Katayama Kotoe 片山琴絵

Researcher Number	40581195
Other IDs
Affiliation (Current)	2025: 東京大学, 医科学研究所, 准教授
Affiliation (based on the past Project Information) *help	2021 – 2023: 東京大学, 医科学研究所, 准教授 2017 – 2020: 東京大学, 医科学研究所, 助教
Review Section/Research Field	Principal Investigator Basic Section 62010:Life, health and medical informatics-related Except Principal Investigator Medium-sized Section 56:Surgery related to the biological and sensory functions and related fields / Orthopaedic surgery / Complex systems
Keywords	Principal Investigator バイオインフォマティクス / 短鎖リード / 長鎖リード / 確率分布 / 接合分布関数 / シンボリックデータ / 単一細胞解析 / がん Except Principal Investigator がん / シークエンシング … More / モデル / クロナリティ / 骨軟部肉腫 / 整形外科 / ゲノム / 癌 / 融合遺伝子 / 骨軟部腫瘍 / がんゲノム / ゲノム解析 / 肉腫 / 人工知能 / バイオインフォマティクス / 統計的モデリング / システム生物学 Less

Development of multi omics data analysis method using short/long read integration and complete human reference sequencesPrincipal Investigator
- Principal Investigator
  
  片山琴絵
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  The University of Tokyo
時空間内包型数理的解析手法によるがん細胞のクロナリティの新たな理解
- Principal Investigator
  
  植村元秀
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 56:Surgery related to the biological and sensory functions and related fields
- Research Institution
  Fukushima Medical University
Proposal of a Spatio-Temporal Inclusionary Mathematical Analysis Method for Single Cells to Understand Tumor Tissue DiversityPrincipal Investigator
- Principal Investigator
  
  Katayama Kotoe
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  The University of Tokyo
Identification of diagnostic biomarker and novel fusion genes of bone and soft tissue sarcoma
- Principal Investigator
  
  Matsuda Koichi
- Project Period (FY)
  2016 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Orthopaedic surgery
- Research Institution
  The University of Tokyo
Neodimensional exploration for cancer systems by supercomputing and innovative information technology
- Principal Investigator
  
  MIYANO SATORU
- Project Period (FY)
  2015 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  The University of Tokyo

All 2023 2022 2021 2019 2018

All Journal Article

[Journal Article] KMT2C expression and DNA homologous recombination repair factors in lung cancers with a high-grade fetal adenocarcinoma component2023
- Author(s)
  Suzuki Masaki、Kasajima Rika、Yokose Tomoyuki、Shimizu Eigo、Hatakeyama Seira、Yamaguchi Kiyoshi、Yokoyama Kazuaki、Katayama Kotoe、Yamaguchi Rui、Furukawa Yoichi、Miyano Satoru、Imoto Seiya、Shinozaki-Ushiku Aya、Ushiku Tetsuo、Miyagi Yohei
- Journal Title
  
  Translational Lung Cancer Research
  
  Volume: 12 Issue: 8 Pages: 1738-1751
- DOI
  10.21037/tlcr-23-137
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23K11300
[Journal Article] Histological markers, sickle-shaped blood vessels, myxoid area, and infiltrating growth pattern help stratify the prognosis of patients with myxofibrosarcoma/undifferentiated sarcoma2023
- Author(s)
  Washimi Kota、Kasajima Rika、Shimizu Eigo、Sato Shinya、Okubo Yoichiro、Yoshioka Emi、Narimatsu Hiroto、Hiruma Toru、Katayama Kotoe、Yamaguchi Rui、Yamaguchi Kiyoshi、Furukawa Yoichi、Miyano Satoru、Imoto Seiya、Yokose Tomoyuki、Miyagi Yohei
- Journal Title
  
