited
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] トランスオミクスによる肝臓での糖応答システムの解析2023

    • Author(s)
      黒田 真也
    • Organizer
      第30回 日本遺伝子診療学会大会・第8回クリニカルバイオバンク学会
    • Invited
    • Data Source
      KAKENHI-ORGANIZER-23H04939
  • [Presentation] Transomic network analysis of glucose metabolism and its dysfunction associated with obesity2023

    • Author(s)
      Shinya Kuroda
    • Organizer
      5th MHRC symposium at SIMS
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] Kinetic transomic analysis reveals time- and dose-dependent selective glucose metabolism for glucose homeostasis and energy conversion in the liver2023

    • Author(s)
      Yifei Pan , Atsushi Hatano , Satoshi Ohno , Keigo Morita , Toshiya Kokaji , Atsushi J. Nagano ,Akiyoshi Hirayama , Tomoyoshi Soga and Shinya Kuroda
    • Organizer
      ICSB 2023(The 22nd International Conference on Systems Biology)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity2023

    • Author(s)
      Yunfan Bai, Keigo Morita, Toshiya Kokaji, Akiyoshi Hirayama, Tomoyoshi Soga and Shinya Kuroda
    • Organizer
      ICSB 2023(The 22nd International Conference on Systems Biology)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] The roles of inter- and intra-cellular variations in cellular information transfer2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      Workshop on Non-equilibrium Phenomena in Physics and Biology (NE-PB2022)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H03979
  • [Presentation] Systems Biology of Insulin Action2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      Biomedical Mathematics Online Colloquium
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] ストラクチャオーム/ structurome オミクスワイドのタンパク質立体構造(ストラクチャオーム)に向けて Toward an omics-wide protein structure (structurome)2022

    • Author(s)
      黒田 真也
    • Organizer
      第45回 日本分子生物学会年会
    • Invited
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] Systems Biology of Insulin Action2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      Biomedical Mathematics Online Colloquium
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H03979
  • [Presentation] 骨格筋のシステムバイオロジー:代謝トランスオミクスと情報誌論解析2022

    • Author(s)
      黒田 真也
    • Organizer
      第9回骨格筋生物学研究会
    • Invited
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] The roles of inter- and intra-cellular variations in cellular information transfer2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      Workshop on Non-equilibrium Phenomena in Physics and Biology (NE-PB2022)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] Transomic network analysis of glucose metabolism and its dysfunction associated with obesity2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      The 21th International Conference on Systems Biology (ICSB) 2022
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H03979
  • [Presentation] Transomic network analysis of glucose metabolism and its dysfunction associated with obesity2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      The 21th International Conference on Systems Biology (ICSB) 2022
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] 骨格筋のシステムバイオロジー:代謝トランスオミクスと情報誌論解析2022

    • Author(s)
      黒田 真也
    • Organizer
      第9回骨格筋生物学研究会
    • Invited
    • Data Source
      KAKENHI-PROJECT-18H03979
  • [Presentation] 骨格筋のシステムバイオロジー:代謝トランスオミクスと情報誌論解析2022

    • Author(s)
      黒田 真也
    • Organizer
      第9回骨格筋生物学研究会
    • Invited
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] ストラクチャオーム/ structurome オミクスワイドのタンパク質立体構造(ストラクチャオーム)に向けて Toward an omics-wide protein structure (structurome)2022

    • Author(s)
      黒田 真也
    • Organizer
      第45回 日本分子生物学会年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] Systems Biology of Insulin Action2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      Biomedical Mathematics Online Colloquium
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] Transomic network analysis of glucose metabolism and its dysfunction associated with obesity2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      The 21th International Conference on Systems Biology (ICSB) 2022
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] The roles of inter- and intra-cellular variations in cellular information transfer2022

    • Author(s)
      Shinya Kuroda
    • Organizer
      Workshop on Non-equilibrium Phenomena in Physics and Biology (NE-PB2022)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] トランスオミクスによる肝臓での糖応答システムの解析2021

    • Author(s)
      黒田 真也
    • Organizer
      第94回日本内分泌学会学術集会The 94th Annual Congress of the Japan Endocrine Society
    • Invited
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] トランスオミクスによる肝臓での糖応答システムの解析2021

