Tanizawa Yasuhiro 谷澤靖洋

Researcher Number	90836511
Other IDs
Affiliation (Current)	2025: 国立遺伝学研究所, 情報研究系, 助教
Affiliation (based on the past Project Information) *help	2020 – 2024: 国立遺伝学研究所, 情報研究系, 助教
Review Section/Research Field	Principal Investigator Basic Section 43060:System genome science-related Except Principal Investigator Basic Section 64040:Social-ecological systems-related
Keywords	Principal Investigator データベース / ゲノム / ゼニゴケ Except Principal Investigator 微生物資源 / 遺伝子配列予測 / 極地 / 全ゲノム解析 / 多様性 / 菌類 / 北極 … More / 南極 / ゲノムアノテーション / メタゲノム / ゲノム多型 / ゲノムアッセンブル / スーパーコンピューター / メタゲノム解析 / 1細胞解析 / RNA-Seq / エピゲノム / リシーケンシング / 新規ゲノム配列決定 / 次世代DNAシーケンサー Less

Elucidating the changes in fungal diversity in the Antarctic and Arctic regions and establishing polar-derived fungi as a genetic resource
- Principal Investigator
  
  辻雅晴
- Project Period (FY)
  2023 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 64040:Social-ecological systems-related
- Research Institution
  Asahikawa National College of Technology
ゼニゴケゲノムDBの拡張開発と仮想化技術を応用した高可搬性ゲノムDBの開発Principal Investigator
- Principal Investigator
  
  谷澤靖洋
- Project Period (FY)
  2020 – 2024
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43060:System genome science-related
- Research Institution
  National Institute of Genetics
Platform for Advanced Genome Science
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2016 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources
- Research Institution
  National Institute of Genetics

All 2023 2022 2021 2020 2019 2018 2017 2016

All Journal Article Presentation Book

[Book] Gene Prediction Methods and Protocols2019
- Author(s)
  Tanizawa Y, Fujisawa T, Arita M, Nakamura Y.
- Pages
  215-226
- Total Pages
  283
- Publisher
  Humana, New York, NY
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] Methods in Molecular Biology, Gene Prediction2019
- Author(s)
  Yasuhiro Tanizawa, Takatomo Fujisawa, Masanori Arita, Yasukazu Nakamura
- Pages
  215-226
- Total Pages
  284
- Publisher
  Springer Nature.
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] 次世代シークエンサーDRY解析教本改訂第2版2019
- Author(s)
  谷澤靖洋、中村保一
- Pages
  246-273
- Total Pages
  384
- Publisher
  学研プラス
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] 特集/コケ植物:遺伝子資源と機能応用「ゲノム情報とデータベースの利用」2023
- Author(s)
  谷澤靖洋
- Journal Title
  
  アグリバイオ
  
  Volume: 7(3) Pages: 8-11
- Data Source
  KAKENHI-PROJECT-20K15783
[Journal Article] MarpolBase Expression: A Web-Based, Comprehensive Platform for Visualization and Analysis of Transcriptomes in the Liverwort Marchantia polymorpha2022
- Author(s)
 Kawamura Shogo、Romani Facundo、Yagura Masaru、Mochizuki Takako、Sakamoto Mika、Yamaoka Shohei、Nishihama Ryuichi、Nakamura Yasukazu、Yamato Katsuyuki T、Bowman John L、Kohchi Takayuki、Tanizawa Yasuhiro
- Journal Title
 
 Plant and Cell Physiology
 
 Volume: 63 Issue: 11 Pages: 1745-1755
- DOI
 10.1093/pcp/pcac129
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
 KAKENHI-PROJECT-22K19345, KAKENHI-PROJECT-20K15783, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00417, KAKENHI-PROJECT-20H03275, KAKENHI-PROJECT-21J15550, KAKENHI-PROJECT-17H07424, KAKENHI-PUBLICLY-22H04733, KAKENHI-ORGANIZER-19H05670, KAKENHI-PLANNED-19H05675
[Journal Article] Genome evolution of a nonparasitic secondary heterotroph, the diatom Nitzschia putrida2022
- Author(s)
 Kamikawa R、Mochizuki T、Sakamoto M、Tanizawa Y、Nakayama T、Onuma R、Cenci U、Moog D、Speak S、Sarkozi K、Toseland A、van Oosterhout C、Oyama K、Kato M、Kume K、Kayama M、Azuma T、Ishii K、Miyashita H、Henrissat B、Lombard V、Win J、Kamoun S、Kashiyama Y、Mayama S、Miyagishima S、Tanifuji G、Mock T、Nakamura Y
- Journal Title
 