  Scientific Reports
  
  Volume: 13 Issue: 1
- DOI
  10.1038/s41598-023-34026-w
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K09422, KAKENHI-PROJECT-20K16210, KAKENHI-PROJECT-23K11300
[Journal Article] Early dynamics of circulating tumor DNA predict clinical response to immune checkpoint inhibitors in metastatic renal cell carcinoma2022
- Author(s)
  Koh Yoko、Nakano Kosuke、Katayama Kotoe、Yamamichi Gaku、Yumiba Satoru、Tomiyama Eisuke、Matsushita Makoto、Hayashi Yujiro、Yamamoto Yoshiyuki、Kato Taigo、Hatano Koji、Kawashima Atsunari、Ujike Takeshi、Imamura Ryoichi、Yamaguchi Rui、Imoto Seiya、Shiotsu Yukimasa、Nonomura Norio、Uemura Motohide
- Journal Title
  
  International Journal of Urology
  
  Volume: 2 Issue: 5 Pages: 462-469
- DOI
  10.1111/iju.14816
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K09728, KAKENHI-PROJECT-19K12215
[Journal Article] Perioperative circulating tumor DNA enables the identification of patients with poor prognosis in upper tract urothelial carcinoma2022
- Author(s)
  Nakano K, Koh Y, Yamamichi G, Yumiba S, Tomiyama E, Matsushita M, Hayashi Y, Wang C, Ishizuya Y, Yamamoto Y, Kato T, Hatano K, Kawashima A, Ujike T, Fujita K, Kiyotani K, Katayama K, Yamaguchi R, Imoto S, Imamura R, Nonomura N, Uemura M
- Journal Title
  
  Cancer Science
  
  Volume: - Issue: 5 Pages: 1830-1842
- DOI
  10.1111/cas.15334
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19K12215, KAKENHI-PROJECT-19H03522
[Journal Article] COVID-19 risk assessment at the opening ceremony of the Tokyo 2020 Olympic Games2021
- Author(s)
  Murakami Michio、Miura Fuminari、Kitajima Masaaki、Fujii Kenkichi、Yasutaka Tetsuo、Iwasaki Yuichi、Ono Kyoko、Shimazu Yuzo、Sorano Sumire、Okuda Tomoaki、Ozaki Akihiko、Katayama Kotoe、Nishikawa Yoshitaka、Kobashi Yurie、Sawano Toyoaki、Abe Toshiki、Saito Masaya M.、Tsubokura Masaharu、Naito Wataru、Imoto Seiya
- Journal Title
  
  Microbial Risk Analysis
  
  Volume: - Pages: 100162-100162
- DOI
  10.1016/j.mran.2021.100162
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K12215, KAKENHI-PROJECT-22KJ2358
[Journal Article] Massively parallel sequencing of tenosynovial giant cell tumors reveals novel CSF1 fusion transcripts and novel somatic CBL mutations2019
- Author(s)
  Tsuda Yusuke、Matsubara Daisuke (5th) etc
- Journal Title
  
  International Journal of Cancer
  
  Volume: 145 Issue: 12 Pages: 3276-3284
- DOI
  10.1002/ijc.32421
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K07441, KAKENHI-PROJECT-19K12215, KAKENHI-PLANNED-15H05912, KAKENHI-PROJECT-16H02676, KAKENHI-PROJECT-17H03596, KAKENHI-PROJECT-18H02933, KAKENHI-PROJECT-19H03444, KAKENHI-PROJECT-16K08672, KAKENHI-PROJECT-18K15303
[Journal Article] Replication stress triggers microsatellite destabilization and hypermutation leading to clonal expansion in vitro2019
- Author(s)
  Matsuno Yusuke、Atsumi Yuko、Shimizu Atsuhiro、Katayama Kotoe、Fujimori Haruka、Hyodo Mai、Minakawa Yusuke、Nakatsu Yoshimichi、Kaneko Syuzo、Hamamoto Ryuji、Shimamura Teppei、Miyano Satoru、Tsuzuki Teruhisa、Hanaoka Fumio、Yoshioka Ken-ichi
- Journal Title
  
