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SUGAWARA Hideaki  菅原 秀明

ORCIDConnect your ORCID iD *help
Researcher Number 80231372
Other IDs
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Affiliation (based on the past Project Information) *help 2017: 国立遺伝学研究所, 特任教授
2007: National Institute of Genetics, Center for Information Biology and DNA Data Bank of Japan, Professor
2005 – 2007: 国立遺伝学研究所, 生命情報・DDBL研究センター, 教授
2004 – 2007: 国立遺伝学研究所, 生命情報・DDBJ研究センター, 教授
1999 – 2000: 国立遺伝学研究所, 生命情報研究センター, 教授
1997 – 2000: National Institution of Genetics, Center for Information Biology, Professor, 生命情報センター, 教授
1996: 国立遺伝学研究所, 生命情報研究センター, 教授
Review Section/Research Field
Principal Investigator
情報システム学(含情報図書館学) / Biological Sciences
Except Principal Investigator
遺伝 / Biological Sciences / Applied veterinary science / Evolutionary biology / Biological Sciences
Keywords
Principal Investigator
CORBA / データベース / INTERNET / DATABASE / IDENTIFICATION / CLASSIFICATION / CULTURE COLLECTION / MICROORGANISMS / GENOME / BIODIBERSITY … More / WFCC(国際微生物株保存連盟) / WWW / 系統分類 / 相互運用性 / 微生物資源 / インターネット / 同定 / 分類 / 系統保存 / 微生物 / ゲノム / 生物多様性 / blast / クラスタリング / 進化 / 比較ゲノム / XML / 分散処理 … More
Except Principal Investigator
DDBJ / GenBank / EMBL / DNA / ゲノム / データベース / INSDB / NCBI / bioinformatics / Gen Bank / 生命情報学 / タンパク質 / アノテーション / 神経変性疾患 / 脳神経疾患 / 遺伝子 / 生理学 / 細胞・組織 / 蛋白質 / リソソーム / 細胞内分解 / オートファジー / Protozoa / Infectious disease / Microbe / Veterinary Medicine / Genome / cDNA / ショットガン解析 / タイレリア / 原虫 / 感染症 / 微生物 / 獣医学 / data standardization / human genes / evolutionary information / annotation / genome / biological database / International visit / 国際DNAデータバンク実務者会議 / 非タンパク質遺伝子 / チンパンジー染色体 / ヒト発現遺伝子 / イネゲノム / マイクロアレイデータ / Annotation / UniProt / DNA配列データベース / ヒト遺伝子 / 進化情報 / 多国籍 / 国際情報交換 / Human genome / 分子進化 / ヒトゲノム / EBI / protein / database / 表現型 / 疾患情報モデル / 情報生物学 / 脳・神経系 / 疾患情報 Less
  • Research Projects

    (8 results)
  • Research Products

    (22 results)
  • Co-Researchers

    (37 People)
  •  Multidisciplinary research on autophagy: from molecular mechanisms to disease states

    • Principal Investigator
      Mizushima Noboru
    • Project Period (FY)
      2013 – 2017
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  An informatics approach to the systematic understanding of a model disease

    • Principal Investigator
      GOJOBORI Takashi
    • Project Period (FY)
      2005 – 2009
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      National Institute of Genetics
  •  Genome analysis of Theileria orientalis and its functional genomics

    • Principal Investigator
      SUGIMOTO Chihiro
    • Project Period (FY)
      2005 – 2007
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Research Field
      Applied veterinary science
    • Research Institution
      Hokkaido University
  •  Collection and Investigation into Basic Evolutionary Information by Orrsite Collaboration

    • Principal Investigator
      TATENO Yoshio
    • Project Period (FY)
      2004 – 2007
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Research Field
      Evolutionary biology
    • Research Institution
      National Institute of Genetics
  •  実験手法が異なる情報源からのゲノム比較を可能とする解析システムの研究開発Principal Investigator

    • Principal Investigator
      菅原 秀明
    • Project Period (FY)
      2000
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas (C)
    • Review Section
      Biological Sciences
    • Research Institution
      National Institute of Genetics
  •  DATA ACQUISITION AND DISSEMINATION FOR WDCMPrincipal Investigator

    • Principal Investigator
      SUGAWARA Hideaki
    • Project Period (FY)
      1999 – 2000
    • Research Category
      Grant-in-Aid for Scientific Research (B).
    • Research Field
      情報システム学(含情報図書館学)
    • Research Institution
      NATIONAL INSTITUTE OF GENETICS
  •  Study on the DNA database and other biological databases

