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Fukai Shuya  深井 周也

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FUKAI Shuya  深井 周也

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Researcher Number 10361792
Other IDs
Affiliation (Current) 2022: 京都大学, 理学研究科, 教授
2022: 東京大学, 定量生命科学研究所, 委嘱教授
Affiliation (based on the past Project Information) *help 2020 – 2021: 京都大学, 理学研究科, 教授
2019: 東京大学, 定量生命科学研究所, 委嘱教授
2018: 東京大学, 定量生命科学研究所, 准教授
2016 – 2017: 東京大学, 分子細胞生物学研究所, 准教授
2007 – 2015: The University of Tokyo, 放射光連携研究機構, 准教授 … More
2013 – 2014: 東京大学, 学内共同利用施設等, 准教授
2007: The University of Tokyo, 学内共同利用施設等, 准教授
2006: 東京工業大学, バイオ研究基盤支援総合センター, 助教授
2004 – 2005: 東京工業大学, 大学院・生命理工学研究科, 助手 Less
Review Section/Research Field
Principal Investigator
Biological Sciences / Structural biochemistry / Functional biochemistry / Complex systems / Medium-sized Section 43:Biology at molecular to cellular levels, and related fields
Except Principal Investigator
Biological Sciences / Structural biochemistry / Complex systems
Keywords
Principal Investigator
X線結晶構造解析 / 小胞輸送 / 膜融合 / 分子間相互作用 / 膜タンパク質 / 低分子量GTPase / 電子顕微鏡 / 開口放出 / シグナル伝達 / 分子認識 … More / 構造生物学 / 繋留因子 / ユビキチン / small GTPase / 膜透過装置 / 生体分子 / 蛋白質 / タンパク質複合体 / シャペロン / ATPase / イオン輸送体 / 受容体 / イオンチャネル / Gタンパク質共役型受容体 / 超分子複合体 / グアニンヌクレオチド交換因子 / 炎症シグナル / DNA損傷応答 / DNA修復 / X線結晶構造解析 / タンパク質工学 / ケミカルバイオロジー / キメラ化合物 / 膜受容体 / てんかん / シナプス / 足場タンパク質 / パルミトイル化 / パルミトリル化 … More
Except Principal Investigator
構造生物学 / ユビキチン / 植物 / 膜蛋白質 / 膜輸送体 / H^+ポンプ / 抗体断片 / 結晶化 / X線結晶解析 / 生化学 / 細胞生物学 / 分子生物学 / 生物物理学 / タンパク質 / 相互作用 / X線結晶学 / NMR / 電子顕微鏡 / 複合体 / シグナル伝達 / 分子認識 / DNA修復 / タンパク質複合体 / X線結晶構造解析 / X線結晶構造解析 / ケミカルバイオロジー / ステープルペプチド / 翻訳後修飾 / タンパク質分解 Less
  • Research Projects

    (18 results)
  • Research Products

    (178 results)
  • Co-Researchers

    (76 People)
  •  Ubiquitin structural biology providing the molecular basis for chemo-technologiesPrincipal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2018 – 2022
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Complex systems
    • Research Institution
      Kyoto University
      The University of Tokyo
  •  Structural analysis of the epilepsy-related protein complex LGI1-ADAM22-PSD-95 and its regulatory factorsPrincipal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2018 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 43:Biology at molecular to cellular levels, and related fields
    • Research Institution
      Kyoto University
      The University of Tokyo
  •  New frontier for ubiquitin biology driven by chemo-technologies

    • Principal Investigator
      佐伯 泰
    • Project Period (FY)
      2018 – 2022
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Complex systems
    • Research Institution
      Tokyo Metropolitan Institute of Medical Science
  •  BRCC36複合体によるK63結合型ユビキチン鎖特異的切断メカニズムの解明Host Researcher

    • Host Researcher
      深井 周也
    • Project Period (FY)
      2015 – 2017
    • Research Category
      Grant-in-Aid for JSPS Fellows
    • Research Field
      Structural biochemistry
    • Research Institution
      The University of Tokyo
  •  Structural basis for ubiquitin chain-mediated DNA damage responsesPrincipal Investigator

    • Principal Investigator
      Fukai Shuya
    • Project Period (FY)
      2012 – 2015
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Research Field
      Structural biochemistry
    • Research Institution
      The University of Tokyo
  •  Structural basis of cell-signaling complexes mediating signal perception, transduction and responses.

    • Principal Investigator
      HAKOSHIMA Toshio
    • Project Period (FY)
      2010 – 2015
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      Nara Institute of Science and Technology
  •  X-ray crystallography of molecular complexes regulating vesicular traffickingPrincipal Investigator

    • Principal Investigator
      FUKAI Shuya
    • Project Period (FY)
      2010 – 2014
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Structural biology of polyubuiquitin chain recognitionPrincipal Investigator

    • Principal Investigator
      FUKAI Shuya
    • Project Period (FY)
      2009 – 2011
    • Research Category
      Grant-in-Aid for Young Scientists (A)
    • Research Field
      Structural biochemistry
    • Research Institution
      The University of Tokyo
  •  Exocyst複合体の再構成と構造解析Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2008 – 2009
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  膜蛋白質のコンフォメーション特異的な結晶化を可能にする抗体断片の開発

    • Principal Investigator
      三村 久敏
    • Project Period (FY)
      2008 – 2009
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Yipタンパク質ファミリーの結晶構造解析Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2007 – 2008
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Structural basis for the activation of Rab GTPasesPrincipal Investigator

    • Principal Investigator
      FUKAI Shuya
    • Project Period (FY)
      2007 – 2008
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Structural biochemistry
    • Research Institution
      The University of Tokyo
  •  開口放出で働く繋留因子Exocyst複合体の立体構造解析Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2006 – 2007
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
      Tokyo Institute of Technology
  •  繋留因子群の立体構造解析による膜融合制御機構の解明Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2005 – 2006
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      Tokyo Institute of Technology
  •  分子シャペロンのX線結晶構造解析Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2005 – 2006
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      Tokyo Institute of Technology
  •  X線結晶構造解析に基づく嗅覚・味覚・温覚レセプターの情報変換メカニズムの解明Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2005 – 2006
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      Tokyo Institute of Technology
  •  開口放出を制御するタンパク質複合体群の立体構造解析Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2005 – 2006
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      Tokyo Institute of Technology
  •  ラットSec6/8複合体の構造・機能解析による,膜融合制御機構の解明Principal Investigator

    • Principal Investigator
      深井 周也
    • Project Period (FY)
      2004 – 2005
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Functional biochemistry
    • Research Institution
      Tokyo Institute of Technology

All 2021 2020 2019 2018 2017 2016 2015 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005

All Journal Article Presentation Book

  • [Book] Advanced Methods in Structural Biology (Springer Protocols Handbooks)2016

    • Author(s)
      Shuya Fukai
    • Total Pages
      290
    • Publisher
      Springer
    • Data Source
      KAKENHI-PROJECT-24247014
  • [Book] 日本結晶学会誌52巻特集構造生物学研究の新展開2010

    • Author(s)
      佐藤裕介,深井周也
    • Publisher
      日本結晶学会
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 細胞工学 29巻[特集]ユビキチン修飾系の多彩な機能2010

    • Author(s)
      深井周也
    • Publisher
      秀潤社
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 細胞工学29巻[特集]ユビキチン修飾系の多彩な機能2010

    • Author(s)
      深井周也
    • Publisher
      秀潤社
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 細胞工学 29巻[特集]ユビキチン修飾系の多彩な機能2010

    • Author(s)
      深井周也
    • Publisher
      秀潤社
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Book] 日本結晶学会誌 52巻 特集 構造生物学研究の新展開2010

    • Author(s)
      佐藤裕介, 深井周也
    • Publisher
      日本結晶学会
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Book] 日本結晶学会誌52巻特集構造生物学研究の新展開2010

    • Author(s)
      佐藤裕介, 深井周也
    • Publisher
      日本結晶学会
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 生体の科学60巻[特集]ユビキチン化による生体機能の調節2009

    • Author(s)
      佐藤裕介, 深井周也
    • Publisher
      金原一郎記念医学医療振興財団/医学書院
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 実験医学2月号2009

    • Author(s)
      深井周也、佐藤裕介、吉川梓
    • Publisher
      羊土社
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Book] 生化学 81巻 みにれびゅう2009

    • Author(s)
      深井周也
    • Publisher
      日本生化学会
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Book] 実験医学2月号2009

    • Author(s)
      深井周也、佐藤裕介、吉川梓
    • Publisher
      羊土社
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Book] 生体の科学60巻[特集]ユビキチン化による生体機能の調節2009

    • Author(s)
      佐藤裕介,深井周也
    • Publisher
      金原一郎記念医学医療振興財団/医学書院
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 生体の科学 60巻[特集]ユビキチン化による生体機能の調節2009

    • Author(s)
      佐藤裕介, 深井周也
    • Publisher
      金原一郎記念医学医療振興財団/医学書院
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Book] 生化学81巻みにれびゅう2009

    • Author(s)
      深井周也
    • Publisher
      日本生化学会
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 生化学2009

    • Author(s)
      深井周也
    • Publisher
      日本生化学会
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Book] 実験医学2月号2009

