Shinkai Soya 新海創也

… Alternative Names

SHINKAI Soya 新海創也

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Researcher Number	60547058
Other IDs	https://orcid.org/0000-0001-6852-2751
Affiliation (Current)	2025: 国立研究開発法人理化学研究所, 生命機能科学研究センター, 上級研究員
Affiliation (based on the past Project Information) *help	2022 – 2024: 国立研究開発法人理化学研究所, 生命機能科学研究センター, 上級研究員 2018 – 2022: 国立研究開発法人理化学研究所, 生命機能科学研究センター, 研究員 2017: 国立研究開発法人理化学研究所, 生命システム研究センター, 研究員 2016: 広島大学, 理学研究科, 特任助教 2015: 広島大学, 大学院理学研究科, 特任助教 2011: 神戸大学, 大学院・システム情報学研究科, 学術研究員
Review Section/Research Field	Principal Investigator Transformative Research Areas, Section (III) / Biological Sciences / Complex systems / System genome science Except Principal Investigator Basic Section 43060:System genome science-related / Medium-sized Section 50:Oncology and related fields / Biological Sciences / Mathematical physics/Fundamental condensed matter physics
Keywords	Principal Investigator 高分子モデリング / 染色体構造 / クロマチン / ゲノム動態 / ゲノム構造 / Hi-C / クロマチン構造 / 染色体動態 / 高分子粘弾性 / SMC複合体 … More / 粘弾性 / 流体力学的相互作用 / レオロジー / クロマチン動態 / 温度イメージング / 蛍光寿命イメージング / フラクタル次元 / 計算物理 / ゲノム情報 / 生物物理 … More Except Principal Investigator クロマチン / 転写 / 数理モデル / FISH / ライブイメージング / 数理モデリング / 高次ゲノム構造 / 転写制御のゆらぎ / 超解像イメージング解析 / がんのイニシエイション / HRAS / クロマチン構造 / 1分子時系列解析 / Dynamic Disorder / 細胞個性 / 情報幾何学 / 少数性生物学 / 数理モデル化 / １分子時系列解析 / 分子個性・細胞個性 / 複雑ネットワーク / 反応拡散系 / 生体高分子 / 生物物理学 / 1/fスペクトルゆらぎ / 対数ワイブル則 / アーノルド拡散 / 異常拡散 / 大偏差特性 / 無限測度エルゴード性 / ハミルトン系カオス / 非平衡・非線形物理学 / 非線形物理学 / 非平衡 Less

Modality of chromatin viscoelasticity and loop formation based on Hi-C dataPrincipal Investigator
- Principal Investigator
  
  新海創也
- Project Period (FY)
  2023 – 2024
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Institute of Physical and Chemical Research
クロマチンの運動性から捉える転写制御のゆらぎとがん細胞の悪性化
- Principal Investigator
  
  野澤竜介
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 50:Oncology and related fields
- Research Institution
  Japanese Foundation for Cancer Research
Elucidation of the correlation between higher-order genome structure dynamics and gene expression
- Principal Investigator
  
  落合博
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43060:System genome science-related
- Research Institution
  Kyushu University
Modality of 3D genome organization in hydrodynamic interactionsPrincipal Investigator
- Principal Investigator
  
  新海創也
- Project Period (FY)
  2021 – 2022
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Institute of Physical and Chemical Research
Genome information physics based on microrheology of the 3D genome organizationPrincipal Investigator
- Principal Investigator
  
  新海創也
- Project Period (FY)
  2020 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Institute of Physical and Chemical Research
Polymer modeling for 3D chromosome structure with a deep learning and 4D simulationPrincipal Investigator
- Principal Investigator
  
  新海創也
- Project Period (FY)
  2018 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Institute of Physical and Chemical Research
Interactions within chromatin domains by a mathematical model of chromosomes with epigenetic informationPrincipal Investigator
- Principal Investigator
  
  新海創也
- Project Period (FY)
  2016 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Institute of Physical and Chemical Research
  Hiroshima University
Simultaneous imaging of chromatin fractal dimensions and temperature in living cell nucleusPrincipal Investigator
- Principal Investigator
  
  Shinkai Soya
- Project Period (FY)
  2016 – 2017
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  System genome science
- Research Institution
  Institute of Physical and Chemical Research
  Hiroshima University
Constructing a theoretical framework to study reaction networks involving a small number of molecules: modeling with consideration of minority and hierarchy
- Principal Investigator
  
  TOGASHI Yuichi
- Project Period (FY)
  2011 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Hiroshima University
  Kobe University
Multi ergodicity in nearly integrable Hamiltonian systems and large deviation properties of infinite ergodic systems
- Principal Investigator
  
  AIZAWA Yoji
- Project Period (FY)
  2009 – 2011
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Mathematical physics/Fundamental condensed matter physics
- Research Institution
  Waseda University

[Journal Article] Transcription-coupled changes in higher-order genomic structure and transcription hub viscosity prolong enhancer-promoter connectivity2023
- Author(s)
  Ohishi Hiroaki、Shinkai Soya、Owada Hitoshi、Fujii Takeru、Hosoda Kazufumi、Onami Shuichi、Yamamoto Takashi、Ohkawa Yasuyuki、Ochiai Hiroshi
- Journal Title
  
  bioRxiv
  
  Volume: - Pages: 568629-568629
- DOI
  10.1101/2023.11.27.568629
- Open Access
- Data Source
  KAKENHI-PROJECT-22K15084, KAKENHI-PUBLICLY-22H04694, KAKENHI-PUBLICLY-23H04286, KAKENHI-PUBLICLY-23H04297, KAKENHI-PROJECT-23K23872
[Journal Article] Single‐molecule tracking of Nanog and Oct4 in living mouse embryonic stem cells uncovers a feedback mechanism of pluripotency maintenance2023
- Author(s)
  Okamoto Kazuko、Fujita Hideaki、Okada Yasushi、Shinkai Soya、Onami Shuichi、Abe Kuniya、Fujimoto Kenta、Sasaki Kensuke、Shioi Go、Watanabe Tomonobu M
- Journal Title
  
