Kajitani Rei 梶谷嶺

Researcher Number	40756706
Other IDs
Affiliation (based on the past Project Information) *help	2016 – 2023: 東京工業大学, 生命理工学院, 助教 2015: 東京工業大学, 生命理工学研究科, 助教
Review Section/Research Field	Principal Investigator Sections That Are Subject to Joint Review: Basic Section45010:Genetics-related ,Basic Section45020:Evolutionary biology-related / Basic Section 45020:Evolutionary biology-related / Basic Section 45010:Genetics-related / Basic Section 43050:Genome biology-related / Basic Section 43010:Molecular biology-related / Genome biology Except Principal Investigator Basic Section 17050:Biogeosciences-related / Basic Section 49050:Bacteriology-related / Bacteriology (including mycology) / Genome biology
Keywords	Principal Investigator ゲノム / ハプロタイプ / de novoアセンブリ / 高ヘテロ接合性 / ゲノム多様性 / 多様性 / NGS / ヘテロ接合性 / メタゲノム / ヘテロ接合度 … More / バイオインフォマティクス / ハプロタイプ配列 / アレル特異的現象 / アレル特異的 / 遺伝子構造アノテーション / アルゴリズム / de novo アセンブリ / 多倍体 … More Except Principal Investigator ゲノム / 進化 / メタゲノム / 病原性 / 腸管出血性大腸菌 / ３型分泌装置 / 志賀毒素 / 海洋堆積物 / 微生物群集構造 / 16S RNA / 微生物生態 / 極限環境 / DNA / 16S rRNA / 適応 / 微生物 / 海底下堆積物 / 適応・進化 / 微生物群集 / 堆積物 / 海底下生命圏 / ゲノムアノテーション / ゲノム多型 / ゲノムアッセンブル / スーパーコンピューター / メタゲノム解析 / 1細胞解析 / RNA-Seq / エピゲノム / リシーケンシング / 新規ゲノム配列決定 / 次世代DNAシーケンサー / 原生生物 / ファージ / 腸管病原性大腸菌 / 志賀毒素産生性大腸菌 / アセンブラ / ゲノム解析 / ハプロタイプ / ゲノム構築 / 次世代シークエンサー / ゲノムアセンブル / ヘテロ接合性 / ゲノムアセンブラ Less

プログラム済みゲノム再構成　複数系統調査から探るその進化的意義Principal Investigator
- Principal Investigator
  
  梶谷嶺
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 45010:Genetics-related
  Basic Section 45020:Evolutionary biology-related
  Sections That Are Subject to Joint Review: Basic Section45010:Genetics-related ,Basic Section45020:Evolutionary biology-related
- Research Institution
  Tokyo Institute of Technology
Microbial evolution below the seafloor
- Principal Investigator
  
  星野辰彦
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 17050:Biogeosciences-related
- Research Institution
  Japan Agency for Marine-Earth Science and Technology
多個体ハプロタイプ解析による超高ヘテロ接合性生物圏の実態解明Principal Investigator
- Principal Investigator
  
  梶谷嶺
- Project Period (FY)
  2020 – 2023
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  Tokyo Institute of Technology
Analysis of emerging process of enterohemorrhagic escherichia coli
- Principal Investigator
  
  Yoshitoshi Ogura
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 49050:Bacteriology-related
- Research Institution
  Kurume University
Development of an analysis pipeline for allele-specific genome dynamics based on haplotype sequencesPrincipal Investigator
- Principal Investigator
  
  Kajitani Rei
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43010:Molecular biology-related
- Research Institution
  Tokyo Institute of Technology
Emerging process of Enterohemorrhagic Escherichia coli revealed by a large-scale genome analysis
- Principal Investigator
  
  Yoshitoshi Ogura
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Bacteriology (including mycology)
- Research Institution
  Kyushu University
Development of haplotype phased genome assembler
- Principal Investigator
  
  Itoh Takehiko
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Genome biology
- Research Institution
  Tokyo Institute of Technology
Platform for Advanced Genome Science
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2016 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources
- Research Institution
  National Institute of Genetics
Development of an assembly method for whole genomes of polyploid organismsPrincipal Investigator
- Principal Investigator
  
