IKEO KAZUHO 池尾一穂

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IKEO Kazuho 池尾一穂

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Researcher Number	20249949
Other IDs
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Affiliation (Current)	2024: 国立遺伝学研究所, ゲノム・進化研究系, 准教授
Affiliation (based on the past Project Information) *help	2018 – 2023: 国立遺伝学研究所, ゲノム・進化研究系, 准教授 2012 – 2017: 国立遺伝学研究所, 生命情報研究センター, 准教授 2011: 国立遺伝学研究所, 生命情報・DDBJ研究センター, 准教授 2008 – 2009: National Institute of Genetics, 生命情報・DDBJ 研究センター, 准教授 2007 – 2009: National Institute of Genetics, Laboratory for Dna Data Analysis, Associate Professor … More 2008: 国立遺伝学研究所, 教授 2007: 国立遺伝学研究所, 生命情報DDBJ研究センター, 准教授 2007: National Institute of Genetics, Center for Information Biology and DNA Data Bank of Japan, Associate Professor 2004 – 2006: 国立遺伝学研究所, 生命情報・DDBJ研究センター, 助教授 2005: National Institute of Genetics Center for Information Biology and DNA Data Bank of Japan, Associate Professor, 生命情報DDBJ研究センター, 助教授 2004: National Institute of Genetics, Laboratory for Dna Data Analysis, Associate Professor, 生命情報・DDBJ, 助教授 2004: 国立遺伝学研究所, 生命情報・DDBJ, 助教授 2003: 国立遺伝学研究所, 助教授 2002: 国立遺伝学研究所, 生命情報・DDBJ研究センター, 助手 1998 – 2000: 国立遺伝学研究所, 生命情報センター, 助手 1995 – 2000: 国立遺伝学研究所, 生命情報研究センター, 助手 1992 – 1994: 国立遺伝学研究所, 遺伝情報研究センター, 助手 Less
Review Section/Research Field	Principal Investigator 遺伝 / Complex systems / 自然史科学 / Genome biology / Evolutionary biology / Genetics/Genome dynamics / Biological Sciences Except Principal Investigator 遺伝 / Complex systems / Basic Section 59040:Nutrition science and health science-related … More / Genetics/Genome dynamics / Applied genomics / Evolutionary biology / Evolutionary biology / Ophthalmology / Biological Sciences Less
Keywords	Principal Investigator 分子進化 / 比較ゲノム / ゲノム / 遺伝子発現 / 次世代シークエンス / 渦鞭毛虫 / 眼 / セリン・プロテアーゼ / ドメイン / クラスタリング … More / 細胞マーカー遺伝子 / 細胞系譜 / 単一細胞トランスクリプトーム解析 / 細胞社会モデル / 状態遷移マーカー遺伝子探索 / 炎症モデル構築 / 体細胞変異 / マーカー遺伝子探索 / データベース / 細胞系譜再構築 / NGSデータ解析 / 炎症細胞の遷移 / 単一細胞トランスクリプトーム / transcriptional factor / Biodiversity / development / eye / molecular evolution / PAX遺伝子 / SIX遺伝子 / ホメオボックス / 遺伝子重複 / プラナリア / 転写因子 / 根圏 / イネ / バイオインフォマティクス / 多様性 / 16ｓDNA / メタゲノム / NGS / オプシン遺伝子 / NGSシークエンサー / レンズ眼 / 感覚器 / クラゲ / ゲノム比較 / 眼の起源 / EST / 感覚器の起源 / 遺伝子ネットワーク / 渦べん毛虫 / バイオインフォマティックス / 進化遺伝 / 生物多様性 / ヒト特異的遺伝子 / FLcDNA / 神経系 / 分子系統樹 / クリングル / モザイク・プロテイン / クリングル構造 … More Except Principal Investigator DDBJ / データベース / GenBank / 分子進化 / DNA / EMBL / NCBI / 生命情報学 / ゲノム / 分子系統樹 / pigment cell / mouse / in situ hybridization / 聴覚 / 色素細胞 / マウス / ヒトゲノム / INSDB / molecular evolution / HIV / bioinformatics / Gen Bank / タンパク質 / 遺伝子 / 塩基配列 / 比較ゲノム / 遺伝子発現 / アノテーション / DNA配列 / セリンプロテアーゼ / アミノ酸配列 / 遺伝子機能 / サブタイプ / C型肝炎ウイルス / 情報工学 / 病理学 / 免疫学 / 脳 / 食 / 生活習慣 / 認知機能 / オミックス解析 / エピゲノム / バイオバンク / 健康長寿 / gene expression / visual sense / auditory sense / eye / inner ear / 視覚 / 眼 / 内耳 / comparative genomics / microRNA / human genome / sequence motif / マイクロRNA / 配列モチーフ / data standardization / human genes / evolutionary information / annotation / genome / biological database / International visit / 国際DNAデータバンク実務者会議 / 非タンパク質遺伝子 / チンパンジー染色体 / ヒト発現遺伝子 / イネゲノム / マイクロアレイデータ / Annotation / UniProt / DNA配列データベース / ヒト遺伝子 / 進化情報 / 多国籍 / 国際情報交換 / hearing loss / stria vascularis / cochlea / Hearing / coat color mutant / in situハイブリダイゼイション / サブトラクション / 内耳色素細胞 / 難聴 / 血管条 / 蝸牛 / 毛色変異体 / Human genome / sequencing / nucleotide sequence / MHC (major histocompatibility complex) / serine protease / Molecular Phylogenetic Tree / functional domain / prediction of gene function / シーケンシング / MHC / セリンフロテアーゼ / 機能的ドメイン / 遺伝子機能予測 / nucleotide substitution / subtype / phylogenetic tree / GB virus / hepatitis B virus / hepatitis C virus / 塩基置換 / 塩素置換 / 系統樹 / GBウイルス / B型肝炎ウイルス / 3-isopropylmalate dehydrogenase / cytochrome c oxidase / natural selection / viral evolution / evolutionary motif / protein 3D structure / molecular phylogeny / 蛋白質モデリング / グルタミン合成酵素 / 蛋白質高次構造 / 脱水素酵素 / チトクローム酸化酵素 / 正の自然選択 / ウイルス進化 / 進化モチーフ / タンパク質高次構造 / 分子系統 / EBI / protein / database / Molecular biology / Computer / Gene / Molecular evolution / Database / Databank / Nucleotide sequence / 国際共同構築 / 遺伝情報 / 生物情報学 / 国際DNAデータベース / コンピュータネットワーク / 分子生物学 / コンピュータ / データバンク / 哺乳類 / 進化 / 突然変異 / ムササビ / カピバラ / ゲノム解析 / ABO式血液型遺伝子 / 遺伝子変換 / 突然変異パターン / チベットモンキー / Rh式血液型遺伝子 / カニクイザル / 反復配列 / CNS / 霊長類 / ゲノム進化 / ゲノム医科学 / 包括的遺伝子発現 / 糖尿病網膜症 / 網膜前増殖組織 / 表現型 / 疾患情報モデル / 情報生物学 / 脳・神経系 / 疾患情報 / 遺伝子内領域 / 正の自然淘汰 / DNAデータベース / クリングル構造 / 立体構造 / モチーフ / マルチプル・アラインメント / 適応的進化 / オーバーラップ遺伝子 / 塩基置換速度 / 系統樹解析 / インフルエンザA型ウイルス / 病原性ウイルス / 非同義置換 / 同義置換 / 遺伝子機能の予測 / 起源と進化 / 成人T細胞白血病ウイルス Less