    • Author(s)
      深井周也、佐藤裕介、吉川梓
    • Publisher
      羊土社
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Canonical versus non-canonical transsynaptic signaling of neuroligin 3 tunes development of sociality in mice2021

    • Author(s)
      Yoshida T, Yamagata A, Imai A, Kim J, Izumi H, Maenaka K, Shimada T, Fukata M, Nishijo H, Takao K, Okabe S, Tabuchi K, Mishina M, Mori H, Fukai S.
    • Journal Title

      Nature Communications

      Volume: 12(1) Issue: 1 Pages: 1848-1848

    • DOI

      10.1038/s41467-021-22059-6

    • NAID

      120006996978

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K06716, KAKENHI-PROJECT-19K22439, KAKENHI-PROJECT-19K22548, KAKENHI-PROJECT-20K21444, KAKENHI-PROJECT-18H05213, KAKENHI-PUBLICLY-19H04744, KAKENHI-PUBLICLY-19H04974, KAKENHI-PUBLICLY-19H05010, KAKENHI-PUBLICLY-20H04915, KAKENHI-ORGANIZER-20H05894, KAKENHI-PLANNED-20H05895, KAKENHI-PROJECT-18H03983, KAKENHI-PROJECT-20H00459, KAKENHI-PROJECT-20H00481, KAKENHI-PROJECT-19H03331, KAKENHI-PROJECT-19H03538, KAKENHI-PROJECT-19J10216, KAKENHI-PROJECT-18K06888, KAKENHI-PROJECT-16H06276
  • [Journal Article] LGI1?ADAM22?MAGUK configures transsynaptic nanoalignment for synaptic transmission and epilepsy prevention2021

    • Author(s)
      Fukata Yuko、Chen Xiumin、Chiken Satomi、Hirano Yoko、Yamagata Atsushi、Inahashi Hiroki、Sanbo Makoto、Sano Hiromi、Goto Teppei、Hirabayashi Masumi、Kornau Hans-Christian、Pruss Harald、Nambu Atsushi、Fukai Shuya、Nicoll Roger A.、Fukata Masaki
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 118

    • DOI

      10.1073/pnas.2022580118

    • NAID

      120006976050

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K22439, KAKENHI-PROJECT-19K22548, KAKENHI-PUBLICLY-19H04974, KAKENHI-PUBLICLY-20H04915, KAKENHI-PROJECT-18H03983, KAKENHI-PROJECT-20H00459, KAKENHI-PROJECT-18H02540, KAKENHI-PROJECT-19H03331
  • [Journal Article] Subquinocin. a small molecule inhibitor of CYLD and USP-family deubiquitinating enzymes, promotes NF-κB signaling.2020

    • Author(s)
      Yamanaka S, Sato Y, Oikawa D, Goto E, Fukai S, Tokunag F, Sawasaki T.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 524 Issue: 1 Pages: 1-7

    • DOI

      10.1016/j.bbrc.2019.12.049

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K06967, KAKENHI-PROJECT-19K22541, KAKENHI-PLANNED-16H06575, KAKENHI-PLANNED-16H06579, KAKENHI-PLANNED-18H05501, KAKENHI-PUBLICLY-19H05292, KAKENHI-PUBLICLY-19H05296, KAKENHI-PROJECT-18H02619, KAKENHI-PROJECT-17K07261, KAKENHI-PROJECT-16H06276
  • [Journal Article] Frontiers in structural biology of synaptic adhesion molecules2020

    • Author(s)
      深井 周也
    • Journal Title

      生化学

      Volume: 92 Issue: 2 Pages: 166-178

    • DOI

      10.14952/SEIKAGAKU.2020.920166

    • NAID

      40022245228

    • ISSN
      0037-1017
    • Language
      Japanese
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18H03983
  • [Journal Article] Roles of type-IIa receptor protein tyrosine phosphatases as synaptic organizers2020

    • Author(s)
      Fukai S, Yoshida T.
    • Journal Title

      FEBS Journal

      Volume: -

    • DOI

      10.1111/febs.15666

    • Description
      in press
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K21444, KAKENHI-PUBLICLY-19H04744, KAKENHI-PROJECT-18H03983, KAKENHI-PROJECT-16H06276
  • [Journal Article] A Human DUB Protein Array for Clarification of Linkage Specificity of Polyubiquitin Chain and Application to Evaluation of Its Inhibitors. Biomedicines.2020

    • Author(s)
      Takahashi H, Yamanaka S, Kuwada S, Higaki K, Kido K, Sato Y, Fukai S, Tokunaga F, Sawasaki T.
    • Journal Title

      Biomedicines

      Volume: 4 Pages: 152-152

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-18H05501
  • [Journal Article] Molecular bases for HOIPINs-mediated inhibition of LUBAC and innate immune responses2020

    • Author(s)
      Oikawa D, Sato Y, Ohtake F, Komakura K, Hanada K, Sugawara K, Terawaki S, Mizukami Y, Phuong HT, Iio K, Obika S, Fukushi M, Irie T, Tsuruta D, Sakamoto S, Tanaka K, Saeki Y, Fukai S, Tokunaga F.
    • Journal Title

      Commun Biol.

      Volume: 3 Pages: 16-16

    • DOI

      10.1038/s42003-020-0882-8

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K22541, KAKENHI-ORGANIZER-16H06429, KAKENHI-PLANNED-18H05501, KAKENHI-PROJECT-18H02619, KAKENHI-PROJECT-17K19560, KAKENHI-PROJECT-19K22968, KAKENHI-INTERNATIONAL-16K21723, KAKENHI-PLANNED-16H06575, KAKENHI-PUBLICLY-19H04837, KAKENHI-PROJECT-19H00997, KAKENHI-PROJECT-18K06937, KAKENHI-PLANNED-18H05498, KAKENHI-PROJECT-16H06276
  • [Journal Article] Structural insights into selective interaction between type IIa receptor protein tyrosine phosphatases and Liprin-α.2020

    • Author(s)
      Wakita M, Yamagata A, Shiroshima T, Izumi H, Maeda A, Sendo M, Imai A, Kubota K, Goto-Ito S, Sato Y, Mori H, Yoshida T, Fukai S.
    • Journal Title

      Nature Communications

      Volume: 11 Pages: 649-649

    • DOI

      10.1038/s41467-020-14516-5

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K06888, KAKENHI-PUBLICLY-19H04744, KAKENHI-PROJECT-18H03983, KAKENHI-PROJECT-19H03162, KAKENHI-PROJECT-16H06276
  • [Journal Article] Insights into the mechanisms of epilepsy from structural biology of LGI1-ADAM222020

    • Author(s)
      Atsushi Yamagata & Shuya Fukai
    • Journal Title

      Cellular and Molecular Life Sciences

      Volume: 77 Pages: 267-274

    • DOI

      10.1007/s00018-019-03269-0

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18H03983
  • [Journal Article] Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein2019

    • Author(s)
      Takahashi Tomio S、Sato Yusuke、Yamagata Atsushi、Goto-Ito Sakurako、Saijo Masafumi、Fukai Shuya
    • Journal Title

      Nucleic Acids Research

      Volume: 47 Pages: 3784-3794

    • DOI

      10.1093/nar/gkz081

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-18H05501, KAKENHI-PROJECT-16H04749, KAKENHI-PROJECT-16H04750
  • [Journal Article] Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction2019

    • Author(s)
      Yamagata, A., Fukai, S.
    • Journal Title

      Nature Communications

      Volume: 54 Pages: 3964-3964

    • DOI

      10.1016/j.sbi.2019.01.001

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18H03983, KAKENHI-PROJECT-16H04749
  • [Journal Article] Structural insights into ubiquitin recognition and Ufd1 interaction of Np14.2019

    • Author(s)
      Sato, Y., Tsuchiya, H., Yamagata, A., Okatsu, K., Tanaka, K., Saeki, Y., and Fukai, S.
    • Journal Title

      Nat Commun.

      Volume: 10 Pages: 1-13

    • DOI

      10.1038/s41467-019-13697-y

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-ORGANIZER-18H05497, KAKENHI-PLANNED-18H05498, KAKENHI-PLANNED-18H05501, KAKENHI-PROJECT-18H03993, KAKENHI-PROJECT-19H00997, KAKENHI-PROJECT-19H03162, KAKENHI-PROJECT-18K14913, KAKENHI-PROJECT-26000014
  • [Journal Article] Structural basis of guanine nucleotide exchange for Rab11 by SH3BP5.2019

    • Author(s)
      Goto-Ito Sakurako、Morooka Nobukatsu、Yamagata Atsushi、Sato Yusuke、Sato Ken、Fukai Shuya
    • Journal Title

      Life Sci Alliance.