  Kajitani Rei
- Project Period (FY)
  2015 – 2016
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Genome biology
- Research Institution
  Tokyo Institute of Technology

All 2023 2022 2021 2020 2019 2018 2017 2016

All Journal Article Presentation

[Journal Article] Integrated Population Genomic Analysis and Numerical Simulation to Estimate Larval Dispersal of Acanthaster cf. solaris Between Ogasawara and Other Japanese Regions2022
- Author(s)
  Horoiwa Mizuki、Nakamura Takashi、Yuasa Hideaki、Kajitani Rei、Ameda Yosuke、Sasaki Tetsuro、Taninaka Hiroki、Kikuchi Taisei、Yamakita Takehisa、Toyoda Atsushi、Itoh Takehiko、Yasuda Nina
- Journal Title
  
  Frontiers in Marine Science
  
  Volume: 8 Pages: 688139-688139
- DOI
  10.3389/fmars.2021.688139
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19J21342, KAKENHI-PROJECT-16H06279
[Journal Article] Genomic Signatures for Species-Specific Adaptation in Lake Victoria Cichlids Derived from Large-Scale Standing Genetic Variation2021
- Author(s)
  Nakamura Haruna、Aibara Mitsuto、Kajitani Rei、Mrosso Hillary D J、Mzighani Semvua I、Toyoda Atsushi、Itoh Takehiko、Okada Norihiro、Nikaido Masato
- Journal Title
  
  Molecular Biology and Evolution
  
  Volume: in press Issue: 8 Pages: 3111-3125
- DOI
  10.1093/molbev/msab084
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20KK0167, KAKENHI-PROJECT-20J13861, KAKENHI-PROJECT-16H06279
[Journal Article] Elucidation of the speciation history of three sister species of crown-of-thorns starfish (Acanthaster spp.) based on genomic analysis2021
- Author(s)
  Hideaki Yuasa, Rei Kajitani, Yuta Nakamura, Kazuki Takahashi, Miki Okuno, Fumiya Kobayashi, Takahiro Shinoda, Atsushi Toyoda, Yutaka Suzuki, Nalinee Thongtham, Zac Forsman, Omri Bronstein, Davide Seveso, Enrico Montalbetti, Coralie Taquet, Gal Eyal, Nina Yasuda, Takehiko Itoh
- Journal Title
  
  DNA Research
  
  Volume: 28 Issue: 4
- DOI
  10.1093/dnares/dsab012
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H03206, KAKENHI-PROJECT-16H06279
[Journal Article] MetaPlatanus: a metagenome assembler that combines long-range sequence links and species-specific features2021
- Author(s)
  Rei Kajitani, Hideki Noguchi, Yasuhiro Gotoh, Yoshitoshi Ogura, Dai Yoshimura, Miki Okuno, Atsushi Toyoda, Tomomi Kuwahara, Tetsuya Hayashi, Takehiko Itoh
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 49 Issue: 22 Pages: e130-e130
- DOI
  10.1093/nar/gkab831
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H03206, KAKENHI-PROJECT-20H04125, KAKENHI-PROJECT-21K19211, KAKENHI-PROJECT-20K15769, KAKENHI-PROJECT-16H06279
[Journal Article] Insights into the genomic evolution of insects from cricket genomes2021
- Author(s)
  Guillem Ylla, Taro Nakamura, Takehiko Itoh, Rei Kajitani, Atsushi Toyoda, Sayuri Tomonari, Tetsuya Bando, Yoshiyasu Ishimaru, Takahito Watanabe, Masao Fuketa, Yuji Matsuoka, Austen A. Barnett, Sumihare Noji, Taro Mito & Cassandra G. Extavour
- Journal Title
  
  Communications Biology
  
  Volume: 4 Issue: 1 Pages: 733-733
- DOI
  10.1038/s42003-021-02197-9
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06184, KAKENHI-PROJECT-19K06691, KAKENHI-PROJECT-21K06121, KAKENHI-PROJECT-16H06279
[Journal Article] Comparative genomics of Glandirana rugosa using unsupervised AI reveals a high CG frequency2021
- Author(s)
  Katsura Y, Ikemura T, Kajitani R, Toyoda A, Itoh T, Ogata M, Miura I, Wada K, Wada Y, and Satta Y
- Journal Title
  