    • Author(s)
      黒田 真也
    • Organizer
      第94回日本内分泌学会学術集会The 94th Annual Congress of the Japan Endocrine Society
    • Data Source
      KAKENHI-PROJECT-18H03979
  • [Presentation] インスリン作用のトランスオミクスネットワーク2021

    • Author(s)
      黒田 真也
    • Organizer
      第64回日本糖尿病学会年次学術集会
    • Invited
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] インスリン作用のトランスオミクスネットワーク2021

    • Author(s)
      黒田 真也
    • Organizer
      第64回日本糖尿病学会年次学術集会The 64th Annual Meeting of the Japan Diabetes Society
    • Data Source
      KAKENHI-PROJECT-18H03979
  • [Presentation] トランスオミクスによる肝臓での糖応答システムの解析2021

    • Author(s)
      黒田 真也
    • Organizer
      第94回日本内分泌学会学術集会
    • Invited
    • Data Source
      KAKENHI-PROJECT-21H04759
  • [Presentation] インスリン作用のトランスオミクスネットワーク2021

    • Author(s)
      黒田 真也
    • Organizer
      第64回日本糖尿病学会年次学術集会The 64th Annual Meeting of the Japan Diabetes Society
    • Invited
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] Trans-omic analysis of the liver of lean and obese mice during an oral glucose challenge2019

    • Author(s)
      黒田 真也
    • Organizer
      第92回日本生化学会大会
    • Data Source
      KAKENHI-ORGANIZER-17H06299
  • [Presentation] Trans-omic Analysis of Insulin Action2019

    • Author(s)
      Shinya Kuroda
    • Organizer
      The 20th International Conference on Systems Biology (ICSB) 2019
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-ORGANIZER-17H06299
  • [Presentation] トラ ンスオミクスによる肝臓での糖応答システムの解析2019

    • Author(s)
      黒田 真也
    • Organizer
      第62回日本糖尿病学会年次学術集会
    • Data Source
      KAKENHI-ORGANIZER-17H06299
  • [Presentation] 血中ホルモンによる血糖ホメオスタシスの数理モデルを用いた血糖摂取のロジカルデザイン2017

    • Author(s)
      黒田真也
    • Organizer
      ConBio2017
    • Invited
    • Data Source
      KAKENHI-ORGANIZER-17H06299
  • [Presentation] Systems biology of insulin action2017

    • Author(s)
      Shinya Kuroda
    • Organizer
      Hunter meeting
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] Trans-Omics analysis of the liver of lean and obese mice during an oral glucose administration2017

    • Author(s)
      Shinya Kuroda
    • Organizer
      The 1st International Symposium for Trans-Omics
    • Int'l Joint Research
    • Data Source
      KAKENHI-ORGANIZER-17H06299
  • [Presentation] Trans-Omics analysis of the liver of lean and obese mice during an oral glucose administration2017

    • Author(s)
      Shinya Kuroda
    • Organizer
      The 1st International Symposium for Trans-Omics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] 血中ホルモンによる血糖ホメオスタシスの数理モデルを用いた血糖摂取のロジカルデザイン2017

    • Author(s)
      黒田真也
    • Organizer
      ConBio2017
    • Invited
    • Data Source
      KAKENHI-PLANNED-17H06300
  • [Presentation] Systems biology of insulin action2017

    • Author(s)
      Shinya Kuroda
    • Organizer
      Hunter meeting
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-ORGANIZER-17H06299
  • [Presentation] The Selective Control of Glycolysis, Gluconeogenesis and Glycogenesis by Temporal Insulin Patterns2013

    • Author(s)
      Rei Noguchi, Hiroyuki Kubota, Katsuyuki Yugi, Yu Toyoshima, Yasunori Komori, Tomoyoshi Soga and Shinya Kuroda
    • Organizer
      Keystone Symposia Conference:PI3-Kinase and Interplay with Other Signaling Pathway (X3)
    • Place of Presentation
      Colorado, USA
    • Data Source
      KAKENHI-PROJECT-24241067
  • [Presentation] Information coding of ERK signaling networks2013

