TOYODA Atsushi 豊田敦

… Alternative Names

豊田敦トヨダアツシ

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Researcher Number	10267495
Other IDs
Affiliation (Current)	2025: 国立遺伝学研究所, ゲノム・進化研究系, 特任教授
Affiliation (based on the past Project Information) *help	2018 – 2024: 国立遺伝学研究所, ゲノム・進化研究系, 特任教授 2016 – 2018: 国立遺伝学研究所, 生命情報研究センター, 特任教授 2017: 国立遺伝学研究所, 教授 2017: 国立遺伝学研究所, 生命情報研究センター, 特任准教授 2016: 国立遺伝学研究所, 大学共同利用機関等の部局等, 特任教授 … More 2014 – 2016: 国立遺伝学研究所, 大学共同利用機関等の部局等, その他 2011 – 2015: 国立遺伝学研究所, 生命情報研究センター, 特任准教授 2013 – 2014: 国立遺伝学研究所, 特任准教授 2009 – 2014: National Institute of Genetics, 生物遺伝資源情報総合センター, 特任准教授 2013: 国立遺伝学研究所, 大学共同利用機関等の部局等, 特任准教授 2012: 国立遺伝学研究所, 大学共同利用機関等の部局等, その他 2010 – 2011: 国立遺伝学研究所, 比較ゲノム解析研究室, 特任准教授 2010: 国立遺伝学研究所, 特任准教授 2008 – 2009: 情報・システム研究機構・国立遺伝学研究所, 特任准教授 2006 – 2007: 理化学研究所, シーケンス技術チーム, 上級研究員 2002: 理化学研究所, ゲノム塩基配列解析研究チーム, 上級研究員 2000 – 2001: 理化学研究所, ゲノム塩基配列解析研究チーム, 研究員 Less
Review Section/Research Field	Principal Investigator Biological Sciences / 基礎ゲノム科学 / Biological Sciences Except Principal Investigator Biological Sciences / Basic Section 59040:Nutrition science and health science-related / Genome biology / Pediatrics / Biological Sciences / Applied genomics / Basic Section 64040:Social-ecological systems-related … More / Educational psychology / Applied biochemistry / Food Cycle Research / Aquatic bioproduction science / Laboratory animal science / Genome biology Less
Keywords	Principal Investigator 第二世代シーケンサー / 次世代シーケンサー / 個人ゲノム / 脳疾患 / 次世代型シーケンサー / パーソナルゲノム / 多様性 / 隠れマルコフモデル / 保存領域 / 選択的スプライシング / シークエンシング / 新規遺伝子 / 比較ゲノム … More Except Principal Investigator … More ゲノム / メタゲノム / エピゲノム / エピジェネティクス / メタゲノム解析 / 遺伝子 / 南極 / 遺伝学 / ゲノム科学 / 比較ゲノム / 進化 / 腸内細菌叢 / 極地 / 北極 / 全ゲノム解析 / バイオインフォマティクス / レット症候群 / 自閉症 / 次世代シーケンサー / 双生児 / リシーケンシング / 次世代DNAシーケンサー / シーケンサー / 個人ゲノム / 極限環境 / ゲノム構造 / ゲノムライブラリ / ハイスループット解析 / 染色体 / ゲノム情報 / ダウン症 / 微生物資源 / 遺伝子配列予測 / 多様性 / 菌類 / スーパーコンピュータ / 空間的オミックス解析 / RNA解析 / ゲノム・メタゲノム / シングルセル解析 / オミックス解析 / ゲノムアノテーション / ゲノム多型 / ゲノムアッセンブル / スーパーコンピューター / 1細胞解析 / RNA-Seq / 新規ゲノム配列決定 / 代謝 / 加齢性骨格筋減少 / 腸内細菌 / 運動機能 / エンテロタイプ / サルコペニア / 機能メタゲノム / 骨格筋減少症 / 高齢者 / 身体能力 / 栄養 / 腸内フローラ / 栄養摂取 / 加齢性骨格筋減少症 / 機能メタゲノミクス解析 / 抗菌薬暴露 / 機能メタゲノム解析 / MAPLE / 乳幼児 / メンタルヘルス / 縦断コホート研究 / fMRI / 脳機能 / 成人期 / 児童期 / 脳・神経 / 教育系心理学 / 脳画像 / 学業達成 / 認知能力 / 発達 / 教育 / 社会性発達 / 認知発達 / 分子遺伝学 / 脳神経科学 / 行動遺伝学 / 遺伝と環境 / 双生児法 / 生理機能評価 / 有用二次代謝産物生産 / 代謝工学と代謝再構築 / 生合成系の分子進化 / 植物アルカロイド生合成系 / 共生 / 特殊環境 / 水平伝播 / 環境適応 / 低温 / 微生物 / コケ坊主 / アセンブラ / ゲノム解析 / ハプロタイプ / ゲノム構築 / 次世代シークエンサー / ゲノムアセンブル / ヘテロ接合性 / ゲノムアセンブラ / 新規変異 / 個体ゲノム / ゲノム変異 / ゲノム解析技術 / 遺伝子機能解析 / 1分子並列シーケンサー / ゲノム生物学 / 進化学 / 複合適応形質 / 生理代謝ポテンシャル / 機能ポテンシャル / 微生物生態系 / 微生物物質循環 / 森林土壌 / 農耕地土壌 / 生理代謝機能 / MAPLEシステム / 遺伝子破壊 / メダカ / CRISPR/Cas / CRISPR/Cas9 / ミオスタチン / トラフグ / マダイ / ゲノム編集 / てんかん / 遺伝子発現 / バルプロ酸ナトリウム / 遺伝子発現制御 / iPS細胞 / 治療薬 / リサーチバイオリソース / 疾患 / トランスクリプトーム / 脳 / 霊長類 / モデル動物 / バイオリソース / 精神発達 / 比較 / 双子 / 神経疾患 / 精神発達障害 / イギリス：ニュージーランド / 国際情報交流 / 環境耐性遺伝子 / 国際情報交換（イギリス：ニュージーランド） / クマムシ / 線虫 / 凍結耐性遺伝子 / 乾燥耐性遺伝子 / 国際情報交換（ニュージーランド、英国） / 緩歩動物 / 線形動物 / 凍結耐性 / 乾燥耐性 / 次世代DNAシーケンサ / インフォームドコンセント / GWAS / de novo配列決定 / ChIP-seq / RNA-seq / ゲノムインフォマティクス / インフォマティクス / 脳疾患 / メタグノム解析 / 遺伝子資源 / 微生物多様性 / 16S rRNA遺伝子 / 比較ゲノム解析 / Candidate division OP1 / アセチルCoAパスウェイ / Chloroflexi / 代謝パスウェイ / 地下生命圏 / メタゲノム情報解析 / ゲノム資源 / ゲノム進化 / ゲノム地図 / バイオテクノロジー / 配列決定 / ライブラリ / 次世代シークエンシング / マイクロアレイ / シークエンス / 21番染色体 / 塩基配列 / マウスゲノム / ヒトゲノム / 比較解析 Less

Elucidating the changes in fungal diversity in the Antarctic and Arctic regions and establishing polar-derived fungi as a genetic resource
- Principal Investigator
  
  辻雅晴
- Project Period (FY)
  2023 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 64040:Social-ecological systems-related
- Research Institution
  Asahikawa National College of Technology
Platform for Advanced Genome Science
- Principal Investigator
  
  黒川顕
- Project Period (FY)
  2022 – 2027
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (platforms for Advanced Technologies and Research Resources)
- Research Institution
  National Institute of Genetics
Role of gut microbiota function on pathophysiology of sarcopenia
- Principal Investigator
  
  Kuwahara Tomomi
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 59040:Nutrition science and health science-related
- Research Institution
  Kagawa University
Study for the reconstitution process of infant gut flora
- Principal Investigator
  
  Imaohji Haruyuki
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 59040:Nutrition science and health science-related
- Research Institution
  Kagawa University
Development of haplotype phased genome assembler
- Principal Investigator
  
  Itoh Takehiko
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Genome biology
- Research Institution
  Tokyo Institute of Technology
Platform for Advanced Genome Science
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2016 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources
- Research Institution
  National Institute of Genetics
Visualization of the metabolic and physiological potential of microbial community in farmland
- Principal Investigator
  
  TAKAMI Hideto
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Food Cycle Research
- Research Institution
  Japan Agency for Marine-Earth Science and Technology
Development of new aquaculture using designated nuclease
- Principal Investigator
  
  Kinoshita Masato
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Aquatic bioproduction science
- Research Institution
  Kyoto University
Characterization of molecular evolution of plant isoquinoline alkaloid biosynthesis and its application to metabolic engineering
- Principal Investigator
  
  Sato Fumihiko
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Applied biochemistry
- Research Institution
  Kyoto University
Integrated behavioral genetic study of educational processes.
- Principal Investigator
  
  Ando Juko
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Educational psychology
- Research Institution
  Keio University
Identification of genomic changes and their therapeutic effects in neuronally-differentiated induced pluripotent stem cells of autistic patients
- Principal Investigator
  
  KUBOTA Takeo
- Project Period (FY)
  2013 – 2014
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Pediatrics
- Research Institution
  University of Yamanashi
Development of the integrated technologies to analyze genomic bases of individuality
- Principal Investigator
  
  Fujiyama Asao
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Genome biology
- Research Institution
  National Institute of Genetics
Developmental transcriptome analysis of monkey brain for the establishment of human disease model
- Principal Investigator
  