  Life Science Alliance
  
  Volume: - Issue: 5 Pages: e202000905-e202000905
- DOI
  10.26508/lsa.202000905
- NAID
  120007153083
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06788, KAKENHI-PROJECT-18K14766, KAKENHI-PROJECT-16H06279
[Journal Article] A ubiquitous subcuticular bacterial symbiont of a coral predator, the crown-of-thorns starfish, in the Indo-Pacific2020
- Author(s)
  Wada Naohisa、Yuasa Hideaki、Kajitani Rei、Gotoh Yasuhiro、Ogura Yoshitoshi、Yoshimura Dai、Toyoda Atsushi、Tang Sen-Lin、Higashimura Yukihiro、Sweatman Hugh、Forsman Zac、Bronstein Omri、Eyal Gal、Thongtham Nalinee、Itoh Takehiko、Hayashi Tetsuya、Yasuda Nina
- Journal Title
  
  Microbiome
  
  Volume: 8 Issue: 1 Pages: 123-123
- DOI
  10.1186/s40168-020-00880-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17H04996, KAKENHI-PROJECT-18J23317, KAKENHI-PROJECT-16H06279
[Journal Article] Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions.2019
- Author(s)
  Kajitani R, Yoshimura D, Okuno M, Minakuchi Y, Kagoshima H, Fujiyama A, Kubokawa K, Kohara Y, Toyoda A, Itoh T
- Journal Title
  
  Nat Commun
  
  Volume: - Issue: 1 Pages: 1702-1702
- DOI
  10.1038/s41467-019-09575-2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-INTERNATIONAL-15K21761, KAKENHI-ORGANIZER-15H05970, KAKENHI-PLANNED-15H05979, KAKENHI-PROJECT-16H04719, KAKENHI-PROJECT-17K01019, KAKENHI-PROJECT-16H06279
[Journal Article] Evaluation of SNP calling methods for closely related bacterial isolates and a novel high-accuracy pipeline: BactSNP2019
- Author(s)
  Yoshimura Dai、Kajitani Rei、Gotoh Yasuhiro、Katahira Katsuyuki、Okuno Miki、Ogura Yoshitoshi、Hayashi Tetsuya、Itoh Takehiko
- Journal Title
  
  Microbial Genomics
  
  Volume: 5 Issue: 5
- DOI
  10.1099/mgen.0.000261
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-ORGANIZER-15H05970, KAKENHI-PLANNED-15H05979, KAKENHI-PROJECT-16H06279
[Journal Article] Repeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetles2018
- Author(s)
  Ando Toshiya、Matsuda Takeshi、Goto Kumiko、Hara Kimiko、Ito Akinori、Hirata Junya、Yatomi Joichiro、Kajitani Rei、Okuno Miki、Yamaguchi Katsushi、Kobayashi Masaaki、Takano Tomoyuki、Minakuchi Yohei、Seki Masahide、Suzuki Yutaka、Yano Kentaro、Itoh Takehiko、Shigenobu Shuji、Toyoda Atsushi、Niimi Teruyuki
- Journal Title
  
  Nature Communications
  
  Volume: 9 Issue: 1 Pages: 3843-3843
- DOI
  10.1038/s41467-018-06116-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-17H05848, KAKENHI-PROJECT-16H06279
[Journal Article] Next-generation sequencing analysis of lager brewing yeast strains reveals the evolutionary history of interspecies hybridization2016
- Author(s)
  Miki Okuno, Rei Kajitani, Rie Ryusui, Hiroya Morimoto, Yukiko Kodama and Takehiko Itoh
- Journal Title
  
