Tsunoda Tatsuhiko 角田達彦

… Alternative Names

TSUNODA Tatsuhiko 角田達彦

角田達彦ツノダタツヒコ

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Researcher Number	10273468
Other IDs	https://orcid.org/0000-0002-5439-7918
External Links
Affiliation (Current)	2025: 東京大学, 大学院理学系研究科(理学部), 教授
Affiliation (based on the past Project Information) *help	2019 – 2025: 東京大学, 大学院理学系研究科(理学部), 教授 2015 – 2021: 東京医科歯科大学, 難治疾患研究所, 教授 2017: 独立行政法人理化学研究所, 統合生命医科学研究センター, グループディレクター 2015 – 2017: 国立研究開発法人理化学研究所, 統合生命医科学研究センター, グループディレクター 2014: 理化学研究所, 統合生命医科学研究センター, 医科学数理研究グループリーダー … More 2013 – 2014: 独立行政法人理化学研究所, その他部局等, その他 2012 – 2014: 独立行政法人理化学研究所, 統合生命医科学研究センター, グループディレクター 2012: 理化学研究所, ゲノム医科学研究センター, チームリーダー 2011 – 2012: 独立行政法人理化学研究所, 統計解析・技術開発グループ, グループディレクター 2011: (独)理化学研究所, ゲノム医科学研究センター, グループリーダー 2010: (独)理化学研究所, ゲノム医科学研究センター, グループ・リーダー 2010: 独立行政法人理化学研究所, 情報解析研究チーム, チームリーダー 2006 – 2007: 独立行政法人理化学研究所, 遺伝子多型情報解析研究チーム, チームリーダー 2000 – 2001: 理化学研究所, 遺伝子多型情報解析研究チーム, チームリーダー(研究職) 1999: 東京大学, 医科学研究所, 助手 1995 – 1996: 京都大学, 工学研究科, 助手 Less
Review Section/Research Field	Principal Investigator Basic Section 43060:System genome science-related / Medical genome science / Biological Sciences / Intelligent informatics / Biological Sciences / 基礎ゲノム科学 / Complex systems Except Principal Investigator Basic Section 56040:Obstetrics and gynecology-related / Basic Section 56020:Orthopedics-related / Biological Sciences … More / Basic Section 53020:Cardiology-related / Psychiatric science / Statistical science / Intelligent informatics / Cerebral neurosurgery / Statistical science / Neurochemistry/Neuropharmacology / Complex systems Less
Keywords	Principal Investigator 遺伝子発現 / マイクロアレイ / SNP / non-coding RNA / ゲノム / 遺伝学 / 遺伝子 / 遺伝子多型 / 組織特異性 / 治療予測 … More / ゲノミクス / 画像変換 / マルチオミクス / 深層学習 / Drug Response / Clinical Biomarkers / Personalized Medicine / Network Analysis / Machine Learning / Drug Design / Multi-Omics / Personalised Medicine / 肺腺がんの化学療法 / DREAMチャレンジ / 新規ゲノム解析ソリューション / アプタマーデータベース / 創薬と毒性 / liver cancer / succinylation prediction / amino acids / promoter regions / transcription factors / mutations / がん発症 / 翻訳後修飾マーク / サクシニル化部位予測 / 転写因子結合部位 / ドライバー変異 / XX / オミクス解析 / 代謝アダプテーション / トランスオミクス / trranscriptome / transcription product database / tissue specificitiy / whole-genome transcriptome / ゲノムワイド / トランスクリピトーム / 組織特異的遺伝子発現 / タイリングアレイ / トランスクリプトーム / 転写産物データベース / 全ゲノム転写産物解析 / ゲノムワイド関連解析 / 国際がんゲノムコンソーシアム / 日本人ゲノム / 構造多型 / コピー数多型 / 多様性 / がんゲノム / クロマチン制御遺伝子 / 遺伝統計学 / 肝臓がん / 情報工学 / オーダーメイド医療 / 予測 / 次世代シークエンサー / オミックス解析 / 統計数学 / 癌 / 相関解析 / 環境要因 / 最尤法 / 疾患 / データマイニング / タンパク質 / 相互作用 / 転写抑制 / 転写因子間相互作用 / プロモータ / p53 / 転写因子結合配列 / 転写因子 / 転写制御 / 談話理解 / 英語 / 照応解決 / 係受け先決定 / 多義性解消 / 場面 / 事象 / 文脈 … More Except Principal Investigator 卵巣癌 / トランスクリプトーム / 薬剤反応性 / ゲノム / 統計数学 / 薬剤スクリーニング / オミクス / マルチオミクス / オルガノイド / 遺伝子解析 / 悪性軟部腫瘍 / オミクス計測 / 代謝 / 代謝アダプテーション / トランスオミクス / 治療応答性 / オミックス解析 / ゲノム解析 / 二値分類 / 遺伝子発現情報 / ゲノム情報 / 心房細動 / 薬剤感受性 / 薬剤感受性試験 / 悪性腹膜中皮腫 / トランスレーショナル研究 / 疾患修飾遺伝子 / モデル動物 / 網羅的解析 / トランスクリプトーム解析 / マウス背景遺伝子 / アミロイドβ / オミックス / 疾患リスク遺伝子 / アルツハイマー病 / 診断法開発 / 統計解析 / 臨床試験 / 社会医学 / データ解析 / 研究デザイン / 臨床研究 / 個別化医療 / 機械学習 / 生物統計学 / 統計科学 / Parsing / Morphological Analysis / Text Corpus / Natural Language Processing / 構文解析 / 形態素解析 / テキストコーパス / 自然言語処理 / 発生・分化 / 脳神経疾患 / 細胞・組織 / 癌 / niche / undifferentiated state / proliferation / survival / glioma stem cell / ncRNA / 神経分化 / 神経幹細胞 / ノンコーディングRAN / ノンコーディングRNA / ヒトES細胞 / 腫瘍学 / 遺伝統計学 / バイオインフォマティクス / ゲノム科学 / システム生物学 / がん Less

オミクスデータを量子計算に導き量子古典ハイブリッド機械学習で予測モデルを作る方法Principal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  2025 – 2029
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43060:System genome science-related
- Research Institution
  The University of Tokyo
Multi-omics of ovarian cancer organoids for development of novel therapeutics against drug-resistant ovarian cancers
- Principal Investigator
  
  千代田達幸
- Project Period (FY)
  2021 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 56040:Obstetrics and gynecology-related
- Research Institution
  Keio University
Integrated Multi-Omics Analysis Methodology with Image Transformation and Deep Learning for Pathophysiology and Drug Response MechanismsPrincipal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  2020 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43060:System genome science-related
- Research Institution
  The University of Tokyo
Development of personalized soft tissue sarcoma therapies through the integrated genomic analysis
- Principal Investigator
  
  中谷文彦
- Project Period (FY)
  2020 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 56020:Orthopedics-related
- Research Institution
  National Cancer Center Japan
Precision medicine for ovarian cancer by DSRT and genomic analysis
- Principal Investigator
  
  TOMINAGA Eiichiro
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 56040:Obstetrics and gynecology-related
- Research Institution
  Keio University
Elucidation of molecular mechanism that defines therapeutic effects of atrial fibrillation and risk diagnosis
- Principal Investigator
  
  Tanaka Toshihiro
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 53020:Cardiology-related
- Research Institution
  Tokyo Medical and Dental University
Development and application of analysis methodology for next generation human omicsPrincipal Investigator
- Principal Investigator
  
  Tsunoda Tatsuhiko
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
  Tokyo Medical and Dental University
Trans-omic analysis of metabolic adaptation
- Principal Investigator
  
  Kueoda Shinya
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Comprehensive research on statistical methodologies and their applications for development of personalized medicine
- Principal Investigator
  
  Matsui Shigeyuki
- Project Period (FY)
  2016 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Statistical science
- Research Institution
  Nagoya University
マルチオミックス解析による遺伝子発現制御領域内のがん化を導く変異の予測Principal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for JSPS Fellows
- Research Field
  
  Medical genome science
- Research Institution
  Tokyo Medical and Dental University
予防・個別化医療のためのビッグデータ・予測解析Principal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for JSPS Fellows
- Research Field
  
  Medical genome science
- Research Institution
  Institute of Physical and Chemical Research
Alzheimer disease modifier gene: Identification by novel transcriptions and functional analysis
- Principal Investigator
  
  Morihara Takashi
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Psychiatric science
- Research Institution
  Osaka University
Establishment of methodology for assessment of disclosure risk and confidentiality of individual genome by random partition
- Principal Investigator
  
  MANO Shuhei
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Statistical science
- Research Institution
  The Institute of Statistical Mathematics
Analysis of niche involved with survival, proliferation, and maintenance of undifferentiated state of glioma stem cell
- Principal Investigator
  
  KANEMURA Yonehiro
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Cerebral neurosurgery
- Research Institution
  National Hospital Organization Osaka National Hospital Institute for Clinical Reserch
Analysis of non-coding RNAs regulating neural differentiation of human ES cells.
- Principal Investigator
  
  OKADA Yohei
- Project Period (FY)
  2011 – 2012
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Neurochemistry/Neuropharmacology
- Research Institution
  Keio University
Systems Cancer Research Executive Committee
- Principal Investigator
  
  MIYANO SATORU
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  The University of Tokyo
Bioinformatic and statistical genetic analysis of cancerPrincipal Investigator
- Principal Investigator
  
  TSUNODA Tatsuhiko
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  The Institute of Physical and Chemical Research
Analysis of relationship between whole-genome transcriptome in human tissues and characteristics of the human genomePrincipal Investigator
- Principal Investigator
  
  TSUNODA Tatsuhiko
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  The Institute of Physical and Chemical Research
大規模多型・発現プロファイルからの多要因データマイニングによる疾患機序経路の解明Principal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  2001
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
大規模多型・発現プロファイルからの多要因データマイニングによる疾患機序経路の解明Principal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
転写発現制御機構を解析するパーザ、文法、辞書の構築Principal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  1999 – 2000
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  Intelligent informatics
- Research Institution
  The Institute of Physical and Chemical Research
  The University of Tokyo
事象情報の文間授受に基づく英語文章の文脈解析パ-ザの研究Principal Investigator
- Principal Investigator
  
  角田達彦
- Project Period (FY)
  1996
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  Intelligent informatics
- Research Institution
  Kyoto University
Building a Japanese Parsed Corpus
- Principal Investigator
  
  NAGAO Makoto
- Project Period (FY)
  1995 – 1996
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Intelligent informatics
- Research Institution
  KYOTO UNIVERSITY