    • Author(s)
      Shinya Kuroda
    • Organizer
      The 35th IEEE-EMBC2013
    • Place of Presentation
      大阪・大阪国際会議場
    • Data Source
      KAKENHI-PROJECT-24241067
  • [Presentation] トランスオミクスへ向けた定量生物学2013

    • Author(s)
      Shinya Kuroda
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸・神戸ポートピアホテル
    • Data Source
      KAKENHI-PROJECT-24241067
  • [Presentation] Temporal Cording of Insulin Action through Multiplexing of the AKT Pathway2012

    • Author(s)
      久保田浩行、野口怜、豊島有、尾崎裕一、 宇田新介、渡邊可奈子、小川渉、 黒田真也
    • Organizer
      Joint meeting of JSDB 45th & JSCB64th
    • Place of Presentation
      神戸(神戸国際会議場)
    • Year and Date
      2012-05-29
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] PLS regression analysis of Signal transduction network and phenotypes in PC12 cell2012

    • Author(s)
      Yu-ki Akimoto, Katsuyuki Yugi, Shinsuke Uda, Kanako Watanabe, Takeshi H Saito and Shinya Kuroda
    • Organizer
      ICSB2012 The 13th International Conference on Systems Biology
    • Place of Presentation
      Toronto, Canada
    • Data Source
      KAKENHI-PROJECT-24241067
  • [Presentation] AKT経路の情報多重化によるインスリン作用の時間情報コード2012

    • Author(s)
      久保田浩行、野口怜、豊島有、尾崎裕一、 宇田新介、渡邊可奈子、小川渉、 黒田真也
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡(福岡国際会議場)
    • Year and Date
      2012-12-12
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] ERK経路の情報コード2012

    • Author(s)
      黒田真也
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋(名古屋大学)
    • Year and Date
      2012-09-21
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] インスリン作用のAKT経路による多重情報コード2011

    • Author(s)
      黒田真也、久保田浩行
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都
    • Year and Date
      2011-09-21
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] イ ンスリン作用の AKT 経路による多重情報 コード2011

    • Author(s)
      黒田真也
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      京都(国立京都国際会館)
    • Year and Date
      2011-09-21
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] Temporal coding of ERK and Akt signaling pathway2010

    • Author(s)
      黒田真也
    • Organizer
      第13回国際細胞膜研究フォーラム
    • Place of Presentation
      招待講演、京都
    • Year and Date
      2010-01-27
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Temporal coding of ERK and AKT signaling networks2010

    • Author(s)
      黒田真也
    • Organizer
      2010年日本バイオインフォマティクス学会年会
    • Place of Presentation
      福岡(九州大学医学部百年講堂)
    • Year and Date
      2010-12-14
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] Temporal coding of ERK and AKT signaling pathway2010

    • Author(s)
      Shinya Kuroda
    • Organizer
      Shanghai, Invited
    • Place of Presentation
      Sino-Japan Workshop
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Temporal coding of ERK and AKT signaling networks2010

    • Author(s)
      黒田真也
    • Organizer
      2010年日本バイオインフォマティクス学会会
    • Place of Presentation
      福岡(九州大学医学部百年講堂)
    • Year and Date
      2010-12-14
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] Emerging direction sensitivity through STDP in a model of Xenopus visual system2010

    • Author(s)
      Honda, M., Urakubo, H., Kuroda, S.
    • Organizer
      Neuro2010
    • Place of Presentation
      神戸(神戸コンベンションセンター)
    • Year and Date
      2010-09-04
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] Temporal coding of Akt signaling networks2009

    • Author(s)
      Shinva Kuroda, Kazuhiro Fujita, Yu Toyoshima
    • Organizer
      Dynamics of signal transduction and of gene-protein regulatory networks
    • Place of Presentation
      Ohio, USA Oral, Poster
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Low-pass filter characteristics of the Akt pathway decouple EGF receptor and downstream phosphorylation2009

