Osada Naoki 長田直樹

… Alternative Names

OSADA Naoki 長田直樹

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Researcher Number	70416270
Other IDs	https://orcid.org/0000-0003-0180-5372
Affiliation (Current)	2025: 北海道大学, 情報科学研究院, 准教授
Affiliation (based on the past Project Information) *help	2019 – 2024: 北海道大学, 情報科学研究院, 准教授 2023: 北海道大学, 情報科学研究科, 准教授 2018: 北海道大学, 情報科学研究科, 准教授 2015 – 2016: 北海道大学, 情報科学研究科, 准教授 2010 – 2014: 国立遺伝学研究所, 集団遺伝研究系, 助教 … More 2008: National Institute of Biomedical Innovation, 生物資源研究部, 研究員 2008: National Institute of Biomedical Innovation, 生物資源研究部・遺伝子資源研究室, 研究員 2007: National Institute of Biomedical Innovation, 生物資源研究部遺伝子資源研究室, 研究員 2007: 独立行政法人医薬基盤研究所, 生物資源研究, 研究員 Less
Review Section/Research Field	Principal Investigator Basic Section 45050:Physical anthropology-related / Transformative Research Areas, Section (I) / Complex systems / Evolutionary biology / Evolutionary biology / Biodiversity/Systematics Except Principal Investigator Basic Section 43050:Genome biology-related / Transformative Research Areas, Section (I) / Basic Section 55020:Digestive surgery-related / Complex systems / Evolutionary biology / Biological Sciences / 基礎ゲノム科学
Keywords	Principal Investigator 進化 / ゲノム / 日本列島 / ヒト / ウイルス / レトロエレメント / 内在性レトロウイルス / ヒトゲノム / 考古学 / 哺乳類 … More / 動物考古学 / 環境適応 / 家畜化 / 古代ゲノム / ゲノム配列 / ヤポネシア人 / 集団遺伝学 / 人口動態 / 日本人 / 遺伝的多様性 / ヤポネシア / 日本列島人 / 有害変異 / 共進化 / 相互作用 / 集団遺伝 / 分子進化 / 植物 / 遺伝子発現 / ゲノム進化 / トランスクリプトーム / 異質倍数体 / 生態学 / 遺伝学 / グノム / 遺伝子交流 / 霊長類 / 種分化 … More Except Principal Investigator ゲノム進化 / 人類学 / 考古学 / ゲノム / 種分化 / カニクイザル / ゲノム比較 / 細菌進化 / 集団遺伝 / 集団ゲノム / タンパク構造 / 適応分化 / 適応進化 / 植物考古学 / 動物考古学 / bioarchaeology / 統合生物考古学 / 情報発信 / 若手研究者育成 / 研究統括 / 骨考古学 / 生物考古学 / 人骨 / バイオマーカー / circular RNA / exosome / 膵癌 / 古代人ゲノム / 現代人ゲノム / ヤポネシア / 文理融合研究 / 言語学 / 分離融合研究 / ヤポネシア人 / 哺乳類 / 進化 / 突然変異 / 比較ゲノム / ムササビ / カピバラ / ゲノム解析 / ABO式血液型遺伝子 / 遺伝子変換 / 突然変異パターン / チベットモンキー / Rh式血液型遺伝子 / 反復配列 / CNS / 霊長類 / ebony / 次世代シークエンサー / 生殖的隔離 / RNAseq / ドーパミン / トランス遺伝子発現制御 / シス遺伝子発現制御 / ショウジョウバエ / 多面発現 / ドーパミン代謝系 / 性行動 / 体色変異 / CXCL1 / 遺伝子発現調節 / 偽遺伝子 / CXCL1L / 遺伝子重複 / 翻訳 / ケモカイン / 再編 Less

Integrative Bioarcheology: Reconstruction of Human Prehistory around the Japanese Archipelago
- Principal Investigator
  
  山田康弘
- Project Period (FY)
  2023 – 2027
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (I)
- Research Institution
  Tokyo Metropolitan University
Exploration of the impact of prehistoric human activities on animal communities and environmental conditionsPrincipal Investigator
- Principal Investigator
  
  長田直樹
- Project Period (FY)
  2023 – 2027
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (I)
- Research Institution
  Hokkaido University
Thousands of adaptive changes emerging from thousands of genomes within a species
- Principal Investigator
  
  小林一三
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  National Institute for Basic Biology
血中exosome内circRNA発現解析による膵癌の診断・予後関連マーカー探索
- Principal Investigator
  
  柿坂達彦
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 55020:Digestive surgery-related
- Research Institution
  Hokkaido University
Comprehensive search and population genetic analysis of virus-like sequences in human genomesPrincipal Investigator
- Principal Investigator
  
  長田直樹
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 45050:Physical anthropology-related
- Research Institution
  Hokkaido University
Origin and formation of Yaponesians based on genome sequences
- Principal Investigator
  
  SAITOU Naruya
- Project Period (FY)
  2018 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  National Institute of Genetics
Deciphering Origin and Establishment of Japonesians mainly based on genome sequence dataPrincipal Investigator
- Principal Investigator
  
  Osada Naoki
- Project Period (FY)
  2018 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Hokkaido University
Integrative study of nucleotide sequence evolution using primate genomes as model
- Principal Investigator
  
  SAITOU NARUYA
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Evolutionary biology
- Research Institution
  National Institute of Genetics
Theoretical and empirical studies for compensatory molecular evolutionPrincipal Investigator
- Principal Investigator
  
  Osada Naoki
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  Hokkaido University
  National Institute of Genetics
Analyses of behavior incompatibility triggered by expression changes of pigmentation genes
- Principal Investigator
  
  Takahashi Aya
- Project Period (FY)
  2011 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Tokyo Metropolitan University
  National Institute of Genetics
Analysis of gene expression network of natural and artificial allotetraploids using next generation sequencersPrincipal Investigator
- Principal Investigator
  
  OSADA Naoki
- Project Period (FY)
  2010 – 2013
- Research Category
  
  Grant-in-Aid for Young Scientists (A)
- Research Field
  
  Evolutionary biology
- Research Institution
  National Institute of Genetics
Birth and Death of Chemokine Family Genes and Gain of Novel Functions
- Principal Investigator
  
  NOMIYAMA Hisayuki
- Project Period (FY)
  2007 – 2008
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  Kumamoto University
Inter- and Intra-specific Genetic Diversity in Genus Macaca.Principal Investigator
- Principal Investigator
  
  OSADA Naoki
- Project Period (FY)
  2007 – 2008
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Biodiversity/Systematics
- Research Institution
  National Institute of Biomedical Innovation

[Book] 進化で読み解く　バイオインフォマティクス入門2019
- Author(s)
  長田直樹
- Total Pages
  232
- Publisher
  森北出版
- ISBN
  9784627261419
- Data Source
  KAKENHI-PLANNED-18H05511
[Book] ヒトは病気とともに進化した2013
- Author(s)
  太田博樹，長谷川眞理子，長田直樹，大橋順，中込滋樹，間野修平，西野穣，長岡朋人，柴田弘紀
- Total Pages
  232
- Publisher
  勁草書房
- Data Source
  KAKENHI-PROJECT-22687021
[Book] ヒトは病気とともに進化した　太田博樹・長谷川眞理子編著　第二章2013
- Author(s)
  長田直樹
- Publisher
  勁草書房
- Data Source
  KAKENHI-PLANNED-23113008
[Book] 遺伝子図鑑　「遺伝子図鑑」編集委員会編　第七章1,2,11節2013
- Author(s)
  明石裕，長田直樹
- Publisher
  悠書館
- Data Source
  KAKENHI-PLANNED-23113008
[Book] An overview of transcriptome studies in nonhuman primates. In: Post genome Biology of primates2012
- Author(s)
  Naoki Osada
- Total Pages
  286
- Publisher
  Springer
- Data Source
  KAKENHI-PROJECT-22687021
[Book] An overview of transcriptome studies in nonhuman primates. In : Post genome Biology of primates (Primatology monographs)2012
- Author(s)
  Naoki Osada
- Publisher
  Springer-Verlag
- Data Source
  KAKENHI-PROJECT-22687021
[Book] An overview of transcriptome studies in nonhuman primates. In : Post genome Biology of primates (Primatology monographs)2012
- Author(s)
  Osada N.
- Publisher
  Springer-Verlag
- Data Source
  KAKENHI-PLANNED-23113008
[Book] An overview of transcriptome studies in nonhuman primates. In: Post genome Biology of primates (Primatology monographs). Go, Y., Imai, H., Hirai, H. Eds.2012
- Author(s)
  Osada, N.
- Publisher
  Springer-Verlag
- Data Source
  KAKENHI-PLANNED-23113008
[Book] Bucentaur (Bcnt) Gene Family : Gene Duplication and Retrotransposon Insertion In Gene Duplication2011
- Author(s)
  Iwashita, S., Osada, N.
- Publisher
  InTech
- Data Source
  KAKENHI-PROJECT-22687021
[Book] Bucentaur (Bent) Gene Family : Gene Duplication and Retrotransposon Insertion In Gene Duplication2011
- Author(s)
  Iwashita, S., Osada, N.
- Publisher
  InTech
- Data Source
  KAKENHI-PLANNED-23113008
[Book] Evolution of GeneExpression in Human and Chimpanzee Brains.In:Encyclopedia of Life Sciences(ELS)2008
- Author(s)
  Naoki Osada, Sumio Sugano, Yutaka Suzuki
- Publisher
  John Wiley & Sons,Ltd
- Data Source
  KAKENHI-PROJECT-19770073
[Book] Handbook of Human Molecular Evolution(David N. Cooper(Editor). Hildegard Kehrer-Sawatzki(Editor))2008
- Author(s)
  Naoki Osada, Sumio Sugano, Yutaka Suzuki
- Publisher
  John Wiley & Sons, Ltd
- Data Source
  KAKENHI-PROJECT-19770073
[Book] Handbook of Human Molecular Evolution(David N. Cooper (Editor), Hildegard Kehrer-Sawatzki (Editor))2008
- Author(s)
  Naoki Osada, Sumio Sugano, Yutaka Suzuki
- Publisher
  John Wiley & Sons, Ltd(Chichester)
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Exploring The Interplay Between Scoring Functions and Physico-chemical Properties in Antibody-antigen Docking2024
- Author(s)
  Sangeetha Ratnayake, Axel Martinelli, Toshinori Endo, Naoki Osada
- Journal Title
  