  GO Yasuhiro
- Project Period (FY)
  2012 – 2013
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Laboratory animal science
- Research Institution
  Center for Novel Science Initatives, National Institutes of Natural Sciences
  Kyoto University
Genome analysis of biosphere of Moss-pillar in an east Antarctic lake
- Principal Investigator
  
  Baba Tomoya
- Project Period (FY)
  2012 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Applied genomics
- Research Institution
  National Institute of Genetics
  大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイエンス統合データベースセンター)
Survey of anti-desiccation and ant-freezing genes in Antarctic nematodes by comparative genome analysis
- Principal Investigator
  
  KAGOSHIMA Hiroshi
- Project Period (FY)
  2011 – 2013
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Genome biology
- Research Institution
  大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ
Comparison of genomic and epigenomicexpression in monozygotic twins using next-generation sequencing.
- Principal Investigator
  
  KUBOTA Takeo
- Project Period (FY)
  2011 – 2012
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Pediatrics
- Research Institution
  University of Yamanashi
elucidation of mechanisms of brain diseases based on personal genome information
- Principal Investigator
  
  TSUJI Shoji
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Study on Next-Generation Technologies for Personal Genome AnalysisPrincipal Investigator
- Principal Investigator
  
  TOYODA Atsushi
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2010 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Research Institution
  National Institute of Genetics
Genetic Bases for the Evolution of Complex Adaptive Traits
- Principal Investigator
  
  HASEBE MITSUYASU
- Project Period (FY)
  2010 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute for Basic Biology
The Study on Human Genome diversityPrincipal Investigator
- Principal Investigator
  
  TOYODA Atsushi
- Project Period (FY)
  2009 – 2011
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  National Institute of Genetics
Preparation method of environmental DNA sample for conservation of the genetic resource in the deep subsurface biosphere and analysis of biodiviersity harbored in the DNA
- Principal Investigator
  
  TAKAMI Hideto
- Project Period (FY)
  2008 – 2010
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Applied genomics
- Research Institution
  Japan Agency for Marine-Earth Science and Technology
Comparative Genomics Toward Understanding Genomic Bases of Evolution and Bio-Diversity : Support Groups
- Principal Investigator
  
  FUJIYAMA Asao
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Informatics
Highly Accurate Comparative Genome Mapping and Structural Genomics
- Principal Investigator
  
  FUJIYAMA Asao
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Informatics
比較ゲノム解析をベースとした機能領域探索法の開発Principal Investigator
- Principal Investigator
  
  豊田敦
- Project Period (FY)
  2002
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
ダウン症候群原因遺伝子の同定とその発症機構のゲノム科学的研究
- Principal Investigator
  
  服部正平
- Project Period (FY)
  2001
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
ダウン症候群原因遺伝子の同定とその発症機構のゲノム科学的研究
- Principal Investigator
  
  HATTORI Masahira
- Project Period (FY)
  2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (C)
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research

[Book] 細胞工学別冊　次世代シークエンサー　目的別アドバンストメソッド2012
- Author(s)
  豊田敦
- Publisher
  秀潤社
- Data Source
  KAKENHI-PLANNED-22129003
[Book] 次世代シークエンサーによるゲノム解読と今後の動向、実験医学増刊「疾患遺伝子の探索と超高速シークエンス-パーソナルゲノム時代の疾患解明と治療戦略2009
- Author(s)
  豊田敦、藤山秋佐夫
- Data Source
  KAKENHI-PROJECT-17018031
[Book] 蛋白質核酸酵素(ゲノム再配列決定をいかに行うか<特集次世代高速シ^クエンサーの応用と情報解析>, 54)2009
- Author(s)
 豊田敦、藤山秋佐夫
- Data Source
 KAKENHI-PROJECT-17018030
[Book] ゲノム再配列決定をいかに行なうか〈特集次世代高速シークエンサーの応用と情報解析〉2009
- Author(s)
  豊田敦、藤山秋佐夫
- Data Source
  KAKENHI-PROJECT-17018031
[Book] 実験医学(辻省次編, 次世代シークエンサーによるゲノム解読と今後の動向、実験医学増刊「疾患遺伝子の探索と超高速シークエンス-パーソナルゲノム時代の疾患解明と治療戦略, 27)2009
- Author(s)
  豊田敦、藤山秋佐夫
- Data Source
  KAKENHI-PROJECT-17018030
[Book] 細胞工学別冊(監修藤山秋佐夫, ヒトと霊長類の比較ゲノム:近縁種との比較から見るヒトゲノムの特徴、比較ゲノム学から読み解く生命システム)2007
- Author(s)
  黒木陽子, 野口英樹, 豊田敦, 藤山秋佐夫
- Publisher
  秀潤社
- Data Source
  KAKENHI-PROJECT-17018030
[Book] ヒトと霊長類の比較ゲノム:近縁種との比較から見るヒトゲノムの特徴、(2007)細胞工学別冊(比較ゲノム学から読み解く生命システム、監修藤山秋佐夫)2007
- Author(s)
  黒木陽子、野口英樹、豊田敦、藤山秋佐夫
- Publisher
  秀潤社
- Data Source
  KAKENHI-PROJECT-17018031
[Book] ヒトとチンパンジーの比較ゲノム(ヒトゲノム配列決定の内容と意義)2005
- Author(s)
  黒木陽子、野口英樹、豊田敦、藤山秋佐夫
- Data Source
  KAKENHI-PROJECT-17018031
[Book] 細胞工学(ヒトと霊長類の比較ゲノム:近縁種との比較から見るヒトゲノムの特徴, 24)2005
- Author(s)
  黒木陽子, 野口英樹, 豊田敦, 藤山秋佐夫
- Data Source
  KAKENHI-PROJECT-17018030
[Book] ヒトと霊長類の比較ゲノム:近縁種との比較から見るヒトゲノムの特徴2005
- Author(s)
  黒木陽子、野口英樹、豊田敦、藤山秋佐夫
- Data Source
  KAKENHI-PROJECT-17018031
[Book] 蛋白質核酸酵素(ヒトゲノム配列決定の内容と意義、ヒトとチンパンジーの比較ゲノム, 50)2005
- Author(s)
  黒木陽子, 野口英樹, 豊田敦, 藤山秋佐夫
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] Modeling the SDF-1/CXCR4 protein using advanced artificial intelligence and antagonist screening for Japanese anchovy2024
- Author(s)
  Issei Yahiro、Kyle D. Barnuevo、Oga Sato、Sipra Mohapatra、Atsushi Toyoda、Takehiko Itoh、Kaoru Ohno、Michiya Matsuyama、Tapas Chakraborty、 Kohei Ohta
- Journal Title
  
  Frontiers in Physiology
  
  Volume: 15 Pages: 1349119-1349119
- DOI
  10.3389/fphys.2024.1349119
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00386
[Journal Article] Impact of translational regulation on diel expression revealed by time‐series ribosome profiling in Arabidopsis2024
- Author(s)
  Aoyama Haruka、Arae Toshihiro、Yamashita Yui、Toyoda Atsushi、Naito Satoshi、Sotta Naoyuki、Chiba Yukako
- Journal Title
  
  The Plant Journal
  
  Volume: - Issue: 6 Pages: 1-18
- DOI
  10.1111/tpj.16716
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22KJ0759, KAKENHI-PROJECT-23K05628, KAKENHI-PLANNED-20H05926, KAKENHI-PROJECT-22H04925
[Journal Article] Genome assembly of Genji firefly Nipponoluciola cruciata reveals novel luciferase-like luminescent proteins without peroxisome targeting signal2024
- Author(s)
  Fukuta Kentaro、Kato Dai-ichiro、Maeda Juri、Tsuruta Atsuhiro、Suzuki Hirobumi、Nagano Yukio、Tsukamoto Hisao、Niwa Kazuki、Terauchi Makoto、Toyoda Atsushi、Fujiyama Asao、Noguchi Hideki
- Journal Title
  
  DNA Research
  
  Volume: 31 Issue: 2
- DOI
  10.1093/dnares/dsae006
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K05321, KAKENHI-PROJECT-23K21296, KAKENHI-PROJECT-22H04925
[Journal Article] Rhizoviticin is an alphaproteobacterial tailocin that mediates biocontrol of grapevine crown gall disease2024
- Author(s)
  Ishii Tomoya、Tsuchida Natsuki、Hemelda Niarsi Merry、Saito Kirara、Bao Jiyuan、Watanabe Megumi、Toyoda Atsushi、Matsubara Takehiro、Sato Mayuko、Toyooka Kiminori、Ishihama Nobuaki、Shirasu Ken、Matsui Hidenori、Toyoda Kazuhiro、Ichinose Yuki、Hayashi Tetsuya、Kawaguchi Akira、Noutoshi Yoshiteru
- Journal Title
  
  The ISME Journal
  
  Volume: 18 Issue: 1 Pages: 1-12
- DOI
  10.1093/ismejo/wrad003
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K05157, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00364
[Journal Article] QTL analysis of femaleness in monoecious spinach and fine mapping of a major QTL using an updated version of chromosome-scale pseudomolecules2024
- Author(s)
  Yamano Kaoru、Haseda Akane、Iwabuchi Keisuke、Osabe Takayuki、Sudo Yuki、Pachakkil Babil、Tanaka Keisuke、Suzuki Yutaka、Toyoda Atsushi、Hirakawa Hideki、Onodera Yasuyuki
- Journal Title
  