  The EMBO Journal
  
  Volume: 42 Issue: 18
- DOI
  10.15252/embj.2022112305
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K06201, KAKENHI-PUBLICLY-23H04297, KAKENHI-PROJECT-22H04926, KAKENHI-PROJECT-21H03599
[Journal Article] Centromere/kinetochore is assembled through CENP-C oligomerization2023
- Author(s)
  Hara Masatoshi、Ariyoshi Mariko、Sano Tomoki、Nozawa Ryu-Suke、Shinkai Soya、Onami Shuichi、Jansen Isabelle、Hirota Toru、Fukagawa Tatsuo
- Journal Title
  
  Molecular Cell
  
  Volume: 83 Issue: 13 Pages: 2188-2205.e13
- DOI
  10.1016/j.molcel.2023.05.023
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K19465, KAKENHI-PROJECT-23K18113, KAKENHI-PROJECT-21K06048, KAKENHI-PUBLICLY-22H04692, KAKENHI-PUBLICLY-22H05608, KAKENHI-PUBLICLY-23H04282, KAKENHI-PUBLICLY-23H04297, KAKENHI-PROJECT-22H04996, KAKENHI-PROJECT-22H00408, KAKENHI-PROJECT-20H03190, KAKENHI-PROJECT-21H02461
[Journal Article] Condensed but liquid-like domain organization of active chromatin regions in living human cells2023
- Author(s)
  Nozaki Tadasu、Shinkai Soya、Ide Satoru、Higashi Koichi、Tamura Sachiko、Shimazoe Masa A.、Nakagawa Masaki、Suzuki Yutaka、Okada Yasushi、Sasai Masaki、Onami Shuichi、Kurokawa Ken、Iida Shiori、Maeshima Kazuhiro
- Journal Title
  
  Science Advances
  
  Volume: 9 Issue: 14 Pages: 1-19
- DOI
  10.1126/sciadv.adf1488
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-21H05763, KAKENHI-PROJECT-23K21326, KAKENHI-PROJECT-23KJ0996, KAKENHI-PUBLICLY-23H04297, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00406
[Journal Article] Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells2022
- Author(s)
  Iida Shiori、Shinkai Soya、Itoh Yuji、Tamura Sachiko、Kanemaki Masato T.、Onami Shuichi、Maeshima Kazuhiro
- Journal Title
  
  Science Advances
  
  Volume: 8 Issue: 22
- DOI
  10.1126/sciadv.abn5626
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-21H05763, KAKENHI-PROJECT-21H02453, KAKENHI-PLANNED-18H05412, KAKENHI-ORGANIZER-19H05794, KAKENHI-PLANNED-20H05936
[Journal Article] PHi-C2: interpreting Hi-C data as the dynamic 3D genome state2022
- Author(s)
  Shinkai Soya、Itoga Hiroya、Kyoda Koji、Onami Shuichi
- Journal Title
  
  Bioinformatics
  
  Volume: 38 Issue: 21 Pages: 4984-4986
- DOI
  10.1093/bioinformatics/btac613
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-21H05763, KAKENHI-PLANNED-18H05412, KAKENHI-ORGANIZER-19H05794
[Journal Article] The Rheology of the Dynamic 3D Genome Organization2021
- Author(s)
  SHINKAI Soya
- Journal Title
  
  Seibutsu Butsuri
  
  Volume: 61 Issue: 5 Pages: 293-297
- DOI
  10.2142/biophys.61.293
- NAID
  130008093158
- ISSN
  0582-4052, 1347-4219
- Language
  Japanese
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-20H05550, KAKENHI-PUBLICLY-21H05763, KAKENHI-ORGANIZER-19H05794
[Journal Article] Toward understanding the dynamic state of 3D genome2020
- Author(s)
  Shinkai S, Onami S, Nakato R.
- Journal Title
  
  Computational and Structural Biotechnology Journal
  
  Volume: 18 Pages: 2259-2269
- DOI
  10.1016/j.csbj.2020.08.014
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06331, KAKENHI-PLANNED-18H05412, KAKENHI-PUBLICLY-20H05550, KAKENHI-PROJECT-19K22679
[Journal Article] PHi-C: deciphering Hi-C data into polymer dynamics2020
- Author(s)
  Shinkai Soya、Nakagawa Masaki、Sugawara Takeshi、Togashi Yuichi、Ochiai Hiroshi、Nakato Ryuichiro、Taniguchi Yuichi、Onami Shuichi
- Journal Title
  
  NAR Genomics and Bioinformatics
  
  Volume: 2 Issue: 2
- DOI
  10.1093/nargab/lqaa020
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06612, KAKENHI-PROJECT-17K15050, KAKENHI-PLANNED-17H06331, KAKENHI-PUBLICLY-18H04720, KAKENHI-PLANNED-18H05412, KAKENHI-PROJECT-20K20458, KAKENHI-PLANNED-18H05531, KAKENHI-PROJECT-19H02567
[Journal Article] Microrheology for Hi-C Data Reveals the Spectrum of the Dynamic 3D Genome Organization2020
- Author(s)
  Soya Shinkai, Takeshi Sugawara, Hisashi Miura, Ichiro Hiratani, Shuichi Onami
- Journal Title
  
  Biophysical Journal
  
  Volume: 118 Issue: 9 Pages: 2220-2228
- DOI
  10.1016/j.bpj.2020.02.020
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K15050, KAKENHI-PUBLICLY-18H04720, KAKENHI-PLANNED-18H05412, KAKENHI-PLANNED-18H05530, KAKENHI-PROJECT-20K08698
[Journal Article] Spindle pole body movement is affected by glucose and ammonium chloride in fission yeast2019
- Author(s)
  Ito H, Sugawara T, Shinkai S, Mizukawa S, Kondo A, Senda H, Sawai K, Ito K, Suzuki S, Takaine M, Yoshida S, Imamura H, Kitamura K, Namba T, Tate SI, Ueno M
- Journal Title
  