[Book] Subject-Specific-Frequency-Band for Motor Imagery EEG Signal Recognition Based on Common Spatial Spectral Pattern. In: Nayak A., Sharma A. (eds) PRICAI 2019: Trends in Artificial Intelligence. PRICAI 2019. Lecture Notes in Computer Science, vol 116712019
- Author(s)
  Kumar S, Sharma A, Tsunoda T
- Total Pages
  10
- Publisher
  Springer
- ISBN
  9783030299118
- Data Source
  KAKENHI-PROJECT-16H06299
[Book] Genome-Wide Association Studies,2019
- Author(s)
  Tsunoda T, Tanaka T, Nakamura Y
- Total Pages
  209
- Publisher
  Springer
- ISBN
  9789811381775
- Data Source
  KAKENHI-PROJECT-16H06299
[Book] 遺伝統計学と疾患ゲノムデータ解析（２章ー１０「GWASをトランスオミクスで読み解く」）2018
- Author(s)
  柚木克之、角田達彦、黒田真也（岡田随象編）
- Total Pages
  10
- Publisher
  株式会社メディカルドゥ
- ISBN
  9784944157631
- Data Source
  KAKENHI-PLANNED-17H06307
[Journal Article] Advances in AI and machine learning for predictive medicine2024
- Author(s)
  Sharma Alok、Lysenko Artem、Jia Shangru、Boroevich Keith A.、Tsunoda Tatsuhiko
- Journal Title
  
  Journal of Human Genetics
  
  Volume: - Issue: 10 Pages: 487-497
- DOI
  10.1038/s10038-024-01231-y
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20302
[Journal Article] DeepInsight-3D architecture for anti-cancer drug response prediction with deep-learning on multi-omics2023
- Author(s)
  Sharma Alok、Lysenko Artem、Boroevich Keith A.、Tsunoda Tatsuhiko
- Journal Title
  
  Scientific Reports
  
  Volume: 13 Issue: 1
- DOI
  10.1038/s41598-023-29644-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20302
[Journal Article] scDeepInsight: a supervised cell-type identification method for scRNA-seq data with deep learning2023
- Author(s)
  Jia Shangru、Lysenko Artem、Boroevich Keith A、Sharma Alok、Tsunoda Tatsuhiko
- Journal Title
  
  Briefings in Bioinformatics
  
  Volume: 24 Issue: 5
- DOI
  10.1093/bib/bbad266
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20302
[Journal Article] Association between high immune activity and worse prognosis in uveal melanoma and low-grade glioma in TCGA transcriptomic data2022
- Author(s)
  Matsuo Hitoshi、Kamatani Takashi、Hamba Yu、Boroevich Keith A.、Tsunoda Tatsuhiko
- Journal Title
  
  BMC Genomics
  
  Volume: 23 Issue: 1
- DOI
  10.1186/s12864-022-08586-6
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K20302
[Journal Article] Immune subtypes and neoantigen-related immune evasion in advanced colorectal cancer2022
- Author(s)
  Sugawara Toshitaka、Miya Fuyuki、Ishikawa Toshiaki、Lysenko Artem、Nishino Jo、Kamatani Takashi、Takemoto Akira、Boroevich Keith A.、Kakimi Kazuhiro、Kinugasa Yusuke、Tanabe Minoru、Tsunoda Tatsuhiko
- Journal Title
  
  iScience
  
  Volume: 25 Issue: 2 Pages: 103740-103740
- DOI
  10.1016/j.isci.2022.103740
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-23K20302
[Journal Article] 生活習慣病のトランスオミクス解析2021
- Author(s)
  柚木克之、小鍛冶俊也、角田達彦、黒田真也
- Journal Title
  
  医学のあゆみ
  
  Volume: 278 Pages: 501-509
- Data Source
  KAKENHI-PLANNED-17H06307
[Journal Article] Forecasting the spread of COVID-19 using LSTM network2021
- Author(s)
  Kumar Shiu、Sharma Ronesh、Tsunoda Tatsuhiko、Kumarevel Thirumananseri、Sharma Alok
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 22 Issue: S6
- DOI
  10.1186/s12859-021-04224-2
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-23K20302
[Journal Article] Single-stranded and double-stranded DNA-binding protein prediction using HMM profiles2021
- Author(s)
  Sharma Ronesh、Kumar Shiu、Tsunoda Tatsuhiko、Kumarevel Thirumananseri、Sharma Alok
- Journal Title
  
  Analytical Biochemistry
  
  Volume: 612 Pages: 113954-113954
- DOI
  10.1016/j.ab.2020.113954
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Journal Article] DeepFeature: feature selection in nonimage data using convolutional neural network2021
- Author(s)
  Sharma Alok、Lysenko Artem、Boroevich Keith A、Vans Edwin、Tsunoda Tatsuhiko
- Journal Title
  
  Briefings in Bioinformatics
  
  Volume: 22 Issue: 6
- DOI
  10.1093/bib/bbab297
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299, KAKENHI-PROJECT-23K20302
[Journal Article] Deep Learning Approach for Automated Detection of Myopic Maculopathy and Pathologic Myopia in Fundus Images2021
- Author(s)
  DU Ran、Xie Shiqi、Fang Yuxin、Igarashi-Yokoi Tae、Moriyama Muka、Ogata Satoko、Tsunoda Tatsuhiko、Kamatani Takashi、Yamamoto Shinji、Cheng Ching-Yu、Saw Seang-Mei、Ting Daniel、Wong Tien Y.、Ohno-Matsui Kyoko
- Journal Title
  
  Ophthalmology Retina
  
  Volume: - Issue: 12 Pages: 1235-1244
- DOI
  10.1016/j.oret.2021.02.006
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Journal Article] Predicting protein-peptide binding sites with a deep convolutional neural network2020
- Author(s)
  Wardah Wafaa、Dehzangi Abdollah、Taherzadeh Ghazaleh、Rashid Mahmood A.、Khan M.G.M.、Tsunoda Tatsuhiko、Sharma Alok
- Journal Title
  
  Journal of Theoretical Biology
  
  Volume: 496 Pages: 110278-110278
- DOI
  10.1016/j.jtbi.2020.110278
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Journal Article] DeepInsight法：ゲノミクスなど非画像データを深層学習で扱う方法2020
- Author(s)
  角田達彦
- Journal Title
  
  生物物理
  
  Volume: 60 Pages: 149-152
- NAID
  130007847787
- Data Source
  KAKENHI-PROJECT-23K20302
[Journal Article] RAM-PGK: Prediction of Lysine Phosphoglycerylation Based on Residue Adjacency Matrix2020
- Author(s)
  Chandra Abel Avitesh、Sharma Alok、Dehzangi Abdollah、Tsunoda Tatushiko
- Journal Title
  
  Genes
  
  Volume: 11 Issue: 12 Pages: 1524-1524
- DOI
  10.3390/genes11121524
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Journal Article] PupStruct: Prediction of Pupylated Lysine Residues Using Structural Properties of Amino Acids2020
- Author(s)
  Singh Vineet、Sharma Alok、Dehzangi Abdollah、Tsunoda Tatushiko
- Journal Title
  
  Genes
  
  Volume: 11 Issue: 12 Pages: 1431-1431
- DOI
  10.3390/genes11121431
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Journal Article] Quantification of multicellular colonization in tumor metastasis using exome‐sequencing data2020
- Author(s)
  Nishino Jo、Watanabe Shuichi、Miya Fuyuki、Kamatani Takashi、Sugawara Toshitaka、Boroevich Keith A.、Tsunoda Tatsuhiko
- Journal Title
  
  International Journal of Cancer
  
  Volume: 146 Issue: 9 Pages: 2488-2497
- DOI
  10.1002/ijc.32910
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] HseSUMO: Sumoylation site prediction using half-sphere exposures of amino acids residues2019
- Author(s)
  Sharma Alok、Lysenko Artem、L?pez Yosvany、Dehzangi Abdollah、Sharma Ronesh、Reddy Hamendra、Sattar Abdul、Tsunoda Tatsuhiko
- Journal Title
  
  BMC Genomics
  
  Volume: 19 Issue: S9 Pages: 1-7
- DOI
  10.1186/s12864-018-5206-8
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K18156, KAKENHI-PROJECT-16H06299
[Journal Article] Brain wave classification using long short-term memory network based OPTICAL predictor2019
- Author(s)
  Kumar Shiu、Sharma Alok、Tsunoda Tatsuhiko
- Journal Title
  
  Scientific Reports
  
  Volume: 9 Issue: 1
- DOI
  10.1038/s41598-019-45605-1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] GlyStruct: glycation prediction using structural properties of amino acid residues2019
- Author(s)
  Reddy Hamendra Manhar、Sharma Alok、Dehzangi Abdollah、Shigemizu Daichi、Chandra Abel Avitesh、Tsunoda Tatushiko
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 19 Issue: S13
- DOI
  10.1186/s12859-018-2547-x
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] A comparison of machine learning classifiers for dementia with Lewy bodies using miRNA expression data2019
- Author(s)
  Shigemizu Daichi、Akiyama Shintaro、Asanomi Yuya、Boroevich Keith A.、Sharma Alok、Tsunoda Tatsuhiko、Sakurai Takashi、Ozaki Kouichi、Ochiya Takahiro、Niida Shumpei
- Journal Title
  
  BMC Medical Genomics
  
  Volume: 12 Issue: 1 Pages: 150-150
- DOI
  10.1186/s12920-019-0607-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] Risk prediction models for dementia constructed by supervised principal component analysis using miRNA expression data2019
- Author(s)
  Shigemizu D, Akiyama S, Asanomi Y, Boroevich KA, Sharma A, Tsunoda T, Matsukuma K, Ichikawa M, Sudo H, Takizawa S, Sakurai T, Ozaki K, Ochiya T, Niida S.
- Journal Title
  
  Communication Biology
  
  Volume: 2 Issue: 1 Pages: 77-77
- DOI
  10.1038/s42003-019-0324-7
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H04726, KAKENHI-PROJECT-16H06299, KAKENHI-PROJECT-18H05285
[Journal Article] EvolStruct-Phogly: incorporating structural properties and evolutionary information from profile bigrams for the phosphoglycerylation prediction2019
- Author(s)
  Chandra Abel Avitesh、Sharma Alok、Dehzangi Abdollah、Tsunoda Tatushiko
- Journal Title
  
  BMC Genomics
  
  Volume: 19 Issue: S9 Pages: 984-984
- DOI
  10.1186/s12864-018-5383-5
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] Bigram-PGK: phosphoglycerylation prediction using the technique of bigram probabilities of position specific scoring matrix2019
- Author(s)
  Chandra Abel、Sharma Alok、Dehzangi Abdollah、Shigemizu Daichi、Tsunoda Tatsuhiko
- Journal Title
  
  BMC Molecular and Cell Biology
  
  Volume: 20 Issue: S2 Pages: 57-57
- DOI
  10.1186/s12860-019-0240-1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions2019
- Author(s)
  Sharma Ronesh、Sharma Alok、Patil Ashwini、Tsunoda Tatsuhiko
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 19 Issue: S13
- DOI
  10.1186/s12859-018-2396-7
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture2019
- Author(s)
  Sharma Alok、Vans Edwin、Shigemizu Daichi、Boroevich Keith A.、Tsunoda Tatsuhiko
- Journal Title
  
  Scientific Reports
  
  Volume: 9 Issue: 1 Pages: 11399-11399
- DOI
  10.1038/s41598-019-47765-6
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] Integrated analysis of human genetic association study and mouse transcriptome suggests LBH and SHF genes as novel susceptible genes for amyloid-β accumulation in Alzheimer's disease.2018
- Author(s)
  Yamaguchi-Kabata Y, Morihara T, Ohara T, Ninomiya T, Takahashi A, Akatsu H, Hashizume Y, Hayashi N, Shigemizu D, Boroevich KA, Ikeda M, Kubo M, Takeda M, Tsunoda T.
- Journal Title
  
  Hum Genet.
  