    • Author(s)
      Fujita, K., Toyoshima, Y., Uda, S., Ozaki, Y., Kubota, H. Kuroda, S.
    • Organizer
      The 10th International Conference on Systems Biology
    • Place of Presentation
      CA, USA, Poster
    • Year and Date
      2009-08-30
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Acquirement of direction selectivity through STDP in retinotectum2009

    • Author(s)
      Honda, M., Urakubo, H., Kuroda, S.
    • Organizer
      第32回日本神経科学大会
    • Place of Presentation
      名古屋
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] NGF-dependent differentiation requires two distinct processes ; ERK-and transcription- driven protentiation process and ERK-and P13K-driven neurtie-extension process2009

    • Author(s)
      Jaehoon Chung, Hiroyuki Kubota, Yu-ichi Ozaki, Shinsuke Uda. Shinva Kuroda
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      ポスター、横浜
    • Year and Date
      2009-12-12
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Tsukuba, Invited Temporal coding of ERK and AKT signaling pathway2009

    • Author(s)
      Shinya Kuroda
    • Organizer
      International symposium on cellular signaling-principles and functions-
    • Place of Presentation
      Tsukuba, Invited
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] High throughput quantification of single cellular signaling events by use of immunostaining and image cytometry2009

    • Author(s)
      Yu-ichi Ozaki, Shinsuke Uda, Takeshi Saito, Chung Jeahoon, Hiroyuki Kubota, Shinva Kuroda
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      招待講演、口頭、横浜
    • Year and Date
      2009-12-11
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] ERK経路のシステム生物学2009

    • Author(s)
      黒田真也, 尾崎裕一
    • Organizer
      第9回日本蛋白質科学会年会
    • Place of Presentation
      熊本
    • Year and Date
      2009-05-22
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Systems analysis of ERK signaling networks using automated immunofluorescent cytometry2009

    • Author(s)
      Shines Kuroda, Yu-ichi Ozaki
    • Organizer
      Computational Cell Biology
    • Place of Presentation
      Cold Spring Harbor, NY, USA, Oral
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] システムズバイオロジー : 本質は複雑でなくシンプル!2009

    • Author(s)
      黒田真也
    • Organizer
      第61回日本細胞生物学会大会
    • Place of Presentation
      口頭・招待講演演、名古屋
    • Year and Date
      2009-06-02
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] ERK経路のシステム生物学2009

    • Author(s)
      黒田真也, 尾崎裕一
    • Organizer
      第9回日本蛋白質科学会年会
    • Place of Presentation
      口頭・招待講演、熊本
    • Year and Date
      2009-05-22
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Temporal coding of ERK signaling network2008

    • Author(s)
      Shinya Kuroda
    • Organizer
      NIBB-EMBL-CRG Workshop on Systems Biology
    • Place of Presentation
      Barcelona
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Encoding of Visual Information into Neuronal Networks by Spike-Timing Dependent Synaptic plasticity2008

    • Author(s)
      Honda, M., Urakubo, H., Kuroda, S.
    • Organizer
      The Japan-Taiwan Young Researchers Conference on Computational and Systems Biology
    • Place of Presentation
      Taiwan
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] Systems biology of spike-timing dependent synaptic plasticity2008

    • Author(s)
      黒田 真也
    • Organizer
      日本生理学会大会
    • Place of Presentation
      新宿、日本
    • Year and Date
      2008-03-26
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] Simulation Analysis of Spike-Timing Dependent Synaptic Plasticity from Signal Transduction Pathway to Visual Neuronal Network2008

    • Author(s)
      Honda, M., Urakubo, H., Kuroda, S.
    • Organizer
      The 2nd Taiwan-Japan Young Researchers Conference on Computational and System Biology
    • Place of Presentation
      Tokyo
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] Temporal coding of ERK signaling networks2008

    • Author(s)
      Shines Kuroda
    • Organizer
      FCSB2008 International Workshop on Future Challenges for Systems Biology
    • Place of Presentation
      Tokyo
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Systems biology of Spike-Timing Dependent synaptic Plasticity2008

    • Author(s)
      黒田真也、浦久保秀俊、本田稔、Robert C.Froemke
    • Organizer
      第85回日本生理学会大会
    • Place of Presentation
      東京
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] Systems biology of ERK signaling networks2008

