Noguchi Hideki 野口英樹

… Alternative Names

野口英樹

NOGUCHI Hideki 野口英樹

野口秀樹ノグチヒデキ

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Researcher Number	50333349
Other IDs
Affiliation (Current)	2025: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任教授 2025: 国立遺伝学研究所, 先端ゲノミクス推進センター, 特任教授
Affiliation (based on the past Project Information) *help	2021 – 2024: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任教授 2021: 情報・システム研究機構, データサイエンス共同利用基盤施設, 特任教授 2018: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任教授 2012 – 2015: 国立遺伝学研究所, 先端ゲノミクス推進センター, 特任准教授 2010 – 2011: 東京工業大学, 大学院・生命理工学研究科, 特任准教授 … More 2006: 東京大学, 大学院新領域創成科学研究科, 研究拠点形成特任研究員 2005: 東京大学, 大学院・新領域創成科学研究科, 研究拠点形成特任研究員 2004: 独立行政法人理化学研究所, シーケンス技術チーム, 研究員 2003: 独立行政法人理化学研究所, ゲノム情報比較解析研究チーム, 研究員 2002: 理化学研究所, ゲノム情報比較解析研究チーム, 研究員 Less
Review Section/Research Field	Principal Investigator Applied genomics / Biological Sciences Except Principal Investigator Biological Sciences / Basic Section 42040:Laboratory animal science-related / Genome biology / 基礎ゲノム科学 / Genome biology
Keywords	Principal Investigator 遺伝子予測 / 生物情報科学 / メタゲノム / バイオインフォマティクス / 比較ゲノム解析 / プロモータ Except Principal Investigator バイオインフォマティクス / ChIP-chip / メタゲノム / エピゲノム … More / リシーケンシング / 次世代DNAシーケンサー / 6 / Smc5 / 染色体 / 細胞周期 / DNAチップ / 染色体複製 / トランスクリプトーム解析 / 次世代DNAシークエンサー / 嘔吐中枢 / スンクス / 術後悪心嘔吐 / スーパーコンピュータ / 空間的オミックス解析 / RNA解析 / ゲノム・メタゲノム / 次世代シーケンサー / シングルセル解析 / オミックス解析 / ゲノム / ゲノムアノテーション / ゲノム多型 / ゲノムアッセンブル / スーパーコンピューター / メタゲノム解析 / 1細胞解析 / RNA-Seq / 新規ゲノム配列決定 / 全ゲノム解析 / 新規変異 / 個体ゲノム / ゲノム科学 / ゲノム構造 / ゲノム変異 / ゲノム解析技術 / 次世代DNAシーケンサ / インフォームドコンセント / GWAS / 個人ゲノム / de novo配列決定 / ChIP-seq / RNA-seq / chromatin immuno-precipitation / DNA chip / chromosome / cell cycle / cohesin / DNA array / 染色体分配 / DNAchip / 染色体代謝 / ゲノム解析 / レプリコン構造 / 複製制御 / 染色体動態 / 染色体構造 / 染色体免疫沈降 / コヒーシン / DNAアレイ / 遺伝子予測 / アセンブラ / ゲノム情報解析 / ゲノム情報 / アノテーション / 遺伝子発見 / プロファイル / アラインメント / バイオィンフォマティクス / miRNA / プロモーター / 配列解析 / ゲノム生物学 / ゲノム情報処理 / バイオインフォマティックス / 隠れマルコフモデル / 保存領域 / 選択的スプライシング / シークエンシング / 新規遺伝子 / 比較ゲノム / RAD53 / 細胞周期チェックポイント / マルチレプリコン / 時間的制御 / 染色体構築 / ヌクレオソーム / 減数分裂 / 転写 / DNA-蛋白相互作用 / 免疫沈降 / 第六染色体 / 複製開始点 / 複製開始 / 複製開始因子 / DNA複製 / チェックポイント制御 / 染色体ダイナミクス / MRC1 / TOF1 / 複製停止 / 複製チェックポイント Less

Platform for Advanced Genome Science
- Principal Investigator
  
  黒川顕
- Project Period (FY)
  2022 – 2027
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (platforms for Advanced Technologies and Research Resources)
- Research Institution
  National Institute of Genetics
Suncus Research for Elucidating the Genetic Mechanism in Postoperative Nausea and Vomiting
- Principal Investigator
  
  杉野繁一
- Project Period (FY)
  2021 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 42040:Laboratory animal science-related
- Research Institution
  Tohoku University
Platform for Advanced Genome Science
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2016 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources
- Research Institution
  National Institute of Genetics
Development of the integrated technologies to analyze genomic bases of individuality
- Principal Investigator
  
  Fujiyama Asao
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Genome biology
- Research Institution
  National Institute of Genetics
Development of denovo genome/gene assembler for highly heterozygous samples from NGS sequence data
- Principal Investigator
  