Preventive medicine through inflammation cellular sociology
- Principal Investigator
  
  松島綱治
- Project Period (FY)
  2022
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Tokyo University of Science
A proposal for "anti-dementia dietary habits" based on healthy longevity epigenomics that links dietary habits and cognitive function
- Principal Investigator
  
  田中佑治
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 59040:Nutrition science and health science-related
- Research Institution
  Tokyo Metropolitan Geriatric Hospital and Institute of Gerontology
  University of Yamanashi
Study of Information analysis and modelinigPrincipal Investigator
- Principal Investigator
  
  IKEO KAZUHO
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  National Institute of Genetics
Integrative study of nucleotide sequence evolution using primate genomes as model
- Principal Investigator
  
  SAITOU NARUYA
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Evolutionary biology
- Research Institution
  National Institute of Genetics
Plant genetic loci controlling rhizosphere microbial community compositionPrincipal Investigator
- Principal Investigator
  
  IKEO Kazuho
- Project Period (FY)
  2013 – 2014
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Genome biology
- Research Institution
  National Institute of Genetics
Evolution of Eye as sensory organPrincipal Investigator
- Principal Investigator
  
  IKEO KAZUHO
- Project Period (FY)
  2011 – 2013
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Evolutionary biology
- Research Institution
  National Institute of Genetics
Genomic study of preretinal fibrovascular membranes associated with proliferative diabetic retinopathy
- Principal Investigator
  
  ISHIBASHI Tatsuro
- Project Period (FY)
  2007 – 2008
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Ophthalmology
- Research Institution
  Kyushu University
The origin of Dinoflagellate lens-eye from DNA and morphologyPrincipal Investigator
- Principal Investigator
  
  IKEO Kazuho
- Project Period (FY)
  2007 – 2008
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Genetics/Genome dynamics
- Research Institution
  National Institute of Genetics
遺伝子発現比較による生物多様性の分子進化メカニズムの解明Principal Investigator
- Principal Investigator
  
  池尾一穂
- Project Period (FY)
  2005
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
An informatics approach to the systematic understanding of a model disease
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
Genetic analysis of the function and development of pigment cells essential for visual and auditory senses
- Principal Investigator
  
  YAMAMOTO Hiroaki
- Project Period (FY)
  2005 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Genetics/Genome dynamics
- Research Institution
  Tohoku University
Collection and Investigation into Basic Evolutionary Information by Orrsite Collaboration
- Principal Investigator
  
  TATENO Yoshio
- Project Period (FY)
  2004 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Evolutionary biology
- Research Institution
  National Institute of Genetics
Exploration of functional non-coding sequences in the higher eukaryotic genomes.
- Principal Investigator
  
  IMANISHI Tadashi
- Project Period (FY)
  2004 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Applied genomics
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Genetic analysis of the function and development of the inner ear pigment cells essential for hearing acuity.
- Principal Investigator
  
  YAMAMOTO Hiroaki
- Project Period (FY)
  2002 – 2004
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  遺伝
- Research Institution
  Tohoku University
Study on the DNA database and other biological databases
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  1998 – 2000
- Research Category
  
  Grant-in-Aid for Scientific Research (A).
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
Approach for the comparative study of gene expression patterns in brain development.Principal Investigator
- Principal Investigator
  
  IKEO Kazuho
- Project Period (FY)
  1998 – 1999
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  自然史科学
- Research Institution
  National Institute of Genetics
正の自然淘汰の働く遺伝子内領域の推定に基づく遺伝子機能とその変化の予測
- Principal Investigator
  
  五條堀孝
- Project Period (FY)
  1997
- Research Category
  
  Grant-in-Aid for Exploratory Research
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
アミノ酸配列のマルチプル・アラインメントからのモチーフの抽出と立体構造との対応
- Principal Investigator
  
  五條堀孝
- Project Period (FY)
  1995
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  National Institute of Genetics
Study on DNA and related bioinformatics databases
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  1995 – 1997
- Research Category
  
  Grant-in-Aid for international Scientific Research
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
Development of "Molecular Structural Phylogeny" on the Consideration of Protein 3D structure
- Principal Investigator
  
  TATENO Yoshio
- Project Period (FY)
  1995 – 1996
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
Elucidation of molecular evolutinary mechanisms of HIV and HCV
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  1995 – 1997
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
Prediction of gene functions by use of molecular evolutionary approach
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  1995 – 1997
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
モザイクタンパク質の進化と機能予測Principal Investigator
- Principal Investigator
  
  池尾一穂
- Project Period (FY)
  1994
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
病原性ウイルス遺伝子の系統樹解析と機能予測
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  1993 – 1994
- Research Category
  
  Grant-in-Aid for General Scientific Research (B)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
蛋白質のドメイン構造からみたプロテアーゼ遺伝子とインヒビター遺伝子の分子進化Principal Investigator
- Principal Investigator
  
  池尾一穂
- Project Period (FY)
  1993
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  遺伝
- Research Institution
  National Institute of Genetics
Study on the development of the DNA databank
- Principal Investigator
  
  GOJOBORI Takashi
- Project Period (FY)
  1992 – 1994
- Research Category
  
  Grant-in-Aid for international Scientific Research
- Research Institution
  National Institute of Genetics (NIG)

[Book] 実験医学2009
- Author(s)
  五條堀孝、金城その子、Jose C. Clemente、池尾一穂
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-17019065
[Book] Gene Expression in the brain and central nervous system in planarians. Planaria: A Model for Drug Action and Abuse, (Edited by Robert B. Raffa and Scott M. Rawls)2008
- Author(s)
  Mineta, K., Ikeo, K. and Gojobori, T.
- Total Pages
  150
- Publisher
  Landes Bioscience
- Data Source
  KAKENHI-PROJECT-19570007
[Book] マイクロアレイ遺伝子発現デーベース、『ゲノミクス・プロテオミクスの新展開〜生物情報の解析と応用』2004
- Author(s)
  池尾一穂, 舘野義男
- Total Pages
  9
- Publisher
  (株)エヌ・ティー・エス
- Data Source
  KAKENHI-PROJECT-16255006
[Book] 「マイクロアレイ遺伝子発現デーベース」, 『ゲノミクス・プロテオミクスの新展開〜生物情報の解析と応用』2004
- Author(s)
  池尾一穂
- Total Pages
  9
- Publisher
  (株)エヌ・ティー・エス
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16255006
[Book] 「マイクロアレイ遺伝子発現データベース」、『ゲノミクス・プロテオミクスの新展開-生物情報の解析と応用』.2004
- Author(s)
  Ikeo, K.
- Total Pages
  9
- Publisher
  NTS Inc.
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Blocking DCIR mitigates colitis and prevents colorectal tumors by enhancing the GM-CSF-STAT5 pathway2022
- Author(s)
  Sun Haiyang、Tang Ce、Chung Soo-Hyun、Ye Xiao-Qi、Makusheva Yulia、Han Wei、Kubo Masato、Shichino Shigeyuki、Ueha Satoshi、Matsushima Koji、Ikeo Kazuho、Asano Masahide、Iwakura Yoichiro
- Journal Title
  