      Volume: 2

    • DOI

      10.26508/lsa.201900297

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H04749, KAKENHI-PROJECT-16H04750, KAKENHI-PROJECT-17K15072, KAKENHI-PROJECT-18H03983
  • [Journal Article] Structural basis of epilepsy-related ligand?receptor complex LGI1?ADAM222018

    • Author(s)
      Yamagata Atsushi、Miyazaki Yuri、Yokoi Norihiko、Shigematsu Hideki、Sato Yusuke、Goto-Ito Sakurako、Maeda Asami、Goto Teppei、Sanbo Makoto、Hirabayashi Masumi、Shirouzu Mikako、Fukata Yuko、Fukata Masaki、Fukai Shuya
    • Journal Title

      Nat Commun

      Volume: 9 Pages: 1-13

    • DOI

      10.1038/s41467-018-03947-w

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17J07958, KAKENHI-PROJECT-18K06172, KAKENHI-PUBLICLY-17H05709, KAKENHI-PUBLICLY-17H05897, KAKENHI-PUBLICLY-18H04873, KAKENHI-PROJECT-18H03983, KAKENHI-PROJECT-16H04749, KAKENHI-PROJECT-16H04750, KAKENHI-PROJECT-17H03678, KAKENHI-PROJECT-17K14969
  • [Journal Article] Structural insights into two distinct binding modules for Lys63-linked polyubiquitin chains in RNF1682018

    • Author(s)
      Takahashi Tomio S.、Hirade Yoshihiro、Toma Aya、Sato Yusuke、Yamagata Atsushi、Goto-Ito Sakurako、Tomita Akiko、Nakada Shinichiro、Fukai Shuya
    • Journal Title

      Nature Communications

      Volume: 9 Pages: 170-170

    • DOI

      10.1038/s41467-017-02345-y

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17K15072, KAKENHI-PROJECT-26241014, KAKENHI-PROJECT-16H04750, KAKENHI-PROJECT-15F15386, KAKENHI-PROJECT-16H04749, KAKENHI-PROJECT-17K00550
  • [Journal Article] Structural insights into ubiquitin phosphorylation by PINKI.2018

    • Author(s)
      Okatsu, K., Sato, Y., Yamano, K., Matsuda, N., Negishi, L., Takahashi, A., Yamagata, A., Goto-Ito, S., Mishima, M., Ito, Y., Oka, T., Tanaka, K., and Fukai, S.
    • Journal Title

      Sci. Rep.

      Volume: 8 Pages: 10382-10382

    • DOI

      10.1038/s41598-018-28656-8

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05887, KAKENHI-PUBLICLY-17H05888, KAKENHI-PLANNED-18H05501, KAKENHI-PROJECT-16H04749, KAKENHI-PROJECT-16H04750, KAKENHI-PROJECT-17H03676, KAKENHI-PROJECT-18H02443, KAKENHI-PROJECT-26000014
  • [Journal Article] Structural basis of the interaction between Topoisomerase IIIβ and the TDRD3 auxiliary factor2017

    • Author(s)
      Goto-Ito S, Yamagata A, Takahashi TS, Sato Y, Fukai S.
    • Journal Title

      Scientific reports

      Volume: 7 Pages: 42123-42123

    • DOI

      10.1038/srep42123

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-15H01175, KAKENHI-PROJECT-16H04749, KAKENHI-PROJECT-16H04750, KAKENHI-PROJECT-15F15386, KAKENHI-PROJECT-24687012
  • [Journal Article] Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity.2015

    • Author(s)
      Sato, Y., Goto, E., Shibata, Y., Kubota, Y., Yamagata, A., Goto-Ito, S., Kubota, K., Inoue, J., Takekawa, M., Tokunaga, F. and Fukai, S.
    • Journal Title

      Nat Struct Mol Biol.

      Volume: 22 Pages: 222-222

    • DOI

      10.1038/nsmb.2970

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-ORGANIZER-22117001, KAKENHI-PLANNED-22117003, KAKENHI-PLANNED-22117006, KAKENHI-PLANNED-22121003, KAKENHI-PROJECT-24247014, KAKENHI-PROJECT-24390079, KAKENHI-PROJECT-24570126, KAKENHI-PROJECT-24687012, KAKENHI-PUBLICLY-25112505, KAKENHI-PUBLICLY-25117711, KAKENHI-PROJECT-25650003, KAKENHI-PROJECT-25670137, KAKENHI-PROJECT-26840062, KAKENHI-PROJECT-15K08259, KAKENHI-PLANNED-22117002
  • [Journal Article] Mechanisms of splicing-dependent trans-synaptic adhesion by PTPδ-IL1RAPL1/IL-1RAcP for synaptic differentiation.2015

    • Author(s)
      Yamagata A., Yoshida, T., Sato, Y., Goto-Ito, S., Uemura, T., Maeda, A., Shiroshima, T., Iwasawa-Okamoto, S., Mori, H., Mishina, M., Fukai , S.
    • Journal Title

      Nat Commun.

      Volume: 6 Pages: 6926-6926

    • DOI

      10.1038/ncomms7926

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PLANNED-22121003, KAKENHI-PLANNED-22123008, KAKENHI-PROJECT-24249014, KAKENHI-PUBLICLY-25121710, KAKENHI-PROJECT-25290021, KAKENHI-PROJECT-26640039, KAKENHI-PUBLICLY-15H01175, KAKENHI-PROJECT-25650018, KAKENHI-PROJECT-26640038, KAKENHI-PROJECT-25293057, KAKENHI-PROJECT-24687012
  • [Journal Article] Structure of Slitrk2-PTPδ complex reveals mechanisms for splicing-dependent trans-synaptic adhesion.2015

    • Author(s)
      Yamagata A., Sato, Y., Goto-Ito, S., Uemura, T., Maeda, A., Shiroshima, T., Yoshida, T., Fukai , S.
    • Journal Title

      Sci Rep.

      Volume: 5 Pages: 9686-9686

    • DOI

      10.1038/srep09686

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PLANNED-22121003, KAKENHI-PUBLICLY-15H01175, KAKENHI-PROJECT-25650018, KAKENHI-PROJECT-26640038, KAKENHI-PROJECT-25293057, KAKENHI-PROJECT-24687012
  • [Journal Article] Structural Basis for Ubiquitin Recognition by Ubiquitin-Binding Zinc Finger of FAAP20.2015

    • Author(s)
      Toma, A, Takahashi, T. S., Sato, Y., Yamagata, A., Goto-Ito, S., Nakada, S., Fukuto, A., Horikoshi, Y., Tashiro, S., Fukai, S.
    • Journal Title

      PLOS ONE

      Volume: 10 Pages: 1-15

    • DOI

      10.1371/journal.pone.0120887

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PLANNED-22121003, KAKENHI-PROJECT-24247014, KAKENHI-PROJECT-24687012, KAKENHI-PUBLICLY-25112505, KAKENHI-PUBLICLY-25117711, KAKENHI-PROJECT-25640066
  • [Journal Article] Switching and emergence of CTL epitopes in HIV-1 infection.2014

    • Author(s)
      Han, C., Kawana-Tachikawa, A., Shimizu, A., Zhu D., Nakamura, H., Adachi, E., Kikuchi, T., Koga, M., Koibuchi, T., Gao, G.F., Sato, Y., Yamagata, A., Martin, E., Fukai, S., Brumme, Z.L.,Iwamoto, A.
    • Journal Title

      Retrovirology

      Volume: 11 Pages: 38-38

    • DOI

      10.1186/1742-4690-11-38

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PLANNED-22121003, KAKENHI-PROJECT-24570126, KAKENHI-PROJECT-25293226
  • [Journal Article] Core structures of ubiquitin dictate its dynamics and function2014

    • Author(s)
      Fukai, S.
    • Journal Title

      Journal of Molecular Biology

      Volume: 426 Pages: 1367-1369

    • DOI

      10.1016/j.jmb.2013.12.008

    • Data Source
      KAKENHI-PLANNED-22121003, KAKENHI-PROJECT-24247014
  • [Journal Article] Switching and emergence of CTL epitopes in HIV-1 infection2014

    • Author(s)
      Han, C. Kawana-Tachikawa, A., Shimizu, A., Zhu, D., Nakamura, H., Adachi, E., Kikuchi, T., Koga, M., Koibuchi, T., Gao, G.G., Sato, Y., Yamagata, A., Martin, E., Fukai, S., Brumme, Z.L., Iwamoto, A.
    • Journal Title

      Retrovirology

      Volume: 未定

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Journal Article] Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection.2013

    • Author(s)
      Shimizu, A., Kawana-Tachikawa. A., Yamagata, A., Han, C., Zhu, D., Sato, Y., Nakamura, H., Koibuchi, T., Carlson, J., Martin, E., Brumme, C.J., Shi, Y., Gao, G.F., Brumme, Z.L., Fukai, S., Iwamoto, A.
    • Journal Title

      Scientific Reports

      Volume: 3 Pages: 3097-3097

    • DOI

      10.1038/srep03097

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-22121003, KAKENHI-PROJECT-24570126, KAKENHI-PROJECT-24687012, KAKENHI-PUBLICLY-25112505, KAKENHI-PUBLICLY-25117711, KAKENHI-PROJECT-25293226
  • [Journal Article] ポリユビキチン鎖選択的結合による細胞機能制御2012

    • Author(s)
      佐藤裕介,深井周也
    • Journal Title

      生化学

      Volume: 84 Pages: 776-779

    • NAID

      10031122383

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-24247014
  • [Journal Article] Get1 stabilizes an open dimer conformation of Get3 ATPase by binding two distinct interfaces2012

    • Author(s)
      Kubota K, Yamagata A, Sato Y, Goto-Ito S, Fukai S.
    • Journal Title