  ITOH TAKEHIKO
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Genome biology
- Research Institution
  Tokyo Institute of Technology
Gene prediction and classification on the microbial metagenomes including fungal speciesPrincipal Investigator
- Principal Investigator
  
  NOGUCHI Hideki
- Project Period (FY)
  2010 – 2011
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Applied genomics
- Research Institution
  Tokyo Institute of Technology
Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2010 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Research Institution
  National Institute of Genetics
Comparative analysis of large scale genome data and knowledge discovery
- Principal Investigator
  
  YADA Tetsushi
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Kyoto University
比較ゲノム解析および遺伝子発現プロファイルに基づいたプロモータ情報構造の解析Principal Investigator
- Principal Investigator
  
  野口英樹
- Project Period (FY)
  2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
The systematic approach for the understanding of dynamic aspects of chromosome VI of S.cerevisiae
- Principal Investigator
  
  SHIRAHIGE Katsuhiko
- Project Period (FY)
  2003 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  Tokyo Institute of Technology
  The Institute of Physical and Chemical Research
比較ゲノム解析をベースとした機能領域探索法の開発
- Principal Investigator
  
  TOYODA Atsushi
- Project Period (FY)
  2002
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
真核生物染色体のS期に於ける動態の全て―出芽酵母第六染色体をモデルとして
- Principal Investigator
  
  SHIRAHIGE Katsuhiko
- Project Period (FY)
  1999 – 2003
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
  Nara Institute of Science and Technology

All 2024 2023 2022 2021 2020 2019 2018 2017 2016 2015 2014 2003 Other

All Journal Article Presentation

[Journal Article] Genome assembly of Genji firefly Nipponoluciola cruciata reveals novel luciferase-like luminescent proteins without peroxisome targeting signal2024
- Author(s)
  Fukuta Kentaro、Kato Dai-ichiro、Maeda Juri、Tsuruta Atsuhiro、Suzuki Hirobumi、Nagano Yukio、Tsukamoto Hisao、Niwa Kazuki、Terauchi Makoto、Toyoda Atsushi、Fujiyama Asao、Noguchi Hideki
- Journal Title
  
  DNA Research
  
  Volume: 31 Issue: 2
- DOI
  10.1093/dnares/dsae006
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K05321, KAKENHI-PROJECT-23K21296, KAKENHI-PROJECT-22H04925
[Journal Article] Identification of small-sized intrachromosomal segments at the ends of INV-DUP-DEL patterns2023
- Author(s)
  Shimojima Yamamoto K, Tamura T, Okamoto N, Nishi E, Noguchi A, Takahashi I, Sawaishi Y, Shimizu M, Kanno H, Minakuchi Y, Toyoda A, Yamamoto T
- Journal Title
  
  Journal of Human Genetics
  
  Volume: 68 Issue: 11 Pages: 751-757
- DOI
  10.1038/s10038-023-01181-x
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K07257, KAKENHI-PROJECT-21K07873, KAKENHI-PROJECT-22H04925
[Journal Article] Whole-genome sequencing reveals the molecular implications of the stepwise progression of lung adenocarcinoma2023
- Author(s)
  Haga Y, Sakamoto Y, Kajiya K, Kawai H, Oka M, Motoi N, Shirasawa M, Yotsukura M, Watanabe S, Arai M, Zenkoh J, Shiraishi K, Seki M, Kanai A, Shiraishi Y, Yatabe Y, Matsubara D, Suzuki Y, Noguchi M, Kohno T, Suzuki A.
- Journal Title
  
  Nature Communications
  
  Volume: 14 Issue: 1 Pages: 8375-8375
- DOI
  10.1038/s41467-023-43732-y
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K14469, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H00545, KAKENHI-PROJECT-23K27389, KAKENHI-PROJECT-23K27449
[Journal Article] Transposons contribute to the acquisition of cell type-specific cis-elements in the brain2023
- Author(s)
  Sekine Kotaro、Onoguchi Masahiro、Hamada Michiaki
- Journal Title
  
  Communications Biology
  
  Volume: 6 Issue: 1 Pages: 631-631
- DOI
  10.1038/s42003-023-04989-7
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K06133, KAKENHI-PROJECT-22H04925
[Journal Article] BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state2023
- Author(s)
  Xiao Muran、、、、Yokoyama Akihiko、、、、、Inoue Daichi
- Journal Title
  
  Nature Communications
  
  Volume: 14 Issue: 1 Pages: 1-22
- DOI
  10.1038/s41467-023-44081-6
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22KK0119, KAKENHI-PROJECT-21K08385, KAKENHI-PROJECT-20H03717, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00455, KAKENHI-PROJECT-23K24368
[Journal Article] The 3′ Pol II pausing at replication-dependent histone genes is regulated by Mediator through Cajal bodies’ association with histone locus bodies2022
- Author(s)
  Suzuki Hidefumi、Abe Ryota、Shimada Miho、Hirose Tomonori、Hirose Hiroko、Noguchi Keisuke、Ike Yoko、Yasui Nanami、Furugori Kazuki、Yamaguchi Yuki、Toyoda Atsushi、Suzuki Yutaka、Yamamoto Tatsuro、Saitoh Noriko、Sato Shigeo、Tomomori-Sato Chieri、Conaway Ronald C.、Conaway Joan W.、Takahashi Hidehisa
- Journal Title
  