  IPSJ Transactions on Bioinformatics
  
  Volume: 17 Issue: 0 Pages: 10-17
- DOI
  10.2197/ipsjtbio.17.10
- ISSN
  1882-6679
- Language
  English
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K05735
[Journal Article] Inference of selective force on house mouse genomes during secondary contact in East Asia2024
- Author(s)
  Fujiwara Kazumichi、Kubo Shunpei、Endo Toshinori、Takada Toyoyuki、Shiroishi Toshihiko、Suzuki Hitoshi、Osada Naoki
- Journal Title
  
  Genome Research
  
  Volume: 34 Pages: 366-375
- DOI
  10.1101/gr.278828.123
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-23H04846, KAKENHI-PROJECT-23K23970
[Journal Article] Phylogenetics and Population Genetics of the Asian House Shrew, Suncus murinus-S. montanus Species Complex, Inferred From Whole-Genome and Mitochondrial DNA Sequences, with Special Reference to the Ryukyu Archipelago, Japan2024
- Author(s)
  Ohdachi Satoshi D.、Fujiwara Kazumichi、Shekhar Chandra、Son Nguyn Trung、Suzuki Hitoshi、Osada Naoki
- Journal Title
  
  Zoological Science
  
  Volume: 41 Issue: 2 Pages: 216-229
- DOI
  10.2108/zs230030
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23H04846
[Journal Article] Genealogical characterization of regional populations and dorsal coat color variation in the house mouse Mus musculus from Asia based on haplotype structure analysis of a gene-rich region harboring Mc1r2023
- Author(s)
 Zakoh Kazuhiro、Fujiwara Kazumichi、Takada Toyoyuki、Osada Naoki、Suzuki Hitoshi
- Journal Title
 
 Genes Genet. Syst.
 
 Volume: 98 Issue: 2 Pages: 73-87
- DOI
 10.1266/ggs.22-00157
- ISSN
 1341-7568, 1880-5779
- Year and Date
 2023-04-01
- Language
 English
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PLANNED-23H04846
[Journal Article] Whole-genome sequencing analysis of wild house mice (Mus musculus) captured in Madagascar2022
- Author(s)
 Kazumichi Fujiwara, Marie C. Ranorosoa, Satoshi D. Ohdachi, Satoru Arai, Yuki Sakuma, Hitoshi Suzuki, Naoki Osada
- Journal Title
 
 Genes Genet. Syst.
 
 Volume: 97 Issue: 4 Pages: 193-207
- DOI
 10.1266/ggs.22-00090
- ISSN
 1341-7568, 1880-5779
- Year and Date
 2022-08-01
- Language
 English
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
 KAKENHI-PLANNED-18H05508, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-23K23970
[Journal Article] Insights into Mus musculus population structure across Eurasia revealed by whole-genome analysis2022
- Author(s)
  Fujiwara K., Kawai Y., Takada T., Shiroishi T., Saitou N., Suzuki H., and Osada N
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 14(5) Issue: 5 Pages: 1-14
- DOI
  10.1093/gbe/evac068
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H03608, KAKENHI-PLANNED-18H05508, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-23K23970
[Journal Article] House mouse Mus musculus dispersal in East Eurasia inferred from 98 newly determined complete mitochondrial genome sequences.2021
- Author(s)
  Li Y, Fujiwara K, Osada N, Kawai Y, Takada T, Kryukov AP, Abe K, Yonekawa H, Shiroishi T, Moriwaki K, Saitou N, Suzuki H
- Journal Title
  
  Heredity
  
  Volume: 126 Issue: 1 Pages: 132-147
- DOI
  10.1038/s41437-020-00364-y
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K19312, KAKENHI-PLANNED-18H05508, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-18H03608
[Journal Article] Exploring models of human migration to the Japanese archipelago using genome-wide genetic data2021
- Author(s)
  OSADA NAOKI、KAWAI YOSUKE
- Journal Title
  
  Anthropological Science
  
  Volume: 129 Issue: 1 Pages: 45-58
- DOI
  10.1537/ase.201215
- NAID
  130008030483
- ISSN
  0918-7960, 1348-8570
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-18H05511
[Journal Article] Phylogeographic study using nuclear genome sequences of Asip to infer the origins of ventral fur color variation in the house mouse Mus musculus2021
- Author(s)
 Takeishi, T., Fujiwara, K., Osada, N., Mita, A., Takada, T., Shiroishi, T., and Suzuki, H.
- Journal Title
 
 Genes Genet. Syst.
 
 Volume: 96 Issue: 6 Pages: 271-284
- DOI
 10.1266/ggs.21-00075
- ISSN
 1341-7568, 1880-5779
- Year and Date
 2021-12-01
- Language
 English
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PLANNED-18H05508, KAKENHI-PLANNED-18H05511
[Journal Article] ヤポネシア人の人口・歴史推定2021
- Author(s)
  長田直樹
- Journal Title
  
  メディカル・サイエンス・ダイジェスト
  
  Volume: 47 Pages: 476-478
- Data Source
  KAKENHI-PLANNED-18H05511
[Journal Article] Demographic history of the brown bear (Ursus artcos) on Hokkaido Island, Japan, based on whole-genomic sequence analysis. Genome Biology and Evolution2021
- Author(s)
  Endo, Y., Osada, N., Mano, T., and Masuda, R.
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: - Issue: 9
- DOI
  10.1093/gbe/evab195
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-18H05508, KAKENHI-PLANNED-18H05511
[Journal Article] Identification of Characteristic Genomic Markers in Human Hepatoma HuH-7 and Huh7.5.1-8 Cell Lines2020
- Author(s)
  Kawamoto M#, Yamaji T#, Saito K, Shirasago Y, Satomura K, Endo T, Fukasawa M, Hanada K, Osada N.
- Journal Title
  
  Front Genet
  
  Volume: 11 Pages: 546106-546106
- DOI
  10.3389/fgene.2020.546106
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K07357, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-17H04003
[Journal Article] Comparative characterization of flavivirus production in two cell lines: Human hepatoma-derived Huh7.5.1-8 and African green monkey kidney-derived Vero2020
- Author(s)
  Kyoko Saito, Masayoshi Fukasawa, Yoshitaka Shirasago, Ryosuke Suzuki, Naoki Osada, Toshiyuki Yamaji, Takaji Wakita, Eiji Konishi, Kentaro Hanada
- Journal Title
  
  PLOS ONE
  
  Volume: 15 Issue: 4 Pages: e0232274-e0232274
- DOI
  10.1371/journal.pone.0232274
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K08362, KAKENHI-PROJECT-17K07357, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-17H04003
[Journal Article] Testing sex-biased admixture origin of macaque species using autosomal and X-chromosomal genomic sequences2020
- Author(s)
  Osada Naoki、Matsudaira Kazunari、Hamada Yuzuru、Malaivijitnond Suchinda
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 13 Pages: 1-14
- DOI
  10.1093/gbe/evaa209
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-19K06865
[Journal Article] ヤポネシア人の歴史の解明が医学にもたらすもの2019
- Author(s)
  長田直樹
- Journal Title
  
  実験医学
  
  Volume: 37 Pages: 926-929
- Data Source
  KAKENHI-PLANNED-18H05511
[Journal Article] Genetic diversity and population structure of Glossina morsitans morsitans in the active foci of human African trypanosomiasis in Zambia and Malawi2019
- Author(s)
  Yukiko Nakamura, Junya Yamagishi, Kyoko Hayashida, Naoki Osada, Elisha Chatanga, Cornelius Mweempwa, Kalinga Chilongo, John Chisi, Jenelisa Musaya, Ryosuke Omori, Noboru Inoue, Boniface Namangala, Chihiro Sugimoto
- Journal Title
  
  PLoS Negl. Trop. Dis
  
  Volume: 13 Issue: 7 Pages: e0007568-e0007568
- DOI
  10.1371/journal.pntd.0007568
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-17K15366
[Journal Article] Achiasmy and sex chromosome evolution2019
- Author(s)
  Kazuhiro Satomura, Naoki Osada, Toshinori Endo
- Journal Title
  
  Ecological Genetics and Genomics
  
  Volume: 13 Pages: 1000046-1000046
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-18H05511
[Journal Article] A key metabolic gene for recurrent freshwater colonization and radiation in fishes2019
- Author(s)
  Ishikawa Asano, Kabeya Naoki, Ikeya Koki, Kakioka Ryo, Cech Jennifer N., Osada Naoki, Leal Miguel C., Inoue Jun, Kume Manabu, Toyoda Atsushi, Tezuka Ayumi, Nagano Atsushi J., Yamasaki Yo Y., Suzuki Yuto, Kokita Tomoyuki, Takahashi Hiroshi et al.
- Journal Title
  
