KAWASHIMA YUSUKE 川島祐介

… Alternative Names

Kawashima Yusuke 川島祐介

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Researcher Number	30588124
Other IDs
Affiliation (Current)	2023: 公益財団法人かずさDNA研究所, ゲノム事業推進部, ユニット長
Affiliation (based on the past Project Information) *help	2021 – 2023: 公益財団法人かずさDNA研究所, ゲノム事業推進部, ユニット長 2018 – 2020: 公益財団法人かずさDNA研究所, ゲノム事業推進部, 研究員 2017: 国立研究開発法人理化学研究所, 統合生命医科学研究センター, 研究員
Review Section/Research Field	Principal Investigator Basic Section 43050:Genome biology-related / Genome biology / Analytical chemistry Except Principal Investigator Medium-sized Section 52:General internal medicine and related fields / Basic Section 55010:General surgery and pediatric surgery-related / Basic Section 53050:Dermatology-related / Basic Section 52050:Embryonic medicine and pediatrics-related / Medium-sized Section 37:Biomolecular chemistry and related fields / Basic Section 43050:Genome biology-related / Basic Section 48010:Anatomy-related / Basic Section 37030:Chemical biology-related / Medium-sized Section 49:Pathology, infection/immunology, and related fields
Keywords	Principal Investigator プロテオミクス / LC-MS / プロテオーム / プロテオーム解析 / 炎症 / バイオマーカー / 血清 Except Principal Investigator プロテオーム解析 / 質量分析 / プロテオーム … More / プロテオミクス / メタトランスクリプトーム解析 / メタゲノム解析 / 腸内細菌トランスオミクス解析 / 増殖因子 / 生分解性鋳型 / biotube / 生体内組織形成術 / 食道再生 / 腫瘍マーカー / メラノーマ / 悪性黒色腫 / 炭酸ナトリウム沈殿 / LC-MS / 新生児スクリーニング / 乾燥ろ紙血 / ゲル電気泳動 / エクソソーム / プロテオフォーム / トップダウンプロテオミクス / Epstein-Barrウイルス / クロマチン構造 / 疾患シグナル / タンパク質病態 / 疾患プロテオミクス / 筋萎縮性側索硬化症(ALS) / MSイメージング / メタロミクス / ALS / 死後脳 / 神経変性疾患 / 細菌メタゲノム解析 / 壊死性腸炎 / 小児外科 / 新生児 / 尿 / 急性虫垂炎 / 腸内細菌叢 / 胎便 / 早期診断バイオマーカー / 胆道閉鎖症 / 便 / Host-microbe interaction / MALDI-TOFMS / HaloTag-NAPPA / multiplex assay / 蛋白ネットワーク解析 / クリックケミストリー / 複合体一斉解析 / バーコード化蛋白 / 合成型蛋白アレイ / 蛋白質-蛋白質相互作用 / Proteome / Interactome / 複合体相互作用 / インタラクトーム / トランスクリプトーム解析 / エクソーム解析 / オミックス解析 / NEMO / トランスクリプトーム / 全エクソーム解析 / 未診断 / targeted RNA sequence / STAT1 / 未診断症例 / 原発性免疫不全症 / ターゲットRNAシーケンス / マルチオミックス解析 Less

Development of a whole proteome analysis system in cellPrincipal Investigator
- Principal Investigator
  
  川島祐介
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  Kazusa DNA Research Institute
高深度プロテオーム解析による悪性黒色腫血中腫瘍マーカーの探索と臨床応用
- Principal Investigator
  
  梅村啓史
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 53050:Dermatology-related
- Research Institution
  Nihon University
増殖因子の徐放化と生分解性鋳型を用いた同所性生体内組織形成術による一期的食道再生
- Principal Investigator
  
  鈴木啓介
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 55010:General surgery and pediatric surgery-related
- Research Institution
  Saitama Medical University
The translational research for pediatric diseases based on gut bacterial transomics analysis
- Principal Investigator
  
  藤代準
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Challenging Research (Pioneering)
- Review Section
  
  Medium-sized Section 52:General internal medicine and related fields
- Research Institution
  The University of Tokyo
癌ウイルスによるクロマチン構造破綻が誘導する新規発癌機構の解明
- Principal Investigator
  
  岡部篤史
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  Chiba University
Development of In-Depth Top-Down Proteomics Method for Comprehensive Analysis of Human Proteoforms
- Principal Investigator
  
  武森信暁
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Fund for the Promotion of Joint International Research (Fostering Joint International Research (B))
- Review Section
  