  PLOS ONE
  
  Volume: 19 Issue: 2 Pages: e0296675-e0296675
- DOI
  10.1371/journal.pone.0296675
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K05525, KAKENHI-PROJECT-22H04925
[Journal Article] A divergent RWP-RK transcription factor determines mating type in heterothallic Closterium2023
- Author(s)
  Sekimoto, H., Komiya, A., Tsuyuki, N., Kawai, J., Kanda, N., Ootsuki, R., Suzuki, Y., Toyoda, A., Fujiyama, A., Kasahara, M., Abe, J., Tsuchikane, Y., Nishiyama, T.
- Journal Title
  
  New Phytologist
  
  Volume: 237 Issue: 5 Pages: 1636-1651
- DOI
  10.1111/nph.18662
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21451, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-21H02549, KAKENHI-PROJECT-19K06827, KAKENHI-PROJECT-18K19365, KAKENHI-PROJECT-19K22448, KAKENHI-PLANNED-22H05177
[Journal Article] Chromosomal-level assembly of Tokudaia osimensis, Tokudaia tokunoshimensis, and Tokudaia muenninki genomes2023
- Author(s)
  Okuno Miki、Mochimaru Yuta、Matsuoka Kentaro、Yamabe Takahiro、Matiz-Ceron Luisa、Jogahara Takamichi、Toyoda Atsushi、Kuroiwa Asato、Itoh Takehiko
- Journal Title
  
  Scientific Data
  
  Volume: 10 Issue: 1 Pages: 927-927
- DOI
  10.1038/s41597-023-02845-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K18093, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K23861
[Journal Article] Phase-separated nuclear bodies of nucleoporin fusions promote condensation of MLL1/CRM1 and rearrangement of 3D genome structure2023
- Author(s)
  Oka Masahiro、Otani Mayumi、Miyamoto Yoichi、Oshima Rieko、Adachi Jun、Tomonaga Takeshi、Asally Munehiro、Nagaoka Yuya、Tanaka Kaori、Toyoda Atsushi、Ichikawa Kazuki、Morishita Shinichi、Isono Kyoichi、Koseki Haruhiko、Nakato Ryuichiro、Ohkawa Yasuyuki、Yoneda Yoshihiro
- Journal Title
  
  Cell Reports
  
  Volume: 42 Issue: 8 Pages: 112884-112884
- DOI
  10.1016/j.celrep.2023.112884
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22KK0111, KAKENHI-PROJECT-22K19275, KAKENHI-PLANNED-19H05745, KAKENHI-PUBLICLY-22H04676, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23H00372, KAKENHI-PROJECT-23K27373
[Journal Article] Extensive copy number variation explains genome size variation in the unicellular zygnematophycean alga, Closterium peracerosum-strigosum-littorale complex2023
- Author(s)
  Kawaguchi, Y., Tsuchikane, Y., Tanaka, K., Taji, T., Suzuki, Y., Toyoda, A., Ito, M., Watano, Y., Nishiyama, T., Sekimoto, H., Tsuchimatsu, T.
- Journal Title
  
  Genome Biol. Evol.
  
  Volume: 15 Issue: 8
- DOI
  10.1093/gbe/evad115
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21451, KAKENHI-PROJECT-22K21352, KAKENHI-PUBLICLY-23H04206, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23H00334
[Journal Article] Genome Sequence of Basidiomycetous Yeast Mrakia gelida MGH-2, Isolated from Skarvsnes Ice-Free Area, East Antarctica2023
- Author(s)
  Tsuji Masaharu、Ishihara Jun-ichi、Toyoda Atsushi、Takahashi Hiroki、Kudoh Sakae
- Journal Title
  
  Microbiology Resource Announcements
  
  Volume: 12 Issue: 1 Pages: 1-3
- DOI
  10.1128/mra.01064-22
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K07001, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K28280
[Journal Article] Complete genomes of mutualistic bacterial co-symbionts ”Candidatus Sulcia muelleri” and ”Candidatus Nasuia deltocephalinicola” of the rice green leafhopper Nephotettix cincticeps2023
- Author(s)
  Minoru Moriyama、Yudai Nishide、Atsushi Toyoda、Takehiko Itoh、Takema Fukatsu
- Journal Title
  
  Microbiology Resource Announcements
  
  Volume: 12(9) Issue: 9
- DOI
  10.1128/mra.00353-23
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Haplotype-resolved chromosomal-level assembly of wasabi (Eutrema japonicum) genome2023
- Author(s)
  Hiroyuki Tanaka、Tatsuki Hori、Shohei Yamamoto、Atsushi Toyoda、Kentaro Yano、Kyoko Yamane、Takehiko Itoh
- Journal Title
  
  Scientific Data
  
  Volume: 10(1) Issue: 1 Pages: 441-441
- DOI
  10.1038/s41597-023-02356-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Identification of small-sized intrachromosomal segments at the ends of INV-DUP-DEL patterns2023
- Author(s)
  Shimojima Yamamoto K, Tamura T, Okamoto N, Nishi E, Noguchi A, Takahashi I, Sawaishi Y, Shimizu M, Kanno H, Minakuchi Y, Toyoda A, Yamamoto T
- Journal Title
  
  Journal of Human Genetics
  
  Volume: 68 Issue: 11 Pages: 751-757
- DOI
  10.1038/s10038-023-01181-x
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K07257, KAKENHI-PROJECT-21K07873, KAKENHI-PROJECT-22H04925
[Journal Article] Chromosome-Scale Genome Assembly of the Freshwater Snail Semisulcospira habei from the Lake Biwa Drainage System2023
- Author(s)
  Osamu Miura、Atsushi Toyoda、Tetsuya Sakurai
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 15(11) Issue: 11
- DOI
  10.1093/gbe/evad208
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K27231
[Journal Article] Long-read sequence analysis for clustered genomic copy number aberrations revealed architectures of intricately intertwined rearrangements2023
- Author(s)
  Tamura T, Shimojima Yamamoto K, Okamoto N, Yagasak H, Morioka I, Kanno H, Minakuchi Y, Toyoda A, Yamamoto T
- Journal Title
  
  American Journal of Medical Genetics Part A
  
  Volume: 191 Issue: 1 Pages: 112-119
- DOI
  10.1002/ajmg.a.62997
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K07873, KAKENHI-PROJECT-22H04925
[Journal Article] Repositioning of centromere‐associated repeats during karyotype evolution in Oryzias fishes2023
- Author(s)
  Ansai Satoshi、Toyoda Atsushi、Yoshida Kohta、Kitano Jun
- Journal Title
  
  Molecular Ecology
  
  Volume: - Issue: 24
- DOI
  10.1111/mec.17222
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22H04983, KAKENHI-PROJECT-22H04925
[Journal Article] BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state2023
- Author(s)
  Xiao Muran、、、、Yokoyama Akihiko、、、、、Inoue Daichi
- Journal Title
  
  Nature Communications
  
  Volume: 14 Issue: 1 Pages: 1-22
- DOI
  10.1038/s41467-023-44081-6
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22KK0119, KAKENHI-PROJECT-21K08385, KAKENHI-PROJECT-20H03717, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00455, KAKENHI-PROJECT-23K24368
[Journal Article] FIGNL1 AAA+ ATPase remodels RAD51 and DMC1 filaments in pre-meiotic DNA replication and meiotic recombination2023
- Author(s)
  Ito Masaru、Furukohri Asako、Matsuzaki Kenichiro、Fujita Yurika、Toyoda Atsushi、Shinohara Akira
- Journal Title
  
  Nature Communications
  
  Volume: 14 Issue: 1 Pages: 6857-6857
- DOI
  10.1038/s41467-023-42576-w
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K18036, KAKENHI-PROJECT-20K15716, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K20059
[Journal Article] Mitochondrial gene defects in Arabidopsis can broadly affect mitochondrial gene expression through copy number2023
- Author(s)
  Hiroki Ayabe、Atsushi Toyoda、Akitoshi Iwamoto、Nobuhiro Tsutsumi、Shin-ichi Arimura
- Journal Title
  
  Plant Physiology
  
  Volume: 191 Issue: 4 Pages: 2256-2275
- DOI
  10.1093/plphys/kiad024
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PUBLICLY-21H00375, KAKENHI-PROJECT-20H05680
[Journal Article] Bioinformatic and fine-scale chromosomal mapping reveal the nature and evolution of eliminated chromosomes in the Japanese hagfish, Eptatretus burgeri, through analysis of repetitive DNA families2023
- Author(s)
  Kohei Nagao、Yoshiki Tanaka、Rei Kajitani、Atsushi Toyoda、Takehiko Itoh、Souichirou Kubota、Yuji Goto
- Journal Title
  
  PLOS ONE
  
  Volume: 18 Issue: 8 Pages: e0286941-e0286941
- DOI
  10.1371/journal.pone.0286941
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Bacteria can maintain rRNA operons solely on plasmids for hundreds of millions of years2023
- Author(s)
  Anda Mizue、Yamanouchi Shun、Cosentino Salvatore、Sakamoto Mitsuo、Ohkuma Moriya、Takashima Masako、Toyoda Atsushi、Iwasaki Wataru
- Journal Title
  
  Nature Communications
  
  Volume: 14 Issue: 1 Pages: 7232-7232
- DOI
  10.1038/s41467-023-42681-w
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-19H05689, KAKENHI-PROJECT-22H04925
[Journal Article] Expanded male sex-determining region conserved during the evolution of homothallism in the green alga Volvox2023
- Author(s)
  Yamamoto, K., Matsuzaki, R., Mahakham, W., Heman, W., Sekimoto, H., Kawachi, M., Minakuchi, Y., Toyoda, A., Nozaki, H.
- Journal Title
  
  iScience
  
  Volume: 26 Issue: 6 Pages: 106893-106893
- DOI
  10.1016/j.isci.2023.106893
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K21451, KAKENHI-PROJECT-22KJ2833, KAKENHI-PROJECT-20H03299, KAKENHI-PROJECT-22H04925
[Journal Article] Chromosome-scale genome assembly of Glycyrrhiza uralensis revealed metabolic gene cluster centred specialized metabolites biosynthesis2022
- Author(s)
  Rai A, Hirakawa H, Rai M, Shimizu Y, Shirasawa K, Kikuchi S, Seki H, Yamazaki M, Toyoda A, Isobe S, Muranaka T, Saito K
- Journal Title
  
  DNA Res.
  