 Science Advances
 
 Volume: 8 Issue: 17
- DOI
 10.1126/sciadv.abi5075
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
 KAKENHI-PROJECT-20H03305, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20K15783, KAKENHI-PROJECT-19H03274, KAKENHI-PROJECT-23K21334, KAKENHI-PROJECT-20H00477
[Journal Article] Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system2021
- Author(s)
  Miyuki Iwasaki Katsuyuki T. Yamato John L. Bowman Takayuki Kohchi et al
- Journal Title
  
  Current Biology
  
  Volume: 31 Issue: 24 Pages: 5522-5532.e7
- DOI
  10.1016/j.cub.2021.10.023
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K16166, KAKENHI-PUBLICLY-20H04884, KAKENHI-ORGANIZER-20H05778, KAKENHI-PLANNED-20H05780, KAKENHI-PROJECT-21J15550, KAKENHI-PROJECT-21K06228, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17H07424, KAKENHI-PROJECT-22KJ1701, KAKENHI-ORGANIZER-19H05670, KAKENHI-PLANNED-19H05675
[Journal Article] Whole-exome sequencing of 79 xenografts as a potential approach for the identification of genetic variants associated with sensitivity to cytotoxic anticancer drugs2020
- Author(s)
  Udagawa Chihiro、Sasaki Yasushi、Tanizawa Yasuhiro、Suemizu Hiroshi、Ohnishi Yasuyuki、Nakamura Yasukazu、Tokino Takashi、Zembutsu Hitoshi
- Journal Title
  
  PLOS ONE
  
  Volume: 15 Issue: 9 Pages: e0239614-e0239614
- DOI
  10.1371/journal.pone.0239614
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K07645, KAKENHI-PROJECT-20K08390, KAKENHI-PROJECT-17K09354, KAKENHI-PROJECT-16H06279
[Journal Article] Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin2020
- Author(s)
  Montgomery SA, Tanizawa Y, Galik B, Wang N, Ito T, Mochizuki T, Akimcheva S, Bowman JL, Cognat V, Drouard L, Ekker H, Houng SF, Kohchi T, Lin SS, Liu LYD, Nakamura Y, Valeeva LR, Shakirov EV, Shippen DE, Wei WL, Yagura M, Yamaoka S, Yamato KT, Liu C, Berger F.
- Journal Title
  
  Current Biology
  
  Volume: 30 Issue: 4 Pages: 573-588
- DOI
  10.1016/j.cub.2019.12.015
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06285, KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-19H04860, KAKENHI-PLANNED-19H05675, KAKENHI-PROJECT-17H07424
[Journal Article] Large-scale genome analysis of bovine commensal Escherichia coli reveals that bovine-adapted E. coli lineages are serving as evolutionary sources of the emergence of human intestinal pathogenic strains.2019
- Author(s)
  Arimizu Y, Kirino Y, Sato MP, Uno K, Sato T, Gotoh Y, Auvray F, Brugere H, Oswald E, Mainil JG, Anklam KS, Dopfer D, Yoshino S, Ooka T, Tanizawa Y, Nakamura Y, Iguchi A, Morita-Ishihara T, Ohnishi M, Akashi K, Hayashi T, Ogura Y
- Journal Title
  
  Genome Research
  
  Volume: 29 Issue: 9 Pages: 1495-1505
- DOI
  10.1101/gr.249268.119
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K09183, KAKENHI-PROJECT-17H04077, KAKENHI-PROJECT-16H06279
[Journal Article] DFAST : a flexible prokaryotic genome annotation pipeline for faster genome publication2018
- Author(s)
  Y Tanizawa, T Fujisawa, Y Nakamura
- Journal Title
  
  Bioinformatics
  
  Volume: 34 Issue: 6 Pages: 1037-1039
- DOI
  10.1093/bioinformatics/btx713
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri2017
- Author(s)
  Yasuhiro TANIZAWA, Hisami KOBAYASHI, Eli KAMINUMA, Mitsuo SAKAMOTO, Moriya OHKUMA, Yasukazu NAKAMURA, Masanori ARITA, Masanori TOHNO
- Journal Title
  
  Biosci Microbiota Food Health.
  