  Volume: 37(6-7) Issue: 6-7 Pages: 521-533
- DOI
  10.1007/s00439-018-1906-z
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K08725, KAKENHI-PROJECT-17K10301, KAKENHI-PROJECT-18K07565, KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H05379, KAKENHI-PROJECT-18H03121
[Journal Article] SumSec: Accurate Prediction of Sumoylation Sites Using Predicted Secondary Structure2018
- Author(s)
  Dehzangi Abdollah、Lopez Yosvany、Taherzadeh Ghazaleh、Sharma Alok、Tsunoda Tatsuhiko
- Journal Title
  
  Molecules
  
  Volume: 23 Issue: 12 Pages: 3260-3260
- DOI
  10.3390/molecules23123260
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] Empirical Bayes estimation of semi-parametric hierarchical mixture models for unbiased characterization of polygenic disease architectures2018
- Author(s)
  Nishino J, Kochi Y, Shigemizu D, Kato M, Ikari K, Ochi H, Noma H, Matsui K, Morizono T, Boroevich K, Tsunoda T, Matsui S.
- Journal Title
  
  Frontiers in Genetics
  
  Volume: 9 Pages: 115-115
- DOI
  10.3389/fgene.2018.00115
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K12401, KAKENHI-PROJECT-16H06299
[Journal Article] Navigating the disease landscape: knowledge representations for contextualizing molecular signatures.2018
- Author(s)
  Mansoor Saqi, Artem Lysenko, Yi-Ke Guo, Tatsuhiko Tsunoda, Charles Auffray
- Journal Title
  
  Briefings In Bioinformatics
  
  Volume: - Issue: 2 Pages: 609-623
- DOI
  10.1093/bib/bby025
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] PhoglyStruct: Prediction of phosphoglycerylated lysine residues using structural properties of amino acids2018
- Author(s)
  Chandra Abel、Sharma Alok、Dehzangi Abdollah、Ranganathan Shoba、Jokhan Anjeela、Chou Kuo-Chen、Tsunoda Tatsuhiko
- Journal Title
  
  Scientific Reports
  
  Volume: 8 Issue: 1 Pages: 17923-17923
- DOI
  10.1038/s41598-018-36203-8
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] Empirical Bayes estimation of semi-parametric hierarchical mixture models for unbiased characterization of polygenic disease architectures2018
- Author(s)
  Nishino J, Kochi Y, Shigemizu D, Kato M, Ikari K, Ochi H, Noma H, Matsui K, Morizono T, Boroevich K, Tsunoda T, Matsui S.
- Journal Title
  
  Frontiers in Genetics
  
  Volume: 印刷中
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] Success: evolutionary and structural properties of amino acids prove effective for succinylation site prediction2018
- Author(s)
  Lopez Yosvany、Sharma Alok、Dehzangi Abdollah、Lal Sunil Pranit、Taherzadeh Ghazaleh、Sattar Abdul、Tsunoda Tatsuhiko
- Journal Title
  
  BMC Genomics
  
  Volume: 19(Suppl 1) Issue: S1 Pages: 923-923
- DOI
  10.1186/s12864-017-4336-8
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15385, KAKENHI-PROJECT-16H06299
[Journal Article] Improving succinylation prediction accuracy by incorporating the secondary structure via helix, strand and coil, and evolutionary information from profile bigrams2018
- Author(s)
  Dehzangi Abdollah、Lopez Yosvany、Lal Sunil Pranit、Taherzadeh Ghazaleh、Sattar Abdul、Tsunoda Tatsuhiko、Sharma Alok
- Journal Title
  
  PLOS ONE
  
  Volume: 13 Issue: 2 Pages: e0191900-e0191900
- DOI
  10.1371/journal.pone.0191900
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15385, KAKENHI-PROJECT-16H06299
[Journal Article] An integrative machine learning approach for prediction of toxicity-related drug safety2018
- Author(s)
  Lysenko Artem、Sharma Alok、Boroevich Keith A、Tsunoda Tatsuhiko
- Journal Title
  
  Life Science Alliance
  
  Volume: 1 Issue: 6 Pages: 1-14
- DOI
  10.26508/lsa.201800098
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K18156, KAKENHI-PLANNED-17H06307, KAKENHI-PROJECT-16H06299
[Journal Article] IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis2018
- Author(s)
  Shigemizu Daichi、Miya Fuyuki、Akiyama Shintaro、Okuda Shujiro、Boroevich Keith A、Fujimoto Akihiro、Nakagawa Hidewaki、Ozaki Kouichi、Niida Shumpei、Kanemura Yonehiro、Okamoto Nobuhiko、Saitoh Shinji、Kato Mitsuhiro、Yamasaki Mami、Matsunaga Tatsuo、Mutai Hideki、Kosaki Kenjiro、Tsunoda Tatsuhiko
- Journal Title
  
  Scientific Reports
  
  Volume: 8 Issue: 1 Pages: 5608-5608
- DOI
  10.1038/s41598-018-23978-z
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K15530, KAKENHI-PROJECT-16K19068, KAKENHI-PROJECT-18K09336, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-16H04726, KAKENHI-PROJECT-18H02680, KAKENHI-PROJECT-16K07211, KAKENHI-PROJECT-16H06299
[Journal Article] OPAL: prediction of MoRF regions in intrinsically disordered protein sequences2018
- Author(s)
  Sharma Ronesh、Raicar Gaurav、Tsunoda Tatsuhiko、Patil Ashwini、Sharma Alok
- Journal Title
  
  Bioinformatics
  
  Volume: 34 Issue: 11 Pages: 1850-1858
- DOI
  10.1093/bioinformatics/bty032
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] MoRFPred-plus: Computational Identification of MoRFs in Protein Sequences using Physicochemical Properties and HMM profiles2018
- Author(s)
  Sharma Ronesh、Bayarjargal Maitsetseg、Tsunoda Tatsuhiko、Patil Ashwini、Sharma Alok
- Journal Title
  
  Journal of Theoretical Biology
  
  Volume: 437 Pages: 9-16
- DOI
  10.1016/j.jtbi.2017.10.015
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] Sample Size for Successful Genome-Wide Association Study of Major Depressive Disorder2018
- Author(s)
  Nishino Jo、Ochi Hidenori、Kochi Yuta、Tsunoda Tatsuhiko、Matsui Shigeyuki
- Journal Title
  
  Frontiers in Genetics
  
  Volume: 9
- DOI
  10.3389/fgene.2018.00227
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] Arete - candidate gene prioritization using biological network topology with additional evidence types2017
- Author(s)
  Lysenko A, Boroevich KA, Tsunoda T
- Journal Title
  
  BioData Mining
  
  Volume: 10 Issue: 1 Pages: 22-22
- DOI
  10.1186/s13040-017-0141-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] Divisive hierarchical maximum likelihood clustering2017
- Author(s)
  Sharma A, Lopez Y, Tsunoda T
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 18 Issue: S16 Pages: 546-546
- DOI
  10.1186/s12859-017-1965-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06299, KAKENHI-PROJECT-15F15385
[Journal Article] The prediction models for postoperative overall survival and disease-free survival in patients with breast cancer2017
- Author(s)
  Shigemizu Daichi、Iwase Takuji、Yoshimoto Masataka、Suzuki Yasuyo、Miya Fuyuki、Boroevich Keith A、Katagiri Toyomasa、Zembutsu Hitoshi、Tsunoda Tatsuhiko
- Journal Title
  
  Cancer Medicine
  
  Volume: 6 Issue: 7 Pages: 1627-1638
- DOI
  10.1002/cam4.1092
- NAID
  120006894608
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K07211, KAKENHI-PROJECT-16H06299
[Journal Article] PSSM-Suc: Accurately predicting succinylation using position specific scoring matrix into bigram for feature extraction2017
- Author(s)
  Dehzangi Abdollah、Lopez Yosvany、Lal Sunil Pranit、Taherzadeh Ghazaleh、Michaelson Jacob、Sattar Abdul、Tsunoda Tatsuhiko、Sharma Alok
- Journal Title
  
  Journal of Theoretical Biology
  
  Volume: 425 Pages: 97-102
- DOI
  10.1016/j.jtbi.2017.05.005
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15385
[Journal Article] SucStruct: Prediction of Succinylated Lysine Residues by Using Structural Properties of Amino Acids2017
- Author(s)
  Yosvany Lopez, Abdollah Dehzangi, Sunil Pranit Lal, Ghazaleh Taherzadeh, Jacob Michaelson, Abdul Sattar, Tatsuhiko Tsunoda, Alok Sharma
- Journal Title
  
  Analytical Biochemistry
  
  Volume: 527 Pages: 24-32
- DOI
  10.1016/j.ab.2017.03.021
- Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15385
[Journal Article] 2D-EM clustering approach for high-dimensional data through folding feature vectors2017
- Author(s)
  Sharma A, Kamola PJ, Tsunoda T
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 18 Issue: S16 Pages: 547-547
- DOI
  10.1186/s12859-017-1970-8
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299, KAKENHI-PROJECT-15F15776
[Journal Article] Hierarchical Maximum Likelihood Clustering Approach.2017
- Author(s)
  Sharma A, Boroevich KA, Shigemizu D, Kamatani Y, Kubo M, Tsunoda T.
- Journal Title
  
  IEEE Transactions on Biomedical Engineering
  
  Volume: 64 Issue: 1 Pages: 112-122
- DOI
  10.1109/tbme.2016.2542212
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06299
[Journal Article] Stepwise iterative maximum likelihood clustering approach2016
- Author(s)
  Alok Sharma, Daichi Shigemizu, Keith A. Boroevich, Yosvany Lopez, Yoichiro Kamatani, Michiaki Kubo, Tatsuhiko Tsunoda
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 17 Issue: 1 Pages: 319-319
- DOI
  10.1186/s12859-016-1184-5
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15385, KAKENHI-PROJECT-16H06299
[Journal Article] Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity2015
- Author(s)
  Fujimoto A, Furuta M, Shiraishi Y, Shigemizu D, Abe T, Boroevich KA, Nakano K, Yamamoto Y, Tanaka H, Shibuya T, Shibata T, Kubo M, Chayama K, Miyano S, Tsunoda T, Nakagawa H, 他
- Journal Title
  
  Nature Communications
  
  Volume: 6 Issue: 1 Pages: 6120-6120
- DOI
  10.1038/ncomms7120
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PUBLICLY-25134717, KAKENHI-PUBLICLY-25134720, KAKENHI-PROJECT-25670375, KAKENHI-PUBLICLY-26114721, KAKENHI-PROJECT-26430196
[Journal Article] 数理科学・計算科学とゲノム2015
- Author(s)
  角田達彦
- Journal Title
  