  Nature Communications
  
  Volume: 10 Issue: 1 Pages: 3925-3925
- DOI
  10.1038/s41467-019-11760-2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K11542, KAKENHI-PROJECT-19K12215, KAKENHI-PLANNED-15H05912, KAKENHI-PUBLICLY-18H04798, KAKENHI-PUBLICLY-18H04908, KAKENHI-PUBLICLY-19H05210, KAKENHI-PROJECT-19H03429
[Journal Article] Integrated exome and RNA sequencing of dedifferentiated liposarcoma2019
- Author(s)
  Hirata Makoto、Matsubara Daisuke (21th) etc
- Journal Title
  
  Nature Communications
  
  Volume: 10 Issue: 1 Pages: 1-12
- DOI
  10.1038/s41467-019-13286-z
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K07441, KAKENHI-PROJECT-19K07791, KAKENHI-PROJECT-19K09206, KAKENHI-PROJECT-19K12215, KAKENHI-PLANNED-15H05912, KAKENHI-PROJECT-16H02676, KAKENHI-PROJECT-17H03596, KAKENHI-PROJECT-18H02933, KAKENHI-PROJECT-19H03444, KAKENHI-PROJECT-16K08672
[Journal Article] Genomic Heterogeneity Within Individual Prostate Cancer Foci Impacts Predictive Biomarkers of Targeted Therapy2018
- Author(s)
  VanderWeele DJ, Finney R, Katayama K, Gillard M, Paner G, Imoto S, Yamaguchi R, Wheeler D, Lack J, Cam M, Pontier A, Nguyen YTM, Maejima K, Sasaki-Oku A, Nakano K, Tanaka H, Vander Griend D, Kubo M, Ratain MJ, Miyano S, Nakagawa H
- Journal Title
  
  Eur Urol Focus
  
  Volume: pii: S2405-4569(18) Issue: 3 Pages: 30007-5
- DOI
  10.1016/j.euf.2018.01.006
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-15H05912, KAKENHI-PROJECT-19K12215

1. 山口類 (90380675)

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2. 井元清哉 (10345027)

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3. MIYANO SATORU (50128104)

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4. Matsuda Koichi (90401257)

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Katayama Kotoe 片山 琴絵

Research Projects

Research Products

Co-Researchers

Development of multi omics data analysis method using short/long read integration and complete human reference sequencesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

時空間内包型数理的解析手法によるがん細胞のクロナリティの新たな理解

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Proposal of a Spatio-Temporal Inclusionary Mathematical Analysis Method for Single Cells to Understand Tumor Tissue DiversityPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Identification of diagnostic biomarker and novel fusion genes of bone and soft tissue sarcoma

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Neodimensional exploration for cancer systems by supercomputing and innovative information technology

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] KMT2C expression and DNA homologous recombination repair factors in lung cancers with a high-grade fetal adenocarcinoma component2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Histological markers, sickle-shaped blood vessels, myxoid area, and infiltrating growth pattern help stratify the prognosis of patients with myxofibrosarcoma/undifferentiated sarcoma2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Early dynamics of circulating tumor DNA predict clinical response to immune checkpoint inhibitors in metastatic renal cell carcinoma2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Perioperative circulating tumor DNA enables the identification of patients with poor prognosis in upper tract urothelial carcinoma2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] COVID-19 risk assessment at the opening ceremony of the Tokyo 2020 Olympic Games2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Massively parallel sequencing of tenosynovial giant cell tumors reveals novel CSF1 fusion transcripts and novel somatic CBL mutations2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Replication stress triggers microsatellite destabilization and hypermutation leading to clonal expansion in vitro2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Integrated exome and RNA sequencing of dedifferentiated liposarcoma2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Genomic Heterogeneity Within Individual Prostate Cancer Foci Impacts Predictive Biomarkers of Targeted Therapy2018

Author(s)

Journal Title

DOI

Data Source

Katayama Kotoe 片山琴絵