  Volume: 36 Issue: 3 Pages: 129-134
- DOI
  10.12938/bmfh.16-026
- NAID
  130005759236
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] DFAST and DAGA: web-based integrated genome annotation tools and resources2016
- Author(s)
  Tanizawa Y, Fujisawa T, Kamimuma E, Nakamura Y, Arita M.
- Journal Title
  
  Bioscience of Microbiota, Food and Health
  
  Volume: 35 Issue: 4 Pages: 173-184
- DOI
  10.12938/bmfh.16-003
- NAID
  130005250038
- ISSN
  2186-3342
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Methods for analyzing next-generation sequencing dataVI. genome assembly 2016
- Author(s)
 谷澤靖洋、神沼英里、中村保一、清水謙多郎、門田幸二
- Journal Title
 
 Japanese Journal of Lactic Acid Bacteria
 
 Volume: 27 Issue: 1 Pages: 41-52
- DOI
 10.4109/jslab.27.41
- NAID
 130005628247
- ISSN
 1343-327X, 2186-5833
- Language
 Japanese
- Open Access
- Data Source
 KAKENHI-PROJECT-16H06279
[Presentation] High quality reference genome sequences of liverwort: Toward completion of the Marchantia Genome Project2023
- Author(s)
  Yasuhiro Tanizawa, Shogo Kawamura, Takako Mochizuki, Mika Sakamoto, Shohei Yamaoka, Ryuichi Nishihama, Facundo Romani, John L. Bowman, Frederic Berger, Takayuki Kohchi, Yasukazu Nakamura
- Organizer
  2023 Mini-symposium of Marchantia polymorpha
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K15783
[Presentation] High quality reference genome sequences of liverwort: Toward completion of the Marchantia Genome Project2023
- Author(s)
  Yasuhiro Tanizawa, Shogo Kawamura, Takako Mochizuki, Mika Sakamoto, Shohei Yamaoka, Ryuichi Nishihama, Facundo Romani, John L. Bowman, Frederic Berger, Takayuki Kohchi, Yasukazu Nakamura
- Organizer
  Taiwan-Japan Plant Biology 2023 (TJPB 2023)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K15783
[Presentation] MedakaBase：メダカの包括的かつよりユーザー志向なオミクスリソース提供をめざして2022
- Author(s)
  矢倉勝、安齋賢、谷澤靖洋、中村保一、成瀬清、工樂樹洋
- Organizer
  第45回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-20K15783
[Presentation] Marpolbase: ゼニゴケのための遺伝子情報および発現量データベースの開発2022
- Author(s)
  谷澤靖洋, 川村省吾, Romani Facundo, 矢倉勝, 望月孝子, 坂本美佳, 山岡尚平, 西浜竜一, 中村保一, 大和勝幸, Bowman John, 河内孝之
- Organizer
  第64回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-20K15783
[Presentation] Marpolbase: ゼニゴケのための遺伝子情報および発現量データベースの開発2021
- Author(s)
  谷澤靖洋, 川村昇吾, 矢倉勝, 坂本美佳, 望月孝子, 山岡尚平, 西浜竜一, 大和勝幸, 河内孝之, Liu, Chang, Berger, Frederic, 中村保一
- Organizer
  第62回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-20K15783
[Presentation] ユーストマの全ゲノム解読とDNAマーカー開発2021
- Author(s)
  川勝恭子, 豊田敦, 永野惇, 川勝泰二, 中野善公, 今村仁, 福田直子, 久松完, 山口博康, 望月孝子, 谷澤靖洋, 坂本美佳, 中村保一
- Organizer
  日本育種学会第139回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Marpolbase : development of the genome and expression database for the liverwort Marchantia polymorphaMarpolbase : ゼニゴケのための遺伝子情報および発現量データベースの開発2021
- Author(s)
  谷澤靖洋, 川村昇吾, 矢倉勝, 坂本美佳, 望月孝子, 山岡尚平, 西浜竜一, 大和勝幸, 河内孝之, Liu, Chang, Berger, Frédéric, 中村保一
- Organizer
  第62回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ユーストマの全ゲノム解読とDNAマーカー開発(学会のプレスリリース課題に選定されたとのことhttps://www.nacos.com/jsb/06/06press.html)2021
- Author(s)
  川勝恭子、豊田敦、永野惇、川勝泰二、中野善公、今村仁、福田直子、久松完、山口博康、望月孝子、谷澤靖洋、坂本美佳、中村保一
- Organizer