  Cell Reports
  
  Volume: 40 Issue: 5 Pages: 111158-111158
- DOI
  10.1016/j.celrep.2022.111158
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22H05064, KAKENHI-PROJECT-20H03176, KAKENHI-PROJECT-20H03474, KAKENHI-WRAPUP-22H04906
[Journal Article] Real-Time Course: Reconstruction of cellular diversity and lineage trajectory based on somatic mutational patterns detected from low-pass single-cell transcriptome data2022
- Author(s)
  1.Satoshi Oota*, Kuniya Abe, Hideo Yokota, Kazuho Ikeo.
- Journal Title
  
  Research Square
  
  Volume: なし Pages: 1-22
- DOI
  10.21203/rs.3.rs-1558242/v1
- Open Access
- Data Source
  KAKENHI-PLANNED-17H06399
[Journal Article] TAS-Seq is a robust and sensitive amplification method for bead-based scRNA-seq.2022
- Author(s)
  Shichino S, Ueha S, Hashimoto S, Ogawa T, Aoki H, Wu B, Chen CY, Kitabatake M, Ouji-Sageshima N, Sawabata N, Kawaguchi T, Okayama T, Sugihara E, Hontsu S, Ito T, Iwata Y, Wada T, Ikeo K, Sato TA, Matsushima K.
- Journal Title
  
  Commun Biol
  
  Volume: 5 Issue: 1 Pages: 602-602
- DOI
  10.1038/s42003-022-03536-0
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K08162, KAKENHI-PROJECT-21K08224, KAKENHI-PROJECT-22K07179, KAKENHI-PROJECT-20H03474, KAKENHI-WRAPUP-22H04906
[Journal Article] Collagen adhesion gene is associated with bloodstream infections caused by methicillin-resistant Staphylococcus aureus.2020
- Author(s)
  Iwata Y, Satou K, Furuichi K, Yoneda I, Matsumura T, et al.
- Journal Title
  
  Int J Infect Dis.
  
  Volume: 91 Pages: 22-31
- DOI
  10.1016/j.ijid.2019.11.003
- NAID
  120006842044
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K07107, KAKENHI-PROJECT-18K08426, KAKENHI-PLANNED-17H06394, KAKENHI-PLANNED-17H06399, KAKENHI-PROJECT-17K09691, KAKENHI-ORGANIZER-17H06391, KAKENHI-PLANNED-17H06392
[Journal Article] DOCK11 and DENND2A play pivotal roles in the maintenance of hepatitis B virus in host cells.2020
- Author(s)
  Hashimoto S, Shirasaki T, Yamashita T, Iwabuchi S, Suzuki Y, Takamura Y, Ukita Y, Deshimaru S, Okayama T, Ikeo K, Kuroki K, Kawaguchi K, Mizukoshi E, Matsushima K, Honda M, Kaneko S
- Journal Title
  
  PLoS One
  
  Volume: 16(2) Issue: 2 Pages: e0246313-e0246313
- DOI
  10.1371/journal.pone.0246313
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06399, KAKENHI-PROJECT-18H02793, KAKENHI-PROJECT-21K07940
[Journal Article] The increased frequency of methicillin-resistant Staphylococcus aureus with low MIC of beta-lactam antibiotics isolated from hospitalized patients2020
- Author(s)
  Iwata Y、Sakai N、Yoneda I、Satou K、Furuichi K、Senda Y、Sakai-Takemori Y、Wada T、Fujita S、Ogura H、Sato K、Minami T、Yamaguchi K、Kitajima S、Toyama T、Yamamura Y、Miyagawa T、Hara A、Shimizu M、Sakai Y、Ikeo K、Shichino S、Ueha S、Nakajima T、Matsushima K、Wada T
- Journal Title
  
  Journal of Infection and Chemotherapy
  
  Volume: 26 Issue: 6 Pages: 604-610
- DOI
  10.1016/j.jiac.2020.01.016
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06392, KAKENHI-PLANNED-17H06399, KAKENHI-ORGANIZER-17H06391, KAKENHI-PLANNED-17H06394, KAKENHI-PROJECT-20K08605
[Journal Article] Clonal analysis revealed functional heterogeneity in cancer stem-like cell phenotypes in uterine endometrioid adenocarcinoma.2019
- Author(s)
  Tabuchi Y, Hirohashi Y, Hashimoto S, Mariya T, Asano T, Ikeo K, Kuroda T, Mizuuchi M, Murai A, Uno S, Kawai N, Kubo T, Nakatsugawa M, Kanaseki T, Tsukahara T, Saito T, Torigoe T.
- Journal Title
  
  Exp Mol Pathol
  
  Volume: 106 Pages: 78-88
- DOI
  10.1016/j.yexmp.2018.11.013
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K11285, KAKENHI-PLANNED-17H06399, KAKENHI-PROJECT-16H05451, KAKENHI-ORGANIZER-17H06391, KAKENHI-PROJECT-17H01540
[Journal Article] Specific features of fibrotic lung fibroblasts highly sensitive to fibrotic processes mediated via TGF-β-ERK5 interaction.2019
- Author(s)
  Kadoya K, Togo S, Tulafu M, Namba Y, Iwai M, Watanabe J, Okabe T, Jin J, Kodama Y, Kitamura H, Ogura T, Kitamura N, Ikeo K, Takeda T, Kondo N, Takahashi K.
- Journal Title
  
  Cell Physiol Biochem
  
  Volume: 52 Issue: 4 Pages: 822-837
- DOI
  10.33594/000000057
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K10653, KAKENHI-PLANNED-17H06399
[Journal Article] The reduction of miR146b-5p in monocytes and T cells could contribute to the immunopathogenesis of hepatitis C virus infection2019
- Author(s)
  Kondo Yasuteru、Kogure Takayuki、Ninomiya Masashi、Fukuda Ryo、Monma Norikazu、Ikeo Kazuho、Tanaka Yasuhito
- Journal Title
  
  Scientific Reports
  
  Volume: 9 Issue: 1 Pages: 13393-13393
- DOI
  10.1038/s41598-019-49706-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K08374, KAKENHI-PLANNED-17H06399
[Journal Article] Maser: one-stop platform for NGS big data from analysis to visualization.2018
- Author(s)
  Kinjo S, Monma N, Misu S, Kitamura N, Imoto J, Yoshitake K, Gojobori T, Ikeo K.
- Journal Title
  
  Database (Oxford).
  