  Science
  
  Volume: 364 Issue: 6443 Pages: 886-889
- DOI
  10.1126/science.aau5656
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K05686, KAKENHI-PROJECT-19K22329, KAKENHI-PROJECT-19K15908, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-17H03629, KAKENHI-PROJECT-19H03269, KAKENHI-PROJECT-19H03277, KAKENHI-PROJECT-16H06279
[Journal Article] Novel endogenous simian retroviral integrations in Vero cells: implications for quality control of a human vaccine cell substrate2018
- Author(s)
  Sakuma Chisato、Sekizuka Tsuyoshi、Kuroda Makoto、Kasai Fumio、Saito Kyoko、Ikeda Masaki、Yamaji Toshiyuki、Osada Naoki、Hanada Kentaro
- Journal Title
  
  Scientific Reports
  
  Volume: 8 Issue: 1 Pages: 644-644
- DOI
  10.1038/s41598-017-18934-2
- NAID
  120006401475
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17H01623, KAKENHI-PROJECT-17H04003, KAKENHI-PLANNED-18H05511
[Journal Article] Comprehensive phylogenomic analysis reveals a novel cluster of simian endogenous retroviral sequences in Colobinae monkeys2018
- Author(s)
  Ikeda Masaki、Satomura Kazuhiro、Sekizuka Tsuyoshi、Hanada Kentaro、Endo Toshinori、Osada Naoki
- Journal Title
  
  American Journal of Primatology
  
  Volume: 80 Issue: 7
- DOI
  10.1002/ajp.22882
- NAID
  120006643589
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-18H05508, KAKENHI-PLANNED-18H05511
[Journal Article] Translational repression of a splice variant of cynomolgus macaque CXCL1L by its C-terminal sequence2017
- Author(s)
  Hisayuki Nomiyama, Naoki Osada, Ichiro Takahashi, Keiji Terao, Kazuya Yamagata, Osamu Yoshie
- Journal Title
  
  J. Interferon Cytokine Res.
  
  Volume: 37 Pages: 129-138
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-26251040
[Journal Article] Translational repression of a splice variant of cynomolgus macaque CXCL1L by its C-terminal sequence2017
- Author(s)
  Hisayuki Nomiyama, Naoki Osada, Ichiro Takahashi, Keiji Terao, Kazuya Yamagata, Osamu Yoshie
- Journal Title
  
  J. Interferon Cytokine Res.
  
  Volume: 37 Issue: 3 Pages: 129-138
- DOI
  10.1089/jir.2016.0085
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-26440202, KAKENHI-PROJECT-16H05328
[Journal Article] Compensatory Evolution2016
- Author(s)
  Naoki Osada
- Journal Title
  
  Encyclopedia of Evolutionary Biology
  
  Volume: 1 Pages: 329-333
- DOI
  10.1016/b978-0-12-800049-6.00174-8
- ISBN
  9780128004265
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-26440202
[Journal Article] Whole-Genome Sequencing of Six Mauritian Cynomolgus Macaques (Macaca fascicularis) Reveals a Genome-Wide Pattern of Polymorphisms under Extreme Population Bottleneck.2015
- Author(s)
  Osada N., Hettiarachchi N., Babarinde I., Saitou N., Blancher A
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 7 Issue: 3 Pages: 821-830
- DOI
  10.1093/gbe/evv033
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-25251042, KAKENHI-PROJECT-26251040, KAKENHI-PLANNED-23113008
[Journal Article] Genetic diversity in humans and non-human primates and its evolutionary consequences2015
- Author(s)
  Naoki Osada
- Journal Title
  
  Genes Genet. Syst.
  
  Volume: 90 Issue: 3 Pages: 133-145
- DOI
  10.1266/ggs.90.133
- NAID
  130005105460
- ISSN
  1341-7568, 1880-5779
- Language
  English
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26440202, KAKENHI-PLANNED-23113008, KAKENHI-PROJECT-26251040
[Journal Article] CYP2D44 polymorphisms in cynomolgus and rhesus macaques2015
- Author(s)
  3.Yasuhiro Uno*, Shotaro Uehara, Sakae Kohara, Naoki Osada, Norie Murayama, Hiroshi Yamazaki.
- Journal Title
  
  Mol. Biol. Rep.
  
  Volume: 印刷中
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-26251040
[Journal Article] Compensatory Evolution2015
- Author(s)
  Naoki Osada
- Journal Title
  
  Encyclopedia of Evolutionary Biology
  
  Volume: 印刷中
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-26440202
[Journal Article] An individual-based diploid model predicts limited conditions under which stochastic gene expression becomes advantageous2015
- Author(s)
  Tomotaka Matsumoto, Katsuhiko Mineta, Naoki Osada, Hitoshi Araki
- Journal Title
  
  Frontiers in Genetics
  
  Volume: 6 Pages: 336-336
- DOI
  10.3389/fgene.2015.00336
- NAID
  120005981380
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26440202, KAKENHI-PLANNED-23113008
[Journal Article] Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts2015
- Author(s)
  Chao-Li Huang, Pei-Hua Pu, Hao-Jen Huang, Huang-Mo Sung, Hung-Jiun Liaw, Yi-Min Chen, Chien-Ming Chen, Ming-Ban Huang, Naoki Osada, Takashi Gojobori, Tun-Wen Pai, Yu-Tin Chen*, Chi-Chuan Hwang*, Tzen-Yuh Chiang
- Journal Title
  
  BMC Genomics
  
  Volume: 16 Issue: 1 Pages: 188-188
- DOI
  10.1186/s12864-015-1369-8
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26440202, KAKENHI-PLANNED-23113008
[Journal Article] Complex patterns of cis-regulatory polymorphisms in ebony underlie standing pigmentation variation in Drosophila melanogaster2015
- Author(s)
  Ryutaro Miyagi, Noriyoshi Akiyama, Naoki Osada, Aya Takahashi
- Journal Title
  
  Mol. Ecol.
  
  Volume: 24 Issue: 23 Pages: 5829-5841
- DOI
  10.1111/mec.13432
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-26440202, KAKENHI-PLANNED-23113008
[Journal Article] Population genetics of non-genetic traits: evolutionary roles of stochasticity in gene expression2015
- Author(s)
  Katsuhiko Mineta, Tomotaka Matsumoto, Naoki Osada, Hitoshi Araki
- Journal Title
  
  Gene
  
  Volume: 562 Issue: 1 Pages: 16-21
- DOI
  10.1016/j.gene.2015.03.011
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-26440202, KAKENHI-PLANNED-23113008
[Journal Article] CYP2D44 polymorphisms in cynomolgus and rhesus macaques2015
- Author(s)
  Uno Y, Uehara S, Kohara S, Osada N, Murayama N, Yamazaki H
- Journal Title
  
  Mol. Biol. Rep.
  
  Volume: - Issue: 7 Pages: 1149-1155
- DOI
  10.1007/s11033-015-3863-0
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-23113008
[Journal Article] Whole genome sequencing of Tibetan macaque (Macaca thibetana) provides new insight into the macaque evolutionary history2014
- Author(s)
  Zhenxin Fan, Guang Zhao, Peng Li, Naoki Osada, Jinchuan Xing, Yong Yi, Lianming Du, Pedro Silva, Hongxing Wang, Ryuichi Sakate, Xiuyue Zhang, Huailiang Xu, Bisong Yue*, Jing Li
- Journal Title
  
  Mol. Biol. Evol.
  
  Volume: online advance Issue: 6 Pages: 1475-1489
- DOI
  10.1093/molbev/msu104
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] Prdm9 Polymorphism Unveils Mouse Evolutionary Tracks2014
- Author(s)
  Kono H, Tamura M, Osada N, Suzuki H, Abe K, Moriwaki K, Ohta K, Shiroishi T
- Journal Title
  
  DNA Research
  
  Volume: - Issue: 3 Pages: 315-326
- DOI
  10.1093/dnares/dst059
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-13J08945, KAKENHI-PROJECT-21241046, KAKENHI-PLANNED-23113008, KAKENHI-PLANNED-23114003, KAKENHI-PROJECT-24650241, KAKENHI-ORGANIZER-25112001, KAKENHI-PUBLICLY-25125721, KAKENHI-PUBLICLY-26112515, KAKENHI-PROJECT-26250025
[Journal Article] The genome landscape of the African green monkey kidney-derived Vero cell line.2014
- Author(s)
  Osada N, Kohara A, Yamaji T, Hirayama N, Kasai F, Sekizuka T, Kuroda M, Hanada K
- Journal Title
  
  DNA Res.
  
  Volume: 21 Issue: 6 Pages: 673-683
- DOI
  10.1093/dnares/dsu029
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-23113008, KAKENHI-PLANNED-23117005, KAKENHI-PROJECT-25670065, KAKENHI-PROJECT-26251040, KAKENHI-PROJECT-26440069
[Journal Article] Adaptive divergence with gene flow in incipient speciation of Miscanthus floridulus/sinensis complex (Poaceae).2014
- Author(s)
  Huang C-L, Ho C-W, Chiang Y-C, Shigemoto Y, Hsu T-W, Hwang C-C, Ge X-J, Chen C, Wu T-H, Chou C-H, Huang H-J, Gojobori T, Osada N, Chiang T-Y
- Journal Title
  
  Plant J.
  