    • Author(s)
      Shines Kuroda
    • Organizer
      Japan-Taiwan Young Researchers Conference on Computational and Systems Biology
    • Place of Presentation
      Taiwan
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] Systems analysis of ERK signaling network using automated immunofluorescence method2008

    • Author(s)
      尾崎裕一, 黒田真也
    • Organizer
      第31回日本分子生物学会年会 第81回日本生化学会大会 合同大会 (BMB2008)
    • Place of Presentation
      口頭
    • Year and Date
      2008-12-10
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] スパイクタイミング依存シナプス可塑性のタイミング検知メカニズム2007

    • Author(s)
      浦久保秀俊、本田稔、Robert C.Froemke、黒田真也
    • Organizer
      生命科学研究ネットワークシンポジウム2007
    • Place of Presentation
      東京
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] Temporal coding of ERK signaling network2007

    • Author(s)
      黒田 真也
    • Organizer
      2007EPA International Science Forum
    • Place of Presentation
      Durham,NC,USA
    • Year and Date
      2007-05-15
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] ERK経路のシステム生物学2007

    • Author(s)
      黒田真也, 尾崎裕一
    • Organizer
      第30回日本分子生物学会年会, 第80回日本生化学会大会 合同大会
    • Place of Presentation
      招待講演
    • Year and Date
      2007-12-11
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] 細胞成長を制御するシグナル伝達機構の定量的解析2007

    • Author(s)
      藤田一広、黒田真也
    • Organizer
      第30回日本分子生物学会年会・第80回日本生化学会大会合同大会
    • Place of Presentation
      横浜
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] Prediction and validation of a novel allosteric kinetics of NMDARs as a spike-timing detector2007

    • Author(s)
      Kuroda, S., Urakubo, H., Robert C.Froemke
    • Organizer
      Cosyne 2007 meeting
    • Place of Presentation
      Salt Lake, USA
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] 自動化免疫染色法を用いたERK経路のシステム解析2007

    • Author(s)
      尾崎裕一, 黒田真也
    • Organizer
      第30回日本分子生物学会年会, 第80回日本生化学会大会 合同大会
    • Place of Presentation
      ポスター
    • Year and Date
      2007-12-11
    • Data Source
      KAKENHI-PROJECT-18200021
  • [Presentation] An allosteric kinetics of NMDA receptors required for spike timing-dependent plasticity2007

    • Author(s)
      Urakubo, H., Honda, M., Robert C. Froemke., Kuroda, S.
    • Organizer
      The 37th annual meeting of the Society for Neuroscience
    • Place of Presentation
      San Diego, USA
    • Data Source
      KAKENHI-PROJECT-17017005
  • [Presentation] AKT経路の情報多重化によるインスリン作用の時間情報コード

    • Author(s)
      久保田浩行、野口怜、豊島有、尾崎裕一、宇田新介、渡邉可奈子、小川渉、黒田真也
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡・福岡国際会議場
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] ERK経路の情報コード

    • Author(s)
      黒田真也
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋・名古屋大学
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] Temporal Coding of Insulin Action through Multiplexing of the AKT Pathway

    • Author(s)
      久保田浩行、野口怜、豊島有、尾崎裕一、宇田新介、渡邉可奈子、小川渉、黒田真也
    • Organizer
      Joint meeting of JSDB 45th & JSCB 64th
    • Place of Presentation
      神戸・神戸国際会議場
    • Data Source
      KAKENHI-PROJECT-21240025
  • [Presentation] Systems-level analysis of dynamic regulation of glucose metabolism by insulin in Fao hepatoma cells

    • Author(s)
      野口怜、久保田浩行、柚木克之、豊島有、曽我朋義、黒田真也
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      福岡・福岡国際会議場
    • Data Source
      KAKENHI-PROJECT-24241067
  • [Presentation] Unbiased identification of global network for signaling and metabolism from trans-omic data

    • Author(s)
      黒田真也、柚木克之、久保田浩行、曽我朋義、中山敬一
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      福岡・福岡国際会議場
    • Data Source
      KAKENHI-PROJECT-24241067
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