  Volume: 2018 Pages: 1-12
- DOI
  10.1093/database/bay027
- Open Access
- Data Source
  KAKENHI-PLANNED-17H06399
[Journal Article] Efficient screening of long terminal repeat retrotransposons that show high insertion polymorphism via high-throughput sequencing of the primer binding site.2014
- Author(s)
  Monden Y, Fujii N, Yamaguchi K, Ikeo K, Nakazawa Y, Waki T, Hirashima K, Uchimura Y, Tahara M.
- Journal Title
  
  Genome
  
  Volume: 57（5） Issue: 5 Pages: 245-52
- DOI
  10.1139/gen-2014-0031
- NAID
  120005468263
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-25640103
[Journal Article] Autosomal recessive cone-rod dystrophy associated with compound heterozygous mutations in the EYS gene.2014
- Author(s)
  Katagiri S, Akahori M, Hayashi T, Yoshitake K, Gekka T, Ikeo K, Tsuneoka H, Iwata T.
- Journal Title
  
  Doc Ophthalmol.
  
  Volume: 128(3) Issue: 3 Pages: 211-217
- DOI
  10.1007/s10633-014-9435-0
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098, KAKENHI-PROJECT-25462738, KAKENHI-PROJECT-25462744
[Journal Article] Autosomal recessive cone-rod dystrophy associated with compound heterozygous mutations in the EYS gene2014
- Author(s)
  Katagiri S, Akahori M, Hayashi T, Yoshitake K, Gekka T, Ikeo K, Tsuneoka H, Iwata T
- Journal Title
  
  Doc Ophthalmol
  
  Volume: 128(3) Pages: 211-7
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098
[Journal Article] Longitudinal clinical course of three Japanese patients with Leber congenital amaurosis/early-onset retinal dystrophy with RDH12 mutation2014
- Author(s)
  Kuniyoshi K, Sakuramoto H, Yoshitake K, Abe K, Ikeo K, Furuno M, Tsunoda K, Kusaka S, Shimomura Y, Iwata T
- Journal Title
  
  Doc Ophthalmol
  
  Volume: 128(3) Pages: 219-28
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098
[Journal Article] Human genome network platform: a resource for TFRN analysis.2014
- Author(s)
  Monma N, Gojobori T, Ikeo K.
- Journal Title
  
  Methods Mol Biol
  
  Volume: 1164 Pages: 147-62
- DOI
  10.1007/978-1-4939-0805-9_12
- ISBN
  9781493908042, 9781493908059
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-25640103
[Journal Article] Comparison of gene expression profile of epiretinal membranes obtained from eyes with proliferative vitreoretinopathy to that of secondary epiretinal membranes2013
- Author(s)
  Asato R, Yoshida S, Ogura A, Nakama T, Ishikawa K, Nakao S, Sassa Y, Enaida H, Oshima Y, Ikeo K, Gojobori T, Kono T, Ishibashi T
- Journal Title
  
  PLoS One
  
  Volume: 8(1)
- NAID
  120005227330
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098
[Journal Article] Whole-exome sequencing identifies a novel ALMS1 mutation (p.Q2051X) in two Japanese brothers with Alströ m syndrome2013
- Author(s)
  Katagiri S, Yoshitake K, Akahori M, Hayashi T, Furuno M, Nishino J, Ikeo K, Tsuneoka H, Iwata T
- Journal Title
  
  Mol Vis
  
  Volume: 19 Pages: 2393-406
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098
[Journal Article] Comparison of gene expression profile of epiretinal membranes obtained from eyes with proliferative vitreoretinopathy to that of secondary epiretinal membranes2013
- Author(s)
  Asato R, et. al.
- Journal Title
  
  PLoS One.
  
  Volume: 8 Issue: 1 Pages: e54191-e54191
- DOI
  10.1371/journal.pone.0054191
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-11J00140, KAKENHI-PROJECT-23370098, KAKENHI-PROJECT-23592574
[Journal Article] Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna.2013
- Author(s)
  Nakamura Y, Mori K, Saitoh K, Oshima K, Mekuchi M, Sugaya T, Shigenobu Y, Ojima N, Muta S, Fujiwara A, Yasuike M, Oohara I, Hirakawa H, Chowdhury VS, Kobayashi T, Nakajima K, Sano M, Wada T, Tashiro K, Ikeo K, Hattori M, Kuhara S, Gojobori T, Inouye K.
- Journal Title
  
  Proc Natl Acad Sci U S A.
  
  Volume: 110(27) Issue: 27 Pages: 11061-11066
- DOI
  10.1073/pnas.1302051110
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098
[Journal Article] A new database (GCD) on genome composition for eukaryote and prokaryote genome sequences and their initial analyses2012
- Author(s)
  Kirill Kryukov
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 4 Issue: 4 Pages: 501-512
- DOI
  10.1093/gbe/evs026
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22570218, KAKENHI-PROJECT-23370098
[Journal Article] Effective gene collection from the metatranscriptome of marine microorganisms2011
- Author(s)
  Ogura A, Lin M, Shigenobu Y, Fujiwara A, Ikeo K, Nagai S
- Journal Title
  
  BMC Genomics
  
  Volume: 12 Suppl 3 Issue: Suppl 3 Pages: S15-S15
- DOI
  10.1186/1471-2164-12-s3-s15
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098
[Journal Article] Evolutionary patterns of recently emerged animal duplogs2011
- Author(s)
  Ezawa K, Ikeo K, Gojobori T, Saitou N
- Journal Title
  
  Genome Biol Evol
  
  Volume: 3 Pages: 1119-35
- DOI
  10.1093/gbe/evr074
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370098
[Journal Article] Expression Profile of Fibrovascular Membranes from Patients with Proliferative Diabetic Retinopathy.2010
- Author(s)
  Yoshida, S., Ogura, A., Ishikawa, K., Yoshida, A., Kohno, R., Yamaji, Y., Ikeo, K., Gojobori, T., Kono, T., Ishibashi, T. Gene
- Journal Title
  
  Br J Ophthalmol (In press)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Specific expression of Gsta4 in mouse cochlear melanocytes: a novel role for hearing, melanocyte differentiation.2009
- Author(s)
  Uehara S, Izumi Y, Kubo Y, Wang C. C, Mineta K, Ikeo K, Gojobori T, Tachibana M, Kikuchi T, Kobayashi T, Shibahara S, Taya C, Yonekawa H, Shiroishi T, Yamamoto H.
- Journal Title
  
  Pigment Cell Melanoma Res. 22(1)
  
  Pages: 111-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Optimized ancestral state reconstruction using Sankoff parsimony2009
- Author(s)
  Clemente, JC., Ikeo, K., Valiente, G., Gojobori, T.
- Journal Title
  
  BMC Bioinformatics Feb 7;10:51
  
  Pages: 10-51
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] The transcriptional network that controls growth arrest, differentiation in a human myeloid leukemia cell line.2009
- Author(s)
  The FANTOM Consortium, RIKEN Omics Science Center, Suzuki, H., Gojobori, T., Ikeo, K., Sera, M., Kawai, J., et al
- Journal Title
  