  Volume: 80 Issue: 5 Pages: 834-847
- DOI
  10.1111/tpj.12676
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-23113008
[Journal Article] Dopamine receptor genes and evolutionary differentiation in the domestication of fighting cocks and long-crowing chickens.2014
- Author(s)
  Komiyama T, Iwama H, Osada N, Nakamura Y, Kobayashi H, Tateno Y, Gojobori T
- Journal Title
  
  PLOS ONE
  
  Volume: 9 Issue: 7 Pages: e101778-e101778
- DOI
  10.1371/journal.pone.0101778
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-23113008
[Journal Article] Extracting population genetics information from a diploid genome sequence (review)2014
- Author(s)
  Naoki Osada
- Journal Title
  
  Front. Ecol. Evol
  
  Volume: 2 Pages: 7-7
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021
[Journal Article] Extracting population genetics information from a diploid genome sequence2014
- Author(s)
  Naoki Osada
- Journal Title
  
  Front. Ecol. Evol.
  
  Volume: 2 Pages: 7-7
- DOI
  10.3389/fevo.2014.00007
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008, KAKENHI-PROJECT-26251040
[Journal Article] 有害な変異と偶然の効果―中立説とほぼ中立説2013
- Author(s)
  長田直樹
- Journal Title
  
  生物の科学・遺伝
  
  Volume: ５月号 Pages: 322-326
- Data Source
  KAKENHI-PLANNED-23113008
[Journal Article] Finding the factors of reduced genetic diversity on X chromosomes of Macaca fascicularis : male-driven evolution, demography, and natural selection2013
- Author(s)
  Naoki Osada
- Journal Title
  
  Genetics
  
  Volume: 195 Issue: 3 Pages: 1007-1025
- DOI
  10.1534/genetics.113.156703
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12J03234, KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] Mitochondrial-nuclear interactions and accelerated compensatory evolution : Evidence from the primate cytochrome c oxidase complex2012
- Author(s)
  Naoki Osada, Hiroshi Akashi
- Journal Title
  
  Mol. Biol. Evol
  
  Volume: 29 Issue: 1 Pages: 337-346
- DOI
  10.1093/molbev/msr211
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] Footprints of natural and artificial selection for photoperiod pathway genes in Oryza2012
- Author(s)
  Chao-Li Huang, Cheng-Yu Hung, Yu-Chung Chiang, Chi-Chuan Hwang, Tsai-Wen Hsu, Chi-Chun Huang, Kuo-Hsiang Hung, Kun-Chan Tsai, Kuo-HsiungWang, Naoki Osada, Barbara Anna Schaal, Tzen-Yuh Chiang
- Journal Title
  
  Plant J
  
  Volume: 70 Issue: 5 Pages: 769-782
- DOI
  10.1111/j.1365-313x.2012.04915.x
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] Weak selection and protein evolution (review)2012
- Author(s)
  Hiroshi Akashi, Naoki Osada, Tomoko Ohta
- Journal Title
  
  Genetics
  
  Volume: 192 Issue: 1 Pages: 15-31
- DOI
  10.1534/genetics.112.140178
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] Evolutionary rates of commonly used nuclear and organelle markers of Arabidopsis relatives (Brassicaceae)2012
- Author(s)
  Chi-Chun Huan, Kuo-Hsiang Hung, Wei-KuangWang, Chao-Li Huang, Tsai-Wen Hsu, Naoki Osada, Chi-Chuan Hwang, Tzen-Yuh Chiang
- Journal Title
  
  Gene
  
  Volume: 499 Issue: 1 Pages: 194-201
- DOI
  10.1016/j.gene.2012.02.037
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] CpG site degeneration triggered by the loss of functional constraint created a highly polymorphic macaque drug-metabolizing gene, CYP1A22011
- Author(s)
  Uno, Y., Osada, N.
- Journal Title
  
  BMC Evol.Biol.
  
  Volume: 11 Issue: 1 Pages: 283-283
- DOI
  10.1186/1471-2148-11-283
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] Phylogenetic inconsistency caused by ancient sex-biased migration2011
- Author(s)
  Osada, N.
- Journal Title
  
  PloS ONE
  
  Volume: 6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021
[Journal Article] Phylogenetic inconsistency caused by ancient sex-biased migration2011
- Author(s)
  Naoki Osada
- Journal Title
  
  PLoS ONE
  
  Volume: 6 Issue: 9 Pages: e25549-e25549
- DOI
  10.1371/journal.pone.0025549
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021, KAKENHI-PLANNED-23113008
[Journal Article] Population genetics in non-model organisms : II. Natural selection in marginal habitats revealed by deep sequencing on dual platforms2011
- Author(s)
  Renchao Zhou, Shaoping Ling, Wenming Zhao, Naoki Osada, Sufang Chen, Meng Zhang, Hua Bao, Cairong Zhong, Bing Zhang, Xuemei Lu, David Turissini, Norman C. Duke, Jian Lu, Suhua Shi, Chung-I Wu
- Journal Title
  
  Mol Biol Evol
  
  Volume: 28 Issue: 10 Pages: 2833-2842
- DOI
  10.1093/molbev/msr102
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021
[Journal Article] Multi-locus analysis of genetic divergence between outcrossing Arabidopsis species : evidence of genome-wide admixture2010
- Author(s)
  Wei-KuangWang, Chuan-Wen Ho, Kuo-Hsiang Hung, Kuo-HsiungWang, Chi-Chun Huang, Hitoshi Araki, Chi-Chuan Hwang, Naoki Osada, Tzen-Yuh Chiang
- Journal Title
  
  New Phytol
  
  Volume: 188 Issue: 2 Pages: 488-500
- DOI
  10.1111/j.1469-8137.2010.03383.x
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22687021
[Journal Article] Multiple duplication of the bucentaur gene family, which recruits the APE-like domain of retrotransposon: identification of a novel homolog and distinct cellular expression2009
- Author(s)
  Shintaro Iwashita, Kentaro Nakashima, Motoki Sasaki, Naoki Osada, Si-Young Song
- Journal Title
  
  Gene 435
  
  Pages: 88-95
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Quantifying dominance and deleterious effect on human disease genes2009
- Author(s)
  Naoki Osada, Shuhei Mano, Jun Gojobori
- Journal Title
  
  Proc. Natl. Acad. Sci. USA 106
  
  Pages: 841-847
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Multiple duplication of the bucentaur gene family, which recruits the APE-like domain of retrotransposon: identification of a novel homolog and distinct cellu1ar expression2009
- Author(s)
  Shintaro Iwashita, Kentaro Nakashima, Motoki Sasaki, Naoki Osada, Si-Young Song
- Journal Title
  
  Gene 435
  
  Pages: 88-95
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Duplication and Gene Conversion in the Drosophila melanogaster Genome2008
- Author(s)
  Naoki Osada, Hideki Innan
- Journal Title
  
  PLoS Genet. 4
- NAID
  120006576004
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Extensive expansion and diversification of the chemokine gene family in zebrafish : identification of a novel chemokine subfamily CX2008
- Author(s)
  Nomiyama H, Hieshima K, Osada N, Kato-Unoki Y, Otsuka-Ono K, Takegawa S, Izawa T, Yoshizawa A, Kikuchi Y, Tanase S, Miura R, Kusuda J, Nakao M, Yoshie O.
- Journal Title
  
  BMC Genomics (electronic) 222
  
  Pages: 9-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19510197
[Journal Article] Analysis of expressed sequence tags from liver in cynomolgus monkey (Macaca fascicularis) : A systematic identification of drug-metabolizing genes2008
- Author(s)
  Yasuhiro Uno, Yutaka Suzuki, Hiroyuki Wakaguri, Yoshiko Sakamoto, Hitomi Sano, Naoki Osada, Katsuyuki Hashimoto, Sumio Sugano, Itsuro Inoue
- Journal Title
  
  Febs lett 582
  
  Pages: 351-358
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Analysis of expressed sequence tags from liver incynomolgus monkeyMacaca fascicularis):A systematic identification of drug-metabolizing genes2008
- Author(s)
  Yasuhiro Uno, Yutaka Suzuki, Hiroyuki Wakaguri, Yoshiko Sakamoto, Hitomi Sano, Naoki Osada, Katsuyki Hashimoto, SumioSugano, Itsuro Inoue
- Journal Title
  
  Febs Letters 582
  
  Pages: 351-358
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Duplication and Gene Conversion in the Drosophila melanogaster Genome2008
- Author(s)
  Naoki Osada, Hideki Innan
- Journal Title
  
  PLoS Genet 4
- NAID
  120006576004
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta2008
- Author(s)
  Naoki Osada, Katsuyuki Hashimoto, Yosuke Kameoka, Makoto Hirata, Reiko Tanuma, Yasuhiro Uno, Itsuro Inoue, Munetomo Hida, Yutaka Suzuki, Sumio Sugano, Keiji Terao, Jun Kusuda, Ichiro Takahashi
- Journal Title
  
  BMC Genomics 9
  
  Pages: 90-90
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Large-scale analysis of Macaca fascicularis transcripts and inference ofgenetic divergence between M.fascicularis and M. mulatta.2008
- Author(s)
  Naoki Osada, Katsuyuki Hashimoto, Yosuke Kameoka, Makoto Hirata, R.eiko Tanuma, YasuhixoUno, Itsuro Inoue, Munetomo Hida, Yutaka Suzuki, Sumio Sugano, Keiji Tbrao, Jun Kusuda, Ichiro Takahashi
- Journal Title
  
  BMC Genoxnics 9
  
  Pages: 90-90
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Evolution of Gene Expression in Human and Chimpanzee Brains2008
- Author(s)
  Naoki Osada, Sumio Sugano, Yutaka Suzuki
- Journal Title
  