  Medium-sized Section 37:Biomolecular chemistry and related fields
- Research Institution
  Ehime University
Development of detection method for multiple disease-causative proteins using dried blood spots
- Principal Investigator
  
  中島大輔
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 52050:Embryonic medicine and pediatrics-related
- Research Institution
  Kazusa DNA Research Institute
便プロテオーム解析を用いた小児外科疾患のトランスレーショナルリサーチ
- Principal Investigator
  
  藤代準
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Challenging Research (Pioneering)
- Review Section
  
  Medium-sized Section 52:General internal medicine and related fields
- Research Institution
  The University of Tokyo
筋萎縮性側索硬化症ALS死後脳における多量体形成分子群の神経変性病態構造の解明
- Principal Investigator
  
  小川覚之
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 48010:Anatomy-related
- Research Institution
  Dokkyo Medical University
  The University of Tokyo
Exploring the molecular biological basis of host-microbe interactions through many-to-many interactome technology.
- Principal Investigator
  
  Yazaki Junshi
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 37030:Chemical biology-related
- Research Institution
  Institute of Physical and Chemical Research
Multi-OMICS approaches to investigate molecular pathogenesis of primary immune deficiency
- Principal Investigator
  
  OKADA SATOSHI
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Fund for the Promotion of Joint International Research (Fostering Joint International Research (B))
- Review Section
  
  Medium-sized Section 49:Pathology, infection/immunology, and related fields
- Research Institution
  Hiroshima University
Development of analysis method of inflammation-related proteins in serum using inflammatory cytokine receptorsPrincipal Investigator
- Principal Investigator
  
  Kawashima Yusuke
- Project Period (FY)
  2017 – 2018
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Analytical chemistry
  Genome biology
- Research Institution
  Kazusa DNA Research Institute
  Institute of Physical and Chemical Research

All 2022 2021 2020 2019 2018 2017

All Journal Article Presentation Patent

[Journal Article] Data-Independent Acquisition Mass Spectrometry-Based Deep Proteome Analysis for Hydrophobic Proteins from Dried Blood Spots Enriched by Sodium Carbonate Precipitation2022
- Author(s)
  Daisuke Nakajima, Osamu Ohara, Yusuke Kawashima
- Journal Title
  
  Methods in Molecular Biology
  
  Volume: 2420 Pages: 39-52
- DOI
  10.1007/978-1-0716-1936-0_4
- ISBN
  9781071619353, 9781071619360
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21K07877
[Journal Article] 胆道閉鎖症の便蛋白/MS解析とバイオマーカーとしての意義2021
- Author(s)
  渡辺栄一郎, 川島祐介, 柿原知, 高見尚平, 高澤慎也, 小原收, 藤代準.
- Journal Title
  
  肝胆膵
  
  Volume: 83 Pages: 577-586
- Data Source
  KAKENHI-PROJECT-20K20469
[Journal Article] Toward proteome-wide exploration of proteins in dried blood spots using liquid chromatography-coupled mass spectrometry2021
- Author(s)
  Daisuke Nakajima, Osamu Ohara, Yusuke Kawashima
- Journal Title
  
  Proteomics
  
  Volume: - Issue: 23-24
- DOI
  10.1002/pmic.202100019
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21K07877
[Journal Article] HaloTag-based conjugation of proteins to barcoding-oligonucleotides2020
- Author(s)
  3.Yazaki J*, Kawashima Y, Ogawa T, Kobayashi A, Okoshi M, Watanabe T, Yoshida S, Kii I, Egami S, Amagai M, Hosoya T, Shiroguchi K, Ohara O
- Journal Title
  
  Nucleic Acids Res
  
  Volume: 48 Issue: 2 Pages: e8-e8
- DOI
  10.1093/nar/gkz1086
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-18H05411, KAKENHI-PROJECT-19K05745, KAKENHI-PROJECT-19H02856
[Journal Article] Discovery of Candidate Stool Biomarker Proteins for Biliary Atresia Using Proteome Analysis by Data-Independent Acquisition Mass Spectrometry2020
- Author(s)
  Watanabe E, Kawashima Y, Suda W, Kakihra T, Takazawa S, Nakajima D, Nakamura R, Nishi A, Suzuki K, Ohara O, Fujishiro J
- Journal Title
  
  proteomes
  
  Volume: 8(4) Issue: 4 Pages: 36-36
- DOI
  10.3390/proteomes8040036
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K20469, KAKENHI-PROJECT-19K24007
[Journal Article] Optimization of data-independent acquisition mass spectrometry for deep and highly sensitive proteomic analysis2019
- Author(s)
  Yusuke Kawashima, Eiichiro Watanabe, Taichi Umeyama, Daisuke Nakajima, Masahira Hattori, Kenya Honda, Osamu Ohara
- Journal Title
  