  日本育種学会第139回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 様々なヘテロ接合度の生物を用いたハプロイドセット構築のためのゲノムアセンブリ手法の評価2021
- Author(s)
  望月孝子, 坂本美佳, 谷澤靖洋, 中山卓郎, 谷藤吾朗, 神川龍馬, 中村保一
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Introduction to Microbial Genome Analysis2020
- Author(s)
  谷澤靖洋
- Organizer
  日本-インドネシア遺伝資源バイオインフォマティックスオンライン講習会
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Chromosome-level assembly of liverwort Marchantia polymorpha and updates of the genome database MarpolBase.2020
- Author(s)
  Yasuhiro Tanizawa, Masaru Yagura, Mika Sakamoto, Takako Mochizuki, Sean A. Montgomery, Bence Galik, Shohei Yamaoka, Ryuichi Nishihama, Katsuyuki T. Yamato, Takayuki Kohchi, Yasukazu Nakamura, Chang Liu, and Freédéric Berger
- Organizer
  Plant and Animal Genomics 2020
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 染色体レベルのゼニゴケ参照ゲノムの構築とゲノムデータベースの開発2020
- Author(s)
  谷澤靖洋, 矢倉勝, 坂本美佳, 望月孝子, Montgomery, Sean A., Galik, Bence, 山岡尚平, 西浜竜一, 大和勝幸, 河内孝之, Berger, Frédéric, Liu, Chang, 中村保一
- Organizer
  第61回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] データサイエンティスト養成セッション : 実践的次世代シークエンス解析 : 微生物ゲノム解析2020
- Author(s)
  谷澤靖洋
- Organizer
  2020年日本バイオインフォマティクス学会年会・第9回生命医薬情報学連合大会(IIBMP2020)
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ゼニゴケゲノムのアップデートにまつわるetc.2019
- Author(s)
  谷澤靖洋, 矢倉勝, 望月孝子, 坂本美佳, 山岡尚平, 西浜竜一, Sean A. Montgomery, Chang Liu, Bence Galik, Frederic Berger, 大和勝幸, 河内孝之, 中村保一
- Organizer
  第2回植物インフォマティクス研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Intracellular evolution through loss of photosynthesis and adaptation to a heterotrophic lifestyle revealed by the genome analysis of a non-photosynthetic diatom2019
- Author(s)
  Ryoma Kamikawa, Takuro Nakayama, Daniel Moog, Takayuki Fujiwara, Ryo Onuma, Shin-ya Miyagishima, Keitaro Kume, Ugo Cenci, Bernard Henrissat, Kaori Oyama, Misako Kato, Hideaki Miyashita, Goro Tanifuji, Yasuhiro Tanizawa, Takako Mochizuki, Mika Sakamoto, Yasukazu Nakamura
- Organizer
  14th International Colloquium on Endocytobiology and Symbiosis, Lille, France
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 珪藻のゲノム解析支援 : ゲノムアセンブリからデータベース公開まで2019
- Author(s)
  坂本美佳, 望月孝子, 谷澤靖洋, 矢倉勝, 谷藤吾朗, 神川龍馬, 中村保一
- Organizer
  第2回植物インフォマティクス研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] DFAST : Prokaryotic Genome Annotation Pipeline for Faster Data Submission to Public Sequence Database2019
- Author(s)
  Yasuhiro Tanizawa, Takatomo Fujisawa, Masanori Arita, and Yasukazu Nakamura
- Organizer
  ASM Microbe 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Update of MarpolBase to accommodate ver. 5.1 gene annotation.2019
- Author(s)
  Yasuhiro Tanizawa, Masaru Yagura, Mika Sakamoto, Takako Mochizuki, Sean A. Montgomery, Bence Galik, Shohei Yamaoka, Ryuichi Nishihama, Katsuyuki T. Yamato, Takayuki Kohchi, Yasukazu Nakamura, Chang Liu, and Frédéric Berger
- Organizer
  Marchantia Workshop 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Database for the Chromosome-Level Assembly for a Liverwort Marchantia polymorpha2019
- Author(s)
  Nakamura, Y., Tanizawa, Y., Mochizuki, T., et al.
- Organizer
  Plant and Animal Genomics 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ゼニゴケMarchantia polymorphaと珪藻Nitzschia sp. NIES4239のゲノム解析2019