  Encyclopedia of Life Sciences (ELS)(John Wiley & Sons, Ltd)(Chichester)
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Extensive Expansion and Diversification of the Chemokine Gene Family in Zebrafish : Identification of a Novel Chemokine Subfamily CX2008
- Author(s)
  Hisayuki Nomiyama, Kunio Hieshima, Naoki Osada, Yoko Kato-Unoki, Kaori Otsuka-Ono, Sumio Takegawa, Toshiaki Izawa, Yutaka Kikuchi, Sumio Tanase, Retsu Miura, Jun Kusuda, Miki Nakao, Osamu Yoshie, Akio Yoshizawa
- Journal Title
  
  BMC Genomics 9
  
  Pages: 222-222
- Data Source
  KAKENHI-PROJECT-19770073
[Journal Article] Inference of expression -dependent negative selection based on polymorphism and divergence in the human genome.2007
- Author(s)
  Naoki Osada
- Journal Title
  
  Molecular Biology and Evolution 24
  
  Pages: 1622-1626
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] Inference of population history and selective force on house mouse genomes during secondary contact in East Asia2024
- Author(s)
  Naoki Osada
- Organizer
  SMBE Regional Meeting in Taiwan
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23H04846
[Presentation] Inference of population history and selective force on house mouse genomes during secondary contact in East Asia2024
- Author(s)
  Naoki Osada
- Organizer
  SMBE Regional Meeting in Taiwan
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K23970
[Presentation] Hybrids meet in Japan: pattern and mode of genomic admixture between subspecies of wild house mice (Mus musculus) in East Asia2023
- Author(s)
  Kazumichi Fujiwara, Shunpei Kubo, Tomoki Yano, Toshinori Endo, Toyoyuki Takada, Toshihiko Shiroishi, Hitoshi Suzuki, Naoki Osada
- Organizer
  IMGC2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K23970
[Presentation] ほぼ中立説と弱有害変異について―霊長類・げっ歯類ゲノム研究の視点から2023
- Author(s)
  長田直樹
- Organizer
  日本遺伝学会第95回大会
- Invited
- Data Source
  KAKENHI-PLANNED-23H04846
[Presentation] 人類の移動に伴う小型げっ歯類の拡散と進化2023
- Author(s)
  長田直樹
- Organizer
  日本進化学会第25回沖縄大会
- Data Source
  KAKENHI-PLANNED-23H04846
[Presentation] Genomic Insights into the Hybridization of House Mouse Subspecies in East Asia2023
- Author(s)
  Kazumichi Fujiwara, Shunpei Kubo, Toshinori Endo, Toyoyuki Takada, Toshihiko Shiroishi, Hitoshi Suzuki, Naoki Osada
- Organizer
  SMBE2023
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23H04846
[Presentation] Genomic Insights into the Hybridization of House Mouse Subspecies in East Asia2023
- Author(s)
  Kazumichi Fujiwara, Shunpei Kubo, Toshinori Endo, Toyoyuki Takada, Toshihiko Shiroishi, Hitoshi Suzuki, Naoki Osada
- Organizer
  SMBE2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K23970
[Presentation] Uncovering the role of environmental fluctuations in shaping the population structure of Japanese moles through genome sequencing2023
- Author(s)
  Takeru Tsunoi, Gohta Kinoshita, Masashi Harada, Jun J Sato, Go Yasuhiro, Shoji Tatsumoto, Reiko Mitsuhashi, Hitoshi Suzuki, Naoki Osada
- Organizer
  SMBE2023
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23H04846
[Presentation] Local populations demographic history of brown bears on whole-genome resequencing2023
- Author(s)
  Yu Endo, Naoki Osada, Tsutomu Mano, Alexei V. Abramov, Ryuichi Masuda
- Organizer
  SMBE2023
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23H04846
[Presentation] 人類の移動に伴う小型げっ歯類の拡散と進化2023
- Author(s)
  長田直樹
- Organizer
  日本進化学会第25回沖縄大会
- Data Source
  KAKENHI-PROJECT-23K23970
[Presentation] Hybrids meet in Japan: pattern and mode of genomic admixture between subspecies of wild house mice (Mus musculus) in East Asia2023
- Author(s)
  Kazumichi Fujiwara, Shunpei Kubo, Tomoki Yano, Toshinori Endo, Toyoyuki Takada, Toshihiko Shiroishi, Hitoshi Suzuki, Naoki Osada
- Organizer
  IMGC2023
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ゲノムから探る人類と野生ハツカネズミの歴史2022
- Author(s)
  長田直樹
- Organizer
  日本遺伝学会
- Invited
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ヒグマはどのように分散し，定着したかー全ゲノム解析によるユーラシア内陸部と島嶼のヒグマの移動史ー2022
- Author(s)
  遠藤優，長田直樹，間野勉，Alexei V. Abramov，増田隆一
- Organizer
  日本進化学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ゲノムから探る人類と野生ハツカネズミの歴史2022
- Author(s)
  長田直樹
- Organizer
  第94回日本遺伝学会大会
- Invited
- Data Source
  KAKENHI-PROJECT-23K23970
[Presentation] ニホンザルの分岐年代推定および過去の集団サイズ減少がゲノムに与えた影響の考察2022
- Author(s)
  大倉拓真，遠藤俊徳，長田直樹
- Organizer
  日本分子生物学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 日本産野生ハツカネズミにおける適応進化にかかわるゲノム領域の探索2022
- Author(s)
  久保俊平，藤原一道，遠藤俊徳，鈴木仁，長田直樹
- Organizer
  日本遺伝学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] マダガスカル産野生ハツカネズミの全ゲノム配列を用いた遺伝的背景の解明2022
- Author(s)
  藤原一道，Marie C. Ranorosoa，大舘智志，新井智，佐久間有希，鈴木仁，長田直樹
- Organizer
  日本遺伝学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 日本産野生ハツカネズミにおいて適応的遺伝子侵入を受けたゲノム領域の探索2022
- Author(s)
  久保俊平，藤原一道，遠藤俊徳，鈴木仁，長田直樹
- Organizer
  日本分子生物学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 縮約ゲノム解析による日本産モグラ類（Mogera imaizumii, Mogera wogura）の系統地理学的解析2022
- Author(s)
  角井建，木下豪太，原田正史，佐藤淳，郷康広，辰本将司，三橋れい子，鈴木仁，長田直樹
- Organizer
  日本遺伝学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 集団ゲノム配列解析による東アジアにおける野生ハツカネズミの移住・混合様式の解明2022
- Author(s)
  藤原一道，鈴木仁，長田直樹
- Organizer
  日本進化学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 野生ハツカネズミの全ゲノム集団解析：亜種間比較と移住・混合様式の解明2022
- Author(s)
  藤原一道，鈴木仁，長田直樹
- Organizer
  日本分子生物学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 全ゲノム配列データを用いたユーラシア産ハツカネズミMus musculusの系統解析2021
- Author(s)
  藤原一道, 河合洋介, 森脇和郎, 高田豊行, 城石俊彦, 斎藤成也, 鈴木仁, 長田直樹
- Organizer
  第23回日本進化学会大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 現代・古代人ゲノム情報を用いた日本列島への移住経路と混合様式の推定2021
- Author(s)
  長田直樹
- Organizer
  日本人類遺伝学会第67回大会
- Invited
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] PCA-UMAPを用いた現代および古代東アジア人の集団構造解析2021
- Author(s)
  久保俊平, 遠藤俊徳, 長田直樹
- Organizer
  第23回日本進化学会大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 古代・現代人ゲノムデータをもとにしたヤポネシアへの人類移住経路の考察2021
- Author(s)
  長田直樹
- Organizer
  第75回日本人類学会
- Invited
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Genome-wide genetic diversity of wild house mice across Eurasia2021
- Author(s)
  長田直樹
- Organizer
  Genome Concept Centennial Conference
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ゲノム配列データからヤポネシア人の起源について考える2020
- Author(s)
  長田直樹
- Organizer
  第22回日本進化学会オンライン大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] マカク属7種のゲノム解析による進化モデルの構築2020
- Author(s)
  長田直樹，松平一成，濱田穣，Malaivijitnond Suchinda
- Organizer
  第36回日本霊長類学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ハツカネズミ（Mus musculus）亜種を用いた全ゲノム集団解析ハツカネズミ（Mus musculus）亜種を用いた全ゲノム集団解析2019
- Author(s)
  藤原一道，河合洋介，斎藤成也，長田直樹，鈴木仁
- Organizer
  第91回日本遺伝学会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Temporal change of protein stability in human mitochondria during out-of-Africa migration2019
- Author(s)
  藤原一道，里村和浩，遠藤俊徳，長田直樹
- Organizer
  日本進化学会第21回大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ヒトゲノムの多様性をどのように解析するのか2019
- Author(s)
  長田直樹
- Organizer
  BI人材育成講座
- Invited
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Genetic diversity of wild house mice (Mus musculus) using whole-genome sequences of multiple samples2019
- Author(s)
  藤原一道，長田直樹，鈴木仁
- Organizer
  日本進化学会第21回大会
- Invited
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Analysis of Mutations and Protein Stability on Human Mitochondrial DNA Haplogroups2019
- Author(s)
  Kazumichi Fujiwara, Toshinori Endo, Naoki Osada
- Organizer
  SMBE 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Big data in biology: perspectives of genomic diversity studies2019
- Author(s)
  Naoki Osada
- Organizer
  Winter International Symposium on Big-Data, Cybersecurity and IoT
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] The negative selection pressure on autosomal recessive congenital ichthoyosis is weaker in African population2019
- Author(s)
  東野俊英，長田直樹
- Organizer
  日本進化学会第21回大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ソフトウェア講習2019
- Author(s)
  長田直樹
- Organizer
  第3回木村資生記念進化学セミナー
- Invited
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Hybrid type of nuclear and plastid DNAs suggests the hypothesis for ancient propagation of American bottle gourd (Lagenaria siceraria)2018
- Author(s)
  Dai Watabe, Hiroshi Yuasa, Naoki Osada, Kazuhiro Satomura, Toshinori endo
- Organizer
  SMBE2018
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Search for the factors related to HCV replication in the HuH-7 cell line lineages2018
- Author(s)
  Masaki Kawamoto, Toshinori Endo, Masayoshi Fukasawa, Kentaro Hanada, Naoki Osada
- Organizer
  SMBE2018
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Compensatory back mutations in mitochondrial genome of primates2018
- Author(s)
  Kazuhiro Satomura, Naoki Osada, Toshinori Endo
- Organizer
  SMBE2018
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ミトコンドリアDNAハプログループに注目した，ヒトミトコンドリアタンパク質複合体IVにおける突然変異とタンパク質構造安定性に関する研究2018
- Author(s)
  藤原一道，遠藤俊徳，長田直樹
- Organizer
  第72回日本人類学会大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Understanding the relationship among the structural and functional properties of amino acid changes to predict the effect of mutations on human beta globin gene2018
- Author(s)
  Sangeetha Udani Ratnayake, Toshinori Endo, Naoki Osada
- Organizer
  第90回日本遺伝学会大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] Predicting disease causality of mutations in human beta globin gene2018
- Author(s)
  Sangeetha Udani Ratnayake, Toshinori Endo, Naoki Osada
- Organizer
  SMBE2018
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 霊長類ミトコンドリア遺伝子における多重置換に対する自然選択2018
- Author(s)