      Journal of Molecular Biology

      Volume: 422(3) Pages: 366-375

    • DOI

      10.1016/j.jmb.2012.05.045

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23770107, KAKENHI-PROJECT-24247014, KAKENHI-PROJECT-24570126, KAKENHI-PROJECT-24687012, KAKENHI-PROJECT-24770089, KAKENHI-PLANNED-22121003, KAKENHI-PUBLICLY-23117514
  • [Journal Article] Molecular basis of K63-linked polyubiquitination inhibition by the interaction between human deubiquitinating enzyme OTUB1 and ubiquitin-conjugating enzyme UBC132012

    • Author(s)
      Sato Y, Yamagata A, Goto-Ito S, Kubota K, Miyamoto R, Nakada S, Fukai S.
    • Journal Title

      Proceeding of National Academy of Science

      Volume: 287(31) Pages: 25860-25868

    • DOI

      10.1074/jbc.m112.364752

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23770107, KAKENHI-PROJECT-24247014, KAKENHI-PROJECT-24570126, KAKENHI-PROJECT-24687012, KAKENHI-PROJECT-24770089, KAKENHI-PLANNED-22121003, KAKENHI-PUBLICLY-23117514, KAKENHI-PUBLICLY-23131513
  • [Journal Article] ポリユビキチン鎖選択的結合による細胞機能制御2012

    • Author(s)
      佐藤裕介,深井周也
    • Journal Title

      生化学

      Volume: 84 Pages: 776-779

    • NAID

      10031122383

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Journal Article] Structure and function of a membrane component SecDF that enhances protein export2011

    • Author(s)
      Tsukazaki, T., et al
    • Journal Title

      Nature

      Volume: 475 Pages: 235-238

    • DOI

      10.1038/nature09980

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-19058007, KAKENHI-PROJECT-20227003, KAKENHI-PROJECT-20247020, KAKENHI-PROJECT-21687009, KAKENHI-PROJECT-21770135, KAKENHI-PUBLICLY-22020008, KAKENHI-PUBLICLY-22020035, KAKENHI-PLANNED-22117007, KAKENHI-PUBLICLY-22117503, KAKENHI-PLANNED-22121003, KAKENHI-PUBLICLY-22121503, KAKENHI-PROJECT-22370070, KAKENHI-PROJECT-22687007, KAKENHI-PROJECT-23657128
  • [Journal Article] Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex2011

    • Author(s)
      Sato, Y., Fujita, H., Yoshikawa, A., Yamashita, M., Yamagata, A., Kaiser, S. E., Iwai, K., Fukai, S
    • Journal Title

      Proc.Natl.Acad.Sci.

      Volume: 108巻 Pages: 20520-20525

    • DOI

      10.1073/pnas.1109088108

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009, KAKENHI-PLANNED-22121003, KAKENHI-PROJECT-22249008, KAKENHI-PROJECT-22770099, KAKENHI-PROJECT-22770100, KAKENHI-PUBLICLY-23117514
  • [Journal Article] Structural insight into the membrane insertion of tail-anchored proteins by Get32010

    • Author(s)
      Yamagata, A., Mimura, H., Sato, Y., Yamashita, M., Yoshikawa, A., Fukai, S.
    • Journal Title

      Genes to Cells 15

      Pages: 29-41

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Structural basis for the Rho-and phosphoinositide-dependent localization of the exocyst subunit Sec32010

    • Author(s)
      Yamashita, M., Kurokawa, K., Sato, Y., Yamagata, A., Mimura, H., Yoshikawa, A., Sato, K., Nakano. A.. Fukai. S.
    • Journal Title

      Nature Structural & Molecular Biology 17

      Pages: 180-186

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural insight into the membrane insertion of tail-anchored proteins by Get32010

    • Author(s)
      Yamagata, A., Mimura, H., Sato, Y., Yamashita, M., Yoshikawa, A., Fukai, S.
    • Journal Title

      Genes to Cells 15

      Pages: 29-41

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural basis for the Rho- and phosphoinositide-dependent localization of the exocyst subunit Sec32010

    • Author(s)
      Yamashita, M., Kurokawa, K., Sato, Y., Yamagata, A., Mimura, H., Yoshikawa, A., Sato, K., Nakano, A., Fukai, S.
    • Journal Title

      Nature Structural & Molecular Biology 17

      Pages: 180-186

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin2009

    • Author(s)
      Yoshikawa, A., Sato, Y., Yamashita, M., Mimura, H., Yamagata, A., Fukai, S.
    • Journal Title

      FEBS Letters 583

      Pages: 3317-3322

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by tandem UIMs of RAP802009

    • Author(s)
      Sato, Y., Yoshikawa, A., Mimura, H., Yamashita, M., Yamagata, A., Fukai, S.
    • Journal Title

      The EMBO Journal

      Volume: 28巻 Pages: 2461-2468

    • DOI

      10.1038/emboj.2009.160

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB32009

    • Author(s)
      Sato, Y., Yoshikawa, A., Yamashita, M., Yamagata, A., Fukai, S.
    • Journal Title

      The EMBO Journal 28

      Pages: 3903-3909

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Tuberous sclerosis tumor suppressor complex-like complexes act as GTPase-activating proteins for Ral GTPases2009

    • Author(s)
      Shirakawa, R., Fukai, S., Kawato, M., Higashi, T., Kondo, H., Ikeda, T., Nakayama, E., Okawa, K., Nureki, O., Kimura, T., Kita, T., Horiuchi. H.
    • Journal Title

      The Journal of Biological Chemistry 284

      Pages: 21580-21588

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by tandem UIMs of RAP802009

    • Author(s)
      Sato, Y., Yoshikawa, A., Mimura, H., Yamashita, M., Yamagata, A., Fukai, S.
    • Journal Title

      The EMBO Journal 28

      Pages: 2461-2468

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Mechanism for the definition of elongation and termination by the class II CCA-adding enzyme2009

    • Author(s)
      Toh, Y., Takeshita, D., Numata, T., Fukai, S., Nureki, O., Tomita, K.
    • Journal Title

      The EMBO Journal 28

      Pages: 3353-3365

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin2009

    • Author(s)
      Yoshikawa, A., Sato, Y., Yamashita, M., Mimura, H., Yamagata, A., Fukai, S.
    • Journal Title

      FEBS Letters 583

      Pages: 3317-3322

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin2009

    • Author(s)
      Yoshikawa, A., Sato, Y., Yamashita, M., Mimura, H., Yamagata, A., Fukai, S.
    • Journal Title

      FEBS Letters.

      Volume: 583巻 Pages: 3317-3322

    • DOI

      10.1016/j.febslet.2009.09.028

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by tandem UIMs of RAP802009

    • Author(s)
      Sato, Y., Yoshikawa, A., Mimura, H., Yamashita, M., Yamagata, A., Fukai, S.
    • Journal Title

      The EMBO Journal 28

      Pages: 2461-2468

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Mechanism for the definition of elongation and termination by the class 11 CCA-adding enzyme2009

    • Author(s)
      Toh, Y., Takeshita, D., Numata, T., Fukai, S., Nureki, O., Tomita, K.
    • Journal Title

      The EMBO Journal 28

      Pages: 3353-3365

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB32009

    • Author(s)
      Sato, Y., Yoshikawa, A., Yamashita, M., Yamagata, A., Fukai, S.
    • Journal Title

      The EMBO Journal 28

      Pages: 3903-3909

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB32009

    • Author(s)
      Sato, Y., Yoshikawa, A., Yamashita, M., Yamagata, A., Fukai, S.
    • Journal Title

      The EMBO Journal

      Volume: 28巻 Pages: 3903-3909

    • DOI

      10.1038/emboj.2009.345

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Journal Article] Tuberous sclerosis tumor suppressor complex-like complexes act as GTPase-activating proteins for Ral GTPases2009

    • Author(s)
      Shirakawa, R., Fukai, S., Kawato, M., Higashi, T., Kondo, H., Ikeda, T., Nakayama, E., Okawa, K., Nureki, O., Kimura, T., Kita, T., Horiuchi, H.
    • Journal Title

      The Journal of Biological Chemistry 284

      Pages: 21580-21588

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Biochemical characterization of the Rho GTPase-regulated actin assembly by diaphanous-related formins, mDia1 and Daam1, in platelets2008

    • Author(s)
      Higashi, T. Ikeda, T., Shirakawa, R., Kondo, H., Kawato, M., Horiguchi, M. Okuda, T., Okawa, K., Fukai, S., Nureki, O., Kita, T., Horiuchi, H
    • Journal Title

      The Journal of Biological Chemistry 283

      Pages: 8746-8756

    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Conformational transition of Sec machinery inferred from bacterial SecYE structures2008

    • Author(s)
      Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Mori, T., Dohmae, N., Perederina, A., Sugita, Y., Vassylyev, D. G., Ito, K., Nureki, O
    • Journal Title

      Nature 455

      Pages: 988-991

    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Regulation of platelet dense granule secretion by the Ral GTPase-Exocyst pathway2008

    • Author(s)
      Kawato, M., Shirakawa, R., Kondo, H., Higashi, T., Ikeda, T., Okawa, K., Fukai, S., Kita, T., Horiuchi, H
    • Journal Title

      The Journal of Biological Chemistry 283

      Pages: 166-174

    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains2008

    • Author(s)
      Sato, Y., Yoshikawa, A., Yamagata, A., Mimura, H., Yamashita, M., Ookata, K., Nureki, O., Iwai, K., Komada, M., Fukai, S
    • Journal Title