  Biochem Biophys Res Commun
  
  Volume: 511 Issue: 4 Pages: 820-825
- DOI
  10.1016/j.bbrc.2019.02.128
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K07502, KAKENHI-PROJECT-18K19301, KAKENHI-PROJECT-17K15050, KAKENHI-PUBLICLY-18H04720, KAKENHI-PROJECT-17H03654, KAKENHI-PROJECT-16H04781
[Journal Article] Bridging the dynamics and organization of chromatin domains by mathematical modeling2017
- Author(s)
  Shinkai S, Nozaki T, Maeshima K, Togashi Y
- Journal Title
  
  Nucleus
  
  Volume: 印刷中 Issue: 4 Pages: 353-359
- DOI
  10.1080/19491034.2017.1313937
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K14655, KAKENHI-PUBLICLY-16H01408, KAKENHI-PROJECT-16H04746
[Journal Article] Dynamic Nucleosome Movement Provides Structural Information of Topological Chromatin Domains in Living Human Cells2016
- Author(s)
  Shinkai S, Nozaki T, Maeshima K, Togashi Y
- Journal Title
  
  PLoS Comput Biol
  
  Volume: 12 Issue: 10 Pages: e1005136-e1005136
- DOI
  10.1371/journal.pcbi.1005136
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-16H01408, KAKENHI-PROJECT-16J07205, KAKENHI-PROJECT-16K14655, KAKENHI-PROJECT-16H04746
[Journal Article] Generalized Lyapunov exponent as a unified characterization of dynamical instabilities2015
- Author(s)
  Takuma Akimoto, Masaki Nakagawa, Soya Shinkai, Yoji Aizawa
- Journal Title
  
  Physical Review E
  
  Volume: 91 Issue: 1 Pages: 012926-012926
- DOI
  10.1103/physreve.91.012926
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-23115007, KAKENHI-PROJECT-25400411, KAKENHI-PROJECT-26800204
[Journal Article] Dissipative heat decomposition in stochastic energetics: Implication of the instantaneous diffusion coefficient in nonequilibrium steady states2015
- Author(s)
  Soya Shinkai
- Journal Title
  
  Journal of the Physical Society of Japan
  
  Volume: 84 Issue: 1 Pages: 015001-015001
- DOI
  10.7566/jpsj.84.015001
- NAID
  210000133412
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-23115007
[Journal Article] Analytical theory of individual diffusion trajectories in living cells2015
- Author(s)
  Soya Shinkai
- Journal Title
  
  Advances in Science, Technology and Environmentology (Waseda University)
  
  Volume: B11 Pages: 167-169
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PLANNED-23115007
[Journal Article] Log-Weibull law in Fermi-Pasta-Ulam oscillator chain: Induction time as Nekhoroshev stability time2015
- Author(s)
  Yuji Tamiya, Soya Shinkai, Yoji Aizawa
- Journal Title
  
  Advances in Science, Technology and Environmentology (Waseda University)
  
  Volume: B11 Pages: 181-183
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PLANNED-23115007
[Journal Article] Distributional behavior of time averages of non-L1 observables in one-dimensional intermittent maps with infinite invariant measures2015
- Author(s)
  Takuma Akimoto, Soya Shinkai, Yoji Aizawa
- Journal Title
  
  Journal of Statistical Physics
  
  Volume: 158 Issue: 2 Pages: 476-493
- DOI
  10.1007/s10955-014-1138-0
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-23115007, KAKENHI-PROJECT-26800204
[Journal Article] Energetics of Single Active Diffusion Trajectories2014
- Author(s)
  Soya Shinkai, Yuichi Togashi
- Journal Title
  
  Europhysics Letters
  
  Volume: 105 Issue: 3 Pages: 30002-30002
- DOI
  10.1209/0295-5075/105/30002
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-23115007
[Journal Article] 1/f Spectrum and 1-stable Law in One-Dimensional Intermittent Map with Uniform Invariant Measure and Nekhoroshev Stability2012
- Author(s)
  Soya Shinkai, Yoji Aizawa
- Journal Title
  
  Journal of the Physical Society of Japan
  
  Volume: 81
- NAID
  40019151315
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21540399
[Journal Article] 1/f Spectrum and 1-Stable Law in One-Dimensional Intermittent Map with Uniform Invariant Measure and Nekhoroshev Stability2012
- Author(s)
  S. Shinkai and Y. Aizawa
- Journal Title
  