  里村和浩，長田直樹，遠藤俊徳
- Organizer
  第90回日本遺伝学会大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 性による移住率の偏りをゲノムデータから推定する2018
- Author(s)
  長田直樹
- Organizer
  第72回日本人類学会大会
- Invited
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] ミトコンドリアタンパク質複合体IVでの突然変異とそのタンパク質の構造安定性が与える影響について2018
- Author(s)
  藤原一道，遠藤俊徳，長田直樹
- Organizer
  第90回日本遺伝学会大会
- Data Source
  KAKENHI-PLANNED-18H05511
[Presentation] 旧世界ザルにおけるサルレトロウィルスの内在化に関する進化系統解析2016
- Author(s)
  池田昌輝，遠藤俊徳，長田直樹
- Organizer
  第32回日本霊長類学会大会
- Place of Presentation
  鹿児島大学
- Year and Date
  2016-07-16
- Data Source
  KAKENHI-PROJECT-26440202
[Presentation] キイロショウジョウバエ自然集団由来のアリルサンプルを用いたトランスクリプトーム解析2016
- Author(s)
  長田直樹，宮城竜太郎，高橋文
- Organizer
  日本遺伝学会第88回大会
- Place of Presentation
  日本大学国際関係各部三島駅北口校舎
- Year and Date
  2016-09-09
- Data Source
  KAKENHI-PROJECT-26440202
[Presentation] アリル特異的遺伝子発現の定量によるキイロショウジョウバエ（Drosophila melanogaster）の逆交雑における遺伝子発現変化の原因究明2016
- Author(s)
  高田恭彰，高橋文，宮城竜太郎，遠藤俊徳，長田直樹
- Organizer
  日本遺伝学会第88回大会
- Place of Presentation
  日本大学国際関係各部三島駅北口校舎
- Year and Date
  2016-09-09
- Data Source
  KAKENHI-PROJECT-26440202
[Presentation] Population genomics of non-human primates: a case of Mauritian cynomolgus macaques (Macaca fascicularis). Naoki Osada, Soichi Sakurai2016
- Author(s)
  Osada N.
- Organizer
  5th Asian Primate Symposium
- Place of Presentation
  Sri Jayewardenepura, Sri-Lanka
- Year and Date
  2016-10-20
- Data Source
  KAKENHI-PROJECT-26251040
[Presentation] Revisiting the relationship between evolutionary conservation and disease causality: a case study of beta globin gene2016
- Author(s)
  Sageetha Ratnayake, Toshinori Endo, Naoki Osada
- Organizer
  日本遺伝学会第88回大会
- Place of Presentation
  日本大学国際関係各部三島駅北口校舎
- Year and Date
  2016-09-07
- Data Source
  KAKENHI-PROJECT-26440202
[Presentation] モーリシャス島産カニクイザルの24個体の全ゲノム配列の解析2016
- Author(s)
  櫻井聡一，遠藤俊徳，長田直樹
- Organizer
  日本進化学会第18回大会
- Place of Presentation
  東京工業大学大岡山キャンパス
- Year and Date
  2016-08-25
- Data Source
  KAKENHI-PROJECT-26440202
[Presentation] ショウジョウバエ自然集団における体色多型を生み出すメラニン合成遺伝子群のcis発現量解2015
- Author(s)
  宮城竜太郎、秋山礼良、長田直樹、高橋文
- Organizer
  日本進化学会第17回東京大会
- Place of Presentation
  東京
- Year and Date
  2015-08-20
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] モーリシャス島産カニクイザルの全ゲノムシークエンス解析2015
- Author(s)
  長田直樹、Hettiarachchi Nilmini、Babarinde Isaac Adeyemi、斎藤成也、Blancher Antoine
- Organizer
  第31回日本霊長類学会大会
- Place of Presentation
  京都
- Year and Date
  2015-07-18
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Complex cis-regulatory polymorphisms in ebony and tan underlying standing pigmentation variation in Drosophila melanogaster.2015
- Author(s)
  Ryutaro Miyagi, Naoki Osada, Aya Takahashi
- Organizer
  International Symposium: "Establishing Next-Generation Genetics"
- Place of Presentation
  Nara
- Year and Date
  2015-05-28
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] モーリシャス島産カニクイザルの全ゲノムシークエンス解析2015
- Author(s)
  長田直樹，Hettiarachchi Nilmini， Babarinde Isaac Adeyemi，斎藤成也，Blancher Antoine
- Organizer
  第31回日本霊長類学会大会
- Place of Presentation
  京都大学吉田キャンパス
- Year and Date
  2015-07-19
- Data Source
  KAKENHI-PROJECT-26440202
[Presentation] Genetic architecture of gene expression variation in fruit flies.2015
- Author(s)
  長田直樹
- Organizer
  日独先端科学シンポジウム
- Place of Presentation
  京都
- Year and Date
  2015-10-02
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Quantification of cis-regulatory variation in Drosophila melanogaster.2015
- Author(s)
  Naoki Osada, Ryutaro Miyagi, Aya Takahashi
- Organizer
  International Symposium: "Establishing Next-Generation Genetics"
- Place of Presentation
  Nara
- Year and Date
  2015-05-28
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] ボトルネックがゲノムに与える現象の解析：モーリシャス産カニクイザルを例に2015
- Author(s)
  長田直樹
- Organizer
  遺伝研研究集会「ビッグデータ時代の分子進化」
- Place of Presentation
  三島
- Year and Date
  2015-06-27
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] ショウジョウバエ自然集団における体色多型を生み出すメラニン合成遺伝子群のcis発現量解析2014
- Author(s)
  宮城竜太郎，長田直樹，高橋文
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜
- Year and Date
  2014-09-18
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 集団遺伝学データ解析：ABCのABC2014
- Author(s)
  長田直樹
- Organizer
  ゲノム多様性データの統計解析ワークショップ
- Place of Presentation
  福岡
- Year and Date
  2014-12-05
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 木村先生の研究に関連した、私の二つの研究トピック: 優性度による選択圧の違いと補完的進化2014
- Author(s)
  長田直樹
- Organizer
  木村資生博士生誕90周年記念シンポジウム
- Place of Presentation
  三島
- Year and Date
  2014-11-14
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] ショウジョウバエ自然集団における体色多型を生み出すメラニン合成遺伝子群のcis発現量解析2014
- Author(s)
  宮城竜太郎，長田直樹，高橋文
- Organizer
  日本進化学会第16回大阪大会
- Place of Presentation
  高槻
- Year and Date
  2014-08-22
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Challenge of population genomics in non-model organisms2014
- Author(s)
  Naoki Osada
- Organizer
  Frontiers in Genomic Research, National Chen-Kung University
- Place of Presentation
  Tainan, Taiwan
- Year and Date
  2014-12-02
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Finding the factors of reduced genetic diversity on X chromosomes of Macaca fascicularis2013
- Author(s)
  Naoki Osada, Shigeki Nakagome, Shuhei Mano, Yosuke Kameoka, Ichiro Takahashi, Keiji Terao
- Organizer
  SMBE2013
- Place of Presentation
  Chicago, USA
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] 51. キイロショウジョウバエにおける集団内でのcisおよびtrans遺伝子発現変異の定量2013
- Author(s)
  長田直樹，宮城竜太郎，高橋文
- Organizer
  日本遺伝学会
- Place of Presentation
  慶應大学日吉キャンパス
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] 霊長類のゲノム進化2013
- Author(s)
  長田直樹
- Organizer
  日本人類学会
- Place of Presentation
  国立科学博物館筑波研究施設
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] ショウジョウバエ自然集団内アレルサンプルにおけるドーパミン合成遺伝子群の発現解析2013
- Author(s)
  宮城竜太郎, 長田直樹, 高橋文
- Organizer
  日本遺伝学会第85回大会
- Place of Presentation
  横浜
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Expression variation analyses of the dopamine biosynthesis pathway genes within Drosophila melanogaster population using Fluidigm 48.48 Access Array system.2013
- Author(s)
  Miyagi R., Osada N., Takahashi A.
- Organizer
  SMBE 2013
- Place of Presentation
  シカゴ
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 霊長類のゲノム進化2013
- Author(s)
  長田直樹
- Organizer
  日本人類学会
- Place of Presentation
  つくば
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] キイロショウジョウバエにおける集団内でのcisおよびtrans遺伝子発現変異の定量2013
- Author(s)
  長田直樹, 宮城竜太郎, 高橋文
- Organizer
  日本遺伝学会第85回大会
- Place of Presentation
  横浜
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] キイロショウジョウバエにおける集団内でのcis およびtrans 遺伝子発現変異の定量2013
- Author(s)
  長田直樹, 宮城竜太郎, 高橋文
- Organizer
  日本遺伝学会
- Place of Presentation
  慶応大学日吉キャンパス
- Year and Date
  2013-09-20
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] 帰無モデルとしての中立説と歴史推定2013
- Author(s)
  長田直樹
- Organizer
  統計数理研究所研究集会　ゲノム多様性のデータ解析
- Place of Presentation
  東京
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Evolution of rice photoperiod genes2013
- Author(s)
  Osada, N.
- Organizer
  NIG collaborative research meeting: Evolutionary Genetics and Proteomics of Natural Resources in Asia
- Place of Presentation
  三島
- Year and Date
  2013-02-04
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Dissecting regulatory mechanisms of transcriptome variation in Drosophila melanogaster2013
- Author(s)
  Naoki Osada
- Organizer
  ISEGB2013
- Place of Presentation
  Chung-Hsing University, Taichung, Taiwan
- Year and Date
  2013-11-08
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] ゲノム情報を用いた集団の歴史の推定：霊長類や植物の例2012
- Author(s)
  長田直樹
- Organizer
  統計数理研究所研究集会：生物集団に関する遺伝データと集団遺伝学
- Place of Presentation
  立川
- Year and Date
  2012-08-30
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Inferring natural selection by stratifying a single genome sequence2012
- Author(s)
  Naoki Osada
- Organizer
  SMBE2012
- Place of Presentation
  Dublin, Ireland
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Inferring natural selection by stratifying a single genome sequence.2012
- Author(s)
  Osada, N.
- Organizer
  SMBE2012
- Place of Presentation
  Dublin, Ireland
- Year and Date
  2012-06-23
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Compensatory Evolution between Mitochondrial and Nuclear Genomes2012
- Author(s)
 Osada, N.
- Organizer
 The 8^<th> Okazaki Biological Conference
- Place of Presentation
 基礎生物学研究所(岡崎市)(招待講演)
- Year and Date
 2012-03-20
- Data Source
 KAKENHI-PLANNED-23113008
[Presentation] Compensatory Evolution between Mitochondrial and Nuclear Genomes2012
- Author(s)
 Osada, N.
- Organizer
 The 8^<th> Okazaki Biological Conference
- Place of Presentation
 基礎生物学研究所(岡崎市)
- Year and Date
 2012-03-20
- Data Source
 KAKENHI-PROJECT-22687021
[Presentation] ゲノムの分岐パターンから探る-歴史，種分化，適応2012
- Author(s)
  長田直樹
- Organizer
  みちのく進化生物セミナー
- Place of Presentation
  仙台
- Year and Date
  2012-10-19
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Inference of population history from genomic data.2012
- Author(s)
  Osada, N.
- Organizer
  First Arabidopsis Symposium
- Place of Presentation
  Tainan, Taiwan
- Year and Date
  2012-09-24
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Ecological and Evolutionary Genomics of non-model organisms in Asia2012
- Author(s)
  Osada, N.
- Organizer
  CKJ meeting: Genomics, Proteomics, and Bioinformatics with the Asian Perspective
- Place of Presentation
  三島
- Year and Date
  2012-12-11
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 実験用霊長類のゲノムとその多様性2012
- Author(s)
  長田直樹
- Organizer
  第8回霊長類医科学研究フォーラム
- Place of Presentation
  つくば