- Author(s)
  望月孝子, 谷澤靖洋, 山岡尚平, 西浜竜一, 金澤建彦, 上田貴志, 大和勝幸, 河内孝之, 谷藤吾朗, 神川龍馬, 中村保一
- Organizer
  第60回日本植物生理学会年会(名古屋)
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Development of Marchantia Gene Nomenclature Database2018
- Author(s)
  Yasuhiro Tanizawa, Takako Mochizuki, Shohei Yamaoka, Ryuichi Nishihama, Takehiko Kanazawa, Takashi Ueda, Katsuyuki T. Yamato, Takayuki Kohchi, and Yasukazu Nakamura
- Organizer
  EMBO Workshop
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] THE COMPLETE GENOME OF A NON-PHOTOSYNTHETIC DIATOM AND ITS PLASTIDAL SULFOLIPID BIOSYNTHESIS2018
- Author(s)
  Kamikawa R, Oyama K, Tanizawa Y, Mochizuki T, Nakayama T, Tanifuji, G, Nakamura Y, Kato M, Miyashita H
- Organizer
  ISOP/PSA
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] MarpolBase : ゼニゴケゲノムデータベースの構築2018
- Author(s)
  望月孝子、谷澤靖洋、長崎英樹、山岡尚平、西浜竜一、金澤建彦、上田貴志、大和勝幸、河内孝之、中村保一
- Organizer
  第59回日本植物生理学会年会(札幌)
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Marpolbase : Construction of the Marchantia polymorpha Genome Database2018
- Author(s)
  Takako Mochizuki, Yasuhiro Tanizawa, Shohei Yamaoka, Ryuichi Nishihama, Takehiko Kanazawa, Takashi Ueda, Katsuyuki T, Yamato, Takayuki Kohchi, and Yasukazu Nakamura
- Organizer
  EMBO Workshop
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] MarpolBase : Construction of the Marchantia polymorpha Genome Database2018
- Author(s)
  Takako Mochizuki, Yasuhiro Tanizawa, Hideki Nagasaki, Shohei Yamaoka, Ryuichi Nishihama, Takehiko Kanazawa, Takashi Ueda, Katsuyuki T. Yamato, Takayuki Kohchi, and Yasukazu Nakamura
- Organizer
  Plant and Animal Genome XXVI
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Towards Better Genome Annotation.2017
- Author(s)
  Yasuhiro Tanizawa and Yasukazu Nakamura
- Organizer
  Symposium on "Genome Evolution at Mishima"(GEM)
- Place of Presentation
  三島
- Year and Date
  2017-03-27
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Bacterial genome annotation web-platform DFAST : Toward faster genome publication2017
- Author(s)
  Y Tanizawa, T Fujisawa, M Arita, Y Nakamura
- Organizer
  NIG International Symposium 2017 Commemorationg the 30th Anniversary of DDBJ. Life, Environment, and Evolution Revealed by Genomes
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] DFAST : a flexible prokaryotic genome annotation pipeline for faster genome publication2017
- Author(s)
  Y Tanizawa, T Fujisawa, Y Nakamura
- Organizer
  The 28th International Conference on Genome Informatics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] MarpolBase : Genome Database for Marchantia polymorpha2017
- Author(s)
  Y Tanizawa, T Mochizuki, Y Nakamura
- Organizer
  The 65th NIBB Conference : Renaissance of Marchantia polymorpha
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Bacterial genome annotation web-platform DFAST-Toward faster genome publication.2017
- Author(s)
  Yasuhiro Tanizawa and Yasukazu Nakamura
- Organizer
  Advanced Genome Science International Symposium “The Start of New Genomics”
- Place of Presentation
  東京
- Year and Date
  2017-01-10
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279