  Nature Communications
  
  Volume: 13 Issue: 1 Pages: 2905-2905
- DOI
  10.1038/s41467-022-30632-w
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06482, KAKENHI-PROJECT-22K19466, KAKENHI-ORGANIZER-21H05158, KAKENHI-PLANNED-21H05159, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H03182, KAKENHI-PROJECT-20H03520, KAKENHI-PROJECT-21H02405, KAKENHI-PROJECT-20K06893, KAKENHI-PROJECT-21K19356, KAKENHI-PLANNED-18H05531
[Journal Article] Profiling a single-stranded DNA region within an rDNA segment that affects the loading of bacterial condensin2022
- Author(s)
  Koichi Yano、Hideki Noguchi、Hironori Niki
- Journal Title
  
  iScience
  
  Volume: 25 Issue: 12 Pages: 105504-105504
- DOI
  10.1016/j.isci.2022.105504
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-18H02485
[Journal Article] Single-cell transcriptomics of the goldfish retina reveals genetic divergence in the asymmetrically evolved subgenomes after allotetraploidization2022
- Author(s)
  Tetsuo Kon、Kentaro Fukuta、Zelin Chen、Koto Kon-Nanjo、Kota Suzuki、Masakazu Ishikawa、Hikari Tanaka、Shawn M. Burgess、Hideki Noguchi、Atsushi Toyoda、Yoshihiro Omori
- Journal Title
  
  Communications Biology
  
  Volume: 5(1) Issue: 1 Pages: 1404-1404
- DOI
  10.1038/s42003-022-04351-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K24087
[Journal Article] MeCP2 controls neural stem cell fate specification through miR-199a-mediated inhibition of BMP- Smad signaling2021
- Author(s)
  Nakashima H., Tsujimura K., Irie K., Imamura T., Trujillo CA., Ishizu M., Uesaka M., Pan M., Noguchi H., Okata K., Aoyagi K., Ando-Noda T., Okano H., Muotri AR., Nakashima K.
- Journal Title
  
  Cell Reports
- Description
  in press
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] MeCP2 controls neural stem cell fate specification through miR-199a-mediated inhibition of BMP-Smad signaling2021
- Author(s)
  Nakashima Hideyuki、Tsujimura Keita、Irie Koichiro、Imamura Takuya、Trujillo Cleber A.、Ishizu Masataka、Uesaka Masahiro、Pan Miao、Noguchi Hirofumi、Okada Kanako、Aoyagi Kei、Andoh-Noda Tomoko、Okano Hideyuki、Muotri Alysson R.、Nakashima Kinichi
- Journal Title
  
  Cell Reports
  
  Volume: 35 Issue: 7 Pages: 109124-109124
- DOI
  10.1016/j.celrep.2021.109124
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-INTERNATIONAL-16K21734, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-19K16918
[Journal Article] MetaPlatanus: a metagenome assembler that combines long-range sequence links and species-specific features2021
- Author(s)
  Rei Kajitani, Hideki Noguchi, Yasuhiro Gotoh, Yoshitoshi Ogura, Dai Yoshimura, Miki Okuno, Atsushi Toyoda, Tomomi Kuwahara, Tetsuya Hayashi, Takehiko Itoh
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 49 Issue: 22 Pages: e130-e130
- DOI
  10.1093/nar/gkab831
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H03206, KAKENHI-PROJECT-20H04125, KAKENHI-PROJECT-21K19211, KAKENHI-PROJECT-20K15769, KAKENHI-PROJECT-16H06279
[Journal Article] Binding patterns of RNA-binding proteins to repeat-derived RNA sequences reveal putative functional RNA elements2021
- Author(s)
  Onoguchi Masahiro、Zeng Chao、Matsumaru Ayako、Hamada Michiaki
- Journal Title
  
  NAR Genomics and Bioinformatics
  
  Volume: 3 Issue: 3
- DOI
  10.1093/nargab/lqab055
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H05879, KAKENHI-PROJECT-21K06133, KAKENHI-PROJECT-17K20032, KAKENHI-PROJECT-20K15784, KAKENHI-PROJECT-16H06279
[Journal Article] Association analysis of repetitive elements and R-loop formation across species2021
- Author(s)
  Zeng Chao、Onoguchi Masahiro、Hamada Michiaki
- Journal Title
  