  J. Phys. Soc. Japan
  
  Volume: 81 Pages: 24009-24009
- NAID
  40019151315
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Polymer physics of Hi-C data reveals linear viscoelasticity of the 3D genome2024
- Author(s)
  Soya Shinkai
- Organizer
  RIKEN Symposium on Nuclear Structure and Function
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] Theory of viscoelasticity of chromatin and its surrounding environment2024
- Author(s)
  Soya Shinkai
- Organizer
  RIKEN BDR Symposium 2024「Time Across Scales: Development, Homeostasis and Aging」
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] 高分子内の1輝点ダイナミクスを記述する方程式と3次元ゲノム自身の線形粘弾性2024
- Author(s)
  新海創也
- Organizer
  第41回染色体ワークショップ・第22回核ダイナミクス研究会
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] DNA情報の形と動きI & II2024
- Author(s)
  新海創也
- Organizer
  第1回情報物理数理セミナー
- Invited
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] Polymer physics of Hi-C data reveals linear viscoelasticity of the 3D genome2023
- Author(s)
  新海創也
- Organizer
  研究会「理論と実験」２０２３
- Invited
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] Polymer physics of Hi-C data reveals linear viscoelasticity of the 3D genome2023
- Author(s)
  Soya Shinkai
- Organizer
  The 61st Annual Meeting of the Biophysical Society of Japan
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] クロマチンと周囲環境の粘弾性理論2023
- Author(s)
  新海創也
- Organizer
  2023年度NIG-JOINT研究会第2回ゲノムモデリング研究会
- Invited
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] 単一分子局在顕微鏡法データの定量解析手法あれこれ2023
- Author(s)
  新海創也
- Organizer
  第14回光塾
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] Polymer physics of Hi-C data reveals linear viscoelasticity of the 3D genome2023
- Author(s)
  Soya Shinkai
- Organizer
  The 4th Genome Modality Annual meeting
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] ３次元ゲノム構造とクロマチン動態をつなぐ高分子物理学2023
- Author(s)
  新海創也
- Organizer
  第97回日本薬理学会年会
- Invited
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] Polymer physics of Hi-C data2023
- Author(s)
  新海創也
- Organizer
  第3回 Hi-C研究会
- Invited
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] Polymer physics of Hi-C data reveals linear viscoelasticity of the 3D genome2023
- Author(s)
  Soya Shinkai
- Organizer
  The Structural Genome: Merging Physics, Biology & Computation
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] Polymer physics for Hi-C data reveals rheological features of chromatin2023
- Author(s)
  Soya Shinkai
- Organizer
  Genome building from TADs
- Invited
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] Polymer physics of Hi-C data reveals linear viscoelasticity of the 3D genome2023
- Author(s)
  新海創也
- Organizer
  2023年度非平衡・多階層・複雑系研究会
- Invited
- Data Source
  KAKENHI-PUBLICLY-23H04297
[Presentation] Polymer physics for Hi-C data reveals dynamic viscoelastic features of chromatin controlled by SMC proteins2022
- Author(s)
  Soya Shinkai
- Organizer
  Genome organisation by SMC complexes
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] Polymer physics for Hi-C data reveals rheological features of chromatin2022
- Author(s)
  Soya SHinkai
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] 3D genome organization driven by hydrodynamic interactions2022
- Author(s)
  新海創也
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] 細胞核内の動的で階層的なゲノム2022
- Author(s)
  新海創也
- Organizer
  非平衡・多階層・複雑系研究会
- Invited
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] Dynamic 3D genome organization in hydrodynamic interactions2022
- Author(s)
  Soya Shinkai
- Organizer
  Understanding physical properties of the genome
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] 流体力学的相互作用下でのゲノム組織化原理2022
- Author(s)
  新海創也
- Organizer
  ゲノムモデリング研究会
- Invited
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] 流体力学的相互作用下の動的3次元ゲノム組織化2021
- Author(s)
  新海創也
- Organizer
  第39回染色体ワークショップ・第20回核ダイナミクス研究会
- Data Source
  KAKENHI-PUBLICLY-21H05763
[Presentation] 流体力学的相互作用下の動的3次元ゲノム組織化2021
- Author(s)
  新海創也
- Organizer
  第39回染色体ワークショップ・第20回核ダイナミクス研究会
- Data Source
  KAKENHI-PUBLICLY-20H05550
[Presentation] Toward understanding the dynamic state of 3D genome by polymer modeling of Hi-C data2020
- Author(s)
  Soya Shinkai, Ryuichiro Nakato, Shuichi Onami
- Organizer
  Cell Bio Virtual 2020
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H05550
[Presentation] Toward a physical understanding of the dynamic 3D genome organization2020
- Author(s)
  Soya Shinkai, Shuichi Onami, Ryuichiro Nakato
- Organizer
  The 58th Annual Meeting of the Biophysical Society of Japan
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H05550
[Presentation] Deciphering chromatin dynamics and structure by polymer modeling2019
- Author(s)
  Soya Shinkai
- Organizer
  International Congress on Industrial and Applied Mathematics (ICIAM2019)
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] スケーリングを中心としたゲノム構造・動態の時空間階層性2019
- Author(s)
  新海創也
- Organizer
  第42回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Microrheology for Hi-C data reveals the spectrum of the dynamic 3D genome organization2019
- Author(s)
  Soya Shinkai
- Organizer
  Chromosome Dynamics 2019
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Microrheology for Hi-C Data Reveals the Spectrum of the Dynamic 3D Genome Organization2019
- Author(s)
  新海創也
- Organizer
  理論と実験２０１９
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Mathematical modeling of chromatin and chromosome dynamics2019
- Author(s)
  Soya Shinkai
- Organizer
  The 78th Annual Meetings of the Japanese Cancer Association
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Deciphering Hi-C Data into Polymer Dynamics2019
- Author(s)
  Soya Shinkai
- Organizer
  Multiscale Modeling of Chromatin: Bridging Experiment with Theory
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] ゲノム構造データから読み解く階層的でダイナミックなゲノムレオロジー特性2019
- Author(s)
  新海創也
- Organizer
  第十一回光塾
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] ゲノム構造データから読み解く階層的でダイナミックなゲノムレオロジー特性2019
- Author(s)
  新海創也
- Organizer
  クロマチン・細胞核の形成とダイナミクスによるゲノム制御
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] 高分子モデリングによるHi-Cデータ解読2019
- Author(s)
  新海創也
- Organizer
  第36回染色体ワークショップ・第17回核ダイナミクス研究会
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Microrheology for Hi-C data reveals the spectrum of the dynamic 3D genome organization2019