  血管医学
  
  Volume: 16 Pages: 85-91
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] WHSC1 Promotes Oncogenesis through Regulation of NIMA-related-kinase-7 in Squamous Cell Carcinoma of the Head and Neck2015
- Author(s)
  Saloura V, Cho HS, Kyiotani K, Alachkar H, Zuo Z, Nakakido M, Tsunoda T, Seiwert T, Lingen M, Licht J, Nakamura Y, Hamamoto R
- Journal Title
  
  Molecular Cancer Research
  
  Volume: 13 Issue: 2 Pages: 293-304
- DOI
  10.1158/1541-7786.mcr-14-0292-t
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] がん研究におけるゲノムビッグデータ解析と臨床応用2014
- Author(s)
  角田達彦
- Journal Title
  
  実験医学
  
  Volume: 32 Pages: 2046-2051
- Data Source
  KAKENHI-PROJECT-24300109
[Journal Article] がん研究におけるゲノムビッグデータ解析と臨床応用2014
- Author(s)
  角田達彦
- Journal Title
  
  実験医学
  
  Volume: 32 Pages: 2046-2051
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Transcriptome analysis of distinct mouse strains reveals kinesin light chain-1 splicing as as amyloid beta accumulation modifier2014
- Author(s)
  Morihara, T., Hayashi, N., Yokokoji, M., Akatsu, H., Silverman, MA., Kimura, N., Saito, Y., Suzuki, T., Yanagida, K., Tanaka, T., Kazui, H., Kudo, T., Kodama, TS., Sato, M., Hashimoto, R., Tagami, S., Okochi, M., Ytoh, N., Nishitomi, K., Takamura, H., Katayama, T., Hashizumi, Y., Kimura, R., Kamino, K., Takeda, M
- Journal Title
  
  Proc. Acad. Natl. Sci. USA
  
  Volume: 111 Issue: 7 Pages: 2638-2643
- DOI
  10.1073/pnas.1307345111
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23390017, KAKENHI-PROJECT-23591703, KAKENHI-PROJECT-23791332, KAKENHI-PROJECT-24591708, KAKENHI-PROJECT-24591709, KAKENHI-PROJECT-25290039, KAKENHI-PROJECT-25293250, KAKENHI-PROJECT-25461768, KAKENHI-PROJECT-26293010, KAKENHI-PROJECT-26461746, KAKENHI-PROJECT-26461747
[Journal Article] The construction of risk prediction models using GWAS data and its application to a type 2 diabetes prospective cohort2014
- Author(s)
  Shigemizu D, Abe T, Morizono T, Johnson TA, Boroevich KA, Hirakawa Y, Ninomiya T, Kiyohara Y, Kubo M, Nakamura Y, Maeda S, Tsunoda T
- Journal Title
  
  PLoS One
  
  Volume: 9 Issue: 3 Pages: e92549-e92549
- DOI
  10.1371/journal.pone.0092549
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-221S0001
[Journal Article] Integrated analysis of whole genome and transcriptome sequencing reveals diverse transcriptomic aberrations driven by somatic genomic changes in liver cancers2014
- Author(s)
  Shiraishi Y, Fujimoto A, Furuta M, Chayama K, Tsunoda T, Miyano S, and Nakagawa H, 他
- Journal Title
  
  PLoS One
  
  Volume: 9 Issue: 12 Pages: e114263-e114263
- DOI
  10.1371/journal.pone.0114263
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PUBLICLY-25134717, KAKENHI-PROJECT-25670375, KAKENHI-PROJECT-26430196, KAKENHI-PROJECT-26670383, KAKENHI-PROJECT-221S0001
[Journal Article] The histone methyltransferase Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1) is involved in human carcinogenesis.2013
- Author(s)
  Kang D, Cho HS, Toyokawa G, Kogure M, Yamane Y, Iwai Y, Hayami S, Tsunoda T, Field HI, Matsuda K, Neal DE, Ponder BA, Maehara Y, Nakamura Y, Hamamoto R.
- Journal Title
  
  Genes Chromosomes Cancer
  
  Volume: 52 Issue: 2 Pages: 126-139
- DOI
  10.1002/gcc.22012
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-22681030
[Journal Article] Single-nucleotide polymorphisms in GALNT8 are associated with the response to interferon therapy for chronic hepatitis C2013
- Author(s)
  Nakano R, Maekawa T, Abe H, Hayashida Y, Ochi H, Tsunoda T, Kumada H, Kamatani N, Nakamura Y, Chayama K
- Journal Title
  
  The Journal of General Virology
  
  Volume: 94 Issue: 1 Pages: 81-89
- DOI
  10.1099/vir.0.044396-0
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Deregulation of the histone demethylase JMJD2A is involved in human carcinogenesis through regulation of the G(1)/S transition.2013
- Author(s)
  Kogure M, Takawa M, Cho HS, Toyokawa G, Hayashi K, Tsunoda T, Kobayashi T, Daigo Y, Sugiyama M, Atomi Y, Nakamura Y, Hamamoto R.
- Journal Title
  
  Cancer Letters
  
  Volume: 336 Issue: 1 Pages: 76-84
- DOI
  10.1016/j.canlet.2013.04.009
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-23650624, KAKENHI-PROJECT-24390145, KAKENHI-PROJECT-221S0001
[Journal Article] A practical method to detect SNVs and indels from whole genome and exome sequencing data.2013
- Author(s)
  Shigemizu D, Fujimoto A, Akiyama S, Abe T, Nakano K, Boroevich KA, Yamamoto Y, Furuta M, Kubo M, Nakagawa H, Tsunoda T.
- Journal Title
  
  Scientific Reports
  
  Volume: 3 Issue: 1 Pages: 2161-2161
- DOI
  10.1038/srep02161
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Integrated molecular analysis of clear-cell renal cell carcinoma.2013
- Author(s)
  Sato Y, Yoshida K
- Journal Title
  
  Nature Genet.
  
  Volume: 45 Issue: 8 Pages: 860-867
- DOI
  10.1038/ng.2699
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12J04216, KAKENHI-PLANNED-22134008, KAKENHI-PLANNED-24112006, KAKENHI-PROJECT-24221011, KAKENHI-PROJECT-24700272, KAKENHI-PROJECT-25291023, KAKENHI-PROJECT-25670446, KAKENHI-PROJECT-25730173, KAKENHI-PROJECT-25860521
[Journal Article] Morphological and microarray analyses of human hepatocytes from xenogeneic host livers.2013
- Author(s)
  Tateno C, Miya F, Wake K, Kataoka M, Ishida Y, Yamasaki C, Yanagi A, Kakuni M, Wisse E, Verheyen F, Inoue K, Sato K, Kudo A, Arii S, Itamoto T, Asahara T, Tsunoda T, Yoshizato K.
- Journal Title
  
  Laboratory investigation
  
  Volume: 93 Issue: 1 Pages: 54-71
- DOI
  10.1038/labinvest.2012.158
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-24591868
[Journal Article] The oncogenic polycomb histone methyltransferase EZH2 methylates lysine 120 on histone H2B and competes ubiquitination.2013
- Author(s)
  Kogure M, Takawa M, Saloura V, Sone K, Piao L, Ueda K, Ibrahim R, Tsunoda T, Sugiyama M, Atomi Y, Nakamura Y, Hamamoto R.
- Journal Title
  
  Neoplasia
  
  Volume: 15 Issue: 11 Pages: 1251-1261
- DOI
  10.1593/neo.131436
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-22680064
[Journal Article] IRX4 at 5p15 suppresses prostate cancer growth through the interaction with vitamin D receptor, conferring prostate cancer2012
- Author(s)
  Ha Nguyen H, 他
- Journal Title
  
  Human Molecular Genetics
  
  Volume: 21 Issue: 9 Pages: 2076-2085
- DOI
  10.1093/hmg/dds025
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-10J02102, KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-22390306, KAKENHI-PROJECT-23791782, KAKENHI-PROJECT-24590412
[Journal Article] High-Risk Ovarian Cancer Based on 126-Gene Expression Signature Is Uniquely Characterized by Downregulation of Antigen Presentation Pathway2012
- Author(s)
  Kosuke Yoshihara
- Journal Title
  
  Clinical Cancer Research
  
  Volume: 18 Issue: 5 Pages: 1374-1385
- DOI
  10.1158/1078-0432.ccr-11-2725
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-09F09353, KAKENHI-PROJECT-21390449, KAKENHI-PROJECT-21592141, KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-23510242, KAKENHI-PROJECT-23791835, KAKENHI-PROJECT-24650149
[Journal Article] The JmjC domain-containing histone demethylase KDM3A is a positive regulator of the G(1)/S transition in cancer cells via transcriptional regulation of the HOXA1 gene2011
- Author(s)
  Cho HS, Toyokawa G, Daigo Y, Hayami S, Masuda K, Ikawa N, Yamane Y, Maejima K, Tsunoda T, Field HI, Kelly JD, Neal DE, Ponder BA, Maehara Y, Nakamura Y, Hamamoto R
- Journal Title
  
  Int J Cancer
  
  Volume: (in press) Issue: 3
- DOI
  10.1002/ijc.26501
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21390178, KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-22681030
[Journal Article] Variation in the DEPDC5 locus is associated with progression to hepatocellular carcinoma in chronic hepatitis C virus carriers2011
- Author(s)
  Miki D, Ochi H, Hayes CN, Abe H, Yoshima T, Aikata H, Ikeda K, KumadaH, Toyota J, Morizono T, Tsunoda T, Kubo M, Nakamura Y, Kamatani N, Chayama K
- Journal Title
  
  Nat Genet
  
  Volume: 43 Issue: 8 Pages: 797-800
- DOI
  10.1038/ng.876
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21390229, KAKENHI-PLANNED-22116010, KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-22659147, KAKENHI-PROJECT-22790646, KAKENHI-PROJECT-221S0001
[Journal Article] Dysregulation of PRMT1 and PRMT6, type I arginine methyltransferases, is involved in various types of human cancers2011
- Author(s)
  M.Yoshimatsu, G.Toyokawa, S.Hayami, M.Unoki, T.Tsunoda, H.I.Field, J.D.Kelly, D.E.Neal, Y.Maehara, B.A.Ponder, Y.Nakamura, R.Hamamoto
- Journal Title
  
  International Journal of Cancer
  
  Volume: 128 Issue: 3 Pages: 562-573
- DOI
  10.1002/ijc.25366
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-22659246
[Journal Article] Common variants on 14q32 and 13q12 are associated with DLBCL susceptibility2011
- Author(s)
  V.Kumar, K.Matsuo, A.Takahashi, N.Hosono, T.Tsunoda, N.Kamatani, S.Y.Kong, H.Nakagawa, R.Cui, C.Tanikawa, M.Seto, Y.Morishima, M.Kubo, Y.Nakamura, K.Matsuda
- Journal Title
  
  Journal of Human Genetics
  
  Volume: 56 Issue: 6 Pages: 436-439
- DOI
  10.1038/jhg.2011.35
- NAID
  10030659704
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-23710316
[Journal Article] Association of a novel long non-coding RNA in 8q24 with prostate cancer susceptibility2011
- Author(s)
  S.Chung, H.Nakagawa, M.Uemura, L.Piao, K.Ashikawa, N.Hosono, R.Takata, S.Akamatsu, T.Kawaguchi, T.Morizono, T.Tsunoda, Y.Daigo, K.Matsuda, N.Kamatani, Y.Nakamura, M.Kubo
- Journal Title
  