    • Principal Investigator
      GOJOBORI Takashi
    • Project Period (FY)
      1998 – 2000
    • Research Category
      Grant-in-Aid for Scientific Research (A).
    • Research Field
      遺伝
    • Research Institution
      National Institute of Genetics
  •  Study on DNA and related bioinformatics databases

    • Principal Investigator
      GOJOBORI Takashi
    • Project Period (FY)
      1995 – 1997
    • Research Category
      Grant-in-Aid for international Scientific Research
    • Research Field
      遺伝
    • Research Institution
      National Institute of Genetics

All 2009 2008 2007 2006 2005 2004

All Journal Article Book

  • [Book] DDBJの利用法2005

    • Author(s)
      五條堀孝、菅原秀明
    • Total Pages
      181
    • Publisher
      共立出版
    • Data Source
      KAKENHI-PROJECT-17019065
  • [Book] DDBJの利用法2005

    • Author(s)
      五條堀 孝, 菅原 秀明(編著)
    • Total Pages
      181
    • Publisher
      共立出版
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Book] Tsunami of data : Data resources and utilization. Microbial Genetic Resources and Biodiscovery.2004

    • Author(s)
      Sugawara, H.
    • Total Pages
      17
    • Publisher
      National Library of Australia
    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Book] Tsunami of data:Data resources and utilization.Microbial Genetic Resources and Biodiscovery2004

    • Author(s)
      Sugawara, H.
    • Total Pages
      17
    • Publisher
      National Library of Australia
    • Description
      「研究成果報告書概要(和文)」より
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Book] Tsunami of data : Data resources and utilization.(Microbial Genetic Resources and Biodiscovery.)2004

    • Author(s)
      Sugawara, H.
    • Total Pages
      17
    • Publisher
      National Library of Australia
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DDBJ Dealing with Mass Data Produced by the Second Generation Sequencer2009

    • Author(s)
      Sugawara, H.
    • Journal Title

      Nucleic Acids Res. 37(Database issue)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17019065
  • [Journal Article] DDBJ with new system and face2008

    • Author(s)
      Sugawara H.
    • Journal Title

      Nucleic Acids Research 36

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DDBJ with new system and face2008

    • Author(s)
      Sugawara H.
    • Journal Title

      Nucleic Acids Res. 36

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DDBJ working on evaluation and classification of bacterial genes in lNSDC.2007

    • Author(s)
      Sugawara, H.
    • Journal Title

      Nucleic Acids Res. 35

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DDBJ Working on Evaluation and Classification of Bacterial Genes in INSDC2007

    • Author(s)
      Sugawara, H, Abe, T, Gojobori, T., Tateno, Y.
    • Journal Title

      Nucleic Acids Res. 35(Database issue)

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DDBJ working on evaluation and classification of bacterial genes in INSDC.2007

    • Author(s)
      Sugawara, H.
    • Journal Title

      Nucleic Acids Res. 35

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DDBJ working on evaluation and classification of bacterial genes in INSDC2007

    • Author(s)
      Sugawara, H.
    • Journal Title

      Nucleic Acids Res. 35

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] A novel bioinformatics tool for phylogenetic classification of genomic sequence fragments derived from mixed genomes of uncultured environmental microbes2006

    • Author(s)
      Abe, T, Sugawara, H, Kanaya, S, Ikemura, T.
    • Journal Title

      Polar Bioscience 20

      Pages: 103-112

    • NAID

      110006199745

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] Exploration and grading of possible genes in 183 bacterial strains by a common fine protocol lead to new genes : Gene Trek in Prokaryote space (GTPS)2006

    • Author(s)
      Takehide Kosuge, Takashi Abe, Toshihisa Okido, Naoto Tanaka, Masaki Hirahata, Yutaka Maruyama, Aki Tomiki, Motoyoshi Kurokawa, Ryutaro Himeno, Satoshi Fukuchi, Satoru Miyazaki, Takashi Gojobori, Yoshio Tateno, Hideaki Sugawara
    • Journal Title

      DNA Research 13(6)

      Pages: 245-254

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DDBJ in preparation for overview of research activities behind data submissions.2006

    • Author(s)
      Okubo, K, Sugawara, H, Gojobori, T, Tateno, Y.
    • Journal Title

      Nucleic Acids Res. 34(Database issue)

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] A large-scale Self-Organizing Map (SOM) unveils sequence characteristics of a wide range of eukaryote genomes2006