- Author(s)
  Soya Shinkai
- Organizer
  第42回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Deciphering genome organization and dynamics by mathematical modeling and simulation2019
- Author(s)
  Soya Shinkai
- Organizer
  The 57th Annual Meetings of The Biophysical Society of Japan
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Microrheology for Hi-C data reveals the spectrum of the dynamic 3D genome organization2019
- Author(s)
  新海創也
- Organizer
  第37回染色体ワークショップ・第18回核ダイナミクス研究会
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Deciphering Hi-C data into polymer dynamics2019
- Author(s)
  Soya Shinkai
- Organizer
  The 8th Meeting on GRANT-IN-AID FOR SCIENTIFIC RESEARCH ON INNOVATIVE AREAS “CHROMOSOME ORCHESTRATION SYSTEM (CHROMOSOME OS)”
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] PHi-C: Hi-Cデータから4Dゲノムシミュレーションへ2018
- Author(s)
  新海創也
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] PHi-C: deciphering Hi-C data into polymer dynamics2018
- Author(s)
  新海創也
- Organizer
  第91回日本生化学会大会
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Deciphering Hi-C data into polymer dynamics2018
- Author(s)
  新海創也
- Organizer
  研究会「理論と実験」２０１８
- Invited
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] Mathematical modeling of chromatin dynamics and 3D organization2018
- Author(s)
  Soya Shinkai
- Organizer
  THE 3 RD HIROSHIMA INTERNATIONAL SYMPOSIUM ON FUTURE SCIENCE “FRONTIERS IN BIOIMAGING BASED LIFE SCIENCE”
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] PHi-C: deciphering Hi-C data into polymer dynamics2018
- Author(s)
  Soya Shinkai
- Organizer
  Principles of Chromosome Structure and Function
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-18H04720
[Presentation] クロマチン動態と構造をつなぐ数理2017
- Author(s)
  新海創也
- Organizer
  生命動態の分子メカニズムと数理
- Place of Presentation
  理研QBiC（大阪府）
- Year and Date
  2017-03-17
- Invited
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] ヌクレオソーム動態に反映されたクロマチンドメイン構造:数理モデル、動態解析、Hi-C データ活用の試み2017
- Author(s)
  新海創也
- Organizer
  細胞核機能の発現と制御
- Invited
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] Bridging the dynamics and organization of chromatin domains by mathematical modeling2017
- Author(s)
  Soya Shinkai
- Organizer
  SMC 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] 染色体近接確率マップの高分子物理学2017
- Author(s)
  新海創也
- Organizer
  染色体OS研究会議
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] Bridging the dynamics and organization of chromatin domains by mathematical modeling2017
- Author(s)
  Soya Shinkai
- Organizer
  5th International Symposium of the Mathematics on Chromatin Live Dynamics
- Place of Presentation
  東広島
- Year and Date
  2017-03-07
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] Bridging the gap between the dynamics and organization of chro- matin domains by mathematical modeling2017
- Author(s)
  新海創也
- Organizer
  第55回日本生物物理学会
- Invited
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] Bridging the gap between th dynamics and organization of chromatin domains by mathematical modeling2017
- Author(s)
  Soya Shinkai
- Organizer
  Taiwan-Japan Joint Meeting on Bioimaging for Young researchers -Resonance Bio - Academia Sinica - 4D Cell -
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] サブマイクロスケールのクロマチンドメインは核内でどれくらい動いているのか ? ―数理モデルとシミュレーションからの示唆―2017
- Author(s)
  新海創也
- Organizer
  第34回染色体ワークショップ・第15回核ダイナミクス研究会
- Place of Presentation
  かずさアカデミアホール（千葉県）
- Year and Date
  2017-01-11
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] Bridging the dynamics and organization of chromatin domains by mathematical modeling2017
- Author(s)
  新海創也
- Organizer
  5th International Symposium of the Mathematics on Chromatin Live Dynamics
- Place of Presentation
  東広島
- Year and Date
  2017-03-07
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] クロマチン動態と構造をつなぐ数理2017
- Author(s)
  新海創也
- Organizer
  生命動態の分子メカニズムと数理
- Place of Presentation
  理研QBiC（大阪府）
- Year and Date
  2017-03-17
- Invited
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] クロマチン動態数理モデリングからHi-Cデータに基づいた染色体動態シミュレーションへの展開2017
- Author(s)
  新海創也
- Organizer
  ConBio2017
- Invited
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] 数理で解き明かすクロマチン動態と構造の関係2017
- Author(s)
  新海創也
- Organizer
  理研公開シンポジウム「観る・測る・解く」 4 次元細胞計測の現状と未来
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] コンタクト確率の高分子物理学2017
- Author(s)
  新海創也
- Organizer
  第35回染色体ワークショップ・第16回核ダイナミクス研究会
- Data Source
  KAKENHI-PUBLICLY-16H01408
[Presentation] 核内クロマチン動態とクロマチンドメイン構造をつなぐモデルのデザインと実験との融合2016
- Author(s)
  新海創也, 野崎慎, 前島一博, 冨樫祐一
- Organizer
  CREST「生命動態の理解と制御のための基盤技術の創出」研究領域第6回数理デザイン道場
- Place of Presentation
  三島
- Year and Date
  2016-06-13
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] 細胞内温度を記述する術を我々は手にしているか？2016
- Author(s)
  新海創也
- Organizer
  第1 回Biothermology Workshop
- Place of Presentation
  基礎生物学研究所（岡崎市）
- Year and Date
  2016-12-10
- Invited
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] “少数性生物学的”細胞内拡散現象の理論―アクティブ拡散とヌクレオソーム拡散を例に―2016
- Author(s)
  新海創也, 冨樫祐一
- Organizer
  新学術領域「少数性生物学」研究成果報告会
- Place of Presentation
  東京大学伊藤謝恩ホール（東京都文京区）
- Year and Date
  2016-03-15
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Dynamic nucleosome movement provides structural information of topological chromatin domains in living human cells2016
- Author(s)
  Soya Shinkai, Tadasu Nozaki, Kazuhiro Maeshima, Yuichi Togashi
- Organizer
  2016 Workshop on DNA Reactions and DNA/Chromosome Dynamics
- Place of Presentation
  Marine Biological Laboratory, USA
- Year and Date
  2016-09-11
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] 少数分子反応系の理論～化学・力学複合ネットワークの理論へ2016
- Author(s)
  中川正基, Holger Flechsig, 新海創也, 冨樫祐一
- Organizer
  新学術領域「少数性生物学」研究成果報告会
- Place of Presentation
  東京大学伊藤謝恩ホール（東京都文京区）
- Year and Date
  2016-03-15
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] クロマチンドメイン構造と一分子ヌクレオソーム動態の関係2016
- Author(s)
  新海創也, 野崎慎, 前島一博, 冨樫祐一
- Organizer
  第33回染色体ワークショップ・第14回核ダイナミクス研究会
- Place of Presentation
  松島一の坊（宮城県宮城郡松島町）
- Year and Date
  2016-01-12
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Dynamic nucleosome movement provides structural information of topological chromatin domains in living human cells2016