  Cancer Science
  
  Volume: 102 Issue: 1 Pages: 245-252
- DOI
  10.1111/j.1349-7006.2010.01737.x
- NAID
  10029289301
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Overexpression of LSD1 contributes to human carcinogenesis through chromatin regulation in various cancers2011
- Author(s)
  S.Hayami, J.D.Kelly, H.S.Cho, M.Yoshimatsu, M.Unoki, T.Tsunoda, H.I.Field, D.E.Neal, H.Yamaue, B.A.J.Ponder, Y.Nakamura, R.Hamamoto
- Journal Title
  
  International Journal of Cancer
  
  Volume: 128 Issue: 3 Pages: 574-586
- DOI
  10.1002/ijc.25349
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Inferring Haplotypes of Copy Number Variations From High-Throughput Data With Uncertainty2011
- Author(s)
  M.Kato, S.Yoon, N.Hosono, A.Leotta, J.Sebat, T.Tsunoda, M.Q.Zhang
- Journal Title
  
  G3 : Genes, Genomes, Genetics
  
  Volume: 1 Issue: 1 Pages: 35-42
- DOI
  10.1534/g3.111.000174
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] hzAnalyzer : Detection, quantification, and visualization of contiguous homozygosity in high-density genotyping datasets2011
- Author(s)
  T.A.Johnson, Y.Niimura, H.Tanaka, Y.Nakamura, T.Tsunoda
- Journal Title
  
  Genome Biology
  
  Volume: 12 Issue: 3
- DOI
  10.1186/gb-2011-12-3-r21
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-23770271
[Journal Article] Histone Lysine Methyltransferase Wolf-Hirschhorn Syndrome Candidate 1 Is Involved in Human Carcinogenesis through Regulation of the Wnt Pathway2011
- Author(s)
  G.Toyokawa, H.S.Cho, K.Masuda, Y.Yamane, M.Yoshimatsu, S.Hayami, M.Takawa, Y.Iwai, Y.Daigo, E.Tsuchiya, T.Tsunoda, H.I.Field, J.D.Kelly, D.E.Neal, Y.Maehara, B.A.Ponder, Y.Nakamura, R.Hamamoto
- Journal Title
  
  Neoplasia
  
  Volume: 13 Issue: 10 Pages: 887-898
- DOI
  10.1593/neo.11048
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] A genome-wide association study identifies locus at 10q22 associated with clinical outcomes of adjuvant tamoxifen therapy for breast cancer patients in Japanese2011
- Author(s)
  K.Kiyotani, T.Mushiroda, T.Tsunoda, T.Morizono, N.Hosono, M.Kubo, Y.Tanigawara, CK.Imamura, DA.Flockhart, F.Aki, K.Hirata, Y.Takatsuka, M.Okazaki, S.Ohsumi, T.Yamakawa, M.Sasa, Y.Nakamura, H.Zembutsu
- Journal Title
  
  Human Molecular Genetics
  
  Volume: (オンライン出版済) Issue: 7 Pages: 1665-1672
- DOI
  10.1093/hmg/ddr597
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-22790179, KAKENHI-PROJECT-23390037, KAKENHI-PROJECT-24300338
[Journal Article] The histone demethylase JMJD2B plays an essential role in human carcinogenesis through positive regulation of cyclin-dependent kinase 62011
- Author(s)
  Toyokawa G, Cho H-S, Iwai Y, Yoshimatsu M, Takawa M, Hayami S, Maejima K, Shimizu N, Tanaka H, Tsunoda T, Field H, Kelly J, Neal D, Ponder B, Maehara Y, Nakamura Y, Hamamoto R
- Journal Title
  
  Cancer Prev.Res.
  
  Volume: 4 Issue: 12 Pages: 2051-2061
- DOI
  10.1158/1940-6207.capr-11-0290
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21390285, KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-23791050
[Journal Article] Enhanced Expression of EHMT2 Is Involved in the Proliferation of Cancer Cells through Negative Regulation of SIAH12011
- Author(s)
  H.S.Cho, J.D.Kelly, S.Hayami, G.Toyokawa, M.Takawa, M.Yoshimatsu, T.Tsunoda, H.I.Field, D.E.Neal, B.A.Ponder, Y.Nakamura, R.Hamamoto
- Journal Title
  
  Neoplasia
  
  Volume: 13 Issue: 8 Pages: 676-684
- DOI
  10.1593/neo.11512
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Predicting response of bladder cancers to gemcitabine and carboplatin neoadjubant chemotherapy through genome-wide gene expression profiling2011
- Author(s)
  Y.Kato, H.Zembutsu, R.Takata, F.Miya, T.Tsunoda, W.Obara, T.Fujioka, Y.Nakamura
- Journal Title
  
  Experimental and Therapeutic Medicine
  
  Volume: 2 Issue: 1 Pages: 47-56
- DOI
  10.3892/etm.2010.166
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Common variant in 6q26-q27 is associated with distal colon cancer in an Asian population2011
- Author(s)
  R.Cui, Y.Okada, S.G.Jang, J.L.Ku, J.G.Park, Y.Kamatani, N.Hosono, T.Tsunoda, V.Kumar, C.Tanikawa, N.Kamatani, R.Yamada, M.Kubo, Y.Nakamura, K.Matsuda
- Journal Title
  
  Gut
  
  Volume: 60 Issue: 6 Pages: 799-805
- DOI
  10.1136/gut.2010.215947
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008, KAKENHI-PROJECT-23710316
[Journal Article] Whole genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing.2010
- Author(s)
  A.Fujimoto, H.Nakagawa, N.Hosono, K.Nakano, T.Abe, K.A.Boroevich, M.Nagasaki, R.Yamaguchi, T.Shibuya, M.Kubo, S.Miyano, Y.Nakamura, T.Tsunoda.
- Journal Title
  
  Nature Genetics
  
  Volume: 42 Pages: 931-936
- NAID
  40019159184
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Journal Article] Population-genetic nature of copy number variations in the human genome.2010
- Author(s)
  M.Kato, T.Kawaguchi, S.Ishikawa, T.Umeda, R.Nakamichi, M.H.Shapero, K.W.Jones, Y.Nakamura, H.Aburatani, T.Tsunoda.
- Journal Title
  