    • Author(s)
      Abe, T., Sugawara, H., Kanaya, K., Kinouchi, M., Ikemura, T.
    • Journal Title

      Gene 365

      Pages: 27-34

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] Exploration, Grading of Possible Genes from 183 Bacterial Strains by a Common Protocol to Identification of New Genes: Gene Trek in Prokaryote Space (GTPS).2006

    • Author(s)
      Kosuge T, Abe T, Okido T, Tanaka N, Hirahata M, Maruyama Y, Mashima J, Tomiki A, Kurokawa M, Himeno R, Fukuchi S, Miyazaki S, Gojobori T, Tateno Y, Sugawara H
    • Journal Title

      DNA Res. 13(6)

      Pages: 245-54

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17019065
  • [Journal Article] DDBJ in collaboration with mass-sequencing teams on annotation.2005

    • Author(s)
      Tateno Y., Saitou N., Okubo K., Sugawara H., Gojobori T.
    • Journal Title

      Nucleic Acids Research 33

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] A complete set of Escherichia coli open reading frames in mobile plasmids facilitating genetic studies c2005

    • Author(s)
      Saka, K., Tadenuma, M., Nakade, S., Tanaka, N., Sugawara, H., Nishikawa, K., Ichiyoshi, N., Kitagawa, M., Mori, H., Ogasawara, N., Nishimura, A.
    • Journal Title

      DNA Res. 12

      Pages: 63-68

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] Novel Phylogenetic Studies of Genomic Sequence Fragments Derived from Uncultured Microbe Mixtures in Environmental and Clinical Samples.2005

    • Author(s)
      Abe T., Sugawara H., Kinouchi M., Kanaya S., Ikemura T.
    • Journal Title

      DNA Reserch 12

      Pages: 281-290

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] Splicing Profile-based Protein Categorization between Human and Mouse Genome by use of DDBJ Web Services.2004

    • Author(s)
      Vastermark, A., Shigemoto, Y., Abe, T., Sugawara, H.
    • Journal Title

      Genome Informatics 15

      Pages: 13-20

    • NAID

      130003997345

    • Data Source
      KAKENHI-PROJECT-16255006
  • [Journal Article] DBJ in the stream of various biological data.2004

    • Author(s)
      Miyazaki, S., Sugawara, H., Ikeo, K., Gojobori, T., Tateno.Y.
    • Journal Title

      Nucleic Acids Research 32

    • Data Source
      KAKENHI-PROJECT-16255006
  • 1.  GOJOBORI Takashi (50162136)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 8 results
  • 2.  IKEO Kazuho (20249949)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 1 results
  • 3.  TATENO Yoshio (00202424)
    # of Collaborated Projects: 3 results
    # of Collaborated Products: 5 results
  • 4.  SAITOU Naruya (30192587)
    # of Collaborated Projects: 3 results
    # of Collaborated Products: 1 results
  • 5.  NISHIKAWA Ken (10093288)
    # of Collaborated Projects: 3 results
    # of Collaborated Products: 1 results
  • 6.  MIYAZAKI Satoru (30290894)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 7.  SUZUKI Yoshiyuki (70353430)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 8.  ENDO Toshinori (00323692)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  MINETA Katsuhiko (40374615)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  OGURA Atsushi (60465929)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  IMANISHI Tadashi (80270461)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 12.  OKUBO Kosaku (40233069)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 13.  SUGIMOTO Chihiro (90231373)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 14.  INOUE Noboru (10271751)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  HATTORI Masahira (70175537)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 16.  ABE Takashi (30390628)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 17.  WATANABE Junichi (20201189)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 18.  Mizushima Noboru (10353434)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 19.  IWAI Kazuhiro (60252459)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 20.  UCHIYAMA Yasuo (10049091)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 21.  OHSUMI Yoshinori (30114416)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 22.  OHNO Hiroshi (50233226)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 23.  KOMINAMI Eiki (10035496)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 24.  TANAKA Keiji (10108871)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 25.  SATO Shigeto (00445537)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 26.  北上 始 (50234240)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 27.  小林 薫 (20225494)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 28.  磯野 克己 (70011640)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 29.  玄 学南 (10292096)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 30.  服部 雅一 (40211479)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 31.  斉木 臣二 (00339996)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 32.  野田 展生 (40396297)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 33.  吉森 保 (60191649)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 34.  小松 雅明 (90356254)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 35.  中戸川 仁 (90414010)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 36.  BRYANT Steve
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 37.  SIMON Eastea
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results

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