  DNA Research
  
  Volume: 23 Pages: 67-80
- DOI
  10.1093/dnares/dsv037
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H06209
[Presentation] Mechanism of community assembly in the subseafloor biosphere2023
- Author(s)
  Tatsuhiko Hoshino, Rei Kajitani
- Organizer
  Japan Geoscience Union Meeting 2023
- Invited
- Data Source
  KAKENHI-PROJECT-23K22618
[Presentation] GreenHill: A De Novo Chromosome-Level Scaffolding and Phasing Tool Using Hi-C2023
- Author(s)
  Shun Ouchi, Rei Kajitani, Takehiko Itoh
- Organizer
  Plant and Animal Genome Conference / PAG 30
- Data Source
  KAKENHI-PROJECT-20K15769
[Presentation] 免疫システムがもたらしたシクリッドの唇肥大化平行進化2022
- Author(s)
  畑島諒, 待井長敏, 豊田敦, 梶谷嶺, 長澤竜樹, 伊藤武彦, 二階堂雅人
- Organizer
  第2回日本遺伝学会春の分科会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] RNA polymerase Ⅱによる転写とヒストン修飾の安定性制御2021
- Author(s)
  梶谷卓也
- Organizer
  第14回日本エピジェネティクス研究会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Hi-Cデータを用いたビニングツールの開発2021
- Author(s)
  服部拓海、梶谷嶺、伊藤武彦
- Organizer
  第11回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-20K15769
[Presentation] 転写装置RNA polymerase II CTD-Ser7リン酸化は転写一時停止とヘテロクロマチン形成を促進する。2021
- Author(s)
  梶谷卓也
- Organizer
  第39回染色体ワークショップ・第20回核ダイナミクス研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 東アフリカ産シクリッドで見られる唇肥大化平行進化の分子メカニズム2021
- Author(s)
  畑島諒, 豊田敦, 梶谷嶺, 伊藤武彦, 二階堂雅人
- Organizer
  第23回日本進化学会年大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 細胞周期が遺伝子発現不均質性を生み出す可能性の検証2021
- Author(s)
  梶谷卓也
- Organizer
  日本生化学会北陸支部例会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] A key factor for parallel evolution of hypertrophied lips in East African cichlid fishes2021
- Author(s)
  Hatashima, R., Toyoda, A., Kajitani, R. Itoh, T. and Nikaido, M.
- Organizer
  The 2nd AsiaEvo Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 細胞周期が遺伝子発現不均質性を生み出す可能性の検証2021
- Author(s)
  梶谷卓也
- Organizer
  日本生化学会北陸支部第39回大会例会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 遺伝子発現と細胞周期の相関関係について2021
- Author(s)
  梶谷卓也
- Organizer
  日本遺伝学会第93回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 細胞周期とクロマチン構造の関係性の検証2021
- Author(s)
  梶谷卓也
- Organizer
  酵母遺伝学フォーラム第54回研究報告会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 東アフリカ産シクリッドで見られる唇肥大化平行進化の分子メカニズム2021
- Author(s)
  畑島諒, 豊田敦, 梶谷嶺, 伊藤武彦, 二階堂雅人
- Organizer
  The 2nd AsiaEvo Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] RNA polymerase IIリン酸化による転写一時停止はエピジェネティクス情報不均一さを抑制する2020
- Author(s)
  梶谷卓也
- Organizer
  日本生化学会北陸支部例会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Update of Platanus-allee, a de novo haplotype assembler, and its application to the organisms with highly divergent haplotypes2020
- Author(s)
  Rei Kajitani, Miki Okuno, Hiroyuki Tanaka, Atsushi Toyoda, Takehiko Itoh
- Organizer
  Plant & animal genome conference XXVIII
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] シクリッドにおける唇肥大化の平行進化メカニズム2020
- Author(s)
  畑島諒、豊田敦、梶谷嶺、伊藤武彦、二階堂雅人
- Organizer
  日本動物学会第91回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ロングリードを活用したゲノムアセンブリ用新規スキャフォールディングツールの開発2020
- Author(s)
  石井裕太、梶谷嶺、伊藤武彦
- Organizer
  第９回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-20K15769
[Presentation] Whole-genome sequencing and comparative analysis of emu provides insights into sex chromosome evolution of the Palaeognathae clade2020
- Author(s)
  Miki Okuno, Rei Kajitani, Hiroyuki Tanaka, Shuhei Mizushima, Asato Kuroiwa, Takehiko Itoh
- Organizer
  Plant & animal genome conference XXVIII
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Hi-C法による染色体レベルのscaffolding、ハプロタイプ構築手法の開発と高ヘテロ接合性サンプル (イトマキヒトデ) への応用2020
- Author(s)
  大内俊、梶谷嶺、伊藤武彦
- Organizer
  日本動物学会第91回大会
- Data Source
  KAKENHI-PROJECT-18K14624
[Presentation] ドラフトゲノムの不完全性が遺伝子構造アノテーションに及ぼす影響の解析2019
- Author(s)
  小林史弥、梶谷嶺、中村優太、奥野未来、湯淺英知、伊藤武彦