  Volume: 29 Issue: 6 Pages: 1-14
- DOI
  10.1093/dnares/dsac043
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K19082, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-19H05652, KAKENHI-PROJECT-20H02913
[Journal Article] OAT10/SLC22A13 Acts as a Renal Urate Re-Absorber : Clinico-Genetic and Functional Analyses With Pharmacological Impacts2022
- Author(s)
  Yu Toyoda, Yusuke Kawamura, Akiyoshi Nakayama, Keito Morimoto, Seiko Shimizu, Yuki Tanahashi, Takashi Tamura, Takaaki Kondo, Yasufumi Kato, Hirotaka Matsuo, et al.
- Journal Title
  
  Frontiers in Pharmacology
  
  Volume: 13 Pages: 842717-842717
- DOI
  10.3389/fphar.2022.842717
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-21KK0173, KAKENHI-PROJECT-22KK0152, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-20H00568, KAKENHI-PROJECT-23K21618, KAKENHI-PROJECT-22H04923
[Journal Article] Chromosome-scale genome assembly of a Japanese chili pepper landrace, Capsicum annuum ‘Takanotsume’2022
- Author(s)
 Shirasawa Kenta、Hosokawa Munetaka、Yasui Yasuo、Toyoda Atsushi、Isobe Sachiko
- Journal Title
 
 DNA Research
 
 Volume: 30 Issue: 1
- DOI
 10.1093/dnares/dsac052
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-18KK0172, KAKENHI-PLANNED-22H05181, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H02981
[Journal Article] Single-cell transcriptomics of the goldfish retina reveals genetic divergence in the asymmetrically evolved subgenomes after allotetraploidization2022
- Author(s)
  Tetsuo Kon、Kentaro Fukuta、Zelin Chen、Koto Kon-Nanjo、Kota Suzuki、Masakazu Ishikawa、Hikari Tanaka、Shawn M. Burgess、Hideki Noguchi、Atsushi Toyoda、Yoshihiro Omori
- Journal Title
  
  Communications Biology
  
  Volume: 5(1) Issue: 1 Pages: 1404-1404
- DOI
  10.1038/s42003-022-04351-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K24087
[Journal Article] SNP-based heritability estimates of gout and its subtypes determined by genome-wide association studies of clinically defined gout2022
- Author(s)
  Yu Toyoda、Masahiro Nakatochi、Akiyoshi Nakayama、Yusuke Kawamura、Hirofumi Nakaoka、Kenji Wakai、Keitaro Matsuo、Hirotaka Matsuo、Kimiyoshi Ichida、Yukinori Okada、Tappei Takada、Seiko Shimizu、Yuya Shirai、Ken Yamamoto、Ituro Inoue
- Journal Title
  
  Rheumatology
  
  Volume: － Issue: 5 Pages: e144-e146
- DOI
  10.1093/rheumatology/keac597
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-23K21618, KAKENHI-PROJECT-22H04923
[Journal Article] A meta-analysis of genome-wide association studies using Japanese and Taiwanese has revealed novel loci associated with gout susceptibility2022
- Author(s)
  Chang Shun-Jen、Toyoda Yu、Kawamura Yusuke、Nakamura Takahiro、Nakatochi Masahiro、Nakayama Akiyoshi、et al.
- Journal Title
  
  Human Cell
  
  Volume: 35 Issue: 2 Pages: 767-770
- DOI
  10.1007/s13577-021-00665-2
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K23152, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-20H00568, KAKENHI-PROJECT-21KK0173, KAKENHI-PROJECT-16H06277, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-23K21618, KAKENHI-PROJECT-22H04923
[Journal Article] Squalomix: shark and ray genome analysis consortium and its data sharing platform2022
- Author(s)
  Nishimura Osamu、Sakamoto Tatsuya、Semba Yasuko、Yamauchi Shinya、Yamada Kazuyuki、Nishida Kiyonori、Kiyatake Itsuki、Sato Keiichi、Hyodo Susumu、Kadota Mitsutaka、Uno Yoshinobu、Kuraku Shigehiro
- Journal Title
  
  F1000Research
  
  Volume: 11 Pages: 1077-1077
- DOI
  10.12688/f1000research.123591.1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K19312, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H03269, KAKENHI-PROJECT-20J22659, KAKENHI-PROJECT-22KJ2901, KAKENHI-PROJECT-22K15088, KAKENHI-PUBLICLY-21H00428, KAKENHI-PROJECT-23K21320
[Journal Article] Coffee Consumption Reduces Gout Risk Independently of Serum Uric Acid Levels: Mendelian Randomization Analyses Across Ancestry Populations2022
- Author(s)
  Shirai Yuya、Nakayama Akiyoshi、Kawamura Yusuke、Toyoda Yu、Nakatochi Masahiro、Shimizu Seiko、Shinomiya Nariyoshi、Okada Yukinori、Matsuo Hirotaka、Japan Gout Genomics Consortium (Japan Gout)
- Journal Title
  
  ACR Open Rheumatology
  
  Volume: - Issue: 6 Pages: 534-539
- DOI
  10.1002/acr2.11425
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K23152, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-21KK0173, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-22H04923
[Journal Article] HNF1B‐driven three‐dimensional chromatin structure for molecular classification in pancreatic cancers2022
- Author(s)
  Kato Hiroyuki、Tateishi Keisuke、Iwadate Dosuke、Yamamoto Keisuke、Fujiwara Hiroaki、Nakatsuka Takuma、Kudo Yotaro、Hayakawa Yoku、Ijichi Hideaki、Otsuka Motoyuki、Kishikawa Takahiro、Takahashi Ryota、Miyabayashi Koji、Nakai Yousuke、Hirata Yoshihiro、Toyoda Atsushi、Morishita Shinichi、Fujishiro Mitsuhiro
- Journal Title
  
  Cancer Science
  
  Volume: 114 Issue: 4 Pages: 1672-1685
- DOI
  10.1111/cas.15690
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K19517, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-21H02893, KAKENHI-PROJECT-21K15966, KAKENHI-PROJECT-23K07350, KAKENHI-PROJECT-21K07886, KAKENHI-PROJECT-21K07907, KAKENHI-PROJECT-23K24314
[Journal Article] Genome-wide meta-analysis between renal overload type and renal underexcretion type of clinically defined gout in Japanese populations2022
- Author(s)
  Toyoda Yu、Nakayama Akiyoshi、Nakatochi Masahiro、Kawamura Yusuke、Nakaoka Hirofumi、Yamamoto Ken、Shimizu Seiko、Ooyama Hiroshi、Ooyama Keiko、Shimizu Toru、Nagase Mitsuo、Hidaka Yuji、Ichida Kimiyoshi、Inoue Ituro、Shinomiya Nariyoshi、Matsuo Hirotaka
- Journal Title
  
  Molecular Genetics and Metabolism
  
  Volume: - Issue: 3 Pages: 00126-3
- DOI
  10.1016/j.ymgme.2022.01.100
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K23152, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-21KK0173, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18K08520, KAKENHI-PROJECT-19K19434, KAKENHI-PROJECT-23K21618, KAKENHI-PROJECT-22H04923
[Journal Article] The 3′ Pol II pausing at replication-dependent histone genes is regulated by Mediator through Cajal bodies’ association with histone locus bodies2022
- Author(s)
  Suzuki Hidefumi、Abe Ryota、Shimada Miho、Hirose Tomonori、Hirose Hiroko、Noguchi Keisuke、Ike Yoko、Yasui Nanami、Furugori Kazuki、Yamaguchi Yuki、Toyoda Atsushi、Suzuki Yutaka、Yamamoto Tatsuro、Saitoh Noriko、Sato Shigeo、Tomomori-Sato Chieri、Conaway Ronald C.、Conaway Joan W.、Takahashi Hidehisa
- Journal Title
  
  Nature Communications
  
  Volume: 13 Issue: 1 Pages: 2905-2905
- DOI
  10.1038/s41467-022-30632-w
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06482, KAKENHI-PROJECT-22K19466, KAKENHI-ORGANIZER-21H05158, KAKENHI-PLANNED-21H05159, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H03182, KAKENHI-PROJECT-20H03520, KAKENHI-PROJECT-21H02405, KAKENHI-PROJECT-20K06893, KAKENHI-PROJECT-21K19356, KAKENHI-PLANNED-18H05531
[Journal Article] Long-Read-Resolved, Ecosystem-Wide Exploration of Nucleotide and Structural Microdiversity of Lake Bacterioplankton Genomes2022
- Author(s)
  Okazaki Yusuke、Nakano Shin-ichi、Toyoda Atsushi、Tamaki Hideyuki
- Journal Title
  
  mSystems
  
  Volume: 7 Issue: 4 Pages: 1-16
- DOI
  10.1128/msystems.00433-22
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K15182, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-18H05295, KAKENHI-PROJECT-22H00382, KAKENHI-PROJECT-21H03584
[Journal Article] MNX1-HNF1B Axis Is Indispensable for Intraductal Papillary Mucinous Neoplasm Lineages2022
- Author(s)
  Kato H, Tateishi K, Fujiwara H, Nakatsuka T, Yamamoto K, Kudo Y, Hayakawa Y, Nakagawa H, Tanaka Y, Ijichi H, Otsuka M, Iwadate D, Oyama H, Kanai S, Noguchi K, Suzuki T, Sato T, Hakuta R, Ishigaki K, Saito K, Saito T, Takahara N, Kishikawa T, Hamada T, Takahashi R, Miyabayashi K, et al.
- Journal Title
  