- Author(s)
  Soya Shinkai, Tadasu Nozaki, Kazuhiro Maeshima, Yuichi Togashi
- Organizer
  The 2nd Hiroshima International Symposium on Future Science
- Place of Presentation
  広島大学理学部（広島県東広島市）
- Year and Date
  2016-03-17
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 染色体の動的階層性2016
- Author(s)
  新海創也
- Organizer
  細胞システムの動態と論理VIII
- Place of Presentation
  理化学研究所（和光市）
- Year and Date
  2016-04-14
- Invited
- Data Source
  KAKENHI-PROJECT-16K14655
[Presentation] クロマチン動態データから抽出されるクロマチンドメイン構造情報2016
- Author(s)
  新海創也, 野崎慎, 前島一博, 冨樫祐一
- Organizer
  生命動態システム科学四拠点・CREST・PRESTO・QBiC合同シンポジウム「生命動態の分子メカニズムと数理」
- Place of Presentation
  シェラトンホテル広島（広島県広島市）
- Year and Date
  2016-03-26
- Invited
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Dynamics nucleosome movement provides structural information of topological chromatin domains in human cells2015
- Author(s)
  Soya Shinkai, Tadasu Nozaki, Kazuhiro Maeshima, Yuichi Togashi
- Organizer
  4th International Symposium of the Mathematics on Chromatin Live Dynamics
- Place of Presentation
  JMSアステールプラザ（広島県広島市）
- Year and Date
  2015-12-07
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 少数分子反応ネットワーク理論の構築 (7)2015
- Author(s)
  冨樫祐一, 小松崎民樹, 李振風, 寺本央, 新海創也, Holger Flechsig, James Nick Taylor, 中川正基
- Organizer
  新学術領域「少数性生物学」第9回領域会議
- Place of Presentation
  万国津梁館（沖縄県名護市）
- Year and Date
  2015-06-06
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] ゆらぐ世界における分子やクロマチン動態の記述の仕方2015
- Author(s)
  新海創也
- Organizer
  第七回「光塾」
- Place of Presentation
  広島大学東広島キャンパス（広島県東広島市）
- Year and Date
  2015-09-05
- Invited
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] クロマチンドメイン構造と一分子ヌクレオソーム動態の関係2015
- Author(s)
  新海創也
- Organizer
  数学協働プログラムワークショップ「生命ダイナミクスの数理とその応用：理論からのさらなる深化」
- Place of Presentation
  東京大学大学院数理科学研究科（東京都目黒区）
- Year and Date
  2015-12-11
- Invited
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] ヌクレオソームゆらぎが示すtopologically associating domainのフラクタル次元と大きさ2015
- Author(s)
  新海創也, 野崎慎, 前島一博, 冨樫祐一
- Organizer
  新学術領域「少数性生物学」第9回領域会議
- Place of Presentation
  万国津梁館（沖縄県名護市）
- Year and Date
  2015-06-06
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Analytical theory of individual diffusion trajectories in living cells2015
- Author(s)
  Soya Shinkai, Yuichi Togashi
- Organizer
  The 2015 International Chemical Congress of Pacific Basin Societies, Symposium #137 Life at Small Copy Numbers
- Place of Presentation
  Hawaii Convention Center (Honolulu, HI, USA)
- Year and Date
  2015-12-19
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 一分子ヌクレオソーム動態が示すクロマチンドメインの構造情報2015
- Author(s)
  新海創也, 野崎慎, 前島一博, 冨樫祐一
- Organizer
  研究会「理論と実験」2015
- Place of Presentation
  広島大学理学部（広島県東広島市）
- Year and Date
  2015-10-08
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 一分子ヌクレオソーム動態が示すクロマチンドメインの構造情報2015
- Author(s)
  新海創也, 野崎慎, 前島一博, 冨樫祐一
- Organizer
  第七回「光塾」
- Place of Presentation
  広島大学東広島キャンパス（広島県東広島市）
- Year and Date
  2015-09-05
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Quantitative theory of active diffusion trajectories by instantaneous diffusion coefficient2015
- Author(s)
  Soya Shinkai, Yuichi Togashi
- Organizer
  Biophysical Society 59th Annual Meeting
- Place of Presentation
  Baltimore Convention Center (USA)
- Year and Date
  2015-02-10
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] ハミルトン系カオスのlog-Weibull則とNekhoroshevの定理2014
- Author(s)
  田宮裕治, 新海創也, 相澤洋二
- Organizer
  日本物理学会第69回年次大会
- Place of Presentation
  東海大学湘南キャンパス
- Year and Date
  2014-03-28
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Instantaneous diffusion coefficient derived from energetics of single active diffusion trajectories2014
- Author(s)
  Soya Shinkai
- Organizer
  2nd International Symposium of the Mathematics on Chromatin Live Dynamics
- Place of Presentation
  広島大学広仁会館
- Year and Date
  2014-03-11
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Diffusion analysis theory of individual trajectories2014
- Author(s)
  Soya Shinkai
- Organizer
  New Challenges in Complex Systems Science (Waseda AICS Symposium and the 14th Slovenia-Japan Seminar)
- Place of Presentation
  早稲田大学西早稲田キャンパス（東京都）
- Year and Date
  2014-10-25
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 核内拡散現象からクロマチン構造やエネルギー散逸を定量化する理論の構築2014
- Author(s)
  新海創也
- Organizer
  数学協働プログラム「生命ダイナミックスの数理とその応用」
- Place of Presentation
  東京大学数理科学研究科
- Year and Date
  2014-01-21
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 非一様粘性環境下での拡散軌道から見積もるエネルギー散逸の分解2014
- Author(s)
  新海創也
- Organizer
  日本物理学会2014年秋季大会
- Place of Presentation
  中部大学春日井キャンパス（愛知県）
- Year and Date
  2014-09-10
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Chromatin fluctuations controlled by chromatin structure2014
- Author(s)
  Soya Shinkai
- Organizer
  The 4D Nucleome 2014
- Place of Presentation
  安芸グランドホテル（広島県）
- Year and Date
  2014-12-18
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Diffusion analysis theory for an individual trajectory2014
- Author(s)
  新海創也, 冨樫祐一
- Organizer
  新学術領域「少数性生物学」第7回領域会議
- Place of Presentation
  びわこクラブ（滋賀県）
- Year and Date
  2014-06-21
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] クロマチン構造に由来するクロマチン動態制御2014
- Author(s)
  新海創也
- Organizer
  第32回染色体ワークショップ・第13回核ダイナミクス研究会
- Place of Presentation
  安芸グランドホテル（広島県）
- Year and Date
  2014-12-16
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] エンハンスされた拡散時系列のエネルギー論2013
- Author(s)
  新海創也、冨樫祐一
- Organizer
  日本物理学会第68回年次大会
- Place of Presentation
  広島大学東広島キャンパス（広島県東広島市）
- Year and Date
  2013-03-26
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 異常拡散の出現機構の新たな提案とその動的解析2013
- Author(s)
  新海創也, 冨樫祐一
- Organizer
  日本物理学会2013年秋季大会
- Place of Presentation
  徳島大学常三島キャンパス
- Year and Date
  2013-09-28
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] クロマチンダイナミクスとエルゴード性2013
- Author(s)
  新海創也
- Organizer
  力学系・カオス・複雑系のエルゴード論
- Place of Presentation
  早稲田大学
- Year and Date
  2013-08-29
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 細胞内の非熱ゆらぎとエネルギー論的拡散係数2013
- Author(s)
  新海創也
- Organizer
  非線形・非平衡シンポジウム -新しいエルゴード問題の探求-
- Place of Presentation
  早稲田大学大学院先進理工学研究科（東京都新宿区）
- Year and Date
  2013-03-07
- Invited
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 少数分子反応ネットワーク理論の構築 (3)少数性を知るための解析・モデリング2013
- Author(s)