      Nature 455

      Pages: 358-362

    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Regulation of platelet dense granule secretion by the Ral GTPase-Exocyst pathway2008

    • Author(s)
      Kawato, M., Shirakawa, R., Kondo, H., Higashi, T., Ikeda, T., Okawa, K., Fukai, S., Kita, T., Horiuchi, H.
    • Journal Title

      The Journal of Biological Chemistry 283

      Pages: 166-174

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Conformational transition of Sec machinery inferred from bacterial SecYE structures2008

    • Author(s)
      Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Mori, T., Dohmae, N., Perederina, A., Sugita, Y., Vassylyev, D.G. , Ito, K., Nureki, O.
    • Journal Title

      Nature 455

      Pages: 988-991

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Journal Article] Conformational transition of Sec machinery inferred from bacterial SecYE structures2008

    • Author(s)
      Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Mori, T., Dohmae, N., Perederina, A., Sugita, Y., Vassylyev, D. G., Ito, K., Nureki, O.
    • Journal Title

      Nature 455

      Pages: 988-991

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Regulation of platelet dense granule secretion by the Ral GTPase-Exocyst pathway2008

    • Author(s)
      Kawato, M., Shirakawa, R., Kondo, H., Higashi, T., lkeda, T., Okawa, K., Fukai, S., Kita, T., Horiuchi, H.
    • Journal Title

      The Journal of Biological Chemistry 283

      Pages: 166-174

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains2008

    • Author(s)
      Sato, Y., Yoshikawa, A., Yamagata, A., Mimura, H., Yamashita, M., Ookata, K., Nureki, O., Iwai, K., Komada, M., Fukai, S.
    • Journal Title

      Nature 455

      Pages: 358-362

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Journal Article] Structural basis for specific cleavage of Lys 63- linked polyubiquitin chains2008

    • Author(s)
      Sato, Y., Yoshikawa, A., Yamagata, A., Mimura, H., Yamashita, M., Ookata, K., Nureki, O., Iwai, K., Komada, M., Fukai, S.
    • Journal Title

      Nature 455

      Pages: 358-362

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Conformational transition of Sec machinery inferred from bacterial SecYE structures2008

    • Author(s)
      Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Mori, T., Dohmae, N., Perederina, A., Sugita, Y., Vassylyev, D. G., Ito, K., Nureki, O.
    • Journal Title

      Nature 455

      Pages: 988-991

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains2008

    • Author(s)
      Sato, Y., Yoshikawa, A., Yamagata, A., Mimura, H., Yamashita, M., Ookata, K., Nureki, O., Iwai, K., Komada, M.. Fukai. S.
    • Journal Title

      Nature 455

      Pages: 358-362

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Journal Article] Biochemical characterization of the Rho GTPase-regulated actin assembly by diaphanous-related formins, mDia1 and Daam1, in platelets2008

    • Author(s)
      Higashi, T. Ikeda, T., Shirakawa, R., Kondo, H., Kawato, M., Horiguchi, M. Okuda, T., Okawa, K., Fukai, S., Nureki, O., Kita, T., Horiuchi, H.
    • Journal Title

      The Journal of Biological Chemistry 283

      Pages: 8746-8755

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Biochemical characterization of the Rho GTPase-regulated actin assembly by diaphanous-related formins, mDial and Daaml, in platelets2008

    • Author(s)
      Higashi, T. Ikeda, T., Shirakawa, R., Kondo, H., Kawato, M., Horiguchi, M. Okuda, T., Okawa, K., Fukai, S., Nureki, O., Kita, T., Horiuchi, H.
    • Journal Title

      The Journal of Biological Chemistry 283

      Pages: 8746-8755

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Crystallization and crystallographic analysis of yeast Sec2p, a guanine nucleotide-exchange factor for the yeast Rab GTPase Sec4p2007

    • Author(s)
      Sato, Y., Fukai, S., Nureki, O.
    • Journal Title

      Acta Crystallographica F 63

      Pages: 616-619

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Crystallization and crystallographic analysis of yeast Sec2p, a guanine nucleotide-exchange factor for the yeast Rab GTPase Sec4p2007

    • Author(s)
      Sato, Y., Fukai, S., Nureki, O
    • Journal Title

      Acta Crystallographica F63巻

      Pages: 616-619

    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Crystal structure of the Sec2p-Sec4p complex in the intermediate state of the nucleotide exchange reaction2007

    • Author(s)
      Sato, Y., Fukai, S., Ishitani, R.,Nureki, O
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A 104巻

      Pages: 8305-8310

    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Crystal structure of human DAAM1 formin homology 2 domain2007

    • Author(s)
      Yamashita, M., Higashi, T., Suetsugu, S., Sato, Y., Ikeda, T., Shirakawa, R., Kita, T., Takenawa, T., Horiuchi, H., Fukai, S., Nureki, O.
    • Journal Title

      Genes to Cells 12

      Pages: 1255-1265

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Crystal Structure of the MgtE Mg^<2+> transporter2007

    • Author(s)
      M. Hattori, Y. Tanaka, S. Fukai, R. Ishitani, O. Nureki
    • Journal Title

      Nature 448

      Pages: 1072-1075

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Journal Article] Crystallization and preliminary X-ray diffraction analysis of the full-length Mg^<2+> transporter2007

    • Author(s)
      M. Hattori, Y. Tanaka, S. Fukai, R. Ishitani, O. Nureki
    • Journal Title

      Acta Crystallographica F 63

      Pages: 682-684

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Journal Article] Crystallization and crystallographic analysis of yeast Sec2p, aguanine nucleotide-exchange factor for the yeast Rab GTPase Sec4p2007

    • Author(s)
      Sato, Y., Fukai, S., Nureki, O.
    • Journal Title

      Acta Crystallographica F 63

      Pages: 616-619

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Crystal structure of the Sec2p-Sec4p complex in the intermediate state of the nucleotide exchange reaction2007

    • Author(s)
      Sato, Y., Fukai, S., Ishitani, R., Nureki, O.
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A 104

      Pages: 8305-8310

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Crystal structure of human DAAMI formin homology 2 domain2007

    • Author(s)
      Yamashita, M., Higashi, T., Suetsugu, S., Sato, Y., Ikeda, T., Shirakawa, R., Kita, T., Takenawa, T., Horiuchi, H., Fukai, S., Nureki, O.
    • Journal Title

      Genes to Cells 12

      Pages: 1255-1265

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Crystal structure of the Sec2p-Sec4p complex in the intermediate state of the nucleotide exchange reaction2007

    • Author(s)
      Sato, Y., Fukai, S., Ishitani, R., Nureki, O.
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A 104

      Pages: 8305-8310

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Crystallization and preliminary X-ray diffraction analysis of the cytosolic domain of the Mg^<2+> transporter MgtE2007

    • Author(s)
      M. Hattori, Y. Tanaka, S. Fukai, R. Ishitani, O. Nureki
    • Journal Title

      Acta Crystallographica F 63

      Pages: 678-681

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Journal Article] Crystal structure of human DAAM1 formin homology 2 domain2007

    • Author(s)
      Yamashita, M., Higashi, T., Suetsugu, S., Sato, Y., Ikeda, T., Shirakawa, R., Kita, T., Takenawa, T., Horiuchi, H., Fukai, S., Nureki, O
    • Journal Title

      Genes to Cells 12巻

      Pages: 1255-1265

    • Data Source
      KAKENHI-PROJECT-19770078
  • [Journal Article] Asymmetric coiled-coil structure with guanine nucleotide exchange activity2006

    • Author(s)
      Y.Sato, R.Shirakawa, H.Horiuchi, N.Dohmae, S.Fukai, O.Nureki
    • Journal Title

      Structure 15

      Pages: 245-252

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus2006

    • Author(s)
      T.Tsukazaki, H.Mori, S.Fukai, T.Numata, A.Perederina, H.Adachi, H.Matsumura, K.Takano, S.Murakami, T.Inoue, Y.Mori, T.Sasaki, D.G.Vassylyev, O.Nureki, K.Ito
    • Journal Title

      Acta Crystallographica F 62

      Pages: 376-380

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Structural basis of RNA-dependent recruitment of glutamine to the genetic code2006

    • Author(s)
      H.Oshikane, K.Sheppard, S.Fukai, Y.Nakamura, R.Ishitani, T.Numata, R.L.Sherrer, L.Feng, E.Schmitt, M.Panvert, S.Blanquet, Y.Mechulam, D.Soll, O.Nureki
    • Journal Title

      Science 3122

      Pages: 1950-1954

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Snapshots of tRNA sulphuration via an adenylated intermediate2006

    • Author(s)
      T.Numata, Y.Ikeuchi, S.Fukai, T.Suzuki, O.Nureki
    • Journal Title

      Nature 442

      Pages: 419-424

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Snapshots of tRNA sulphuration via an adenylated intermediate2006

    • Author(s)
      T.Numata, Y.Ikeuchi, S.Fukai, T.Suzuki, O.Nureki
    • Journal Title

      Nature 442

      Pages: 419-424

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] tructural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex2006

    • Author(s)
      T.Numata, S.Fukai, Y.Ikeuchi, T.Suzuki, O.Nureki
    • Journal Title