- Organizer
  第８回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-18K14624
[Presentation] ドラフトゲノムに対応した遺伝子構造アノテーション自動構築パイプラインの開発2019
- Author(s)
  中村優太、梶谷嶺、小林史弥、湯淺英知、伊藤武彦
- Organizer
  第８回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-18K14624
[Presentation] エミューゲノムの構築と比較解析による古顎類の性染色体進化の解明2019
- Author(s)
  奥野未来, 梶谷嶺, 田中裕之, 水島秀成, 黒岩麻里, 伊藤武彦
- Organizer
  第90回日本動物学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] イトマキヒトデのモデル生物化に向けて～イトマキヒトデのゲノム構築～2019
- Author(s)
  伊藤武彦, 梶谷嶺, 奥野未来, 田中裕之, 豊田敦, 立花和則, 岸本健雄
- Organizer
  第90回日本動物学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 網羅的遺伝子構造予測自動アノテーションパイプラインの開発2018
- Author(s)
  篠田恭寛、梶谷嶺、小林史弥、髙橋和希、中村優太、湯淺英知、伊藤武彦
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-18K14624
[Presentation] Y染色体をもたないアマミトゲネズミの遺伝子配列を用いた進化学的解析2018
- Author(s)
  岡野真佑, 奥野未来, 梶谷嶺, 黒岩麻里, 伊藤武彦
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 網羅的遺伝子構造予測自動アノテーションパイプラインの開発2018
- Author(s)
  篠田恭寛, 梶谷嶺, 小林史弥, 高橋和希, 中村優太, 湯淺英知, 伊藤武彦
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] インドー太平洋のオニヒトデから見つかった未知の菌のゲノム解析2018
- Author(s)
  湯淺英知, 梶谷嶺, 後藤恭宏, 和田直久, 吉村大, 小椋義俊, 林哲也, 安田仁奈, 伊藤武彦
- Organizer
  第21回日本サンゴ礁学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 10X-Linked-reads、Mate-pairを活用したメタゲノムアセンブリ手法の開発2018
- Author(s)
  梶谷嶺, 小椋義俊, 後藤恭宏, 林哲也, 伊藤武彦
- Organizer
  第12回ゲノム微生物学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] オニヒトデから見つかった謎の共在菌について2018
- Author(s)
  和田直久, 湯淺英知, 梶谷嶺, 後藤恭弘, 小椋義俊, 吉村大, 豊田敦, Sen-Lin TANG, 東村幸浩, Hugh SWEATMAN, Zac FORSMAN, Omri BRONSTEIN, Gal EYAL, Nalinee THONGTHAM, 林哲也, 伊藤武彦, 安田仁奈
- Organizer
  第21回日本サンゴ礁学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] イトマキヒトデの卵成熟前後におけるmRNA3'末端の網羅的解析2017
- Author(s)
  野川駿, 岩永紗弥, 梶谷嶺, 越智洋絵, 鈴木穣, 千葉和義, 伊藤武彦
- Organizer
  日本動物学会第88回富山大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] メタゲノムショットガンデータからの株ハプロタイプ配列構築手法の開発2017
- Author(s)
  梶谷嶺，小椋義俊，後藤恭宏，吉村大，奥野未来，林哲也，伊藤武彦
- Organizer
  第11回日本ゲノム微生物学会年会
- Place of Presentation
  慶応義塾大学　湘南藤沢キャンパス
- Year and Date
  2017-03-02
- Data Source
  KAKENHI-PROJECT-16H04719
[Presentation] メタゲノムショットガンデータからの株ハプロタイプ配列構築手法の開発2017
- Author(s)
  梶谷嶺、小椋義俊、後藤恭宏、吉村大、奥野未来、林哲也、伊藤武彦
- Organizer
  第11回日本ゲノム微生物学会年会
- Place of Presentation
  慶應義塾大学　湘南藤沢キャンパス
- Year and Date
  2017-03-02
- Data Source
  KAKENHI-PROJECT-15H06209
[Presentation] ショートリードを用いたりピート配列のde novo検出法の開発2017
- Author(s)
  田中良樹, 梶谷嶺, 豊田敦, 後藤友二, 久保田宗一郎, 伊藤武彦
- Organizer
  日本動物学会第88回富山大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Examining genetic divergence of closely related Crown-of-Thorns starfish species between Indian and Pacific Ocean using whole genome data.2017
- Author(s)
  Hideaki Yuasa, Rei Kajitani, Kazuki Takahashi, Dai Yoshimura, Takehiko Itoh, Yoshitoshi Ogura, Tetuya Hayashi, Zac Forsman, Nalinee Thongtham, Niphon Phongsuwan, Coralie Taquet, Marc Taquet, Nina Yasuda
- Organizer
  The Third Asia Marine Biology Symposium
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] PacBioおよびIlluminaシークエンサを用いた新規アセンブル手法の開発2017
- Author(s)
  番匠康雄，梶谷嶺，伊藤武彦
- Organizer
  第11回日本ゲノム微生物学会年会
- Place of Presentation
  慶応義塾大学　湘南藤沢キャンパス
- Year and Date
  2017-03-02
- Data Source
  KAKENHI-PROJECT-16H04719
[Presentation] Platanus2: a de novo haplotype assembler enabling comprehensive accesses to divergent heterozygous region.2017
- Author(s)
  梶谷嶺，吉村大，奥野未来，豊田敦，伊藤武彦
- Organizer
  第6回生命医薬情報学連合大会（IIBMP2017）
- Data Source
  KAKENHI-PROJECT-16H04719
[Presentation] Molecular mechanism and evolution of female-limited and polymorphic Batesain mimicry in Papilio polytes.2017
- Author(s)
  Fujiwara, H., Nishikawa, H., Iijima, T., Kajitani, R. and Ito, T.
- Organizer
  19th Annual Meeting of the Society of Evolutionary Studiies
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279