  Mobile DNA
  
  Volume: 12 Issue: 1 Pages: 3-3
- DOI
  10.1186/s13100-021-00231-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K15784, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16H05879, KAKENHI-PROJECT-17K20032
[Journal Article] Three genomes in the algal genus Volvox reveal the fate of a haploid sex-determining region after a transition to homothallism2021
- Author(s)
  Kayoko Yamamoto, Takashi Hamaji, Hiroko Kawai-Toyooka, Ryo Matsuzaki, Fumio Takahashi, Yoshiki Nishimura, Masanobu Kawachi, Hideki Noguchi, Yohei Minakuchi, James G. Umen, Atsushi Toyoda, Hisayoshi Nozaki
- Journal Title
  
  The Proceedings of the National Academy of Sciences
  
  Volume: 118 Issue: 21
- DOI
  10.1073/pnas.2100712118
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07510, KAKENHI-PROJECT-19K22446, KAKENHI-PROJECT-18H02460, KAKENHI-PROJECT-20H03299, KAKENHI-PROJECT-20K06692, KAKENHI-PROJECT-20K06766, KAKENHI-PROJECT-21K06294, KAKENHI-PROJECT-16H06279
[Journal Article] The Genetic Basis of Morphological Diversity in Domesticated Goldfish2020
- Author(s)
  Kon Tetsuo、Omori Yoshihiro、Fukuta Kentaro、Wada Hironori、Watanabe Masakatsu、Chen Zelin、Iwasaki Miki、Mishina Tappei、Matsuzaki Shin-ichiro S.、Yoshihara Daiki、Arakawa Jumpei、Kawakami Koichi、Toyoda Atsushi、Burgess Shawn M.、Noguchi Hideki、Furukawa Takahisa
- Journal Title
  
  Current Biology
  
  Volume: 30 Issue: 12 Pages: 2260-2274.e6
- DOI
  10.1016/j.cub.2020.04.034
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K22426, KAKENHI-PROJECT-19K16146, KAKENHI-PROJECT-18H02593, KAKENHI-PROJECT-19H03420, KAKENHI-PROJECT-18J00928, KAKENHI-PROJECT-17H03683, KAKENHI-PROJECT-16H06279
[Journal Article] Exploring the Limits and Causes of Plastid Genome Expansion in Volvocine Green Algae2018
- Author(s)
  Gaouda Hager, Hamaji Takashi, Yamamoto Kayoko, Kawai-Toyooka Hiroko, Suzuki Masahiro, Noguchi Hideki, Minakuchi Yohei, Toyoda Atsushi, Fujiyama Asao, Nozaki Hisayoshi, Smith David Roy
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 10 Issue: 9 Pages: 2248-2254
- DOI
  10.1093/gbe/evy175
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07510, KAKENHI-PROJECT-18J11391, KAKENHI-PROJECT-16H06734, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16H02518
[Journal Article] Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs2018
- Author(s)
  Imamura Katsutoshi、Takaya Akiko、Ishida Yo‐ichi、Fukuoka Yayoi、Taya Toshiki、Nakaki Ryo、Kakeda Miho、Imamachi Naoto、Sato Aiko、Yamada Toshimichi、Onoguchi‐Mizutani Rena、Akizuki Gen、Tanu Tanzina、Tao Kazuyuki、Miyao Sotaro、Suzuki Yutaka、Nagahama Masami、Yamamoto Tomoko、Jensen Torben Heick、Akimitsu Nobuyoshi
- Journal Title
  
  The EMBO Journal
  
  Volume: 37 Issue: 13
- DOI
  10.15252/embj.201797723
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06640, KAKENHI-PROJECT-18K07102, KAKENHI-PROJECT-18K14899, KAKENHI-PROJECT-17J11266, KAKENHI-PROJECT-16H06279
[Journal Article] Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs2018
- Author(s)
  Imamura K, Takaya A, Ishida Y, Fukuoka Y, Taya T, Nakaki R, Kakeda M, Imamachi N, Sato A, Yamada T, Onoguchi-Mizutani R, Akizuki G, Tanu T, Tao K, Miyao S, Suzuki Y, Nagahama M, Yamamoto T, Jensen TH, Akimitsu N.
- Journal Title
  
  EMBO Journal
- Description
  accepted
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Anisogamy evolved with a reduced sex-determining region in volvocine green algae2018
- Author(s)
  Takashi Hamaji, Hiroko Kawai-Toyooka, Haruka Uchimura, Masahiro Suzuki, Hideki Noguchi, Yohei Minakuchi, Atsushi Toyoda, Asao Fujiyama, Shin-ya Miyagishima, James G. Umen, Hisayoshi Nozaki
- Journal Title
  