      Structure 14

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Crystal structures of leucyl/phenylalanyl-tRNA-protein transferase and its complex with an aminoacyl-tRNA analog2006

    • Author(s)
      K.Suto, Y.Shimizu, K.Watanabe, T.Ueda, S.Fukai, O.Nureki, K.Tomita
    • Journal Title

      EMBO Journal 25

      Pages: 5942-5950

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] tructural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex2006

    • Author(s)
      T.Numata, S.Fukai, Y.Ikeuchi, T.Suzuki, O.Nureki
    • Journal Title

      Structure 14

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus2006

    • Author(s)
      T.Tsukazaki, H.Mori, S.Fukai, T.Numata, A.Perederina, H.Adachi, H.Matsumura, K.Takano, S.Murakami, T.Inoue, Y.Mori, T.Sasaki, D.G.Vassylyev, O.Nureki, K.Ito
    • Journal Title

      Acta Crystallographica F 62

      Pages: 376-380

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Crystallization and preliminary X-ray analysis of the tRNA thiolation enzyme MnmA from Escherichia coli complexed with tRNA^(Glu)2006

    • Author(s)
      T.Numata, Y.Ikeuchi, S.Fukai, H.Adachi, H.Matsumura, K.Takano, S.Murakami, T.Inoue, Y.Mori, T.Sasaki, T.Suzuki, O.Nureki
    • Journal Title

      Acta Crystallographica F 62

      Pages: 368-371

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Structural basis of RNA-dependent recruitment of glutamine to the genetic code2006

    • Author(s)
      H.Oshikane, K.Sheppard, S.Fukai, Y.Nakamura, R.Ishitani, T.Numata, R.L.Sherrer, L.Feng, E.Schmitt, M.Panvert, S.Blanquet, Y.Mechulam, D.Soll, O.Nureki
    • Journal Title

      Science 3122

      Pages: 1950-1954

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Complete crystallographic analysis of the dynamics of CCA-addition2006

    • Author(s)
      K.Tomita, R.Ishitani, S.Fukai, O.Nureki
    • Journal Title

      Nature 443

      Pages: 956-960

    • NAID

      130006997728

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Asymmetric coiled-coil structure with guanine nucleotide exchange activity2006

    • Author(s)
      Y.Sato, R.Shirakawa, H.Horiuchi, N.Dohmae, S.Fukai, O.Nureki
    • Journal Title

      Structure 15

      Pages: 245-252

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Complete crystallographic analysis of the dynamics of CCA-addition2006

    • Author(s)
      K.Tomita, R.Ishitani, S.Fukai, O.Nureki
    • Journal Title

      Nature 443

      Pages: 956-960

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Asymmetric coiled-coil structure with guanine nucleotide exchange activity2006

    • Author(s)
      Y.Sato, R.Shirakawa, H.Horiuchi, N.Dohmae, S.Fukai, O.Nureki
    • Journal Title

      Structure 15

      Pages: 245-252

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus2006

    • Author(s)
      T.Tsukazaki, H.Mori, S.Fukai, T.Numata, A.Perederina, H.Adachi, H.Matsumura, K.Takano, S.Murakami, T.Inoue, Y.Mori, T.Sasaki, D.G.Vassylyev, O.Nureki, K.Ito
    • Journal Title

      Acta Crystallographica F 62

      Pages: 376-380

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Crystallization and preliminary X-ray analysis of the tRNA thiolation enzyme MnmA from Escherichia coli complexed with tRNA^<Glu>2006

    • Author(s)
      T.Numata, Y.Ikeuchi, S.Fukai, H.Adachi, H.Matsumura, K.Takano, S.Murakami, T.Inoue, Y.Mori, T.Sasaki, T.Suzuki, O.Nureki
    • Journal Title

      Acta Crystallographica F 62

      Pages: 368-371

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Crystal structures of leucyl/phenylalanyl-tRNA-protein transferase and its complex with an aminoacyl-tRNA analog2006

    • Author(s)
      K.Suto, Y.Shimizu, K.Watanabe, T.Ueda, S.Fukai, O.Nureki, K.Tomita
    • Journal Title

      EMBO Journal 25

      Pages: 5942-5950

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] tructural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex2006

    • Author(s)
      T.Numata, S.Fukai, Y.Ikeuchi, T.Suzuki, O.Nureki
    • Journal Title

      Structure 14

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Structural basis of RNA-dependent recruitment of glutamine to the genetic code2006

    • Author(s)
      H.Oshikane, K.Sheppard, S.Fukai, Y.Nakamura, R.Ishitani, T.Numata, R.L.Sherrer, L.Feng, E.Schmitt, M.Panvert, S.Blanquet, Y.Mechulam, D.Soll, O.Nureki
    • Journal Title

      Science 3122

      Pages: 1950-1954

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Crystallization and preliminary X-ray analysis of the tRNA thiolation enzyme MnmA from Escherichia coli complexed with tRNA^<Glu>2006

    • Author(s)
      T.Numata, Y.Ikeuchi, S.Fukai, H.Adachi, H.Matsumura, K.Takano, S.Murakami, T.Inoue, Y.Mori, T.Sasaki, T.Suzuki, O.Nureki
    • Journal Title

      Acta Crystallographica F 62

      Pages: 368-371

    • Data Source
      KAKENHI-PROJECT-18054009
  • [Journal Article] Crystal structures of leucyl/phenylalanyl-tRNA-protein transferase and its complex with an aminoacyl-tRNA analog2006

    • Author(s)
      K.Suto, Y.Shimizu, K.Watanabe, T.Ueda, S.Fukai, O.Nureki, K.Tomita
    • Journal Title

      EMBO Journal 25

      Pages: 5942-5950

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Snapshots of tRNA sulphuration via an adenylated intermediate2006

    • Author(s)
      T.Numata, Y.Ikeuchi, S.Fukai, T.Suzuki, O.Nureki
    • Journal Title

      Nature 442

      Pages: 419-424

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Complete crystallographic analysis of the dynamics of CCA-addition2006

    • Author(s)
      K.Tomita, R.Ishitani, S.Fukai, O.Nureki
    • Journal Title

      Nature 443

      Pages: 956-960

    • NAID

      130006997728

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family2005

    • Author(s)
      Watanabe, K., Nureki, O., Fukai, S., Ishii, R., Okamoto, H., Yokoyama, S., Endo, Y., Hori, H.
    • Journal Title

      Journal of Biological Chemistry 280

      Pages: 10368-10377

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family2005

    • Author(s)
      Watanabe, K., Nureki, O., Fukai, S., Ishii, R., Okamoto, H., Yokoyama S., Endo Y., Hori H.
    • Journal Title

      Journal of Biological Chemistry 280

      Pages: 10368-10377

    • Data Source
      KAKENHI-PROJECT-16044214
  • [Journal Article] Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family2005

    • Author(s)
      Watanabe, K., Nureki, O., Fukai, S., Ishii, R., Okamoto, H., Yokoyama, S., Endo, Y., Hori, H.
    • Journal Title

      Journal of Biological Chemistry 280

      Pages: 10368-10377

    • Data Source
      KAKENHI-PROJECT-16770093
  • [Journal Article] Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family2005

    • Author(s)
      Watanabe, K., Nureki, O., Fukai, S., Ishii, R., Okamoto, H., Yokoyama, S., Endo, Y., Hori, H.
    • Journal Title

      Journal of Biological Chemistry 280

      Pages: 10368-10377

    • Data Source
      KAKENHI-PROJECT-17053007
  • [Journal Article] Structural basis for sulfur relay to RNA mediated by heterohexametric TusBCD complex2005

    • Author(s)
      Numata, T., Fukai, S., Ikeuchi, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Structure 4

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-16044214
  • [Journal Article] Structural basis for lysidine formation by ATP pyrophosphatase accompanied with a lysine-specific loop and a tRNA-recognition domain.2005

    • Author(s)
      Nakanishi, K., Fukai, S., Ikeuchi, Y., Soma, A., Sekine, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Proceedings of National Academy of Science U.S.A. 21

      Pages: 7487-7492

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Structural basis for anticodon recognition by methionyl-tRNA synthetase.2005

    • Author(s)
      Nakanishi, K., Ogiso, Y., Fukai, S., Nureki, O.
    • Journal Title

      Nature Structural and Molecular Biology 12

      Pages: 931-932

    • Data Source
      KAKENHI-PROJECT-17053007
  • [Journal Article] Structural basis for lysidine formation by ATP pyrophosphatase accompanied with a lysine-specific loop and a tRNA-recognition domain.2005

    • Author(s)
      Nakanishi, K., Fukai, S., Ikeuchi, Y., Soma, A., Sekine, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Proceeding of National Academy of Science U.S.A. 21

      Pages: 7487-7492

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex.2005

    • Author(s)
      Numata, T., Fukai, S., Ikeuchi, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Structure 4

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-17053007
  • [Journal Article] Structural basis for anticodon recognition by methionyl-tRNA synthetase.2005

    • Author(s)
      Nakanishi, K., Ogiso, Y., Fukai, S., Nureki, O.
    • Journal Title

      Nature Structural and Molecular Biology 12

      Pages: 931-932

    • Data Source
      KAKENHI-PROJECT-16770093
  • [Journal Article] Roles of conserved amino acid sequence motifs in the SpoU(TrmH) RNA methyltransferase family2005