  Human Molecular Genetics
  
  Volume: 19 Pages: 761-773
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22134008
[Patent] iPS細胞のクローンの選択方法、及びその選択方法に用いる遺伝子の選択方法2012
- Inventor(s)
  岡田洋平、岡野栄之、角田達彦、宮冬樹
- Industrial Property Rights Holder
  学校法人慶應義塾
- Filing Date
  2012-02-27
- Overseas
- Data Source
  KAKENHI-PROJECT-23650194
[Presentation] 深層学習が拓くオミクス医科学2023
- Author(s)
  角田達彦
- Organizer
  第61回日本癌治療学会学術集会特別WS「ポストゲノム時代の人工知能（AI）研究」
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] High-throughput drug screening using an organoid library revealed novel therapeutics and a drug target for ovarian clear cell carcinoma2023
- Author(s)
  Takuma Yoshimura, Tatsuyuki Chiyoda, Takashi Kamatani, Mio Takahashi, Kensuke Sakai, Tomoko Yoshihama, Wataru Yamagami, Tatsuhiko Tsunoda, Mamoru Tanaka, Daisuke Aoki
- Organizer
  日本産科婦人科学会　学術講演会
- Data Source
  KAKENHI-PROJECT-23K21475
[Presentation] 新たなオミクス医科学を拓く深層学習と数理科学2023
- Author(s)
  角田達彦
- Organizer
  第44回日本炎症・再生医学会・シンポジウム2「オミックス最前線」
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] 【若手産婦人科医がつなぐTR,基礎研究が面白い!】難治性卵巣癌の新規治療開発を目標とした,オルガノイドライブラリを用いたTR2023
- Author(s)
  吉村拓馬, 千代田達幸, 鎌谷高志, 高橋美央, 坂井健良, 山上亘, 角田達彦, 青木大輔
- Organizer
  65回　婦人科腫瘍学会
- Data Source
  KAKENHI-PROJECT-23K21475
[Presentation] ベンチワークから臨床へ繋げる婦人科がん治療に対する新たな展望　Development of novel treatment for ovarian cancer by omics analysis using organoids2023
- Author(s)
  千代田達幸, 吉村拓馬, 高橋美央, 鎌谷高志, 平田桃, 地阪光代, 坂巻智美, 和田美智子, 坂井健良, 角田達彦, 山上亘
- Organizer
  61回　癌治療学会　ワークショップ
- Invited
- Data Source
  KAKENHI-PROJECT-23K21475
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2021
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  ERCIM-JST Joint Symposium on Big Data and Artificial Intelligence. 2021
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] 深層学習が拓く新たなゲノム医科学2021
- Author(s)
  角田達彦
- Organizer
  第16回日本がん分子標的治療学会TRワークショップ
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] ゲノム医科学を推進するデータ駆動型研究2021
- Author(s)
  角田達彦
- Organizer
  AMED「脳とこころ」疾患メカプロジェクト進捗報告会
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] ゲノム医科学を推進する深層学習と数理科学2021
- Author(s)
  角田達彦
- Organizer
  第25回日本がん分子標的治療学会学術集会・シンポジウム2 「AI」
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] 新たな知によるゲノム医科学2021
- Author(s)
  角田達彦
- Organizer
  東京大学ゲノム医科学研究機構2020年度シンポジウム
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2021
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application 2021
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] ゲノム医科学を推進する深層学習と数理科学2021
- Author(s)
  角田達彦
- Organizer
  第25回日本がん分子標的治療学会学術集会・シンポジウム2 「AI」
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2021
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] 深層学習が拓く新たなゲノム医科学2021
- Author(s)
  角田達彦
- Organizer
  第16回日本がん分子標的治療学会TRワークショップ
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] ゲノム医科学を推進する深層学習と数理科学2021
- Author(s)
  角田達彦
- Organizer
  第25回日本がん分子標的治療学会学術集会・シンポジウム2 「AI」
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] ゲノム医科学を推進するデータ駆動型研究2021
- Author(s)
  角田達彦
- Organizer
  AMED「脳とこころ」疾患メカプロジェクト進捗報告会
- Invited
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2021
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  ERCIM-JST Joint Symposium on Big Data and Artificial Intelligence
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K20302
[Presentation] 新たな知によるゲノム医科学2021
- Author(s)
  角田達彦
- Organizer
  東京大学ゲノム医科学研究機構2020年度シンポジウム
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] ゲノム医科学を推進するデータ駆動型研究2021
- Author(s)
  角田達彦
- Organizer
  AMED「脳とこころ」疾患メカプロジェクト進捗報告会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Personalized Cancer Medicine with Heterogeneity and Immunological Analysis.2020
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Personalized Cancer Medicine with Heterogeneity and Immunological Analysis2020
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Data-driven Medical Sciences with Omic Analysis.2019
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  Moonshot International Symposium 2019
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] 全ゲノム解析による糖尿病などの疾患の発症や治療・予後予測に向けて2019
- Author(s)
  角田達彦
- Organizer
  AI医療活用研究会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Medical Big Data Analysis for Precision Medicine.2019
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST Joint International Symposium for Big Data
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Cancer heterogeneity and immunology for precision medicine.2019
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Data-driven Medical Sciences with Omic Analysis2019
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  Moonshot International Symposium
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Omic big data analysis drives precision medicine.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 8th Annual Translational Bioinformatics Conference/2018 Annual Conference of Korean Society for Bioinformatics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Trans-omic Analysis strategy for precision medicine.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 2nd International Symposium for Trans-Omics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Public big data accelerate medical science research.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 63rd Annual Meeting of the Japan Society of Human Genetics.
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Public Big Data Accelerate Medical Science Research.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  Symposium “Public database and application for medicine in Japan and Asia”, The 63rd Annual Meeting of the Japan Society of Human Genetics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] ゲノム医科学の進展とプレシジョン医療の推進.2018
- Author(s)
  角田達彦
- Organizer
  東北メディカルメガバンク第16回ゲノム・オミックス連携推進セミナー
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Trans-omic Analysis Strategy for Precision Medicine.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 2nd International Symposium for Trans-Omics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Omic analysis with AI drives precision medicine.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 5th RIKEN-KI/SciLifeLab Joint Symposium
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Omic Big Data Analysis Drives Precision Medicine.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 8th Annual Translational Bioinformatics Conference/2018 Annual Conference of Korean Society for Bioinformatics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Trans-omic and Trans-species Analysis Drives Precision Medicine.2018
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 41st Annual Meeting of the Molecular Biology Society of Japan
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] 臨床研究におけるビッグデータの活用.2018
- Author(s)
  角田達彦
- Organizer
  臨床研究統計コース, 統計数理研究所
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Omic analysis drives precision medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  International Conference for Precision Cancer Medicine
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Multi-omic analysis for precision cancer medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  DNA sequencing technologies and their application in practice WS
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Trans-omic analysis drives precision medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 1st International Symposium for Trans-Omics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Multiomics and clinical analysis of cancer2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application 2017
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Omic analysis drives precision medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  International Conference for Precision Cancer Medicine 2017
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Predicting the Site of Origin of Human Cancers by Examining Somatic Mutations in Promoters and Gene Bodies2017
- Author(s)
  Yosvany Lopez and Tatsuhiko Tsunoda
- Organizer
  11th International Symposium of The Institute Network
- Place of Presentation
  徳島大学蔵本キャンパス（徳島県徳島市）
- Year and Date
  2017-01-26
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15385
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST Big Data Fields Joint Meeting 2017
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Multiomics and clinical analysis of cancer2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST International Symposium on Big Data Application
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  CREST Big Data Fields Joint Meeting
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] 医学・医療ビッグデータによるマルチオミックス解析2017
- Author(s)
  角田達彦
- Organizer
  東京医科歯科大学‐早稲田大学連携ワークショップ
- Invited
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] ゲノムビッグデータと人工知能による未来の医療2017
- Author(s)
  角田達彦
- Organizer
  市民公開講座 2017
- Invited
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] セミパラメトリック階層混合モデルによる複雑疾患GWASの解析 - 多遺伝因子構造の理解に向けて2017
- Author(s)
  西野穣, 高地雄太, 重水大智, 加藤護, 猪狩勝則, 越智秀典, 野間久史, 松井孝太, 大谷隆浩, 森園隆, Keith A Boroevich, 角田達彦, 松井茂之
- Organizer
  第27回日本疫学会学術総会
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] オミックス解析によるゲノム医療の新たな展開2017
- Author(s)
  角田達彦
- Organizer
  科研費シンポジウム「統計科学が切り拓く個別化医療：方法論・実践のフロンティア」
- Invited
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] 医学・医療ビッグデータによるマルチオミックス解析2017
- Author(s)
  角田達彦
- Organizer
  東京医科歯科大学‐早稲田大学連携ワークショップ
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] オミックス解析によるゲノム医療の新たな展開2017
- Author(s)
  角田達彦
- Organizer
  第 8 回生物統計ネットワークシンポジウム
- Invited
- Data Source
  KAKENHI-PLANNED-17H06307
[Presentation] Trans-omic analysis drives precision medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 1st International Symposium for Trans-Omics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Multi-omic analysis for precision cancer medicine2017
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  DNA sequencing technologies and their application in practice WS
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Survey of Highly Mutated Transcription Factor Binding Sites in Human Cancers2016
- Author(s)
  Yosvany Lopez, Alok Sharma and Tatsuhiko Tsunoda
- Organizer
  15th International Conference on Bioinformatics
- Place of Presentation
  Singapore (Singapore)
- Year and Date
  2016-09-21
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15385
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2016
- Author(s)
  T.Tsunoda
- Organizer
  CREST Big Data Field Joint Symposium 2016
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Exploring etiologies, sub-classification, and risk prediction of diseases based on big-data analysis of clinical and whole omics data in medicine2016
- Author(s)
  T.Tsunoda
- Organizer
  CREST Big Data Fields Joint Meeting 2016
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] 複雑疾患GWASデータのセミパラメトリック階層混合モデル解析2016
- Author(s)
  西野穣, 高地雄太, 重水大智, 加藤護, 猪狩勝則, 越智秀典, 野間久史, 松井孝太, 森園隆, Keith A Boroevich, 角田達彦, 松井茂之
- Organizer
  第22回国際個別化医療学会学術集会
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Comparative evaluation of approaches for module identification in biological networks2016
- Author(s)
  Artem Lysenko, Piotr Kamola, Keith A. Boroevich, Tatsuhiko Tsunoda
- Organizer
  9th Annual RECOMB/ISCB Conference on Regulatory & Systems Genomics
- Place of Presentation
  Phoenix, USA
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15F15776
[Presentation] 医学・医療ビッグデータ解析による個別化医療と先制医療2016
- Author(s)
  角田達彦
- Organizer
  日本遺伝子診療学会大会シンポジウム「遺伝統計学の基礎と臨床応用」
- Invited
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Strategies for discovering disease-associated modules in integrated biological networks2016
- Author(s)
  A.Lysenko, P.J.Kamola, K.A.Boroevich, T.Tsunoda.
- Organizer
  9th Annual RECOMB/ISCB Conference on Regulatory & Systems Genomics 2016
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Trans-omic analysis strategy for precision medicine2016
- Author(s)
  T.Tsunoda
- Organizer
  The 26th Hot Spring Harbor International Symposium - Trans-omics: New Approaches in Biology and Medicine 2016
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06299
[Presentation] Transcriptome analysis of distinct mouse strains reveals KLC1 splice variant E as an Abeta accumulation modifier2015
- Author(s)
  T. Morihara, M. Sato, M. Silverman, H. Akatsu, N. Hayashi, M.. Yanagida, R. Hashimoto, H. T Suzuki T Tsunoda . Kamino, M. Takeda
- Organizer
  第38回　日本神経科学会
- Place of Presentation
  神戸
- Year and Date
  2015-07-28
- Data Source
  KAKENHI-PROJECT-26461747
[Presentation] 脳内Aβ蓄積量を規定する遺伝子産物KLC1vEの同定とその機能解析2015
- Author(s)
  "森原剛史佐藤真広赤津 Luc 林紀行橋本亮太柳田寛太山口角田達彦武田雅俊 "
- Organizer
  第60回　日本人類遺伝学会　　2015.10.14-17
- Place of Presentation
  東京
- Year and Date
  2015-10-14
- Data Source
  KAKENHI-PROJECT-26461747
[Presentation] Comprehensive analysis of genetic variation by whole genome sequencing2014
- Author(s)
  藤本明洋, 十時泰, 宮野悟, 角田逹彦, 柴田龍弘, 中川英刀
- Organizer
  金沢国際がん生物学＆アカデミア創薬シンポジウム
- Place of Presentation
  東京
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Big data for personalized medicine: whole-genome analysis of BioBank and cancer samples2014
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  英国大使館日英ビッグデータ研究ワークショップ
- Place of Presentation
  東京
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 全ゲノムビッグデータ解析によるオーダーメイド医療2014
- Author(s)
  角田達彦
- Organizer
  富士通知創薬コンソーシアム
- Place of Presentation
  汐留シティセンター, 東京
- Year and Date
  2014-04-17
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 全ゲノムビッグデータ解析によるオーダーメイド医療2014
- Author(s)
  角田達彦
- Organizer
  富士通知創薬コンソーシアム
- Place of Presentation
  東京
- Year and Date
  2014-04-07
- Invited
- Data Source
  KAKENHI-PROJECT-24300109
[Presentation] Whole Genome Big Data Analysis for Complex Diseases2014
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  3rd Global COE Workshop between BGI and University of Tokyo – Advances in Medical Genomics
- Place of Presentation
  東京
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Medical Science Mathematics for Cancer Genome Analysis2014
- Author(s)
  Tsunoda T
- Organizer
  Japanese Cancer Association
- Place of Presentation
  パシフィコ横浜, Yokohama
- Year and Date
  2014-09-26
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Analysis of mutational landscape and genetic heterogeneity in liver cancer with whole genome sequencing2014
- Author(s)
  Fujimoto A, Furuta M, Shiraishi Y, Chayama K, Miyano S, Tsunoda T, and Nakagawa H, 他
- Organizer
  American Society of Human Genetics
- Place of Presentation
  San Diego, USA
- Year and Date
  2014-10-20
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Medical Science Mathematics for Cancer Genome Analysis2014
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 73rd Annual Meeting of the Japanese Cancer Association
- Place of Presentation
  Yokohama
- Year and Date
  2014-09-26
- Invited
- Data Source
  KAKENHI-PROJECT-24300109
[Presentation] 日本人における全ゲノム間の関連についての網羅的eQTL解析2013
- Author(s)
  宮冬樹, 森園隆, 阿部哲雄, 久保充明, 角田達彦
- Organizer
  日本人類遺伝学会　第58回大会
- Place of Presentation
  仙台
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 全ゲノムシークエンス解析による遺伝的多様性の統合的理解2013
- Author(s)
  藤本明洋, 中川英刀, 角田達彦
- Organizer
  日本分子生物学会
- Place of Presentation
  神戸
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Incompletely reprogrammed human iPSCs form glioma-like tumors through genomic instability during neural differentiation2013
- Author(s)