  Communications Biology
  
  Volume: 1 Issue: 1 Pages: 17-17
- DOI
  10.1038/s42003-018-0019-5
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07510, KAKENHI-PROJECT-16H06734, KAKENHI-PROJECT-15K14580, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16H02518
[Journal Article] Identification of Minimal p53 Promoter Region Regulated by MALAT1 in Human Lung Adenocarcinoma Cells.2018
- Author(s)
  Tano K, Onoguchi-Mizutani R, Yeasmin F, Uchiumi F, Suzuki Y, Yada T, Akimitsu N
- Journal Title
  
  frontiers in Genetics
  
  Volume: なし Pages: 208-208
- DOI
  10.3389/fgene.2017.00208
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06743, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18K14899
[Journal Article] The complete mitogenome and phylogenetic analysis of Japanese firefly ‘Genji Botaru’ Luciola cruciata (Coleoptera : Lampyridae)2017
- Author(s)
  Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
- Journal Title
  
  Mitochondrial DNA Part B
  
  Volume: 2 Issue: 2 Pages: 522-523
- DOI
  10.1080/23802359.2017.1365641
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Direct estimation of de novo mutation rates in a chimpanzee parent-offspring trio by ultra-deep whole genome sequencing2017
- Author(s)
  Tatsumoto Shoji、Go Yasuhiro、Fukuta Kentaro、Noguchi Hideki、Hayakawa Takashi、Tomonaga Masaki、Hirai Hirohisa、Matsuzawa Tetsuro、Agata Kiyokazu、Fujiyama Asao
- Journal Title
  
  Scientific Reports
  
  Volume: 7 Issue: 1 Pages: 13561-13561
- DOI
  10.1038/s41598-017-13919-7
- NAID
  120006358802
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K18630, KAKENHI-INTERNATIONAL-16K21734, KAKENHI-ORGANIZER-16H06524, KAKENHI-PLANNED-16H06531, KAKENHI-PROJECT-15H05709, KAKENHI-PROJECT-16H04849, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16H06283
[Journal Article] The complete mitochondrial genome sequence and phylogenetic analysis of Luciola lateralis, one of the most famous firefly in Japan (Coleoptera : Lampyridae)2017
- Author(s)
  Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
- Journal Title
  
  Mitochondrial DNA Part B
  
  Volume: 2 Issue: 2 Pages: 546-547
- DOI
  10.1080/23802359.2017.1365640
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Genome sequence and analysis of the Japanese morning glory Ipomoea nil.2016
- Author(s)
  Hoshino A, Jayakumar V, Nitasaka E, Toyoda A, Noguchi H, Itoh T, Shin T, Minakuchi Y, Koda Y, Nagano AJ, Yasugi M, Honjo MN, Kudoh H, et al.
- Journal Title
  
  Nature Communications
  
  Volume: 7 Issue: 1 Pages: 132395-132395
- DOI
  10.1038/ncomms13295
- NAID
  120005997914
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26221106, KAKENHI-PROJECT-16H04719, KAKENHI-PROJECT-15K07118, KAKENHI-PROJECT-16H06279
[Journal Article] The Gonium pectorale genome demonstrates cooption of cell cycle regulation during the evolution of multicellularity2016
- Author(s)
  Erik R. Hanschen, Tara N. Marriage, Patrick J. Ferris, Takashi Hamaji, Atsushi Toyoda, Asao Fujiyama, Rafik Neme, Hideki Noguchi, Yohei Minakuchi, Masahiro Suzuki, Hiroko Kawai-Toyooka, David R. Smith, Halle Sparks, Jaden Anderson, Robert Bakaric, Victor Luria, Amir Karger, Marc Kirschner, et al.
- Journal Title
  
  Nature Communications
  
  Volume: 7 Issue: 1 Pages: 11370-11370
- DOI
  10.1038/ncomms11370
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-25891009, KAKENHI-PROJECT-24247042
[Journal Article] Comparative genome and transcriptome analyses of the social amoeba Acytostelium subglobosum that accomplishes multicellular development without germ-soma differentiation.2015
- Author(s)
  Urushihara H, Kuwayama H, Fukuhara K, Itoh T, Kagoshima H, Shin-I T, Toyoda A, Ohishi K, Taniguchi T, Noguchi H, Kuroki Y, Hata T, Uchi K, Mohri K, King JS, Insall RH, Kohara Y, Fujiyama A.
- Journal Title
  
  BMC Genomics
  
  Volume: 16 Issue: 1 Pages: 80-80
- DOI
  10.1186/s12864-015-1278-x
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads.2014
- Author(s)
  R. Kajitani, K. Toshimoto, H. Noguchi, A. Toyoda, Y. Ogura, M. Okuno, M. Yabana, M. Harada, E. Nagayasu, H. Maruyama, Y. Kohara, A. Fujiyama, T. Hayashi and T.Itoh
- Journal Title
  