  冨樫祐一, 小松崎民樹, 李振風, 寺本央, 新海創也
- Organizer
  新学術領域研究「少数性生物学」第5回領域会議
- Place of Presentation
  びわこクラブ
- Year and Date
  2013-06-15
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] エネルギー論的にwell-definedな瞬間拡散係数とその核内ダイナミクスへの応用に向けて2013
- Author(s)
  新海創也
- Organizer
  研究会「理論と実験」2013
- Place of Presentation
  広島大学理学部
- Year and Date
  2013-10-11
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Anomalous diffusion driven by infinite ergodic systems2012
- Author(s)
  S. Shinkai
- Organizer
  DYNAMICS OF COMPLEX SYSTEMS 2012
- Place of Presentation
  Hokkaido University(Sapporo)
- Year and Date
  2012-03-08
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] 非定常写像力学系における無限エルゴード性に由来する異常拡散2012
- Author(s)
  杉山功敏, 新海創也, 相澤洋二
- Organizer
  日本物理学会第67但1年次大会
- Place of Presentation
  関西学院大学
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Anomalous diffusion driven by infinite ergodic systems2012
- Author(s)
  Soya Shinkai
- Organizer
  DYNAMICS OF COMPLEX SYSTEMS 2012
- Place of Presentation
  Hokkaido University (Sapporo)(招待講演)
- Year and Date
  2012-03-08
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] 細胞内ゆらぎのアクティビティ指標としての局所拡散係数2012
- Author(s)
  新海創也
- Organizer
  神戸大学大学院システム情報学研究科第３回協定講座シンポジウム「計算科学のインフラストラクチャとアプリケーション」
- Place of Presentation
  神戸大学統合研究拠点（兵庫県神戸市）
- Year and Date
  2012-11-29
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 非定常写像力学系における無限エルゴード性に由来する異常拡散2012
- Author(s)
  杉山功敏, 新海創也, 相澤洋二
- Organizer
  日本物理学会第67回年次大会
- Place of Presentation
  関西学院大学(兵庫県)
- Year and Date
  2012-03-27
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Some examples of 2-dimensional area-preserving infinite ergodic systems2011
- Author(s)
  Soya Shinkai
- Organizer
  Weak Chaos, Infinite Ergodic Theory, and Anomalous Dynamics
- Place of Presentation
  Dresden (Germany)(招待講演)
- Year and Date
  2011-08-02
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] One-stable law in area-preserving intermittent map2011
- Author(s)
  新海創也
- Organizer
  研究集会Dynamics of complex systems 2011
- Place of Presentation
  北海道大学
- Year and Date
  2011-03-07
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Some examples of 2-dimensional area-preserving infinite ergodic systems2011
- Author(s)
  S. Shinkai
- Organizer
  Weak Chaos, Infinite Ergodic Theory, and Anomalous Dynamics
- Place of Presentation
  Max-Planck-Institute(Germany)
- Year and Date
  2011-08-02
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] 力学的不安定性を統一的に特徴付ける一般化された Lyapunov 指数2010
- Author(s)
  秋元琢磨, 中川正基, 新海創也, 相澤洋二
- Organizer
  日本物理学会
- Place of Presentation
  岡山大学
- Year and Date
  2010-03-21
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] 定常・非定常カオスカ学系における相関関数と統計則2010
- Author(s)
  添石喬裕, 新海創也, 相澤洋二
- Organizer
  日本物理学会
- Place of Presentation
  岡山大学
- Year and Date
  2010-03-21
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Stable laws for one-dimensional intermittent maps equipped with a uniform invariant measure2010
- Author(s)
  S.Shinkai, Y.Aizawa
- Organizer
  Dynamic Days Asia Pacific 6
- Place of Presentation
  Australia
- Year and Date
  2010-07-12
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Slow dynamics in generic Hamiltonian systems2010
- Author(s)
  S.Shinkai, Y.Aizawa
- Organizer
  The 13th Slovenia-Japan seminar on nonlinear science
- Place of Presentation
  Waseda University, Japan
- Year and Date
  2010-11-04
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Generalized Lyapunov exponent toward a unified view of dynamical instabilities2009
- Author(s)
  秋元琢磨, 中川正基, 新海創也, 相澤洋二
- Organizer
  Dynamics Days Europe
- Place of Presentation
  Gottingen(Germany)
- Year and Date
  2009-09-01
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] Infnite ergodic theoretical aspects for one-dimensionalmaps with an indifferent fixed point and a uniform measure2009
- Author(s)
  新海創也, 相澤洋二
- Organizer
  Dynamics Days Europe
- Place of Presentation
  Gottingen(Germany)
- Year and Date
  2009-09-03
- Data Source
  KAKENHI-PROJECT-21540399
[Presentation] 疎密クロマチン構造に由来するクロマチン自身の動態制御
- Author(s)
  新海創也
- Organizer
  生命動態システム科学四拠点・CREST・PRESTO合同シンポジウム「生命動態の分子メカニズムと数理」
- Place of Presentation
  京都大学芝蘭会館（京都府）
- Year and Date
  2015-03-16 – 2015-03-17
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 少数分子反応ネットワーク理論の構築 (6)
- Author(s)
  冨樫祐一, 小松崎民樹, 李振風, 寺本央, 新海創也, James Nick Taylor, Holger Flechsig
- Organizer
  新学術領域「少数性生物学」第8回領域会議・さきがけ「細胞機能の構成的な理解と制御」第6回領域会議・合同シンポジウム
- Place of Presentation
  ルスツリゾート（北海道）
- Year and Date
  2015-01-30 – 2015-02-02
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 個別のアクティブ拡散時系列のエネルギー論―平均二乗変位解析を越えた地平―
- Author(s)
  新海創也, 冨樫祐一
- Organizer
  新学術領域研究「少数性生物学」第6回領域会議
- Place of Presentation
  ヒルトンニセコビレッジ
- Year and Date
  2014-02-21 – 2014-02-22
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 個別のアクティブ拡散時系列のエネルギー論―MSD解析を越えた地平―
- Author(s)
  新海創也
- Organizer
  非線形・非平衡系シンポジウム
- Place of Presentation
  早稲田大学
- Year and Date
  2014-03-13 – 2014-03-14
- Invited
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 瞬間拡散係数を用いた核内クロマチンダイナミクスの解析理論
- Author(s)
  新海創也
- Organizer
  定量生物学の会第6回年会
- Place of Presentation
  大阪大学銀杏会館
- Year and Date
  2013-11-23 – 2013-11-24
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 少数分子反応ネットワーク理論の構築 (4)
- Author(s)
  冨樫祐一, 小松崎民樹, 李振風, 寺本央, 新海創也
- Organizer
  新学術領域研究「少数性生物学」第6回領域会議
- Place of Presentation
  ヒルトンニセコビレッジ
- Year and Date
  2014-02-21 – 2014-02-22
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 細胞内拡散現象における瞬間拡散係数の解析例と非平衡定常系における意味
- Author(s)
  新海創也, 山岸雅彦, 矢島潤一郎, 冨樫祐一
- Organizer
  新学術領域「少数性生物学」第8回領域会議・さきがけ「細胞機能の構成的な理解と制御」合同シンポジウム
- Place of Presentation
  ルスツリゾート（北海道）
- Year and Date
  2015-01-30 – 2015-02-01
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] 少数分子反応ネットワーク理論の構築 (5)
- Author(s)
  冨樫祐一, 小松崎民樹, 李振風, 寺本央, 新海創也, James Nick Taylor, Holger Flechsig
- Organizer
  新学術領域「少数性生物学」第7回領域会議
- Place of Presentation
  びわこクラブ（滋賀県）
- Year and Date
  2014-06-21 – 2014-06-22
- Data Source
  KAKENHI-PLANNED-23115007
[Presentation] Diffusion analysis theory of individual trajectories
- Author(s)
  新海創也
- Organizer
  研究会「理論と実験」2014
- Place of Presentation
  広島大学理学部（広島県）
- Year and Date
  2014-10-09 – 2014-10-10
- Data Source
  KAKENHI-PLANNED-23115007