    • Author(s)
      Watanabe, K., Nureki, O., Fukai, S., Ishii, R., Okamoto, H., Yokoyama, S., Endo, Y., Hori, H.
    • Journal Title

      Journal of Biological Chemistry 280

      Pages: 10368-10377

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Structural basis for anticodon recognition by methionyl-tRNA synthetase.2005

    • Author(s)
      Nakanishi, K., Ogiso, Y., Fukai, S., Nureki, O.
    • Journal Title

      Nature Structural and Molecular Biology 12

      Pages: 931-932

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex.2005

    • Author(s)
      Numata, T., Fukai, S., Ikeuchi, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Structure 4

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex.2005

    • Author(s)
      Numata, T., Fukai, S., Ikeuchi, Y, Suzuki, T., Nureki, O.
    • Journal Title

      Structure 4

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-17048007
  • [Journal Article] Structural basis for lysidine formation by ATP pyrophosphatase accompanied with a lysine-specific loop and a tRNA-recognition domain.2005

    • Author(s)
      Nakanishi, K., Fukai, S., Ikeuchi, Y, Soma, A., Sekine, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Proceedings of National Academy of Science U.S.A. 21

      Pages: 7487-7492

    • Data Source
      KAKENHI-PROJECT-17053007
  • [Journal Article] Structural basis for anticodon recognition by methionyl-tRNA synthetase2005

    • Author(s)
      Nakanishi, K., Ogiso, Y., Fukai, S., Nureki, O.
    • Journal Title

      Nature Structural and Molecular Biology 12

      Pages: 931-932

    • Data Source
      KAKENHI-PROJECT-16044214
  • [Journal Article] Structural basis for anticodon recognition by methionyl-tRNA synthetas.2005

    • Author(s)
      Nakanishi, K., Ogiso, Y., Fukai, S., Nureki, O.
    • Journal Title

      Nature Structural and Molecular Biology 12

      Pages: 931-932

    • Data Source
      KAKENHI-PROJECT-17028014
  • [Journal Article] Structural basis for lysidine formation by ATP pyrophosphatase accompanied with a lysine-specific loop and a tRNA-recognition domain.2005

    • Author(s)
      Nakanishi, K., Fukai, S., Ikeuchi, Y., Soma, A., Sekine, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Proceedings of the National Academy of Sciences of the U.S.A. 21

      Pages: 7487-7492

    • Data Source
      KAKENHI-PROJECT-16044214
  • [Journal Article] Structural basis for relay to RNA mediated by hetrohexameric TusBCD complex.2005

    • Author(s)
      Numata, T., Fukai, S., Ikeuchi, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Structure 4

      Pages: 357-366

    • Data Source
      KAKENHI-PROJECT-16770093
  • [Journal Article] Structural basis for lysidine formation by ATP pyrophsphatase accompanied with a lysine-specific loop and a tRNA-recognition domain.2005

    • Author(s)
      Nakanishi, K., Fukai, S., Ikeuchi, Y., Soma, A., Sekine, Y., Suzuki, T., Nureki, O.
    • Journal Title

      Proceedings of National Academy of Science U.S.A. 21

      Pages: 7487-7492

    • Data Source
      KAKENHI-PROJECT-16770093
  • [Presentation] シナプスオーガナイザーの選択的相互作用の構造基盤2019

    • Author(s)
      深井 周也
    • Organizer
      第19回日本蛋白質科学会年会 第71回日本細胞生物学会大会 合同年次大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-18H03983
  • [Presentation] Structural insights into transsynaptic molecular interactions for synapse formation and function2019

    • Author(s)
      深井 周也
    • Organizer
      The 5th Symposium of Neuroscience Network in Kobe
    • Invited
    • Data Source
      KAKENHI-PROJECT-18H03983
  • [Presentation] ユビキチンリガーゼRNF168によるK63結合型ユビキチン鎖の認識メカニズム2018

    • Author(s)
      深井 周也
    • Organizer
      第41回日本分子生物学会年会
    • Invited
    • Data Source
      KAKENHI-PLANNED-18H05501
  • [Presentation] ユビキチン鎖による炎症シグナル制御の構造基盤2014

    • Author(s)
      深井 周也
    • Organizer
      第87回日本生化学会大会
    • Place of Presentation
      国立京都国際会館
    • Year and Date
      2014-10-15
    • Invited
    • Data Source
      KAKENHI-PROJECT-24247014
  • [Presentation] マルチサブユニット繋留因子複合体の全体構造決定へのアプローチ2014

    • Author(s)
      深井 周也
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-11-27
    • Invited
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] 中程度の分解能での結晶構造解析2014

    • Author(s)
      深井 周也
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      ワークピア横浜
    • Year and Date
      2014-06-27
    • Invited
    • Data Source
      KAKENHI-PROJECT-24247014
  • [Presentation] ユビキチン鎖による炎症シグナル制御の構造基盤2014

    • Author(s)
      深井 周也
    • Organizer
      第87回日本生化学会大会
    • Place of Presentation
      国立京都国際会館
    • Year and Date
      2014-10-15
    • Invited
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] 中程度の分解能での結晶構造解析2014

    • Author(s)
      深井 周也
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      ワークピア横浜
    • Year and Date
      2014-06-27
    • Invited
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] Structural basis for selective cleavage of M1- and K63-linked polyubiquitin chains by a CYLD deubiquitinase2013

    • Author(s)
      Shuya Fukai, Yusuke Sato
    • Organizer
      Cold Spring Harbor Laboratory 2013 meeting - The Ubiquitin Family
    • Place of Presentation
      Cold Spring Harbor Laboratory, 米国
    • Invited
    • Data Source
      KAKENHI-PROJECT-24247014
  • [Presentation] Structural basis for selective cleavage of M1- and K63-linked polyubiquitin chains by a CYLD deubiquitinase2013

    • Author(s)
      Shuya Fukai, Yusuke Sato
    • Organizer
      Cold Spring Harbor Laboratory 2013 meeting - The Ubiquitin Family
    • Place of Presentation
      Cold Spring Harbor Laboratory, 米国
    • Invited
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] Structural basis for recognition of ubiquitin by UMI domain of RNF1682013

    • Author(s)
      Yusuke Sato, Aya Toma, Shuya Fukai
    • Organizer
      Cold Spring Harbor Laboratory 2013 meeting - The Ubiquitin Family
    • Place of Presentation
      Cold Spring Harbor Laboratory, 米国
    • Data Source
      KAKENHI-PROJECT-24247014
  • [Presentation] Structural basis for recognition of ubiquitin by UMI domain of RNF1682013

    • Author(s)
      Yusuke Sato, Aya Toma, Shuya Fukai
    • Organizer
      Cold Spring Harbor Laboratory 2013 meeting - The Ubiquitin Family
    • Place of Presentation
      Cold Spring Harbor Laboratory, 米国
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] 構造生物学からのコメント2013

    • Author(s)
      深井周也
    • Organizer
      第 51 回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館 (京都府京都市)
    • Data Source
      KAKENHI-ORGANIZER-22121001
  • [Presentation] Get3による翻訳後膜埋め込み機構の構造学的基盤2012

    • Author(s)
      山形敦史,窪田恵子,後藤(伊藤)桜子,佐藤裕介,深井周也
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2012-12-11
    • Invited
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] Structural basis of ubiquitin chain recognition by NZF domains for NF-κB activation2011

    • Author(s)
      深井周也
    • Organizer
      TNF2011(第13回国際TNF会議)
    • Place of Presentation
      淡路夢舞台国際会議場(兵庫県淡路市)(招待講演)
    • Year and Date
      2011-05-18
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] Structural basis of ubiquitin chain recognition by NZF domains for NF-κB activation2011

    • Author(s)
      深井周也
    • Organizer
      TNF2011(第13回国際TNF会議)
    • Place of Presentation
      淡路夢舞台国際会議場(兵庫県淡路市)(招待講演)
    • Year and Date
      2011-05-18
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] 構造解析のためのユビキチン鎖の大量合成2011

    • Author(s)
      深井周也
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク
    • Year and Date
      2011-06-09
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] Structural basis of ubiquitinchain recognition by NZF domains for NF-κB activation2011

    • Author(s)
      深井周也
    • Organizer
      TNF2011
    • Place of Presentation
      淡路夢舞台国際会議場
    • Year and Date
      2011-05-18
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] 構造解析のためのユビキチン鎖の大量合成2011

    • Author(s)
      深井周也
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク(大阪府吹田市)(招待講演)
    • Year and Date
      2011-06-09
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] 構造解析のためのユビキチン鎖の大量合成2011

    • Author(s)
      深井周也
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク(大阪府吹田市)(招待講演)
    • Year and Date
      2011-06-09
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] Mechanisms for recognition of K63-linked polyubiquitin chains2010

    • Author(s)
      深井周也
    • Organizer
      Pacifichem2010
    • Place of Presentation
      大阪大学コンベンションセンター(吹田キャンパス)
    • Year and Date
      2010-12-19
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] Znフィンガーによるユビキチン鎖識別のメカニズム2010

    • Author(s)
      深井周也
    • Organizer
      平成22年度日本結晶学会年会
    • Place of Presentation
      大阪大学
    • Year and Date
      2010-12-05
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] Znフィンガーによるユビキチン鎖識別のメカニズム2010