  Gastroenterology
  
  Volume: 162 Issue: 4 Pages: 1272-1287
- DOI
  10.1053/j.gastro.2021.12.254
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K08362, KAKENHI-PROJECT-19K08435, KAKENHI-PROJECT-19K16533, KAKENHI-PROJECT-20K08353, KAKENHI-PROJECT-21K07886, KAKENHI-PROJECT-21K07935, KAKENHI-PROJECT-20K16154, KAKENHI-PROJECT-21K15368, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-21K07906, KAKENHI-PROJECT-22K06976, KAKENHI-PROJECT-20K08324, KAKENHI-PROJECT-21K15966
[Journal Article] Whole-genome sequencing analysis and protocol for RNA interference of the endoparasitoid wasp Asobara japonica2022
- Author(s)
  Takumi Kamiyama、Yuko Shimada-Niwa、Hiroyuki Tanaka、Minami Katayama、Takayoshi Kuwabara、Hitoha Mori、Akari Kunihisa、Takehiko Itoh、Atsushi Toyoda、Ryusuke Niwa
- Journal Title
  
  DNA Research
  
  Volume: 29(4) Issue: 4
- DOI
  10.1093/dnares/dsac019
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Genomic and transcriptomic analyses of the subterranean termite Reticulitermes speratus : Gene duplication facilitates social evolution2022
- Author(s)
 Shigenobu Shuji、Hayashi Yoshinobu、Watanabe Dai、Tokuda Gaku、Hojo Masaru Y. et al.
- Journal Title
 
 Proceedings of the National Academy of Sciences
 
 Volume: 119 Issue: 3 Pages: 1-12
- DOI
 10.1073/pnas.2110361119
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-19H03273, KAKENHI-PROJECT-20J01321, KAKENHI-PROJECT-19K06860, KAKENHI-PROJECT-19K22294, KAKENHI-PROJECT-21K19293, KAKENHI-PROJECT-20K15881, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-17H01510
[Journal Article] High-Quality Genome Sequence of Cystobasidium tubakii JCM 31526 T , Isolated from East Ongul Island, Antarctica2022
- Author(s)
 Tsuji Masaharu、Ishihara Jun-ichi、Toyoda Atsushi、Takahashi Hiroki
- Journal Title
 
 Microbiology Resource Announcements
 
 Volume: 11 Issue: 10
- DOI
 10.1128/mra.00741-22
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-21K07001, KAKENHI-PROJECT-22H04925
[Journal Article] Local Adaptation and the Evolution of Genome Architecture in Threespine Stickleback2022
- Author(s)
  Qiushi Li、Dorothea Lindtke、Carlos Rodriguez-Ramirez、Ryo Kakioka、Hiroshi Takahashi、Atsushi Toyoda、Jun Kitano、Rachel L. Ehrlich、Joshua Chang Mell、Sam Yeaman
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 14(6) Issue: 6
- DOI
  10.1093/gbe/evac075
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H03012
[Journal Article] Early embryonic mutations reveal dynamics of somatic and germ cell lineages in mice2022
- Author(s)
  Arikuni Uchimura, Hirotaka Matsumoto, Yasunari Satoh, Yohei Minakuchi, Sayaka Wakayama, Teruhiko Wakayama, Mayumi Higuchi, Atsushi Toyoda, Yoichi Gondo, et al.
- Journal Title
  
  Genome Research
  
  Volume: 32 Pages: 945-955
- DOI
  10.1101/gr.276363.121
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-22H05498, KAKENHI-PROJECT-18H04016, KAKENHI-PUBLICLY-20H05035
[Journal Article] Development of a genome-wide marker design workflow for onions and its application in target amplicon sequencing-based genotyping2022
- Author(s)
  Daisuke Sekine、Satoshi Oku、Tsukasa Nunome、Hideki Hirakawa、Mai Tsujimura、Toru Terachi、Atsushi Toyoda、Masayoshi Shigyo、Shusei Sato、Hikaru Tsukazaki
- Journal Title
  
  DNA Research
  
  Volume: 29(5) Issue: 5
- DOI
  10.1093/dnares/dsac020
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Integrated Population Genomic Analysis and Numerical Simulation to Estimate Larval Dispersal of Acanthaster cf. solaris Between Ogasawara and Other Japanese Regions2022
- Author(s)
  Horoiwa Mizuki、Nakamura Takashi、Yuasa Hideaki、Kajitani Rei、Ameda Yosuke、Sasaki Tetsuro、Taninaka Hiroki、Kikuchi Taisei、Yamakita Takehisa、Toyoda Atsushi、Itoh Takehiko、Yasuda Nina
- Journal Title
  
  Frontiers in Marine Science
  
  Volume: 8 Pages: 688139-688139
- DOI
  10.3389/fmars.2021.688139
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19J21342, KAKENHI-PROJECT-16H06279
[Journal Article] Gene Recruitments and Dismissals in the Argonaut Genome Provide Insights into Pelagic Lifestyle Adaptation and Shell-like Eggcase Reacquisition2022
- Author(s)
  Yoshida Masa-aki、Hirota Kazuki、Imoto Junichi、Okuno Miki、Tanaka Hiroyuki、Kajitani Rei、Toyoda Atsushi、Itoh Takehiko、Ikeo Kazuho、Sasaki Takenori、Setiamarga Davin H E
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 14 Issue: 11
- DOI
  10.1093/gbe/evac140
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K12424, KAKENHI-PROJECT-22K06340, KAKENHI-PROJECT-22H04925
[Journal Article] Turnover of mammal sex chromosomes in the Sry-deficient Amami spiny rat is due to male-specific upregulation of Sox92022
- Author(s)
  Terao M, Ogawa Y, Takada S, Kajitani R, Okuno M, Mochimaru Y, Matsuoka K, Itoh T, Toyoda A, Kono T, Jogahara T, Mizushima S, Kuroiwa A.
- Journal Title
  
  Proceedings of the National Academy of Sciences of the United States of America
  
  Volume: 119 Issue: 49
- DOI
  10.1073/pnas.2211574119
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K05949, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K23930
[Journal Article] Evolutionary History of Sexual Differentiation Mechanism in Insects2022
- Author(s)
  Yasuhiko Chikami、Miki Okuno、Atsushi Toyoda、Takehiko Itoh、Teruyuki Niimi
- Journal Title
  
  Molecular Biology and Evolution
  
  Volume: 39 Issue: 7
- DOI
  10.1093/molbev/msac145
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Complete Genome Sequence of a Hyaluronate Lyase HysA- and HysB-Producing, Methicillin-Resistant Staphylococcus aureus Sequence Type 30, Staphylococcal Cassette Chromosome mec Type IVc Strain Isolated from Furunculosis in Japan2022
- Author(s)
  Yuma Koizumi、Junzo Hisatsune、Atsushi Toyoda、Osamu Yamasaki、Jun Kaneko、Motoyuki Sugai
- Journal Title
  
  Microbiology Resource Announcements
  
  Volume: 11(9) Issue: 9 Pages: 30822-30822
- DOI
  10.1128/mra.00308-22
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20K08652
[Journal Article] Repeated translocation of a supergene underlying rapid sex chromosome turnover in Takifugu pufferfish2022
- Author(s)
 Kabir Ahammad、Ieda Risa、Hosoya Sho、Fujikawa Daigaku、Atsumi Kazufumi、Tajima Shota、Nozawa Aoi、Koyama Takashi、Hirase Shotaro、Nakamura Osamu、Kadota Mitsutaka、Nishimura Osamu、Kuraku Shigehiro、Nakamura Yasukazu、Kobayashi Hisato、Toyoda Atsushi、Tasumi Satoshi、Kikuchi Kiyoshi
- Journal Title
 
 Proceedings of the National Academy of Sciences
 
 Volume: 119 Issue: 23 Pages: 1901-1909
- DOI
 10.1073/pnas.2121469119
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-22K05833, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K21282
[Journal Article] Shared evolutionary trajectories of three independent neo-sex chromosomes in Drosophila2021
- Author(s)
  Masafumi Nozawa, Yohei Minakuchi, Kazuhiro Satomura, Shu Kondo, Atsushi Toyoda, Koichiro Tamura
- Journal Title
  
  Genome Research
  
  Volume: 31 Issue: 11 Pages: 2069-2079
- DOI
  10.1101/gr.275503.121
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H02539, KAKENHI-PROJECT-16H06279
[Journal Article] A spinach genome assembly with remarkable completeness, and its use for rapid identification of candidate genes for agronomic traits.2021
- Author(s)
  Hideki Hirakawa, Atsushi Toyoda, Takehiko Itoh, Yutaka Suzuki, Atsushi J. Nagano, Suguru Sugiyama, Yasuyuki Onodera
- Journal Title
  