  Genome Research,
  
  Volume: 24 Issue: 8 Pages: 1384-1384
- DOI
  10.1101/gr.170720.113
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-ORGANIZER-22125001, KAKENHI-PLANNED-22125008, KAKENHI-PROJECT-24310142, KAKENHI-PUBLICLY-25125718, KAKENHI-PROJECT-25250024, KAKENHI-PROJECT-25460542, KAKENHI-PROJECT-221S0002
[Journal Article] S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication pausing complex.2003
- Author(s)
  Y.Katou, Y.Kanoh, M.Bando, H.Noguchi, H.Tanaka, T.Ashikari, K.Sugimoto, K.Shirahige
- Journal Title
  
  Nature 424
  
  Pages: 1078-1083
- Data Source
  KAKENHI-PROJECT-15310136
[Presentation] 個体群動態が語る適応放散 ―ニューカレドニアのシソ科 Oxera 属における種間比較―2024
- Author(s)
  坂野慧悟、池田隆介、河合良弥、伊藤僚祐、野口英樹、寺内真、GILDAS GATEBLE、陶山佳久、井鷺裕司
- Organizer
  第71回日本生態学会大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] The level of bottleneck experienced by endangered green turtles2023
- Author(s)
  Tomoko Hamabata、Satomi Kondo、Kazunari Kameda、Takuya Fukuoka、Katsufumi Sato、Makoto Terauchi、Hideki Noguchi、Masakado Kawata
- Organizer
  第70回日本生態学会大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Mechanisms of CTGF-positive subplate neuron specification during cortical development and evolution2023
- Author(s)
  隈元拓馬、野口友理佳、片山涼香、真田莉花
- Organizer
  Cortical Evolution 2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] マウス多重多倍体化胚を用いた哺乳類個体の多倍体化阻止機構の探索2023
- Author(s)
  今井啓之、松屋純人、宮澤秀幸、野口英樹、加納聖、日下部健
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] CTGF陽性サブプレートニューロンの細胞運命決定のメカニズム2023
- Author(s)
  隈元拓馬、野口友理佳、片山涼香、眞田莉花、丸山千秋
- Organizer
  第46回日本神経科学大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] キンギョのパール鱗変異体をモデルとした鱗形成機構の理解2023
- Author(s)
  松本沙織、黄一丞、湯瑞、伏木宗一郎、村宮一紀、永野敦、野口英樹、福多賢太郎、豊田敦、大森義裕
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] キンギョをモデルとしたメラノフォアの機能を制御する分子メカニズムの解析2023
- Author(s)
  伏木宗一郎、松本沙織、湯瑞、村宮一紀、永野敦、福多賢太郎、野口英樹、豊田敦、大森義裕
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 適応放散を遂げたシソ科 Oxera 属における隠蔽種の進化史推定2023
- Author(s)
  池田隆介、陶山佳久、Gildas GETABLE、寺内真、野口英樹、井鷺裕司
- Organizer
  第70回日本生態学会大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Domestication origin and genetic basis of diverse phenotypes of ornamental medaka strains2023
- Author(s)
  Kon Tetsuo、Tang Rui、Fukuta Kentaro、Fushiki Soichiro、Kon-Nanjo Koto、Noguchi Hideki、Toyoda Atsushi、Naruse Kiyoshi、Omori Yoshihiro
- Organizer
  第46回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Genomic measures relevant to the conservation of green turtles2022
- Author(s)
  Tomoko Hamabata、Satomi Kondo、Kazunari Kameda、Takuya Fukuoka、Katsufumi Sato、Makoto Terauchi、Hideki Noguchi、Masakado Kawata
- Organizer
  Tohoku University - OIST 3rd Joint Workshop on Biodiversity
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] メディエーター複合体による新規の転写スピード調節機構の解明2022
- Author(s)
  鈴木秀文、阿部竜太、嶋田美穂、廣瀬智威、廣瀬博子、野口慶介、池陽子、安井七海、古郡華月、山口雄輝、豊田敦、鈴木穣、山本達郎、斉藤典子、Sato Shigeo、Tomomori-Sato Chieri、Conaway Ronald、Conaway Joan、髙橋秀尚
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] METTL1-mediated m7G modification regulates tRNA expression level to preserve complete fertility in Drosophila melanogaster2022
- Author(s)
  Shunya KANEKO、Keita MIYOSHI、Shu KONDO、Atsushi TOYODA、Makoto TERAUCHI、Hideki NOGUCHI、Kuniaki SAITO
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Drosophila METTL1 Induces m7G into tRNA to Preserve Complete Fertility2022
- Author(s)
  Shunya Kaneko、Keita Miyoshi、Shu Kondo、Atsushi Toyoda、Makoto Terauchi、Hideki Noguchi、Kuniaki Saito
- Organizer
  第23回日本RNA学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] m7G RNA modification by METTL1 stabilizes tRNAs and maintains fertility via controlling spermatogenesis in Drosophila melanogaster2022
- Author(s)
  Shunya KANEKO、Keita MIYOSHI、Shu KONDO、Atsushi TOYODA、Makoto TERAUCHI、Hideki NOGUCHI、Kuniaki SAITO
- Organizer