- Year and Date
  2012-11-29
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 霊長類でのX染色体と常染色体との遺伝的多様性の比について2012
- Author(s)
  長田直樹
- Organizer
  第66回日本人類学会
- Place of Presentation
  横浜
- Year and Date
  2012-11-02
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Inference of population history using a single genome data2011
- Author(s)
  Osada, N.
- Organizer
  日本分子生物学会,第34回大会
- Place of Presentation
  パシフィコ横浜(横浜市)
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 霊長類の中のヒト:ゲノム多様性の種間比較2011
- Author(s)
  長田直樹
- Organizer
  遺伝研共同研究集会:ヒト形質のゲノム発掘による新しい進化人類学の創成
- Place of Presentation
  国立遺伝学研究所(三島市)
- Year and Date
  2011-07-01
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 機能喪失とCpGサイトの崩壊による旧世界ザルCYP1A2遺伝子の高い遺伝的多様性2011
- Author(s)
  長田直樹, 宇野泰広
- Organizer
  日本遺伝学会,第83回大会
- Place of Presentation
  京都大学(京都市)
- Year and Date
  2011-09-22
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Genetic diversity and population history of macaque monkeys2011
- Author(s)
  Osada, N.
- Organizer
  Genomic Conservation and Diversity of Organisms : Beyond the NGS time of Life Science
- Place of Presentation
  Tainan, Taiwan
- Year and Date
  2011-12-09
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 霊長類の中のヒト:ゲノム多様性の種間比較2011
- Author(s)
  長田直樹
- Organizer
  遺伝研共同研究集会:ヒト形質のゲノム発掘による新しい進化人類学の創成
- Place of Presentation
  国立遺伝学研究所(三島市)
- Year and Date
  2011-07-01
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Compensatory evolution between mitochondrial and nuclear genomes : evidence from primate respiratory chain complex genes2011
- Author(s)
  Naoki Osada, Hiroshi Akashi
- Organizer
  SMBE2011
- Place of Presentation
  Kyoto, Japan
- Year and Date
  2011-07-28
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] 多座位データを用いたゲノムヒストリーの推定2011
- Author(s)
  長田直樹
- Organizer
  統計数理研究所共同利用研究集会
- Place of Presentation
  統計数理研究所(立川市)
- Year and Date
  2011-12-19
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] 多座位データを用いたゲノムヒストリーの推定2011
- Author(s)
  長田直樹
- Organizer
  統計数理研究所共同利用研究集会
- Place of Presentation
  統計数理研究所(立川市)
- Year and Date
  2011-12-19
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] 機能喪失とCpG サイトの崩壊による旧世界ザルCYP1A2 遺伝子の高い遺伝的多様性2011
- Author(s)
  長田直樹, 宇野泰広
- Organizer
  第83回日本遺伝学会
- Place of Presentation
  京都大学
- Year and Date
  2011-09-22
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] メタゲノム解析とその応用2011
- Author(s)
  長田直樹
- Organizer
  メタゲノム解析を利用した下水道情報網基盤構築に関する研究集会
- Place of Presentation
  諏訪市
- Year and Date
  2011-11-27
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Compensatory evolution between mitochondrial and nuclear genomes : evidence from primate respiratory chain complex genes2011
- Author(s)
  Osada, N., Akashi, H.
- Organizer
  SMBE2011
- Place of Presentation
  京都大学(京都市)
- Year and Date
  2011-07-27
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Inference of population history using a single genome data2011
- Author(s)
  Naoki Osada
- Organizer
  第34回日本分子生物学会
- Place of Presentation
  パシフィコ横浜
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] 機能喪失とCpGサイトの崩壊による旧世界ザルCYP1A2遺伝子の高い遺伝的多様性2011
- Author(s)
  長田直樹, 宇野泰広
- Organizer
  日本遺伝学会,第83回大会
- Place of Presentation
  京都大学(京都市)
- Year and Date
  2011-09-22
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Inference of population history using a single genome data2011
- Author(s)
  Osada, N.
- Organizer
  日本分子生物学会,第34回大会
- Place of Presentation
  パシフィコ横浜(横浜市)
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Compensatory evolution between mitochondrial and nuclear genomes : evidence from primate respiratory chain complex genes2011
- Author(s)
  Osada, N., Akashi, H.
- Organizer
  SMBE2011
- Place of Presentation
  京都大学(京都市)
- Year and Date
  2011-07-27
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Genetic diversity and population history of macaque monkeys2011
- Author(s)
  Osada, N.
- Organizer
  Genomic Conservation and Diversity of Organisms : Beyond the NGS time of Life Science
- Place of Presentation
  Tainan, Taiwan
- Year and Date
  2011-12-09
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] メタゲノム解析とその応用2011
- Author(s)
  長田直樹
- Organizer
  メタゲノム解析を利用した下水道情報網基盤構築に関する研究集会
- Place of Presentation
  諏訪市
- Year and Date
  2011-11-27
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Population Genetics of Non-human Primates : How Are We Diverse?2010
- Author(s)
  Naoki Osada
- Organizer
  International Primatoiogical Society Congress
- Place of Presentation
  京都大学
- Year and Date
  2010-09-13
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] ミトコンドリア・核遺伝子間の弱有害補完モデル:霊長類COX遺伝子群の進化を例に2010
- Author(s)
  長田直樹, 明石裕
- Organizer
  第90回日本遺伝学会
- Place of Presentation
  北海道大学
- Year and Date
  2010-09-21
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] マルチローカスデータを用いた進化生態学研究について2010
- Author(s)
  長田直樹
- Organizer
  第12回日本進化学会
- Place of Presentation
  東京工業大学
- Year and Date
  2010-08-04
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Population Genetics of Non-human Primates : How AreWe Diverse?2010
- Author(s)
  Naoki Osada
- Organizer
  International Primatological Society Congress
- Place of Presentation
  Kyoto, Japan
- Year and Date
  2010-09-13
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] ミトコンドリア・核遺伝子間の弱有害補完モデル : 霊長類COX 遺伝子群の進化を例に2010
- Author(s)
  長田直樹, 明石裕
- Organizer
  第90回日本遺伝学会
- Place of Presentation
  北海道大学
- Year and Date
  2010-09-22
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] ヒトゲノム中の塩基置換多型と疾患関連遺伝子について2008
- Author(s)
  長田直樹
- Organizer
  第62回日本人類学会
- Place of Presentation
  愛知学院大学
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] 系統特異的重複および欠失によるケモカイン遺伝子ファミリーの急速な進化2008
- Author(s)
  野見山尚之, 長田直樹, 楠田潤, 義江修
- Organizer
  日本分子生物学会
- Place of Presentation
  兵庫県神戸市神戸ポートピアホテル
- Year and Date
  2008-12-09
- Data Source
  KAKENHI-PROJECT-19510197
[Presentation] カニクイザル骨髄,脾臓,膵臓由来cDNAライブラリーの解析2008
- Author(s)
  長田直樹,平田誠,田沼玲子,亀岡洋祐,高橋一郎
- Organizer
  第31回日本分子生物学会
- Place of Presentation
  神戸国際展示場
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] 実験用霊長類(マカク属)間における遺伝子交雑と種分化について2008
- Author(s)
  長田直樹
- Organizer
  第80回日本遺伝学会
- Place of Presentation
  名古屋大学工学部
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] 実験用マカク間における遺伝的分化と交雑についてのゲノム解析2008
- Author(s)
  長田直樹, 亀岡洋祐, 高橋一朗, 寺尾恵治
- Organizer
  第24回日本霊長類学会
- Place of Presentation
  明治学院大学
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] ゲノムワイドな淘汰圧の検出と遺伝子発現パターンについて2007
- Author(s)
  長田直樹
- Organizer
  第9回日本進化学会
- Place of Presentation
  京都大学
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] カニクイザル由来cDNAデータベースの構築、アカゲザルとの比較解析2007
- Author(s)
  長田直樹、橋本雄之、平田誠、田沼玲子、亀岡洋祐、楠田潤
- Organizer
  第23回日本霊長類学会
- Place of Presentation
  滋賀県立大学
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] ゲノムワイドな淘汰圧の検出と遺伝子発現パターンについて2007
- Author(s)
  長田直樹
- Organizer
  第9回日本進化学会大会
- Place of Presentation
  京都大学
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] マカク属特異的な新規ケモカイン遺伝子CXCL1L2007
- Author(s)
  野見山尚之, 長田直樹, 義江修, 楠田潤
- Organizer
  日本分子生物学会
- Place of Presentation
  神奈川県横浜市パシフィコ横浜
- Year and Date
  2007-12-11
- Data Source
  KAKENHI-PROJECT-19510197
[Presentation] カニクイザル由来cDNAデータベースの構築、アカゲザルとの比較解栃2007
- Author(s)
  長田直樹、橋本雄之、平田誠、田沼玲子、亀岡洋祐、楠田潤
- Organizer
  第23回日本霊長類学会大会
- Place of Presentation
  滋賀県立大学
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] カニクイザルcDNAライブラリーコレクションの拡充とその解祈2007
- Author(s)
  長田直樹, 橋本雄之, 楠田潤, 亀岡洋祐, 田沼玲子, 平田誠, 高橋一朗
- Organizer
  第30回日本分子生物学会大会
- Place of Presentation
  パシフィコ横浜
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] ヒトゲノム中での遺伝子発現パターンと淘汰圧との関係2007
- Author(s)
  長田直樹
- Organizer
  第79回日本遺伝学会
- Place of Presentation
  岡山大学
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] カニクイザルcDNAライブラリーコレクションの拡充とその解析2007
- Author(s)
  長田直樹, 橋本雄之, 楠田潤, 亀岡洋祐, 田沼玲子, 平田誠, 高橋一朗
- Organizer
  第30回日本分子生物学会
- Place of Presentation
  パシフィコ横浜
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] ヒトゲノム中での遺伝子発現パターンと淘汰圧との関係2007
- Author(s)
  長田直樹
- Organizer
  第79回日本遺伝学会大会
- Place of Presentation
  犬山国際センター
- Data Source
  KAKENHI-PROJECT-19770073
[Presentation] 霊長類でのX染色体と常染色体との遺伝的多様性の比について
- Author(s)
  長田直樹
- Organizer
  日本人類学会
- Place of Presentation
  慶応大学日吉キャンパス
- Invited
- Data Source
  KAKENHI-PROJECT-22687021
[Presentation] Dissecting regulatory mechanisms of transcriptome variation in Drosophila melanogaster.
- Author(s)
  Osada N.
- Organizer
  ISEGB2013
- Place of Presentation
  Taichung, Taiwan
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Dissecting regulatory mechanisms of transcriptome variation in Drosophila melanogaster.
- Author(s)
  Osada N.
- Organizer
  TIGP retreat
- Place of Presentation
  Taipei, Taiwan
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] ヒトゲノムの進化における自然選択と遺伝的浮動の役割
- Author(s)
  長田直樹
- Organizer
  インシリコ・メガバンク研究会
- Place of Presentation
  仙台
- Invited
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Finding evidence for weak compensatory evolution.
- Author(s)
  Osada N.
- Organizer
  Evolution of Junk DNAs
- Place of Presentation
  三島
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Allele-specific gene expression among Drosophila melanogaster hybrid lines revealed abundant cis-regulatory mutations.
- Author(s)
  長田直樹
- Organizer
  ゲノム進化分野におけるビッグデータ情報解析の新展開
- Place of Presentation
  東京
- Data Source
  KAKENHI-PLANNED-23113008
[Presentation] Finding evidence for weak compensatory evolution
- Author(s)
  Osada N.,Akashi H.
- Organizer
  SMBE Satellite Meeting/NIG International Workshop
- Place of Presentation
  三島
- Invited
- Data Source
  KAKENHI-PLANNED-23113008