  International journal of molecular sciences
  
  Volume: 20 Issue: 23 Pages: 5932-5932
- DOI
  10.3390/ijms20235932
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K24007, KAKENHI-PROJECT-20K20469
[Journal Article] Development of a NanoLC?MS/MS System Using a Nonporous Reverse Phase Column for Ultrasensitive Proteome Analysis2018
- Author(s)
  Kawashima Yusuke、Ohara Osamu
- Journal Title
  
  Analytical Chemistry
  
  Volume: 90 Issue: 21 Pages: 12334-12338
- DOI
  10.1021/acs.analchem.8b03382
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K18360
[Journal Article] Identification of Protein Targets of 12/15-Lipoxygenase-Derived Lipid Electrophiles in Mouse Peritoneal Macrophages Using Omega-Alkynyl Fatty Acid2018
- Author(s)
  Isobe Yosuke、Kawashima Yusuke、Ishihara Tomoaki、Watanabe Kenji、Ohara Osamu、Arita Makoto
- Journal Title
  
  ACS Chemical Biology
  
  Volume: 13 Issue: 4 Pages: 887-893
- DOI
  10.1021/acschembio.7b01092
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K18360, KAKENHI-PROJECT-17K18364, KAKENHI-ORGANIZER-15H05897, KAKENHI-PLANNED-15H05898
[Patent] DIAGNOSIS METHOD, DIAGNOSIS KIT AND TREATMENT METHOD FOR BILIARY ATRESIA2020
- Inventor(s)
  渡辺栄一郎、藤代準、小原收、川島祐介、服部正平、須田亙
- Industrial Property Rights Holder
  渡辺栄一郎、藤代準、小原收、川島祐介、服部正平、須田亙
- Industrial Property Rights Type
  特許
- Filing Date
  2020
- Data Source
  KAKENHI-PROJECT-20K20469
[Patent] DIAGNOSIS METHOD, DIAGNOSIS KIT AND TREATMENT METHOD FOR BIRIALY ATRESIA2019
- Inventor(s)
  渡辺栄一郎、藤代準、小原收、川島祐介、服部正平、須田亙
- Industrial Property Rights Holder
  渡辺栄一郎、藤代準、小原收、川島祐介、服部正平、須田亙
- Industrial Property Rights Type
  特許
- Filing Date
  2019
- Overseas
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] 臨床プロテオミクスを目指した炭酸ナトリウム沈殿法を用いて調製した乾燥ろ紙血由来のタンパク質の簡便かつ高感度な解析法の開発2022
- Author(s)
  中島大輔、小原收、川島祐介
- Organizer
  第70回質量分析総合討論会(2022)
- Data Source
  KAKENHI-PROJECT-21K07877
[Presentation] Discovery of candidate stool biomarker proteins for biliary atresia using deep proteome analysis by data-independent acquisition mass spectrometry(AOHUPO Presentation Award)2021
- Author(s)
  Eiichiro Watanabe, Yusuke Kawashima, Wataru Suda, Tomo Kakihara, Shinya Takazawa, Daisuke Nakajima, Ren Nakamura, Akira Nishi, Kan Suzuki, Osamu Ohara, Jun Fujishiro.
- Organizer
  第19回大会JHUPO. 2021.7.19-21. 徳島
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] Discovery of candidate stool biomarker proteins for biliary atresia using deep proteome analysis by data-independent acquisition mass spectrometry (Young Scientist Award) (Agilent Technology Award)2021
- Author(s)
  Eiichiro Watanabe, Yusuke Kawashima, Wataru Suda, Tomo Kakihara, Shinya Takazawa, Daisuke Nakajima, Ren Nakamura, Akira Nishi, Kan Suzuki, Osamu Ohara, Jun Fujishiro.
- Organizer
  10th AOHUPO. 2021.6.30-7.2 Pusan, Korea
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] Discovery of candidate stool biomarker proteins for biliary atresia using deep proteome analysis by data-independent acquisition mass spectrometry(The Best Asian Poster Award)2021
- Author(s)
  Eiichiro Watanabe, Yusuke Kawashima, Wataru Suda, Tomo Kakihara, Shinya Takazawa, Daisuke Nakajima, Ren Nakamura, Akira Nishi, Kan Suzuki, Osamu Ohara, Jun Fujishiro.
- Organizer
  HUPO. 2021.11.15-19. Vancouver, Canada
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] 基礎研究者と共同して構築した便を対象としたData-independent acquisition mass spectrometry(DIA-MS)ベースプロテオーム解析による胆道閉鎖症の早期診断マーカー探索2021
- Author(s)
  渡辺栄一郎、川島祐介、須田亙、柿原知、高澤慎也、中島大輔、中村蓮、西明、鈴木完、小原收、藤代準.
- Organizer
  第121回日本外科学会学術集会
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] Urinary proteome analysis for ureteropelvic junction obstruction by data-independent acquisition mass spectrometry2021
- Author(s)
  Jun Fujishiro, Eiichiro Watanabe, Ryo Konno, Yusuke Kawashima, Shinya Takazawa, Mariko Yoshida, Osamu Ohara
- Organizer
  54th Annual Scientific Meeting of the Pacific Association of Pediatric Surgeons, PAPS2021
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] 便プロテオーム解析を用いた葛西術後の消化管機能に関する研究2020
- Author(s)
  三宅和恵、渡辺栄一郎、川島祐介、柿原知、高澤慎也、西明、鈴木完、小原收、藤代準
- Organizer
  第47回日本小児栄養消化器肝臓病学会
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] Development of a HaloTag-Based, NAPPA and Barcoding, Protein Profiling Technology2019
- Author(s)
  Junshi Yazaki1, Yusuke Kawashima1, Taisaku Ogawa2, Atsuo Kobayashi1, Mayu Okoshi1, Takashi Watanabe1, Suguru Yoshida3, Isao Kii4, Shohei Egami5,6, Masayuki Amagai5,6, Takamitsu Hosoya3,7, Katsuyuki Shiroguchi2,8,9 and Osamu Ohara1
- Organizer
  日本プロテオーム学会
- Data Source
  KAKENHI-PROJECT-19K05745
[Presentation] 便を用いた網羅的タンパク解析技術・プロテオーム解析を利用した胆道閉鎖症研究2019
- Author(s)
  渡辺栄一郎、川島祐介、須田　亙、柿原　知、朝長高太郎、星野論子、則内友博、一城千都絵、鈴木完、服部正平、小原收、藤代準
- Organizer
  第46回日本胆道閉鎖症研究会
- Data Source
  KAKENHI-PROJECT-20K20469
[Presentation] 無孔性逆相カラムを用いた高感度プロテオーム解析システムの構築2017
- Author(s)
  川島祐介、小原收
- Organizer
  日本プロテオーム学会
- Data Source
  KAKENHI-PROJECT-17K18360