  Cold Spring Harbor Asia, RNA Biology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] トランスクリプトームデータ解析で探るサブプレートニューロンの発生起源2022
- Author(s)
  野口友理佳、阿知波ひとみ、隈元拓馬、丸山千秋
- Organizer
  第45回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ショウジョウバエRNAメチル化酵素METTL1はtRNAのm7G修飾を介して精子形成・稔性を制御する2022
- Author(s)
  金子隼也、三好啓太、近藤周、豊田敦、寺内真、野口英樹、齋藤都暁
- Organizer
  日本遺伝学会第94回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] キンギョ網膜のシングルセルRNA-seq解析による全ゲノム重複後の遺伝子進化の解明2022
- Author(s)
  Tetsuo Kon、Fukuta Kentaro、Masakazu Ishikawa、Hikari Tanaka、Hideki Noguchi、Atsushi Toyoda、Yoshihiro Omori
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] キンギョ網膜のシングルセル遺伝子発現解析による全ゲノム重複後のサブゲノム初期進化過程の理解2022
- Author(s)
  大森義裕、今鉄男、福多賢太郎、野口英樹、豊田敦
- Organizer
  NEURO2022 第45回日本神経科学大会第65回日本神経化学会大会第32回日本神経回路学会大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] メディエーター複合体による新規の3' PolⅡポージング制御機構の解明2021
- Author(s)
  鈴木秀文, 阿部竜太, 嶋田美穂, 廣瀬智威, 廣瀬博子, 野口慶介, 古郡華月, 池陽子, 安井七海, 山口雄輝, 豊田敦, 鈴木穣, 山本達郎, 斉藤典子, Ronald C. Conaway, Joan W. Conaway, 高橋秀尚
- Organizer
  第44回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] デメキン(Carrassius auratus)をモデルとした眼球サイズ制御機構の理解2021
- Author(s)
  大森義裕, 今鉄男, 福多賢太郎, 松浦佳吾, 豊田敦, 野口英樹
- Organizer
  第94回日本生化学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Goldfish (Carassius auratus) and closely related species, and evolution after whole genome duplication2021
- Author(s)
  大森義裕, 今鉄男, 福多賢太郎, 西野鞠, 野田夏希, 豊田敦, 野口英樹
- Organizer
  第44回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 新規ビオチン標識法を用いたマルチオミックス解析によるCajal body形成メカニズムの解明2021
- Author(s)
  野口慶介, 鈴木秀文, 阿部竜太, 池陽子, 井野洋子, 木村弥生, 梁明秀, 土井宏, 田中章景, 山口雄輝, 高橋秀尚
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 非コードRNAを含有する熱ストレス応答性の新規核内構造体, HiNoCo-bodyの同定2021
- Author(s)
  小野口玲菜、秋光信佳
- Organizer
  日本薬学会第141年会(広島)
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 自動的な真核生物用ゲノムアノテーションパイプラインの開発2021
- Author(s)
  福多賢太郎, 寺内真, 宮澤秀幸, 野口英樹
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ロングリードシークエンス技術を駆使した早期および進行肺がんの比較全ゲノム解析2021
- Author(s)
  鈴木絢子, 坂本祥駿, 野口雅之, 河野隆志, 鈴木穣
- Organizer
  第62回日本肺癌学会学術総会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Toward molecular bases of photoheterotrophy in the colonial volvocine species Astrephomene gubernaculifera and Volvulina steinii2019
- Author(s)
  Suguchi, A., Yamashita, S., Matsuzaki, R., Suzuki, S., Yamaguchi, H., Kawachi, M., Noguchi, H., Minakuchi, Y., Toyoda, A. and Nozaki, H.
- Organizer
  The Fifth International Volvox Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Unveiling the molecular bases involved in another evolution of multicellular complexity in Astrephomene gubernaculifera2019
- Author(s)
  Yamashita, S., Suguchi, A., Yamamoto, Y., Matsuzaki, R., Kawachi, M., Noguchi, H., Minakuchi, Y., Toyoda, A., Hirono, M., Sekimoto, H. and Nozaki, H.
- Organizer
  The Fifth International Volvox Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ボルボックス系列緑藻における多細胞形質の平行進化の分子基盤の解明に向けて2019
- Author(s)
  山下翔大、数口敦紀、山本荷葉子、松﨑令、野口英樹、水口洋平、豊田敦、河地正伸、廣野雅文、関本弘之、野崎久義
- Organizer
  日本植物学会第83回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] アストレフォメネの多細胞形質進化の解明に向けた新規ゲノムと形質転換の確立2019
- Author(s)
  山下翔大、数口敦紀、山本荷葉子、松﨑令、野口英樹、水口洋平、豊田敦、河地正伸、廣野雅文、関本弘之、野崎久義
- Organizer
  日本植物形態学会第31回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] エタノール発酵能の違いは種の違い? 南極産担子菌酵母Mrakia blollopisの全ゲノム解析による種の再検討2019
- Author(s)
  辻雅晴, 石原潤一, 高橋弘喜, 野口英樹
- Organizer
  第71回日本生物工学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] The evolution of mating type locus-like regions in the homothallic species Volvox africanus2019
- Author(s)
  Yamamoto, K., Hamaji, T., Kawai-Toyooka, H., Noguchi, H., Minakuchi, Y., Toyoda, A., and Nozaki, H.
- Organizer
  The International symposium organized by “Platform for Advanced Genome Science” -FRONTIERS OF GENOME SCIENCE-