1. OCHIAI Hiroshi (60640753)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
2. AIZAWA Yoji (70088855)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. TOGASHI Yuichi (50456919)

# of Collaborated Projects: 1 results

# of Collaborated Products: 22 results
4. KOMATSUZAKI Tamiki (30270549)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
5. LI Chun-Biu (90397795)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
6. TERAMOTO Hiroshi (90463728)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
7. OKABE Kohki (20455398)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. FLECHSIG Holger (00758964)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
9. 菅原武志 (60713005)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
10. 野澤竜介 (70868710)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
11. TSUGAWA Satoru

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. NAKAGAWA Masaki

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
13. TAKEDA Shunsuke

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. TAYLOR James N.

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
15. NAKATO Ryuichiro

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
16. 相沢洋二

# of Collaborated Projects: 0 results

# of Collaborated Products: 10 results
17. 大石裕晃

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
18. 岡本和子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
19. 上野勝

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Shinkai Soya 新海 創也

SHINKAI Soya 新海 創也

Research Projects

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Modality of chromatin viscoelasticity and loop formation based on Hi-C dataPrincipal Investigator

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クロマチンの運動性から捉える転写制御のゆらぎとがん細胞の悪性化

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Elucidation of the correlation between higher-order genome structure dynamics and gene expression

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Modality of 3D genome organization in hydrodynamic interactionsPrincipal Investigator

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Genome information physics based on microrheology of the 3D genome organizationPrincipal Investigator

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Polymer modeling for 3D chromosome structure with a deep learning and 4D simulationPrincipal Investigator

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Interactions within chromatin domains by a mathematical model of chromosomes with epigenetic informationPrincipal Investigator

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Simultaneous imaging of chromatin fractal dimensions and temperature in living cell nucleusPrincipal Investigator

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Constructing a theoretical framework to study reaction networks involving a small number of molecules: modeling with consideration of minority and hierarchy

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Multi ergodicity in nearly integrable Hamiltonian systems and large deviation properties of infinite ergodic systems

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[Journal Article] Transcription-coupled changes in higher-order genomic structure and transcription hub viscosity prolong enhancer-promoter connectivity2023

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[Journal Article] Single‐molecule tracking of Nanog and Oct4 in living mouse embryonic stem cells uncovers a feedback mechanism of pluripotency maintenance2023

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[Journal Article] Centromere/kinetochore is assembled through CENP-C oligomerization2023

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Shinkai Soya 新海創也

SHINKAI Soya 新海創也