  DNA Research
  
  Volume: 28 Issue: 3
- DOI
  10.1093/dnares/dsab004
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] MetaPlatanus: a metagenome assembler that combines long-range sequence links and species-specific features2021
- Author(s)
  Rei Kajitani, Hideki Noguchi, Yasuhiro Gotoh, Yoshitoshi Ogura, Dai Yoshimura, Miki Okuno, Atsushi Toyoda, Tomomi Kuwahara, Tetsuya Hayashi, Takehiko Itoh
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 49 Issue: 22 Pages: e130-e130
- DOI
  10.1093/nar/gkab831
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H03206, KAKENHI-PROJECT-20H04125, KAKENHI-PROJECT-21K19211, KAKENHI-PROJECT-20K15769, KAKENHI-PROJECT-16H06279
[Journal Article] Substantial anti-gout effect conferred by common and rare dysfunctional variants of URAT1/SLC22A122021
- Author(s)
  Toyoda Yu、Kawamura Yusuke、Nakayama Akiyoshi、Nakaoka Hirofumi、Higashino Toshihide、Shimizu Seiko、Ooyama Hiroshi、Morimoto Keito、Uchida Naohiro、Shigesawa Ryuichiro、Takeuchi Kenji、Inoue Ituro、Ichida Kimiyoshi、Suzuki Hiroshi、Shinomiya Nariyoshi、Takada Tappei、Matsuo Hirotaka
- Journal Title
  
  Rheumatology
  
  Volume: - Issue: 11 Pages: 5224-5232
- DOI
  10.1093/rheumatology/keab327
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18H02685, KAKENHI-PROJECT-18KK0247, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20K23152, KAKENHI-PROJECT-20H00568, KAKENHI-PROJECT-16H06277, KAKENHI-PROJECT-19K16441
[Journal Article] Increase of serum uric acid levels associated with APOE ε2 haplotype: a clinico-genetic investigation and in vivo approach2021
- Author(s)
  Ogura Masatsune、Toyoda Yu、Sakiyama Masayuki、Kawamura Yusuke、Nakayama Akiyoshi、et al.
- Journal Title
  
  Human Cell
  
  Volume: 34 Issue: 6 Pages: 1727-1733
- DOI
  10.1007/s13577-021-00609-w
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K23152, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-20H00568, KAKENHI-PROJECT-20H04100, KAKENHI-PROJECT-20K08439, KAKENHI-PROJECT-21K08143, KAKENHI-PROJECT-16H06277, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-23K21618
[Journal Article] Genomic Signatures for Species-Specific Adaptation in Lake Victoria Cichlids Derived from Large-Scale Standing Genetic Variation2021
- Author(s)
  Nakamura Haruna、Aibara Mitsuto、Kajitani Rei、Mrosso Hillary D J、Mzighani Semvua I、Toyoda Atsushi、Itoh Takehiko、Okada Norihiro、Nikaido Masato
- Journal Title
  
  Molecular Biology and Evolution
  
  Volume: in press Issue: 8 Pages: 3111-3125
- DOI
  10.1093/molbev/msab084
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20KK0167, KAKENHI-PROJECT-20J13861, KAKENHI-PROJECT-16H06279
[Journal Article] Comparative analysis using the draft genome sequence of California poppy (Eschscholzia californica) for exploring the candidate genes involved in benzylisoquinoline alkaloid biosynthesis2021
- Author(s)
  Yasuyuki Yamada, Hideki Hirakawa, Kentaro Hori, Yohei Minakuchi, Atsushi Toyoda, Nobukazu Shitan, Fumihiko Sato
- Journal Title
  
  Bioscience, Biotechnology, and Biochemistry
  
  Volume: 85 Issue: 4 Pages: 851-859
- DOI
  10.1093/bbb/zbaa091
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Genome features of common vetch (Vicia sativa) in natural habitats.2021
- Author(s)
  Kenta Shirasawa, Shunichi Kosugi, Kazuhiro Sasaki, Andrea Ghelfi, Koei Okazaki, Atsushi Toyoda, Hideki Hirakawa, Sachiko Isobe
- Journal Title
  
  Plant Direct
  
  Volume: 5 Issue: 10
- DOI
  10.1002/pld3.352
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07264, KAKENHI-PROJECT-21K06130, KAKENHI-PROJECT-16H06279
[Journal Article] Hamster PIWI proteins bind to piRNAs with stage-specific size variations during oocyte maturation2021
- Author(s)
  Ishino Kyoko、Hasuwa Hidetoshi、Yoshimura Jun、Iwasaki Yuka W、Nishihara Hidenori、Seki Naomi M、Hirano Takamasa、Tsuchiya Marie、Ishizaki Hinako、Masuda Harumi、Kuramoto Tae、Saito Kuniaki、Sakakibara Yasubumi、Toyoda Atsushi、Itoh Takehiko、Siomi Mikiko C、Morishita Shinichi、Siomi Haruhiko
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 49 Issue: 5 Pages: 2700-2720
- DOI
  10.1093/nar/gkab059
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H05466, KAKENHI-PUBLICLY-19H05268, KAKENHI-PLANNED-19H05753, KAKENHI-PROJECT-18H02421, KAKENHI-PROJECT-18J22025, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17K19424, KAKENHI-PROJECT-20H03175, KAKENHI-PROJECT-16H06276
[Journal Article] Species divergence and repeated ancient hybridization in a Sulawesian lake system2021
- Author(s)
  Ixchel F. Mandagi, Ryo Kakioka, Javier Montenegro, Hirozumi Kobayashi, Kawilarang W. A. Masengi, Nobuyuki Inomata, Atsushi J. Nagano, Atsushi Toyoda, Satoshi Ansai, Masatoshi Matsunami, Ryosuke Kimura, Jun Kitano, Junko Kusumi, Kazunori Yamahira
- Journal Title
  
  JOURNAL OF EVOLUTIONARY BIOLOGY
  
  Volume: 34 Issue: 11 Pages: 1767-1780
- DOI
  10.1111/jeb.13932
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17H01675, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-21H04782, KAKENHI-PROJECT-19J22686
[Journal Article] Leaf Bleaching in Rice: A New Disease in Vietnam Caused by Methylobacterium indicum, Its Genomic Characterization and the Development of a Suitable Detection Technique2021
- Author(s)
 Lai Khoa、Nguyen Ngoc Thai、Yasuda Michiko、Dastogeer Khondoker M.G.、Toyoda Atsushi、Higashi Koichi、Kurokawa Ken、Nguyen Nga Thi Thu、Komatsu Ken、Okazaki Shin
- Journal Title
 
 Microbes and Environments
 
 Volume: 36 Issue: 4 Pages: n/a
- DOI
 10.1264/jsme2.ME21035
- NAID
 130008113077
- ISSN
 1342-6311, 1347-4405
- Language
 English
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
 KAKENHI-PROJECT-20J40199, KAKENHI-PROJECT-16H06279
[Journal Article] A Proposal for Practical Diagnosis of Renal Hypouricemia: Evidenced from Genetic Studies of Nonfunctional Variants of URAT1/SLC22A12 among 30,685 Japanese Individuals2021
- Author(s)
  Kawamura Yusuke、Nakayama Akiyoshi、Shimizu Seiko、Toyoda Yu、et al.
- Journal Title
  
  Biomedicines
  
  Volume: 9 Issue: 8 Pages: 1012-1012
- DOI
  10.3390/biomedicines9081012
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K23152, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-20H00568, KAKENHI-PROJECT-20H03943, KAKENHI-PROJECT-16H06277, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-23K21618
[Journal Article] Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates2021
- Author(s)
  Tuan V P、Yahara K、Dung H D Q、Binh T T、Huu T P、Tri T D、Thuan N P M、Khien V V、Trang T T H、Phuc B H、Tshibangu-Kabamba E、Matsumoto T、Akada J、Suzuki R、Okimoto T、Kodama M、Murakami K、Yano H、Fukuyo M、Takahashi N、Kato M、Nishiumi S、Azuma T、Ogura Y、Hayashi T、Toyoda A、Kobayashi I、Yamaoka Y
- Journal Title
  
  Microbial Genomics
  
  Volume: 7 Issue: 11 Pages: 1-17
- DOI
  10.1099/mgen.0.000680
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K16707, KAKENHI-PROJECT-19H03473, KAKENHI-PROJECT-20K07394, KAKENHI-PROJECT-21K07898, KAKENHI-PROJECT-21K08010, KAKENHI-PROJECT-18KK0266, KAKENHI-PROJECT-16H06279
[Journal Article] Genomics and transcriptomics of the green mussel explain the durability of its byssus2021
- Author(s)
  Koji Inoue, Yuki Yoshioka, Hiroyuki Tanaka, Azusa Kinjo, Mieko Sassa, Ikuo Ueda, Chuya Shinzato, Atsushi Toyoda, Takehiko Itoh
- Journal Title
  
  Scientific Reports
  
  Volume: 11 Issue: 1 Pages: 992-992
- DOI
  10.1038/s41598-021-84948-6
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18H02261
[Journal Article] Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis2021
- Author(s)
  Rai Amit、Hirakawa Hideki、Nakabayashi Ryo、Kikuchi Shinji、Hayashi Koki、Rai Megha、Tsugawa Hiroshi、Nakaya Taiki、Mori Tetsuya、Nagasaki Hideki、Fukushi Runa、Kusuya Yoko、Takahashi Hiroki、Uchiyama Hiroshi、Toyoda Atsushi、Hikosaka Shoko、Goto Eiji、Saito Kazuki、Yamazaki Mami
- Journal Title
  