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Revealing mating type locus evolution based on comparative genomics of heterothallic and homothallic Volvox species2019
- Author(s)
  Yamamoto, K., Hamaji, T., Kawai-Toyooka, H., Noguchi, H., Minakuchi, Y., Toyoda, A. and Nozaki, H.
- Organizer
  The Fifth International Volvox Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 卵生殖ボルボックス性染色体領域の拡大2019
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本植物学会第83回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ボルボックスにおける性染色体領域の進化2019
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本植物形態学会第31回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Volvox属Merrillosphaera節における性染色体領域の拡大2019
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本藻類学会第43回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 真核生物ゲノムにおける高汎用ab initio遺伝子予測アルゴリズムの開発2018
- Author(s)
  寺内真、野口英樹
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] RNA-seq及び相同性検索を用いた真核生物用ゲノムアノテーションパイプライン2018
- Author(s)
  福多賢太郎、近藤伸二、野口英樹
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] k-mer頻度を用いて反復配列を検出する手法の開発2018
- Author(s)
  宮澤秀幸、福多賢太郎、野口英樹
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 雌雄異株種・同株種ボルボックスの性染色体領域・相同領域における比較ゲノム解析2018
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、新垣陽子、野口英樹、豊田敦、水口洋平、野崎久義
- Organizer
  日本植物学会第82回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ホモタリック種ボルボックスの進化を比較ゲノム解析から探る2018
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本植物形態学会第30回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Characterization of heat-responsible novel nuclear body containing MALAT12018
- Author(s)
  Rena Onoguchi-Mizutani
- Organizer
  第25回Tokyo RNA Club
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 第3 世代1 分子シークエンサーによる新規大型ゲノム解読2014
- Author(s)
  藤山秋佐夫、野口英樹、豊田敦
- Organizer
  日本人類遺伝学会
- Place of Presentation
  東京都江戸川区（タワーホール船堀）
- Year and Date
  2014-11-21
- Invited
- Data Source
  KAKENHI-PROJECT-25250024
[Presentation] 有殻アメーバ Paulinella chromatophora のゲノム解析
- Author(s)
  松尾充啓, 潟端篤, 水口洋平, 野口英樹, 豊田敦, 藤山秋佐夫, 鈴木穣, 佐藤壮一郎, 松崎素道, 中山卓郎, 神川龍馬, 野村真未, 壁谷如洋, 宮城島進也, 稲垣祐司, 石田健一郎, 小保方潤一
- Organizer
  第37回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2014-11-25 – 2014-11-27
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 大規模全ゲノムシーケンシングによるニホンザルの種特異的ゲノム情報の探索
- Author(s)
  福多賢太郎，野口英樹，豊田敦，長田直樹，郷康弘，石田貴文，伊佐正，藤山秋佐夫
- Organizer
  日本霊長類学会
- Place of Presentation
  大阪市西区（大阪科学技術センター）
- Year and Date
  2014-07-04 – 2014-07-06
- Data Source
  KAKENHI-PROJECT-25250024

1. ITOH TAKEHIKO (90501106)

# of Collaborated Projects: 5 results

# of Collaborated Products: 9 results
2. TOYODA Atsushi (10267495)

# of Collaborated Projects: 5 results

# of Collaborated Products: 32 results
3. YADA Tetsushi (10322728)

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Noguchi Hideki 野口 英樹

野口 英樹

NOGUCHI Hideki 野口 英樹

野口 秀樹 ノグチ ヒデキ

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Gene prediction and classification on the microbial metagenomes including fungal speciesPrincipal Investigator

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比較ゲノム解析および遺伝子発現プロファイルに基づいたプロモータ情報構造の解析Principal Investigator

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[Journal Article] Genome assembly of Genji firefly Nipponoluciola cruciata reveals novel luciferase-like luminescent proteins without peroxisome targeting signal2024

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[Journal Article] Identification of small-sized intrachromosomal segments at the ends of INV-DUP-DEL patterns2023

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[Journal Article] Whole-genome sequencing reveals the molecular implications of the stepwise progression of lung adenocarcinoma2023

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Noguchi Hideki 野口英樹

野口英樹

NOGUCHI Hideki 野口英樹

野口秀樹ノグチヒデキ