    • Author(s)
      深井周也
    • Organizer
      平成22年度日本結晶学会年会
    • Place of Presentation
      大阪大学コンベンションセンター(吹田キャンパス)
    • Year and Date
      2010-12-05
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] 繋留複合体による膜融合制御の構造基盤2010

    • Author(s)
      深井周也
    • Organizer
      BMB2010
    • Place of Presentation
      神戸ポートピアランド
    • Year and Date
      2010-12-10
    • Data Source
      KAKENHI-PLANNED-22121003
  • [Presentation] Znフィンガーによるユビキチン鎖識別のメカニズム2010

    • Author(s)
      深井周也
    • Organizer
      平成22年度日本結晶学会年会
    • Place of Presentation
      大阪大学コンベンションセンター(吹田キャンパス)
    • Year and Date
      2010-12-05
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] Mechanisms for recognition of K63-linked polyubiquitin chains2010

    • Author(s)
      深井周也
    • Organizer
      Pacifichem2010
    • Place of Presentation
      大阪大学コンベンションセンター(吹田キャンパス)
    • Year and Date
      2010-12-19
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] 繋留複合体による膜融合制御の構造基盤2010

    • Author(s)
      深井周也
    • Organizer
      BMB2010
    • Place of Presentation
      神戸ポートピアランド
    • Year and Date
      2010-12-10
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] ユビキチン化シグナルを読み解くユビキチン受容体の構造生物学2010

    • Author(s)
      深井周也
    • Organizer
      文部科学省科研費特定領域研究「タンパク質分解」公開シンポジウム
    • Place of Presentation
      東京ガーデンパレス
    • Year and Date
      2010-08-21
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] 構造細胞生物学の新展開2010

    • Author(s)
      千田俊哉, 深井周也
    • Organizer
      BMB2010
    • Place of Presentation
      神戸市
    • Year and Date
      2010-12-10
    • Data Source
      KAKENHI-ORGANIZER-22121001
  • [Presentation] Mechanisms for recognitionof K63-linked polyubiquitin chains2010

    • Author(s)
      深井周也
    • Organizer
      Pacifichem2010
    • Place of Presentation
      ハワイコンベンションセンター
    • Year and Date
      2010-12-19
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] Lys63結合型ポリユビキチン鎖認識のメカニズム2009

    • Author(s)
      深井周也
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-10
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] 低分子量GTPaseによる開口放出制御の構造基盤2009

    • Author(s)
      深井周也
    • Organizer
      第9回日本蛋白質科学会年会
    • Place of Presentation
      熊本全日空ホテルニュースカイ
    • Year and Date
      2009-05-22
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Presentation] 低分子量GTPaseによる開口放出制御の構造基盤2009

    • Author(s)
      深井周也
    • Organizer
      第9回日本蛋白質科学会年会
    • Place of Presentation
      熊本全日空ホテルニュースカイ
    • Year and Date
      2009-05-22
    • Data Source
      KAKENHI-PROJECT-21687009
  • [Presentation] Lys63結合型ポリユビキチン鎖認識のメカニズム2009

    • Author(s)
      深井周也
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-10
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Presentation] Structural basis of selective cleavage of Lys63-linked polyubiquitin chains by JAMM ubiauitin isonentidase2008

    • Author(s)
      深井周也
    • Organizer
      FASEB Summer Research Conferences Ubiquitin and Cellular Regulation
    • Place of Presentation
      Saxton's River, Vermont, USA
    • Year and Date
      2008-06-13
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Presentation] Structural basis of selective cleavage of Lys63-linked polyubiquitin chains by JAMM ubiquitin isopeptidase2008

    • Author(s)
      深井 周也
    • Organizer
      FASEB Summer Research Conferences -Ubiquitin and Cellular Regulation-
    • Place of Presentation
      Saxton's River, Vermont, USA
    • Year and Date
      2008-06-16
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Presentation] Structural basis of selective cleavage of Lys63-linked polyubiquitin chains by JAMM ubiquitin isopeptidase2008

    • Author(s)
      深井周也
    • Organizer
      FASEB Summer Research Conferences Ubiquitin and Cellular Reaulation
    • Place of Presentation
      Saxton' s River, Vermont, USA
    • Year and Date
      2008-06-16
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Presentation] AMSHファミリーによるK63結合型ポリユビキチン鎖特異的な切断活性機構の構造的甚繋2008

    • Author(s)
      左藤裕介(深井周也)
    • Organizer
      BMB2008
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-12
    • Data Source
      KAKENHI-PROJECT-20051008
  • [Presentation] AMSHファミリーによるK63結合型ポリユビキチン鎖特異的な切断活性機構の構造的基盤2008

    • Author(s)
      佐藤裕介(深井周也)
    • Organizer
      BMB2008
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-12
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Presentation] Structural basis of selective cleavage of Lys63-linked polyubiquitin chains by JAMM ubiquitin isopeptidase2008

    • Author(s)
      深井周也
    • Organizer
      FASEB Summer Research Conferences Ubiquitin and Cellular Regulation
    • Place of Presentation
      Saxton's River, Vermont, USA
    • Year and Date
      2008-06-16
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Presentation] Crystal Structure of the MgtE Mg^<2+> transporter2007

    • Author(s)
      服部素之(発表者)、田中良樹、深井周也、石谷隆一郎、濡木理
    • Organizer
      第八回アジア結晶学会年会(AsCA'07)
    • Place of Presentation
      Howard International House Taipei
    • Data Source
      KAKENHI-PROJECT-19036005
  • [Presentation] 開口放出を制御するRabGTPase Sec4p活性化の構造的基盤2007

    • Author(s)
      深井 周也
    • Organizer
      BMB2007
    • Place of Presentation
      パシフィコ横浜
    • Data Source
      KAKENHI-PROJECT-18054009
  • [Presentation] 開口放出を制御するRabGTPase Sec4p活性化の構造的基盤2007

    • Author(s)
      深井周也
    • Organizer
      BMB2007
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2007-12-13
    • Data Source
      KAKENHI-PROJECT-19770078
  • [Presentation] マグネシウム輸送体MgtEのX線結晶構造解析2007

    • Author(s)
      服部素之(発表者)、田中良樹、深井周也、石谷隆一郎、濡木理
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      パシフィコ横浜
    • Data Source
      KAKENHI-PROJECT-19036005
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    # of Collaborated Projects: 3 results
    # of Collaborated Products: 26 results
  • 2.  濡木 理 (10272460)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 25 results
  • 3.  三村 久敏 (30463904)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 5 results
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    # of Collaborated Products: 0 results
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    # of Collaborated Products: 1 results
  • 8.  SENDA Toshiya (30272868)
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    # of Collaborated Products: 1 results
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    # of Collaborated Products: 0 results
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    # of Collaborated Products: 1 results
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    # of Collaborated Projects: 1 results
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  • 12.  KAINOSHO Masatsune (20137029)
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    # of Collaborated Products: 0 results
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    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
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    # of Collaborated Projects: 1 results
    # of Collaborated Products: 3 results
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    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
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    # of Collaborated Products: 0 results
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    # of Collaborated Projects: 1 results
    # of Collaborated Products: 20 results
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    # of Collaborated Products: 0 results
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    # of Collaborated Projects: 1 results
    # of Collaborated Products: 4 results
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    # of Collaborated Products: 2 results
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    # of Collaborated Products: 0 results
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    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 23.  岩井 一宏 (60252459)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 24.  出水 庸介 (90389180)
    # of Collaborated Projects: 1 results
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    # of Collaborated Products: 4 results
  • 27.  TAKAHASHI Tomio Samuel
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    # of Collaborated Products: 2 results
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    # of Collaborated Products: 1 results
  • 29.  TAKAO Keizo
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    # of Collaborated Products: 1 results
  • 30.  UEMURA Takeshi
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    # of Collaborated Products: 2 results
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    # of Collaborated Products: 1 results
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    # of Collaborated Products: 2 results
  • 36.  NAKADA Shinichiro
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 37.  CHIKEN Satomi
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
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    # of Collaborated Products: 1 results
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    # of Collaborated Products: 1 results
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    # of Collaborated Products: 1 results
  • 42.  徳永 文稔
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    # of Collaborated Products: 3 results
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    # of Collaborated Products: 1 results
  • 44.  柴田 佑里
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    # of Collaborated Products: 1 results
  • 45.  及川 大輔
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    # of Collaborated Products: 1 results
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    # of Collaborated Products: 1 results
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    # of Collaborated Products: 2 results
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    # of Collaborated Products: 2 results
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    # of Collaborated Products: 1 results
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    # of Collaborated Projects: 0 results
    # of Collaborated Products: 6 results
  • 62.  鯉渕 智彦
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 2 results
  • 63.  重松 秀樹
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 64.  横井 紀彦
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 65.  窪田 恵子
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 2 results
  • 66.  伊藤 耕一
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 67.  伊藤 維昭
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 68.  森 博幸
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 69.  塚崎 智也
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 70.  土屋 光
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 71.  南部 篤
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 72.  伊藤 隆
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 73.  岡 敏彦
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 74.  入江 崇
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 75.  福士 雅也
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 76.  寺脇 正剛
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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