1. TOYODA Atsushi (10267495)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
2. Ogura Yoshitoshi (40363585)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. KOHARA Yuji (70135292)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. Kato Kazuto (10202011)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
5. Kawashima Minae (00396706)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. Suzuki Yutaka (40323646)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. MITSUI Jun (70579862)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. Hayashi Tetsuya (10173014)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. TOKINO Takashi (40202197)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
10. Kurokawa Ken (20343246)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. Nakamura Yasukazu (60370920)

# of Collaborated Projects: 1 results

# of Collaborated Products: 28 results
12. Noguchi Hideki (50333349)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. IWASAKI WATARU (50545019)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. Morishita Shinichi (90292854)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. Asai Kiyoshi (30356357)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. Kasahara Masahiro (60376605)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. Ito Takehiko (90501106)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
18. Yamada Takuji (10437262)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. KUHARA Satoshi (00153320)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
20. Takahashi Hiroki (60548460)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
21. Sakakibara Yasubumi (10287427)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
22. HAMADA MICHIAKI (00596538)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
23. Takagi Toshihisa (30110836)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
24. SESE JUN (40361539)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
25. Ida Ryuichi (40127543)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
26. YAMAGATA Zentaro (10210337)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
27. Masui Toru (50150082)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
28. Muto Kaori (50345766)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
29. Kodama Satoshi (80372366)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
30. Setoyama Koichi (00379075)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
31. Kokado Minori (20706650)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
32. Ohashi Noriko (50739430)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
33. FUJIYAMA Asao (60142311)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
34. INOUE Ituro (00192500)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
35. Nakaoka Hirofumi (70611193)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
36. Sugano Sumio (60162848)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
37. Tsuji Shoji (70150612)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
38. Gotoh Yasuhiro (20558358)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
39. Nakamura Keiji (60706216)

# of Collaborated Projects: 1 results

# of Collaborated Products: 28 results
40. Okuno Miki (30814462)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
41. Nakase Hiroshi (60362498)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
42. SASAKI Yasushi (70322328)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
43. IDOGAWA Masashi (00404749)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
44. Tange Shoichiro (40571211)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
45. Mori Hiroshi (40610837)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
46. OGASAWARA Osamu (00435512)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
47. Kondo Shinji (30415161)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
48. kiryu hisanori (80415778)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
49. Kajitani Rei (40756706)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
50. TASHIRO Kosuke (00192170)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
51. Frith Martin (40462832)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
52. HIRAKAWA Hideki (80372746)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
53. Suzuki Hiromu (20381254)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
54. NOSHO KATSUHIKO (10597339)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
55. KAI Masahiro (80260777)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
56. 辻雅晴 (70756923)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
57. 工藤栄 (40221931)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
58. 内田雅己 (70370096)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
59. 石原潤一 (40732409)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
60. ISHIHARA Tomoko

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
61. 河内孝之

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
62. 中山卓郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
63. 山岡尚平

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Tanizawa Yasuhiro 谷澤 靖洋

Research Projects

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Co-Researchers

Elucidating the changes in fungal diversity in the Antarctic and Arctic regions and establishing polar-derived fungi as a genetic resource

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ゼニゴケゲノムDBの拡張開発と仮想化技術を応用した高可搬性ゲノムDBの開発Principal Investigator

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Platform for Advanced Genome Science

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[Book] Gene Prediction Methods and Protocols2019

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[Book] Methods in Molecular Biology, Gene Prediction2019

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[Book] 次世代シークエンサーDRY解析教本 改訂第2版2019

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[Journal Article] 特集/コケ植物:遺伝子資源と機能応用「ゲノム情報とデータベースの利用」2023

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[Journal Article] MarpolBase Expression: A Web-Based, Comprehensive Platform for Visualization and Analysis of Transcriptomes in the Liverwort <i>Marchantia polymorpha</i>2022

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[Journal Article] Genome evolution of a nonparasitic secondary heterotroph, the diatom <i>Nitzschia putrida</i>2022

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[Journal Article] Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system2021

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[Journal Article] Whole-exome sequencing of 79 xenografts as a potential approach for the identification of genetic variants associated with sensitivity to cytotoxic anticancer drugs2020

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[Journal Article] Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin2020

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[Journal Article] Large-scale genome analysis of bovine commensal Escherichia coli reveals that bovine-adapted E. coli lineages are serving as evolutionary sources of the emergence of human intestinal pathogenic strains.2019

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[Journal Article] DFAST : a flexible prokaryotic genome annotation pipeline for faster genome publication2018

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[Journal Article] Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri2017

Author(s)

Tanizawa Yasuhiro 谷澤靖洋

[Book] 次世代シークエンサーDRY解析教本改訂第2版2019

[Presentation] データサイエンティスト養成セッション : 実践的次世代シークエンス解析 : 微生物ゲノム解析2020