  Okada Y, Miya, F, Koike M, Tomisato S, Tokura T, Ishihara Y, Shimojo D, Hattori C, Kanematsu D, Kanemura Y, Kohda K, Sobue G, Yamanaka S, Yuzaki M, Uchiyama Y, Ikeda E, Tsunoda T, Okano H
- Organizer
  CiRA International Symoisum 2013, Raising the Nex Generation of Stem Cell Research, Kyoto March 2013, CiRA International Symoisum 2013, Raising the Nex Generation of Stem Cell Research
- Place of Presentation
  Kyoto
- Year and Date
  2013-03-12
- Data Source
  KAKENHI-PROJECT-23650194
[Presentation] 全ゲノム・全エクソームシークエンスデータからSNV/Indelを同定する実用的手法の開発2013
- Author(s)
  重水大智, 藤本明洋, 秋山真太郎, 阿部哲雄, 中野かおる, Boroevich Keith, 山本裕二郎, 古田繭子, 久保充明, 中川英刀, 角田達彦
- Organizer
  第36回日本分子生物学会年会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Whole genome sequencing and comprehensive mutation analysis of liver cancer2013
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  SNUCRI & SNUCH Cancer Symposium
- Place of Presentation
  Korea
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 次世代シークエンサーによるがんの全ゲノム解析と解釈2013
- Author(s)
  角田達彦
- Organizer
  日本癌学会
- Place of Presentation
  横浜
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 全ゲノムシークエンスによる肝臓がんの変異と遺伝的多様性の解析2013
- Author(s)
  藤本明洋, 白石友一, 古田繭子, 後藤邦仁, 中村透, 平野聡, 山本雅一, 山上裕機, 茶山一彰, 宮野悟, 角田達彦
- Organizer
  第72回日本癌学会学術総会
- Place of Presentation
  横浜
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 全ゲノムとエクソームシークエンス解析2013
- Author(s)
  角田達彦
- Organizer
  日本人類遺伝学会第58回大会
- Place of Presentation
  仙台
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Genome-wide cis-and trans-eQTL analysis using next generation sequencer in Japanese population.2013
- Author(s)
  Fuyuki Miya, Takashi Morizono, Michiaki Kubo, Tatsuhiko Tsunoda
- Organizer
  第36回日本分子生物学会年会
- Place of Presentation
  神戸
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 全ゲノム/全エクソームシークエンスデータからのSNVs,Indels を同定する実用的手法の開発2013
- Author(s)
  重水大智, 藤本明洋, 秋山真太郎, 阿部哲雄, 中野かおる, Keith Boroevich, 山本裕二郎, 古田繭子, 久保充明, 中川英刀, 角田達彦
- Organizer
  日本人類遺伝学会　第58回大会
- Place of Presentation
  仙台
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Whole genome sequencing reveals past population history and signature of natural selection in the Japanese population2013
- Author(s)
  Akihiro Fujimoto, Tetuo Abe, Keith A Boroevich, Kaoru Nakano, Aya Sasaki, Rina Kitada, Hiroko Tanaka, Yusuke Nakamura, Satoru Miyano, Michiaki Kubo, Hidewaki Nakagawa, Tatsuhiko Tsunoda
- Organizer
  American Society of Human Genotics
- Place of Presentation
  Boston, USA
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Comprehensive analysis of genetic variation by whole genome sequencing2013
- Author(s)
  藤本明洋, 十時泰, 宮野悟, 角田逹彦, 柴田龍弘, 中川英刀
- Organizer
  CBI学会2013年大会・生命医薬情報学連合大会
- Place of Presentation
  東京
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 肝がん全ゲノム解析から判明した変異のパターンと腫瘍内遺伝的多様性2013
- Author(s)
  藤本明洋, 白石　友一, 古田　繭子, 後藤　邦仁, 中村　透, 平野　聡, 山本　雅一, 山上　裕機, 茶山　一彰, 宮野　悟, 角田　達彦, 中川　英刀
- Organizer
  日本遺伝学会
- Place of Presentation
  横浜
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Whole Genome Approach Is Revolutionizing Medicine2013
- Author(s)
  Tatsuhiko Tsunoda
- Organizer
  The 10th International Workshop on Advanced Genomics
- Place of Presentation
  東京
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Evaluation of human iPS cells byneural differentiation and tumorigenicity2012
- Author(s)
  Okada Y, Miya F, Tomisato S, Kanemura Y, Koike M, Kohda K, Yuzaki M, Uchiyama Y, Tsunoda T, Yamanaka S, Okano H
- Organizer
  ISSCR 10th annual Meeting
- Place of Presentation
  Yokohama
- Year and Date
  2012-06-15
- Data Source
  KAKENHI-PROJECT-23650194
[Presentation] 腎炎明細細胞癌の全ゲノム解析2012
- Author(s)
  奥野友介, 佐藤悠佑, 前川滋克, 佐藤亜以子, 鈴木啓道, 藤本明洋, 白石友一, 千葉健一, 田中洋子, 本間之夫, 角田達彦, 宮野悟, 小川誠司.
- Organizer
  日本癌学会学術総会
- Place of Presentation
  札幌
- Year and Date
  2012-09-19
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] リプルネガティブ乳がんのエクソーム解析. 第71回日本癌学会学術総会2012
- Author(s)
  清谷一馬, 藤本明洋, 小松正人, 吉丸哲郎, 松尾泰佑, 角田達彦, 三好康雄, 笹三徳, 片桐豊雅
- Organizer
  日本癌学会学術総会
- Place of Presentation
  札幌
- Year and Date
  2012-09-19
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 不完全にリプログラミングされたヒトiPS細胞由来神経幹細胞は分化誘導に伴うゲノム不安定化によりグリオーマ様腫瘍を形成する2012
- Author(s)
  岡田洋平、宮冬樹、小池正人、冨里周太、兼松大介、金村米博、幸田和久、柚崎通介、内山安男、池田栄二、角田達彦、山中伸弥、岡野栄之
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  福岡
- Year and Date
  2012-12-12
- Data Source
  KAKENHI-PROJECT-23650194
[Presentation] Supercomputing accelerates genomic medicine2012
- Author(s)
  T.Tsunoda
- Organizer
  Biosupercomputing Symposium
- Place of Presentation
  Tokyo
- Year and Date
  2012-12-04
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Genome medicine's milestones and future2012
- Author(s)
  T.Tsunoda
- Organizer
  International Conference on Bioinformatics
- Place of Presentation
  Bangkok, Thailand
- Year and Date
  2012-10-03
- Invited
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 局所浸潤性膀胱癌に対するネオアジュバント療法感受性予測前向き試験2012
- Author(s)
  加藤陽一郎, 前佛均, 高田亮, 岩崎一洋, 小原航, 角田達彦, 中村祐輔, 藤岡知昭
- Organizer
  日本癌学会学術総会
- Place of Presentation
  札幌
- Year and Date
  2012-09-19
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 次世代シーケンサーを用いた日本人における全ゲノム網羅的eQTL解析2012
- Author(s)
  宮冬樹, 阿部哲雄, 森園隆, 秋山真太郎, 久保充明, 角田達彦
- Organizer
  日本人類遺伝学会
- Place of Presentation
  東京
- Year and Date
  2012-10-24
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Genome-wide association study and whole-genome sequence analysis2011
- Author(s)
  T.Tsunoda
- Organizer
  JAPANESE-FINNISH JOINT SYMPOSIUM
- Place of Presentation
  Helsinki, Finland(招待講演)
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 網羅的遺伝子発現解析に基づいた浸潤性膀胱癌におけるCaGおよびM-VAC術前化学療法に対する反応性予測2011
- Author(s)
  加藤陽一郎, 前佛均, 高田亮, 小原渉, 角田達彦, 中村祐輔, 藤岡知昭
- Organizer
  日本癌学会学術総会
- Place of Presentation
  名古屋
- Year and Date
  2011-10-04
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] ゲノムワイド関連解析による乳癌タモキシフェン治療反応性予測2011
- Author(s)
  前佛均, 清谷一馬, 莚田泰誠, 角田達彦, 森園隆, 久保充明, 谷川原祐介, 今村知世, 平田公一, 大住省三, 山川卓, 笹三徳, 中村祐輔
- Organizer
  日本癌学会学術総会
- Place of Presentation
  名古屋
- Year and Date
  2011-10-04
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 疾患の未解明の遺伝力の問題に対する日本とアジアでのアプローチ2011
- Author(s)
  角田達彦
- Organizer
  日本癌学会学術総会
- Place of Presentation
  名古屋(招待講演)
- Year and Date
  2011-10-05
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 全ゲノム解析の衝撃-疾患関連遺伝子研究の爆発的進展2011
- Author(s)
  角田達彦
- Organizer
  バイオスーパーコンピューティング・シンポジウム
- Place of Presentation
  神戸
- Year and Date
  2011-02-21
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 日本人の前立腺癌発症に関連する遺伝子多型を組み合わせた発症リスク予測モデルの構築2011
- Author(s)
  高田亮, 赤松秀輔, 中川英刀, 高橋篤, Nguyen Ha, 久保充明, 角田達彦, 鎌谷直之, 羽渕友則, 小川修, 中村祐輔, 藤岡知昭
- Organizer
  日本癌学会学術総会
- Place of Presentation
  名古屋
- Year and Date
  2011-10-04
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] COMPREHENSIVE WHOLE-GENOME SEQUENCE ANALYSIS OF CANCER2011
- Author(s)
  T.Tsunoda
- Organizer
  Cancer Genomics and Epigenomics: Towards Personalized Cancer Medicine
- Place of Presentation
  Kyoto
- Year and Date
  2011-10-24
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] A genome-wide association study identified a novel susceptibility locus for hepatocellular carcinoma in chronic hepatitis C virus carriers2011
- Author(s)
  D.Miki, H.Ochi, C.Hayes, H.Abe, T.Yoshima, Y.Hayashida, H.Aikata, K.Ikeda, H.Kumada, J.Toyota, T.Tsunoda, M.Kubo, Y.Nakamura, N.Kamatani, K.Chayama
- Organizer
  Annual Meeting of the American Association for the Study of Liver Diseases
- Place of Presentation
  San Francisco
- Year and Date
  2011-11-07
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 日本人と韓国人の肺腺癌発症に関連するTP63の一塩基多型の同定2011
- Author(s)
  三木大樹, 久保充明, 角田達彦, 鎌谷直之, 茶山一彰, 高橋隆, 稲澤譲治, 中村祐輔, 醍醐弥太郎
- Organizer
  日本癌学会学術総会
- Place of Presentation
  名古屋
- Year and Date
  2011-10-04
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Evaluation of human iPS cells by neural differentiation and tumorigenicity2011
- Author(s)
  Okada Y, Miya F, Kanemura Y, Koike M, Kohda K, Yuzaki M, Uchiyam Y, Tsunoda T, Yamanaka S, Okano H
- Organizer
  8th IBRO World congress of Neuroscience
- Place of Presentation
  Florence, Italy
- Year and Date
  2011-07-16
- Data Source
  KAKENHI-PROJECT-23650194
[Presentation] ウイルス性肝細胞がんの全ゲノムシークエンス解析2011
- Author(s)
  中川英刀, 藤本明洋, 角田達彦, 長崎正朗, 柴田龍弘, 十時泰, 上野昌樹, 川上由育, 山田晃正, 茶山一彰, 山上裕機, 宮野悟, 中村祐輔
- Organizer
  日本癌学会学術総会
- Place of Presentation
  名古屋
- Year and Date
  2011-10-04
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 神経分化と造腫瘍性から迫るヒトiPS細胞の品質評価2011
- Author(s)
  岡田洋平、宮冬樹、金村米博、砂堀毅彦、小池正人、幸田和久、柚崎通介、内山安男、角田達彦、山中伸弥、岡野栄之
- Organizer
  第34回日本神経科学大会
- Place of Presentation
  横浜
- Year and Date
  2011-09-17
- Data Source
  KAKENHI-PROJECT-23650194
[Presentation] 次世代シークエンサーを用いた日本人一個体の全ゲノムシークエンスと遺伝的多様性の包括的解析2010
- Author(s)
  藤本明洋, 中川英刀, 細野直哉, 中野かおる, 阿部哲雄, 長崎正朗, 山口類, 渋谷哲朗, 久保充明, 宮野悟, 中村祐輔, 角田達彦
- Organizer
  第33回日本分子生物学会年会・第83回日本生化学会大会合同大会(BMB2010)
- Place of Presentation
  神戸
- Year and Date
  2010-12-10
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 次世代シーケンサーとタイリングアレイの転写解析データの比較検証2010
- Author(s)
  宮冬樹, 岡田洋平, 阿部哲雄, 森園隆, 鎌谷直之, 岡野栄之, 角田達彦
- Organizer
  第33回日本分子生物学会年会・第83回日本生化学会大会合同大会(BMB2010)
- Place of Presentation
  神戸
- Year and Date
  2010-12-10
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Analyzing contiguous homozygosity to quantify haplotype structure differences between case and control samples.2010
- Author(s)
  T.Johnson, T.Tanaka, M.Kubo, Y.Nakamura, T.Tsunoda.
- Organizer
  The American Society of Human Genetics 60th Annual Meeting (ASHG 2010)
- Place of Presentation
  Washington DC, USA
- Year and Date
  2010-11-04
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 国際がんゲノムコンソーシアムにおける情報解析2010
- Author(s)
  藤本明洋, 渋谷哲朗, 宮野悟, 中村祐輔, 中川英刀, 角田達彦
- Organizer
  ゲノムテクノロジー第164委員会第34回研究会
- Place of Presentation
  東京
- Year and Date
  2010-09-10
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Whole genome sequencing and accurate variant calls of a Japanese individual using massively parallel sequencing.2010
- Author(s)
  A.Fujimoto, H.Nakagawa, N.Hosono, K.Nakano, T.Abe, M.Nagasaki, R.Yamaguichi, T.Shibuya, M.Kubo, S.Miyano, Y.Nakamura, T.Tsunoda.
- Organizer
  American Society of Human Genetics 60th Annual Meeting (ASHG 2010)
- Place of Presentation
  Washigton DC, USA
- Year and Date
  2010-11-03
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] Analyzing contiguous homozygosity to quantify haplotype structure differences between case and control samples.2010
- Author(s)
  Johnson A.Todd, 田中敏博, 久保充明, 中村祐輔, 角田達彦
- Organizer
  日本人類遺伝学会第55回大会
- Place of Presentation
  大宮市
- Year and Date
  2010-10-29
- Data Source
  KAKENHI-PLANNED-22134008
[Presentation] 骨髄間葉系幹細胞の分化・増殖を規定する遺伝子の探索2008
- Author(s)
  永井康雄,森川暁,宮冬樹,角田達彦,岡野栄之,松崎有未
- Organizer
  第7回日本再生医療学会総会
- Place of Presentation
  名古屋
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Whole genome transcriptome profile of human embryonic stem cells and differentiated cells.2008
- Author(s)
  F.Miya, Y.Okada, T.Kawaguchi, Y.Kanemura, H.Okano, T.Tsunoda.
- Organizer
  The 31st Annual Meeting of the Japan Neuroscience Society
- Place of Presentation
  Tokyo
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Whole genome transcriptome profile of human embryonic stem cells and differentiated cells2008
- Author(s)
  F. Miya, Y. Okada, T. Kawaguchi, Y. Kanemura, H. Okano, T. Tsunoda
- Organizer
  第31回日本神経科学大会 Neuroscience2008
- Place of Presentation
  東京
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Search for genes that determine differentiation or proliferation of bone marrow derived mesenchymal stem cells.2008
- Author(s)
  Y.Nagai, A.Morikawa, F.Miya, T.Tsunoda, H.Okano, Y.Matszaki.
- Organizer
  The 7th Congress of the Japanese Society for Regenerative Medicine
- Place of Presentation
  Nagoya
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] タイリングアレイデータにおける正規化法の最適パラメータの探索 Searching optimal parameter values in tiling-array data normalization2007
- Author(s)
  宮冬樹,川口喬久,角田達彦
- Organizer
  第30回日本分子生物学会・第80回日本生化学会大会合同年会(BMB2007)
- Place of Presentation
  横浜
- Year and Date
  2007-12-12
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] タイリングアレイデータにおける正規化法の最適パラメータの探索Searching optimal parameter values in tiling-array data normalization2007
- Author(s)
  宮冬樹、川口喬久、角田達彦
- Organizer
  日本分子生物学会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2007-12-12
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Analysis of gene expression in dopamine or methamphetamine treated dopaminergic neuronal cells2007
- Author(s)
  Y. Irie, F. Miya, T. Tsunoda, M. Saeki, Y. Kanemura, H. Kato, Y. Tsukamoto, Y. Kamisaki, N. Miki
- Organizer
  日本薬理学会第80回年会
- Place of Presentation
  名古屋
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Analysis of gene expression in dopamine or methamphetamine treated dopaminergic neuronal cells.2007
- Author(s)
  Y.Irie, F.Miya, T.Tsunoda, M.Saeki, Y.Kanemura, H.Kato, Y.Tsukamoto, Y.Kamisaki, N.Miki.
- Organizer
  The Annual Meeting of The Japanese Pharmacological Society
- Place of Presentation
  Nagoya
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Analysis of gene expression in dopamine or methamphetamine treated dopaminergic neuronal cells2006
- Author(s)
  入江康至,宮冬樹,角田達彦,金村米博,三木直正,佐白万騎男,上崎善規
- Organizer
  第28回日本生物学的精神医学会・第36回日本神経精神薬理学会・第49回日本神経化学会合同大会
- Place of Presentation
  名古屋
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Searching optimal parameter values intiling-array data normalization. Meeting of the Japanese Biochemical Society, December 2007, Yokohama.
- Author(s)
  F.Miya, T.Kawaguchi, T.Tsunoda.
- Organizer
  The 30th Annual Meeting of the Molecular Biology Society of Japan & The 80th Annual
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Evaluation of human iPS cells by neural differentiation and tumorigenicity
- Author(s)
  Okada Y, Miya F, Tomisato S, Kanemura Y, Koike M, Kohda K, Yuzaki M, Uchiyama Y, Tsunoda T, Yamanaka S, Okano H.
- Organizer
  ISSCR 10th Annual Meeting
- Place of Presentation
  Yokohama, Japan
- Data Source
  KAKENHI-PROJECT-24592181
[Presentation] Transcriptome analysis of distinct mouse strains reveals kinesin light chain-1 splicing as an amyloid beta pathology modifier in Alzheimer’s disease: A mouse-to-human translational approach to complex diseases
- Author(s)
  T. Morihara, M. Sato, M. Silverman, H. Akatsu, N. Hayashi, M. Yokokoji, K. Yanagida, R. Hashimoto, H. Yamamori, T. Tsunoda, Y. Yamaguchi, K. Kamino, M. Takeda
- Organizer
  64th Annual Meeting of the American Society of Human Genetics (ASHG 2014)
- Place of Presentation
  San Diego, USA
- Year and Date
  2014-10-18 – 2014-10-22
- Data Source
  KAKENHI-PROJECT-26461747
[Presentation] Analysis of gene expression in dopamine or methamphetamine treated dopaminrgic neuronal cells.
- Author(s)
  Y.Irie, F.Miya, T.Tsunoda, Y.Kanemura, N.Miki, M.Saeki, Y.Kamisaki.
- Organizer
  The 28th Annual Meeting of the Japanese Society of Biological Psychiatry, The 36th Annual Meeting of the Japanese Society of Neuropsychopharmacology & The 49th Annual Meeting of Japan Neuroscience Society.
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18310134
[Presentation] Transcriptome analysis of distinct mouse strains reveals KLC1 splice variant E as an Abeta accumulation modifier
- Author(s)
  T. Morihara, N. Hayashi, H. Akatsu, M. Silverman, M. Yokokoji, N. Kimura, M. Sato, K. Kamino, Y. Yamagichi, T. Tsunoda, T. Tanaka, M. Takeda
- Organizer
  Alzheimer’s Assosication International Conference (AAIC)
- Place of Presentation
  Copenhagen,Denmark
- Year and Date
  2014-07-12 – 2014-07-17
- Data Source
  KAKENHI-PROJECT-26461747
[]