  Nature Genetics 41(5)
  
  Pages: 553-62
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] The evolutionary relationship between gene duplication, alternative splicing.2008
- Author(s)
  Jin L, Kryukov K, Clemente J. C, Komiyama T, Suzuki Y, Imanishi T, Ikeo K, Gojobori T.
- Journal Title
  
  Gene. 427(1-2)
  
  Pages: 19-31
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Insertional mutagenesis by the Tol2 transposon-mediated enhancer trap approach generated mutations in two developmental genes: tcf7 and synembryn-like2008
- Author(s)
  Nagayoshi, S., Ikeo, K., et. Al.
- Journal Title
  
  Development Jan;135(1)
  
  Pages: 159-169
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] Cilium evolution: identification of a novel protein, nematocilin, in the mechanosensory cilium of Hydra nematocytes2008
- Author(s)
  Hwang, JS., Takaku, Y., Chapman, J., Ikeo, K., David, CN. And Gojobori, T.
- Journal Title
  
  Mol. Biol. Evol. 25(9)
  
  Pages: 2009-2017
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] Evola: Ortholog Database of all human genes in H-InvDB with manual curation of phylogenetic trees2008
- Author(s)
  Matsuya, A., Ikeo, K., et. Al.
- Journal Title
  
  Nucleic Acids Res. Jan;36 (Database issue)
  
  Pages: 787-792
- NAID
  120004667178
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees.2008
- Author(s)
  Matsuya A, Sakate R, Kawahara Y, Koyanagi KO, Sato Y, Fujii Y, Yamasaki C, Habara T, Nakaoka H, Todokoro F, Yamaguchi K, Endo T, OOta S, Makalowski W, Ikeo K, Suzuki Y, Hanada K, Hashimoto K, Hirai M, Iwama H, Saitou N, Hiraki AT, Jin H, Kaneko Y, Kanno M, Murakami K, Noda AO, Saichi N, Sanbonmatsu R, Suzuki M, Takeda J, Tanaka M, Gojobori T, Imanishi T, and Itoh T. Evola
- Journal Title
  
  Nucleic Acids Res. 36
  
  Pages: 787-792
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Evolutionary origin of the vertebrate blood complement and coagulation systems inferred from liver EST analysis of lamprey2008
- Author(s)
  Kimura, A., Ikeo, K., Nonaka, M.
- Journal Title
  
  Dev Comp Immunol 33
  
  Pages: 77-87
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] The evolutionary relationship between gene duplication and alternative splicing2008
- Author(s)
  Jin, L., Ikeo, K., et. Al.
- Journal Title
  
  Gene Dec 31;427(1-2)
  
  Pages: 19-31
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] identification of a novel protein, nematocilin, in the mechanosensory cilium of Hydra nematocytes.2008
- Author(s)
  Hwang J. S, Takaku Y, Chapman J, Ikeo K, David C. N, Gojobori T
- Journal Title
  
  Mol. Biol. Evol. 25
  
  Pages: 2009-2017
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] web-based interactive developmental table for the ascidian Ciona intestinalis, including 3D real-image embryo reconstructions: I. From fertilized egg to hatching larva.2007
- Author(s)
  Hotta K, Mitsuhara K, Takahashi H, Inaba K, Oka K, Gojobori T, Ikeo K. A
- Journal Title
  
  Dev. Dyn 236(7)
  
  Pages: 1790-1805
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] The evolutionary emergence of cell type-specific genes inferred from the gene expression analysis of Hydra2007
- Author(s)
  Hwang, JS., Ikeo, K., et. Al.
- Journal Title
  
  Proc Natl Acad Sci USA 11;107(37)
  
  Pages: 14735-14740
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] Evolutionary origin of sex-related genes in the mouse brain.2007
- Author(s)
  Yuge K, Ikeo K, Gojobori T
- Journal Title
  
  Gene 406(1-2)
  
  Pages: 18-112
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Compensatory Change of Interacting Amino Acids in the Coevolution of Transcriptional Coactivator MBF1, TATA-Box Binding Protein TBP.2007
- Author(s)
  Liu QX, Nakashima-Kamimura N, Ikeo K, Hirose S, Gojobori T
- Journal Title
  
  Mol. Biol. Evol. 24(7)
  
  Pages: 1458-1463
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Transcriptional interferences in cis natural antisense transcripts of humans and mice2007
- Author(s)
  Osato, N. Suzuki, Y. Ikeo, K. And Gojobori, T.
- Journal Title
  
  Genetics 176(2)
  
  Pages: 1299-1306
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] Transcriptional interferences in cis natural antisense transcripts of human, mouse.2007
- Author(s)
  Osato N, Suzuki Y, Ikeo K, Gojobori T
- Journal Title
  
  Genetics. 176
  
  Pages: 1299-1306
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] A Web-Based Interactive Developmental Table for the Ascidian Ciona intestinalis, Including 3D Real-Image Embryo Reconstructions: I. From Fertilized Egg to Hatching Larva2007
- Author(s)
  Hotta, K., Mitsuhara, Kenta., Takahashi, H., Inaba, K., Oka, K., Gojobori, T., Ikeo, K.
- Journal Title
  
  Developmental Dynamics 236
  
  Pages: 1790-1805
- Data Source
  KAKENHI-PROJECT-19570007
[Journal Article] The evolutionary emergence of cell type specific genes inferred from the gene expression analysis of hydra.2007
- Author(s)
  Jung Shan H, Ohyanagi H, Hayakawa S, Osato N, Nishimiya-Fujisawa C, Ikeo K, David C, Fujisawa T, Gojobori T
- Journal Title
  
  Proc. Natl. Acad. Sci. USA. 104(37)
  
  Pages: 14735-14740
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Comparative genome analyses of nervous system-specific genes.2006
- Author(s)
  Noda AO, Ikeo K, Gojobori T.
- Journal Title
  
  Gene Jan 3;365
  
  Pages: 130-136
- Data Source
  KAKENHI-PROJECT-17018035
[Journal Article] Molecular characterization of the developmental gene in eyes: Through data-mining on integrated transcriptome databases.2006
- Author(s)
  Choy KW, Wang CC, Ogura A, Lau TK, Rogers MS, Ikeo K, Gojobori T. Tang, LY., Lam, DS., Chung, TK. Pang, CP.
- Journal Title
  
  Clin. Biochem. 39(3)
  
  Pages: 224-230
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Molecular characterization of the developmental gene in eyes : Through data-mining on integrated transcriptome databases2006
- Author(s)
  Choy, KW, Wang, CC, Ogura, A, Lau, TK, Rogers, MS, Ikeo, K, Gojobori, T, Tang, LY, Lam, DS, Chung, TK, Pang, CP
- Journal Title
  
  Clin. Biochem. 34(Web Server issue)
  