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Kajitani Rei 梶谷 嶺

Research Projects

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Co-Researchers

プログラム済みゲノム再構成 複数系統調査から探るその進化的意義Principal Investigator

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Microbial evolution below the seafloor

Principal Investigator

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多個体ハプロタイプ解析による超高ヘテロ接合性生物圏の実態解明Principal Investigator

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Analysis of emerging process of enterohemorrhagic escherichia coli

Principal Investigator

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Development of an analysis pipeline for allele-specific genome dynamics based on haplotype sequencesPrincipal Investigator

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Emerging process of Enterohemorrhagic Escherichia coli revealed by a large-scale genome analysis

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Development of haplotype phased genome assembler

Principal Investigator

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Platform for Advanced Genome Science

Principal Investigator

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Development of an assembly method for whole genomes of polyploid organismsPrincipal Investigator

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[Journal Article] Integrated Population Genomic Analysis and Numerical Simulation to Estimate Larval Dispersal of Acanthaster cf. solaris Between Ogasawara and Other Japanese Regions2022

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[Journal Article] Genomic Signatures for Species-Specific Adaptation in Lake Victoria Cichlids Derived from Large-Scale Standing Genetic Variation2021

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[Journal Article] Elucidation of the speciation history of three sister species of crown-of-thorns starfish (Acanthaster spp.) based on genomic analysis2021

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[Journal Article] MetaPlatanus: a metagenome assembler that combines long-range sequence links and species-specific features2021

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[Journal Article] Insights into the genomic evolution of insects from cricket genomes2021

Author(s)

Journal Title

Kajitani Rei 梶谷嶺

プログラム済みゲノム再構成　複数系統調査から探るその進化的意義Principal Investigator