  Nature Communications
  
  Volume: 12 Issue: 1 Pages: 405-405
- DOI
  10.1038/s41467-020-20508-2
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K19155, KAKENHI-PLANNED-16H06454, KAKENHI-PROJECT-19H05652, KAKENHI-PROJECT-17K08018, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-19K16391
[Journal Article] Elucidation of the speciation history of three sister species of crown-of-thorns starfish (Acanthaster spp.) based on genomic analysis2021
- Author(s)
  Hideaki Yuasa, Rei Kajitani, Yuta Nakamura, Kazuki Takahashi, Miki Okuno, Fumiya Kobayashi, Takahiro Shinoda, Atsushi Toyoda, Yutaka Suzuki, Nalinee Thongtham, Zac Forsman, Omri Bronstein, Davide Seveso, Enrico Montalbetti, Coralie Taquet, Gal Eyal, Nina Yasuda, Takehiko Itoh
- Journal Title
  
  DNA Research
  
  Volume: 28 Issue: 4
- DOI
  10.1093/dnares/dsab012
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H03206, KAKENHI-PROJECT-16H06279
[Journal Article] The full mitochondrial genome sequence of the greater argonaut Argonauta argo (Cephalopoda, Argonautoidea) and its phylogenetic position in Octopodiformes2021
- Author(s)
  Hirota Kazuki、Yoshida Masa-aki、Itoh Takehiko、Toyoda Atsushi、Setiamarga Davin H. E.
- Journal Title
  
  Mitochondrial DNA Part B
  
  Volume: 6 Issue: 4 Pages: 1451-1453
- DOI
  10.1080/23802359.2021.1911710
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K12424, KAKENHI-PROJECT-18K06363, KAKENHI-PROJECT-19K21646, KAKENHI-PROJECT-16H06279
[Journal Article] Genome sequencing of the multicellular alga Astrephomene provides insights into convergent evolution of germ-soma differentiation2021
- Author(s)
  Yamashita Shota、Yamamoto Kayoko、Matsuzaki Ryo、Suzuki Shigekatsu、Yamaguchi Haruyo、Hirooka Shunsuke、Minakuchi Yohei、Miyagishima Shin-ya、Kawachi Masanobu、Toyoda Atsushi、Nozaki Hisayoshi
- Journal Title
  
  Scientific Reports
  
  Volume: 11 Issue: 1 Pages: 22231-22231
- DOI
  10.1038/s41598-021-01521-x
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20H03299, KAKENHI-PROJECT-16H06279
[Journal Article] De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum lycopersicum var. cerasiforme, by long-read sequencing2021
- Author(s)
  Hitomi Takei, Kenta Shirasawa, Kosuke Kuwabara, Atsushi Toyoda, Yuma Matsuzawa, Shinji Iioka, Tohru Ariizumi
- Journal Title
  
  DNA Research
  
  Volume: 28 Issue: 1
- DOI
  10.1093/dnares/dsaa029
- NAID
  120007186927
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] A global phylogenetic analysis of Japanese tonsil-derived Epstein-Barr virus strains using viral whole-genome cloning and long-read sequencing2021
- Author(s)
  Yajima Misako、Kakuta Risako、Saito Yutaro、Kitaya Shiori、Toyoda Atsushi、Ikuta Kazufumi、Yasuda Jun、Ohta Nobuo、Kanda Teru
- Journal Title
  
  Journal of General Virology
  
  Volume: 102 Issue: 3
- DOI
  10.1099/jgv.0.001549
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K09184, KAKENHI-PROJECT-20K08213, KAKENHI-PROJECT-19H03795, KAKENHI-PROJECT-17K07193, KAKENHI-PROJECT-18K10057, KAKENHI-PROJECT-16H06279
[Journal Article] Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes2021
- Author(s)
  Ansai Satoshi、Mochida Koji、Fujimoto Shingo、Mokodongan Daniel F.、Sumarto Bayu Kreshna Adhitya、Masengi Kawilarang W. A.、Hadiaty Renny K.、Nagano Atsushi J.、Toyoda Atsushi、Naruse Kiyoshi、Yamahira Kazunori、Kitano Jun
- Journal Title
  
  Nature Communications
  
  Volume: 12 Issue: 1 Pages: 1350-1350
- DOI
  10.1038/s41467-021-21697-0
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17H01675, KAKENHI-PROJECT-19K16232, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-19H01003
[Journal Article] Three genomes in the algal genus Volvox reveal the fate of a haploid sex-determining region after a transition to homothallism2021
- Author(s)
  Kayoko Yamamoto, Takashi Hamaji, Hiroko Kawai-Toyooka, Ryo Matsuzaki, Fumio Takahashi, Yoshiki Nishimura, Masanobu Kawachi, Hideki Noguchi, Yohei Minakuchi, James G. Umen, Atsushi Toyoda, Hisayoshi Nozaki
- Journal Title
  
  The Proceedings of the National Academy of Sciences
  
  Volume: 118 Issue: 21
- DOI
  10.1073/pnas.2100712118
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07510, KAKENHI-PROJECT-19K22446, KAKENHI-PROJECT-18H02460, KAKENHI-PROJECT-20H03299, KAKENHI-PROJECT-20K06692, KAKENHI-PROJECT-20K06766, KAKENHI-PROJECT-21K06294, KAKENHI-PROJECT-16H06279
[Journal Article] Comparative genomics of Glandirana rugosa using unsupervised AI reveals a high CG frequency2021
- Author(s)
  Katsura Y, Ikemura T, Kajitani R, Toyoda A, Itoh T, Ogata M, Miura I, Wada K, Wada Y, and Satta Y
- Journal Title
  
  Life Science Alliance
  
  Volume: - Issue: 5 Pages: e202000905-e202000905
- DOI
  10.26508/lsa.202000905
- NAID
  120007153083
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06788, KAKENHI-PROJECT-18K14766, KAKENHI-PROJECT-16H06279
[Journal Article] Insights into the genomic evolution of insects from cricket genomes2021
- Author(s)
  Guillem Ylla, Taro Nakamura, Takehiko Itoh, Rei Kajitani, Atsushi Toyoda, Sayuri Tomonari, Tetsuya Bando, Yoshiyasu Ishimaru, Takahito Watanabe, Masao Fuketa, Yuji Matsuoka, Austen A. Barnett, Sumihare Noji, Taro Mito & Cassandra G. Extavour
- Journal Title
  
  Communications Biology
  
  Volume: 4 Issue: 1 Pages: 733-733
- DOI
  10.1038/s42003-021-02197-9
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06184, KAKENHI-PROJECT-19K06691, KAKENHI-PROJECT-21K06121, KAKENHI-PROJECT-16H06279
[Journal Article] Genetic epidemiological analysis of hypouricaemia from 4993 Japanese on non-functional variants of URAT1/SLC22A12 gene2021
- Author(s)
 Nakayama Akiyoshi、Kawamura Yusuke、Toyoda Yu、Shimizu Seiko、Kawaguchi Makoto、Aoki Yuka、Takeuchi Kenji、Okada Rieko、Kubo Yoko、Imakiire Toshihiko、Iwasawa Satoko、Nakashima Hiroshi、Tsunoda Masashi、Ito Keiichi、Kumagai Hiroo、Takada Tappei、Ichida Kimiyoshi、Shinomiya Nariyoshi、Matsuo Hirotaka
- Journal Title
 
 Rheumatology
 
 Volume: 61 Issue: 3 Pages: 1276-1281
- DOI
 10.1093/rheumatology/keab545
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-20K23152, KAKENHI-PROJECT-20H00566, KAKENHI-PROJECT-20H00568, KAKENHI-PROJECT-16H06277, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-23K21618
[Journal Article] Single-cell RNA-seq analysis reveals penaeid shrimp hemocyte subpopulations and cell differentiation process2021
- Author(s)
  Koiwai Keiichiro、Koyama Takashi、Tsuda Soichiro、Toyoda Atsushi、Kikuchi Kiyoshi、Suzuki Hiroaki、Kawano Ryuji
- Journal Title
  
  eLife
  
  Volume: 10
- DOI
  10.7554/elife.66954
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K15603, KAKENHI-PROJECT-16H06279
[Journal Article] Whole-Genome Sequencing of a 900-Year-Old Human Skeleton Supports Two Past Migration Events from the Russian Far East to Northern Japan2021
- Author(s)
  Sato Takehiro、Adachi Noboru、Kimura Ryosuke、Hosomichi Kazuyoshi、Yoneda Minoru、Oota Hiroki、Tajima Atsushi、Toyoda Atsushi、Kanzawa-Kiriyama Hideaki、Matsumae Hiromi、Koganebuchi Kae、Shimizu Kentaro K、Shinoda Ken-ichi、Hanihara Tsunehiko、Weber Andrzej、Kato Hirofumi、Ishida Hajime
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 13 Issue: 9 Pages: 192-192
- DOI
  10.1093/gbe/evab192
- NAID
  120007170565
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K21705, KAKENHI-PROJECT-17H00939, KAKENHI-PLANNED-18H05507, KAKENHI-PUBLICLY-21H00342, KAKENHI-PUBLICLY-21H00347, KAKENHI-PROJECT-18H03590, KAKENHI-PROJECT-21H04352, KAKENHI-PROJECT-21H04363, KAKENHI-PROJECT-21H04916, KAKENHI-PROJECT-19H01356, KAKENHI-PROJECT-20H03332, KAKENHI-PROJECT-21K19289, KAKENHI-PROJECT-21K13141, KAKENHI-PROJECT-20KK0166, KAKENHI-PROJECT-16H06279, KAKENHI-PLANNED-16H06412, KAKENHI-PROJECT-16H02527, KAKENHI-PLANNED-19H05737
[Journal Article] Differences in the contributions of sex linkage and androgen regulation to sex-biased gene expression in juvenile and adult sticklebacks.2020
- Author(s)
  Kitano J, Kakioka R, Ishikawa A, Toyoda A Kusakabe M.
- Journal Title
  