  Pages: 224-230
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] The Rice Annotation Project Database(RAP-DB) : Hub for Oryza sativa ssp. japonica genome information.2006
- Author(s)
  Ohyanagi, H, Tanaka, T, Sakai, H, Shigemoto, Y, Yamaguchi, K, Habara, T, Fujii, Y, Antonio, B, Nagamura, Y, Imanishi, T, Ikeo, K, Ito, T, Gojobori, T, Sakaki, T
- Journal Title
  
  Nucleic Acids Res. 25(1)
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Genomic annotation of 15,809 ESTs identified from pooled early gestation hman eyes2006
- Author(s)
  Choy, KW, Wang, CC, Ogura, A, Lau, TK, Rogers, MS, Ikeo, K, Gojobori, T, Lam, DS, Pang, CP.
- Journal Title
  
  Physiol. Genomics 39(3)
  
  Pages: 9-15
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] magp4 gene may contribute to the diversification of cichlid morphs, their speciation.2006
- Author(s)
  Kobayashi N, Watanabe M, Kijimoto T, Fujimura K, Nakazawa M, Ikeo K, Kohara Y, Gojobori T, Okada N
- Journal Title
  
  Gene 373
  
  Pages: 126-133
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Evolution of metabolic networks by gain, loss of enzymatic in eukaryotes.2006
- Author(s)
  Tanaka T, Ikeo K, Gojobori T
- Journal Title
  
  Gene 365
  
  Pages: 88-94
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Evolution metabolic networks by gain and loss of enzymatic in eukaryotes.2006
- Author(s)
  Tanaka, T, Ikeo, K, Gojobori T.
- Journal Title
  
  GENE 365C
  
  Pages: 88-94
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Degeneration after sexual differentiation in hydra, its relevance to the evolution of aging2006
- Author(s)
  Yoshida K, Fujisawa T, Jung Shan H, Ikeo K, Gojobori T
- Journal Title
  
  Gene 385
  
  Pages: 64-70
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Evolution of metabolic networks by gain and loss of enzymatic reaction in eukaryotes.2006
- Author(s)
  Tanaka T, Ikeo K, Gojobori T.
- Journal Title
  
  Gene Jan 3;365C
  
  Pages: 88-94
- Data Source
  KAKENHI-PROJECT-17018035
[Journal Article] Comparative genome analyses of nervous system-specific genes.2006
- Author(s)
  Noda AO, Ikeo K,, Gojobori T
- Journal Title
  
  Gene 365
  
  Pages: 130-136
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Molecular characterization of the developmental gene in eyes : through data-mining on integrated transcriptome databases. Clin Biochem. 2006 Mar;39(3) : 224-30. Epub 2006 Jan 19.2006
- Author(s)
  Choy KW, Wang CC, Ogura A, Lau TK, Rogers MS, Ikeo K, Gojobori T, Tang LY, Lam DS, Chung TK, Pang CP
- Journal Title
  
  Clin Biochem 39(3)
  
  Pages: 224-230
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] Molecular characterization of the developmental gene in eyes : through data-mining on integratedtranscriptome databases.2006
- Author(s)
  Choy KW, Wang CC, Ogura A, Lau TK, Rogers MS, Ikeo K, Gojobori T, Tang LY, Lam DS, Chung TK, Pang CP
- Journal Title
  
  Clin Biochem. 39(3)
  
  Pages: 224-30
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] Genomic annotation of 15, 809 ESTs identified from pooled early gestation human eyes.2006
- Author(s)
  Choy KW, Wang CC, Ogura A, Lau TK, Rogers MS, Ikeo K, Gojobori T. Lam, DS., Pang, CP.
- Journal Title
  
  Phys 25(1)
  
  Pages: 9-15
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17019065
[Journal Article] Estimation of ancestral gene set of bilaterian animals and its implication to dynamic change of gene content in bilaterian evolution.2005
- Author(s)
  Ogura A, Ikeo K, Gojobori T.
- Journal Title
  
  Gene. Jan 17;345(1)
  
  Pages: 65-71
- Data Source
  KAKENHI-PROJECT-17018035
[Journal Article] Development of a spot reliability evaluation score for DNA microarrays.2005
- Author(s)
  Matsumura Y, Shimokawa K, Hayashizaki Y, Ikeo K, Tateno Y, Kawai J.
- Journal Title
  
  Gene. May 9;350(2)
  
  Pages: 149-160
- Data Source
  KAKENHI-PROJECT-17018035
[Journal Article] Genomic annotation of 15,809 ESTs identified from pooled early gestation human eyes.2005
- Author(s)
  Choy KW, Wang CC, Ogura A, Lau TK, Rogers MS, Ikeo K, Gojobori T, Lam DS, Pang CP
- Journal Title
  
  Physiol Genomics 25(1)
  
  Pages: 9-15
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] The Human Anatomic Gene Expression Library (H-Angel), the H-Invintegrative display of human gene expression across disparate technologies and platforms.2005
- Author(s)
  Tanino, M., Debily, M.-A-., Tamura, T., Hishiki, T., Ogasawara, O., Murakawa, K., Kawamoto, S., Itoh K., Watanabe, S., Souza, S.J.d., Imbeaud, S., Graucens, E., Eveno, E., Hilton, P., Sudo, Y., Kelso, J., Ikeo, K., Imanishi, T., Gojobori, T., Auffray, C., Hide, W., Okubo, K.
- Journal Title
  
  Nucleic Acids Res. 33
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms.2005
- Author(s)
  Tanino, M., Debily, MA., Tamura, T., Hishiki, T., Ogasawara, O., Murakawa, K., Kawamoto, S., Itoh, K., Watanabe, S., de Souza, SJ., Imbeaud, S., Graudens, E.Eveno, E., Hilton, P., Sudo, Y., Kelso, J., Ikeo, K., Imanishi, T., Gojobori, T., Auffray, C., Hide, W., Okubo, K.
- Journal Title
  
  Nucleic Acids Res. 33
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Genomic annotation of 15,809 ESTs identified from pooled early gestation human eyes.2005
- Author(s)
  Choy KW, Wang CC, Ogura A, Lau TK, Rogers MS, Ikeo K, Gojobori T, Lam DS, Pang CP
- Journal Title
  
  Physiol Genomics. 25(1)
  
  Pages: 9-15
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] The transcriptional landscape of the mammalian genome.2005
- Author(s)
  The FANTOM Consortium : Carninci, P., Gojobori, T., Ikeo, K., other 157 authors, Hume, D.A., Riken Genome Exploration Research Group, Genome Science Group.(Genome Network Project Core Group) : Kai, C., other 31 authors, Hayashizaki, Y.
- Journal Title
  
  Science 309
  
  Pages: 1559-1563
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Development of a spot evaluation score for DNA microarrays.2005
- Author(s)
  Matsumura, Y., Shimokawa, K., Hayashizaki, Y., Ikeo, K., Tateno, Y., Kawai, J.
- Journal Title
  