1. MIYA Fuyuki (50415311)

# of Collaborated Projects: 3 results

# of Collaborated Products: 28 results
2. OKADA Yohei (30383714)

# of Collaborated Projects: 2 results

# of Collaborated Products: 6 results
3. OOTA Hiroki (40401228)

# of Collaborated Projects: 2 results

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# of Collaborated Projects: 2 results

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11. SOGA Tomoyoshi (60338217)

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13. JOHNSON Todd (90392042)

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18. SUEMIZU Hiroshi (40332209)

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19. NAKAMURA Masato (00164335)

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20. NAGAO Makoto (30025960)

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22. Matsui Shigeyuki (80305854)

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23. Morihara Takashi (90403196)

# of Collaborated Projects: 1 results

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24. AKATSU Hiroyasu (00399734)

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35. 平沢晃 (90296658)

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36. 合屋雅彦 (30521364)

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37. 古川哲史 (80251552)

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38. 岡田眞里子 (10342833)

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39. 馬場健史 (10432444)

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40. 鈴木穣 (40323646)

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47. 松田浩一 (90401257)

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48. 千代田達幸 (40445367)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
49. 鎌谷高志 (90645764)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
50. MARUYAMA Hiroshi

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
51. LOPEZ ALVAREZ YOSVANY

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
52. KAMOLA PIOTR

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
53. OHARA Hirotaka

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
54. OZAKI Kouichi

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
55. Lysenko Artem

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
56. 醍醐弥太郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
57. 茶山一彰

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
58. TODD・A Johnson

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# of Collaborated Products: 4 results
59. 田中廣壽

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
60. 清水宣明

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
61. 斉藤伸治

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Tsunoda Tatsuhiko 角田 達彦

TSUNODA Tatsuhiko 角田 達彦

角田 達彦 ツノダ タツヒコ

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オミクスデータを量子計算に導き量子古典ハイブリッド機械学習で予測モデルを作る方法Principal Investigator

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Integrated Multi-Omics Analysis Methodology with Image Transformation and Deep Learning for Pathophysiology and Drug Response MechanismsPrincipal Investigator

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Development and application of analysis methodology for next generation human omicsPrincipal Investigator

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マルチオミックス解析による遺伝子発現制御領域内のがん化を導く変異の予測Principal Investigator

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予防・個別化医療のためのビッグデータ・予測解析Principal Investigator

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Tsunoda Tatsuhiko 角田達彦

TSUNODA Tatsuhiko 角田達彦

角田達彦ツノダタツヒコ