1. 藤代準 (60528438)

# of Collaborated Projects: 3 results

# of Collaborated Products: 9 results
2. 須田亙 (20590847)

# of Collaborated Projects: 2 results

# of Collaborated Products: 6 results
3. 紺野亮 (00935736)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
4. 中島大輔 (30370935)

# of Collaborated Projects: 2 results

# of Collaborated Products: 3 results
5. OKADA SATOSHI (80457241)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. Yazaki Junshi (70391597)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
7. 金兼弘和 (00293324)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 小原收 (20370926)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 津村弥来 (80646274)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 小川覚之 (40436572)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. 齊藤祐子 (60344066)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 岡部篤史 (80778118)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 神田輝 (50333472)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 武森信暁 (40533047)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 星野歩子 (00819964)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 石川将己 (10758684)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. 梅村啓史 (90456070)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. 森実真 (80423333)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. 山崎修 (90294462)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
20. 土田祥央 (90410422)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
21. 鈴木啓介 (50724887)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
22. 古村眞 (10422289)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
23. 田畑泰彦 (50211371)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
24. 渡辺栄一郎 (40623327)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
25. 成島聖子 (80578336)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
26. SHIROGUCHI Katsuyuki

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

KAWASHIMA YUSUKE 川島 祐介

Kawashima Yusuke 川島 祐介

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Development of analysis method of inflammation-related proteins in serum using inflammatory cytokine receptorsPrincipal Investigator

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[Journal Article] Data-Independent Acquisition Mass Spectrometry-Based Deep Proteome Analysis for Hydrophobic Proteins from Dried Blood Spots Enriched by Sodium Carbonate Precipitation2022

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[Journal Article] 胆道閉鎖症の便蛋白/MS解析とバイオマーカーとしての意義2021

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[Journal Article] Toward proteome-wide exploration of proteins in dried blood spots using liquid chromatography-coupled mass spectrometry2021

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KAWASHIMA YUSUKE 川島祐介

Kawashima Yusuke 川島祐介