  Gene 350
  
  Pages: 149-160
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Asc12/Mash2-Igf2-H19-region.2005
- Author(s)
  Yokomine T, Shirohzu H, Purbowasito W, Toyoda A, Iwama H, Ikeo K, Hori T, Mizuno S, Tsudzuki M, Matsuda Y, Hattori M, Sakaki Y, Sasaki H.
- Journal Title
  
  Genome Res. 15(1)
  
  Pages: 154-165
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Ascl2/Mash2-Igf2-H19 region.2005
- Author(s)
  Yokomine T, Shirohzu H, Purbowasito W, Toyoda A, Iwama H, Ikeo K, Hori T, Mizuno S, Tsudzuki M, Matsuda Y, Hattori M, Sakaki Y, Sasaki H.
- Journal Title
  
  Genome Research 15(1)
  
  Pages: 154-165
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Molecular hierarchy in neurons differentiated from mouse ES cells containing a single human chromosome 21.2004
- Author(s)
  Wang CC, Kadota M, Nishigaki R, Kazuki Y, Shirayoshi Y, Rogers MS, Gojobori T, Ikeo K, Oshimura M
- Journal Title
  
  Biochem Biophys Res Commun 314(2)
  
  Pages: 335-350
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] The evolutionary origin of long-crowing chicken : its evolutionary relationship with fighting cocks disclosed by the mtDNA sequence analysis.2004
- Author(s)
  Komiyama, T., Ikeo, K., Gojobori, T.
- Journal Title
  
  GENE 333
  
  Pages: 91-99
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Pigment cell lineage-specific expression activity of the ascidian tyrosinase-related gene.2004
- Author(s)
  Toyoda, R., -Ikeo, K., Gojobori, T., -Yamamoto, H.
- Journal Title
  
  Gene 332
  
  Pages: 61-69
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-14340236
[Journal Article] Molecular hierarchy in neurons differentiated from mouse ES cells containing a single human chromosome 21.2004
- Author(s)
  Wang CC, Kadota M, Nishigaki R, Kazuki Y, Shirayoshi Y, Rogers MS, Gojobori T, Ikeo K, Oshimura M
- Journal Title
  
  Biochem Biophys Res Commun. 314(2)
  
  Pages: 335-50
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] Proteomic signatures and aberrations of mouse embryonic stem cells containing a single human chromosome 21 in neuronal differentiation : an in vitro model of Down syndrome.2004
- Author(s)
  Kadota M, Nishigaki R, Wang CC, Toda T, Shirayoshi Y, Inoue T, Gojobori T, Ikeo K, Rogers MS, Oshimura M
- Journal Title
  
  Neuroscience. 129(2)
  
  Pages: 325-35
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] Evolutionary process of the amino acids biosynthesis in Corynebacterium at the whole qenome level.2004
- Author(s)
  Nishio, Y., Nakamura, Y., Usuda, Y., Sugimoto, S., Matsui, K., Kawarabayashi, Y., Kikuchi, H., Gojobori, T., Ikeo, K.
- Journal Title
  
  Molecular Biology and Evolution 21
  
  Pages: 1683-1691
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Japanese domesticated chickens have been drived from Shamo, traditional fighting cocks.2004
- Author(s)
  Komiyama, T., Ikeo, K., Tateno, Y., Gojobori, T.
- Journal Title
  
  Molecular Phylogeny and Evolution 33
  
  Pages: 16-21
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Pigment cell lineage-specific expression activity of the ascidian tyrosinase-related gene.2004
- Author(s)
  Toyoda, R., Kasai, A., Sato, S., Wada, S., Saiga, H., Ikeo, K., Gojobori, T., Numakunai, T., Yamamoto, H.
- Journal Title
  
  Gene 332
  
  Pages: 61-69
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-14340236
[Journal Article] DBJ in the stream of various biological data.2004
- Author(s)
  Miyazaki, S., Sugawara, H., Ikeo, K., Gojobori, T., Tateno.Y.
- Journal Title
  
  Nucleic Acids Research 32
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Comparative analysis of gene expression for convergent evolution of camera eye between octopus and human.2004
- Author(s)
  Ogura, A., Ikeo, K., Gojobori, T.
- Journal Title
  
  Genome Research 14
  
  Pages: 1555-1561
- Data Source
  KAKENHI-PROJECT-16255006
[Journal Article] Pigment cell lineage-specific expression activity of the ascidian tyrosinase-related gene.2004
- Author(s)
  Toyoda, R., ---Ikeo, K., Gojobori, T., ---Yamamoto, H.
- Journal Title
  
  Gene 332
  
  Pages: 61-69
- Data Source
  KAKENHI-PROJECT-14340236
[Journal Article] Proteomic signatures and aberrations of mouse embryonic stem cells containing a single human chromosome 21' in neuronal differentiation : an in vitro model of Down syndrome.2004
- Author(s)
  Kadota M, Nishigaki R, Wang CC, Toda T, Shirayoshi Y, Inoue T, Gojobori T, Ikeo K, Rogers MS, Oshimura M
- Journal Title
  
  Neuroscience 129(2)
  
  Pages: 325-335
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Journal Article] Cloning and functional analysis of ascidian Mitf in vivo : insights into the origin of vertebrate pigment cells.2003
- Author(s)
  Yajima I., Endo K., Sato S., Toyoda R., Wada H., Shibahara S., Numakunai T., Ikeo K., Gojobori T., Goding C.R., Yamamoto H.
- Journal Title
  
  Mech.Dev. 120
  
  Pages: 1489-1504
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-14340236
[Journal Article] Cloning and functional analysis of ascidian Mitf in vivo : insights into the origin of vertebrate pigment cells.2003
- Author(s)
  Yajima I., ---Ikeo K., Gojobori T., Goding C.R., Yamamoto H.
- Journal Title
  