1. SETOYAMA Chiaki (60040250)

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2. SAITOU NARUYA (30192587)

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3. 河合洋介 (30435515)

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4. NOMIYAMA Hisayuki (00156225)

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5. Takahashi Aya (90370121)

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6. 池尾一穂 (20249949)

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7. 太田聡史 (30391890)

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8. 古賀章彦 (80192574)

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9. 北野誉 (90400564)

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10. 藤尾慎一郎 (30190010)

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11. 木部暢子 (30192016)

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12. 篠田謙一 (30131923)

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13. 遠藤光暁 (30176804)

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14. 鈴木仁 (40179239)

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18. 蒲池浩文 (60374237)

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19. 神山俊哉 (80322816)

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20. 折茂達也 (80711861)

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21. 山田康弘 (40264270)

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22. 太田博樹 (40401228)

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23. 日下宗一郎 (70721330)

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38. YAMAJI Toshiyuki

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44. 齋藤恭子

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Osada Naoki 長田 直樹

OSADA Naoki 長田 直樹

Research Projects

Research Products

Co-Researchers

Integrative Bioarcheology: Reconstruction of Human Prehistory around the Japanese Archipelago

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Exploration of the impact of prehistoric human activities on animal communities and environmental conditionsPrincipal Investigator

Principal Investigator

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Review Section

Research Institution

Thousands of adaptive changes emerging from thousands of genomes within a species

Principal Investigator

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血中exosome内circRNA発現解析による膵癌の診断・予後関連マーカー探索

Principal Investigator

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Research Institution

Comprehensive search and population genetic analysis of virus-like sequences in human genomesPrincipal Investigator

Principal Investigator

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Review Section

Research Institution

Origin and formation of Yaponesians based on genome sequences

Principal Investigator

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Review Section

Research Institution

Deciphering Origin and Establishment of Japonesians mainly based on genome sequence dataPrincipal Investigator

Principal Investigator

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Review Section

Research Institution

Integrative study of nucleotide sequence evolution using primate genomes as model

Principal Investigator

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Theoretical and empirical studies for compensatory molecular evolutionPrincipal Investigator

Principal Investigator

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Analyses of behavior incompatibility triggered by expression changes of pigmentation genes

Principal Investigator

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Research Institution

Analysis of gene expression network of natural and artificial allotetraploids using next generation sequencersPrincipal Investigator

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Research Institution

Birth and Death of Chemokine Family Genes and Gain of Novel Functions

Principal Investigator

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Research Institution

Inter- and Intra-specific Genetic Diversity in Genus Macaca.Principal Investigator

Principal Investigator

Project Period (FY)

Osada Naoki 長田直樹

OSADA Naoki 長田直樹

[Book] 進化で読み解く　バイオインフォマティクス入門2019

[Book] ヒトは病気とともに進化した　太田博樹・長谷川眞理子編著　第二章2013

[Book] 遺伝子図鑑　「遺伝子図鑑」編集委員会編　第七章1,2,11節2013