  Mech.Dev. 120
  
  Pages: 1489-1504
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-14340236
[Patent] 機能性RNAが制御するターゲットmRNAの予測・同定方法及びその利用方法2005
- Inventor(s)
  今西規, ロベルトAバレロ, 五條堀孝, 池尾一穂, 田村卓郎
- Industrial Property Number
  2005-272918
- Filing Date
  2005-09-20
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16310142
[Presentation] Reconstruction of cell lineage trees by using single-cell RNA sequence data2021
- Author(s)
  池尾一穂
- Organizer
  Genome Concept Centennial Conference（国立遺伝学研究所国際研究集会）
- Data Source
  KAKENHI-PLANNED-17H06399
[Presentation] Gene duplication and diversity of species.2012
- Author(s)
  Kazuho Ikeo
- Organizer
  日本地球惑星科学連合2012年度連合大会
- Place of Presentation
  幕張メッセ(千葉）
- Invited
- Data Source
  KAKENHI-PROJECT-23370098
[Presentation] Computational Tools for NGS Data Analysis2012
- Author(s)
  Kazuho Ikeo
- Organizer
  Next Generation Sequencing Asia Congress
- Place of Presentation
  Singapore
- Invited
- Data Source
  KAKENHI-PROJECT-23370098
[Presentation] Genome wide data analysis by using NGS2011
- Author(s)
  Kazuho Ikeo
- Organizer
  SMBE2011
- Place of Presentation
  Kyoto(招待講演)
- Year and Date
  2011-07-28
- Data Source
  KAKENHI-PROJECT-23370098
[Presentation] Genome wide data analysis by using NGS2011
- Author(s)
  Kazuho Ikeo
- Organizer
  Next Generation Sequencing Asia Congress
- Place of Presentation
  Singapore(招待講演)
- Year and Date
  2011-10-04
- Data Source
  KAKENHI-PROJECT-23370098
[Presentation] Transcriptome analysis by using large scale sequencing2011
- Author(s)
  Kazuho Ikeo
- Organizer
  Bioinformatics Symposium
- Place of Presentation
  Korea(招待講演)
- Year and Date
  2011-05-13
- Data Source
  KAKENHI-PROJECT-23370098
[Presentation] Comparative analysis of gene expression for convergent evolution of camera eye between octopus and human2011
- Author(s)
  Kazuho Ikeo
- Organizer
  Genomic Conversation and Diversity of Organisms
- Place of Presentation
  Taiwan(招待講演)
- Year and Date
  2011-12-10
- Data Source
  KAKENHI-PROJECT-23370098
[Presentation] 生物進化における遺伝子重複と多様性2011
- Author(s)
  Kazuho Ikeo
- Organizer
  第6回地文台シンポジウム&東工大流動機構国際ワークショップ
- Place of Presentation
  東京工業大学(東京都)(招待講演)
- Year and Date
  2011-11-01
- Data Source
  KAKENHI-PROJECT-23370098
[Presentation] Search for the evolutionary origin of protozoan lens-eye2008
- Author(s)
  Hayakawa, S., Ikeo, K., et.al.
- Organizer
  The 12th Conference of Peace through Mind Brain
- Place of Presentation
  静岡県浜松市
- Year and Date
  2008-02-07
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Evolution of Eye towards the origin of sensory organ2008
- Author(s)
  K. Ikeo
- Organizer
  遺伝研国際シンポジウム:ゲノム進化の新視点から基礎生命活動を探る
- Place of Presentation
  如水会館(東京都)
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Is there a common origin between cnidarian and dinoflagellate nematocysts2008
- Author(s)
  Hwang, JS., Ikeo, K., et.al.
- Organizer
  12th Evolutionary Biology Meeting 2008
- Place of Presentation
  France
- Year and Date
  2008-09-24
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] molecular anatomy の試み - 遺伝子データと形態データ2008
- Author(s)
  池尾一穂
- Organizer
  第113 回日本解剖学会総会・全国学術集会
- Place of Presentation
  大分大学医学部(大分県由布)
- Year and Date
  2008-03-28
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Evolution of nervous system from the viewpoint of comparative genomic and gene expressionics2008
- Author(s)
  Gojobori, T., Hwang, JS., Hayakawa, S., Noda, AO., Imanishi, T., Takaku, Y., Mineta, K., Ikeo, K.
- Organizer
  International Congress of Genetics
- Place of Presentation
  Germany
- Year and Date
  2008-07-12
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] molecular anatomyの試み-遺伝子データと形態データ2008
- Author(s)
  池尾一穂
- Organizer
  第113回日本解剖学会総会・全国学術集会
- Place of Presentation
  大分大学医学部
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Evolution of Eyetowards the origin of sensory organ2008
- Author(s)
  Ikeo, K.
- Organizer
  遺伝研国際シンポジウム:ゲノム進化の新視点から基礎生命活動を探る
- Place of Presentation
  如水会館(東京都千代田区)
- Year and Date
  2008-03-27
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Large Scale screening of human transcriptome: An Introduction of Human Genome Network Project2007
- Author(s)
  K. Ikeo
- Organizer
  Bose Institute Bioinformatics Centre
- Place of Presentation
  Kolkata (India)
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] 生物研究におけるデータベースの位置づけ2007
- Author(s)
  池尾一穂
- Organizer
  第三回マリンバイオ先端セミナー
- Place of Presentation
  筑波大学下田臨海実験センター(静岡県下田市)
- Year and Date
  2007-12-20
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] 遺伝子発現データを用いたネットワーク構築の実際2007
- Author(s)
  池尾一穂
- Organizer
  沼津バイオインフォマティクス講座
- Place of Presentation
  沼津産業振興プラザ(沼津市).
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] 生物研究におけるデータベースの位置づけ2007
- Author(s)
  池尾一穂
- Organizer
  第三回マリンバイオ先端セミナー
- Place of Presentation
  筑波大学下田臨海実験センター
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] 遺伝子発現データを用いたネットワーク構築の実際2007
- Author(s)
  池尾一穂
- Organizer
  沼津バイオインフォマティクス講座
- Place of Presentation
  沼津産業振興プラザ(静岡県沼津)
- Year and Date
  2007-11-17
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Large Scale screening of human transcriptome: An Introduction of Human Genome Network Project2007
- Author(s)
  K. Ikeo
- Organizer
  Symposium on Trends in Human Genetics
- Place of Presentation
  Toshali Sands (lndia)
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Large Scale screening of human transcriptome: An Introduction of Human Genome Network Project2007
- Author(s)
  Ikeo, K.
- Organizer
  Bose Institute Bioinformatics Centre
- Place of Presentation
  Kolkata, India
- Year and Date
  2007-08-24
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] The proposal of gene expression data for molecular evolution as an example using the GNP platform.2007
- Author(s)
  K. Ikeo
- Organizer
  SMBE 2007 Annual Meeting
- Place of Presentation
  Dalhousie University (Canada)
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] The proposal of gene expression data for molecular evolution as an example using the GNP platform2007
- Author(s)
  Ikeo, K.
- Organizer
  SMBE 2007 Annual Meeting
- Place of Presentation
  Dalhousie University (Halifax, Canada)
- Year and Date
  2007-06-28
- Data Source
  KAKENHI-PROJECT-19570007
[Presentation] Large Scale screening of human transcriptome: An Introduction of Human Genome Network Project2007
- Author(s)
  Ikeo, K.
- Organizer
  Symposium on Trends in Human Genetics
- Place of Presentation
  Toshali Sands (Orissa, India)
- Year and Date
  2007-08-21
- Data Source
  KAKENHI-PROJECT-19570007

1. GOJOBORI Takashi (50162136)

# of Collaborated Projects: 14 results

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IKEO KAZUHO 池尾 一穂

IKEO Kazuho 池尾 一穂

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Study of Information analysis and modelinigPrincipal Investigator

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Plant genetic loci controlling rhizosphere microbial community compositionPrincipal Investigator

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Evolution of Eye as sensory organPrincipal Investigator

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The origin of Dinoflagellate lens-eye from DNA and morphologyPrincipal Investigator

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遺伝子発現比較による生物多様性の分子進化メカニズムの解明Principal Investigator

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IKEO KAZUHO 池尾一穂

IKEO Kazuho 池尾一穂