  Journal of Evolutionary Biology
  
  Volume: 33 Issue: 8 Pages: 1129-1138
- DOI
  10.1111/jeb.13662
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K06720, KAKENHI-PROJECT-19KK0187, KAKENHI-PROJECT-19H01003, KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-20H04873, KAKENHI-PROJECT-19H03277
[Journal Article] Comparative genomic analyses illuminate the distinct evolution of megabats within Chiroptera.2020
- Author(s)
  Nikaido M, Kondo S, Zhang Z, Wu J, Nishihara H, Niimura Y, Suzuki S, Touhara K, Suzuki Y, Noguchi H, Minakuchi Y, Toyoda A, Fujiyama A, Sugano S, Yoneda M, Kai C
- Journal Title
  
  DNA Res
  
  Volume: 27 Issue: 4
- DOI
  10.1093/dnares/dsaa021
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06359, KAKENHI-PROJECT-18F18385, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20H03307
[Journal Article] Long-read bitter gourd (Momordica charantia) genome and the genomic architecture of non-classic domestication2020
- Author(s)
  Hideo Matsumura, Min-Chien Hsiao, Ya-Ping Lin, Atsushi Toyoda, Naoki Taniai4 Kazuhiko Tarora, Naoya Urasaki, Shashi S. Anand, Narinder P. S. Dhillon, Roland Schafleitner, Cheng-Ruei Lee
- Journal Title
  
  Proceedings of the National Academy of Science USA
  
  Volume: 117 Issue: 25 Pages: 14543-14551
- DOI
  10.1073/pnas.1921016117
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Ancient Jomon genome sequence analysis sheds light on migration patterns of early East Asian populations2020
- Author(s)
  Gakuhari T. ,Yoneda M. et.al.
- Journal Title
  
  Communications Biology
  
  Volume: 3 Issue: 1 Pages: 1-40
- DOI
  10.1038/s42003-020-01162-2
- NAID
  120007168801
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-INTERNATIONAL-15K21756, KAKENHI-INTERNATIONAL-16K21721, KAKENHI-PUBLICLY-19H04526, KAKENHI-PUBLICLY-19H05349, KAKENHI-PUBLICLY-20H05135, KAKENHI-PROJECT-17H01453, KAKENHI-PROJECT-18H00735, KAKENHI-PROJECT-19H01356, KAKENHI-PROJECT-19K22753, KAKENHI-PROJECT-16H06279, KAKENHI-PLANNED-18H05507, KAKENHI-PUBLICLY-20H05129, KAKENHI-PROJECT-17H00939, KAKENHI-PROJECT-18H03590, KAKENHI-PROJECT-18H03593, KAKENHI-PROJECT-20H01323, KAKENHI-PLANNED-16H06408, KAKENHI-PLANNED-16H06412, KAKENHI-PLANNED-17H06381, KAKENHI-PLANNED-19H05737, KAKENHI-PROJECT-16H06320
[Journal Article] Characteristics of induced mutations in offspring derived from irradiated mouse spermatogonia and mature oocytes2020
- Author(s)
  Yasunari Satoh, Jun-ichi Asakawa, Mayumi Nishimura, Tony Kuo, Norio Shinkai, Harry M. Cullings, Yohei Minakuchi, Jun Sese, Atsushi Toyoda, Yoshiya Shimada, Nori Nakamura, Arikuni Uchimura
- Journal Title
  
  Scientific Reports
  
  Volume: 10 Issue: 1 Pages: 37-37
- DOI
  10.1038/s41598-019-56881-2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K19340, KAKENHI-PROJECT-16H06279
[Journal Article] Networking and Specificity-Changing DNA Methyltransferases in Helicobacter pylori2020
- Author(s)
  Yano Hirokazu、Alam Md. Zobaidul、Rimbara Emiko、Shibata Tomoko F.、Fukuyo Masaki、Furuta Yoshikazu、Nishiyama Tomoaki、Shigenobu Shuji、Hasebe Mitsuyasu、Toyoda Atsushi、Suzuki Yutaka、Sugano Sumio、Shibayama Keigo、Kobayashi Ichizo
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 11 Pages: 1628-1628
- DOI
  10.3389/fmicb.2020.01628
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K14672, KAKENHI-PROJECT-19K16707, KAKENHI-PROJECT-16H06279
[Journal Article] Ethylene signaling mediates host invasion by parasitic plants2020
- Author(s)
  Cui Songkui、Kubota Tomoya、Nishiyama Tomoaki、Ishida Juliane K.、Shigenobu Shuji、Shibata Tomoko F.、Toyoda Atsushi、Hasebe Mitsuyasu、Shirasu Ken、Yoshida Satoko
- Journal Title
  
  Science Advances
  
  Volume: 6 Issue: 44 Pages: 1-11
- DOI
  10.1126/sciadv.abc2385
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K22432, KAKENHI-PROJECT-17H06172, KAKENHI-PROJECT-18H02464, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-19K16169
[Journal Article] RNA interference-independent reprogramming of DNA methylation in Arabidopsis2020
- Author(s)
  To Taiko Kim、Nishizawa Yuichiro、Inagaki Soichi、Tarutani Yoshiaki、Tominaga Sayaka、Toyoda Atsushi、Fujiyama Asao、Berger Frederic、Kakutani Tetsuji
- Journal Title
  
  Nature Plants
  
  Volume: 6 Issue: 12 Pages: 1455-1467
- DOI
  10.1038/s41477-020-00810-z
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-19H05740, KAKENHI-PLANNED-20H05913, KAKENHI-PROJECT-17K15059, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-19H00995
[Journal Article] Genome-wide patterns of divergence and introgression after secondary contact between Pungitius sticklebacks2020
- Author(s)
  Yamasaki Yo Y.、Kakioka Ryo、Takahashi Hiroshi、Toyoda Atsushi、Nagano Atsushi J.、Machida Yoshiyasu、M?ller Peter R.、Kitano Jun
- Journal Title
  
  Philosophical Transactions of the Royal Society B: Biological Sciences
  
  Volume: 375 Issue: 1806 Pages: 20190548-20190548
- DOI
  10.1098/rstb.2019.0548
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H01003, KAKENHI-PROJECT-20J01503, KAKENHI-PROJECT-18K05686, KAKENHI-PROJECT-18K14764, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18H02509, KAKENHI-PROJECT-20H03012
[Journal Article] Dysfunctional missense variant of OAT10/SLC22A13 decreases gout risk and serum uric acid levels.2020
- Author(s)
  Higashino T, Morimoto K, Nakaoka H, Toyoda Y, Kawamura Y, Shimizu S, Nakamura T, Hosomichi K, Nakayama A, Ooyama K, Ooyama H, Shimizu T, Ueno M, Ito T, Tamura T, Naito M, Nakashima H, Kawaguchi M, Takao M, Kawai Y, Osada N, Ichida K, Yamamoto K, Suzuki H, Shinomiya N, Inoue I, Takada T, Matsuo H.
- Journal Title
  
  Ann Rheum Dis.
  
  Volume: 79(1) Issue: 1 Pages: 164-166
- DOI
  10.1136/annrheumdis-2019-216044
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KK0247, KAKENHI-PUBLICLY-19H05344, KAKENHI-PROJECT-16H01808, KAKENHI-PROJECT-17H04128, KAKENHI-PROJECT-18H02685, KAKENHI-PROJECT-16H06279, KAKENHI-PLANNED-18H05511
[Journal Article] A genome database for a Japanese population of the larvacean Oikopleura dioica.2020
- Author(s)
  Wang, K., Tomura, R., Chen, W., Kiyooka, M., Ishizaki, H., Aizu, T., Minakuchi, Y., Seki, Yutaka Suzuki, M., Omotezako, T., Suyama, R., Masunaga, A., Plessy, C., Luscombe, N.M., Dantec, C., Lemaire, P., Itoh, T., Toyoda, A., Nishida, H., and Onuma, T.A.
- Journal Title
  
  Dev. Growth Differ.
  
  Volume: 62 Issue: 6 Pages: 450-461
- DOI
  10.1111/dgd.12689
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17KT0023, KAKENHI-PROJECT-18K06256, KAKENHI-PUBLICLY-18H04763, KAKENHI-PROJECT-19H03234, KAKENHI-PROJECT-16H06279, KAKENHI-PLANNED-20H05946
[Journal Article] Differential dynamics and impacts of prophages and plasmids on the pangenome and virulence factor repertoires of Shiga toxin-producing Escherichia coli O145:H282020
- Author(s)
  Nakamura K., Murase K., Sato MP., Toyoda A., Itoh T., Mainil JG., Pierard D., Yoshino S., Kimata K., Isobe J., Seto K., Etoh Y., Narimatsu H., Saito S., Yatsuyanagi J., Lee K., Iyoda S., Ohnishi M., Ooka T., Gotoh Y., Ogura Y., Hayashi T.
- Journal Title
  
  Microbial Genomics
  
  Volume: 6 Issue: 1
- DOI
  10.1099/mgen.0.000323
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K07116, KAKENHI-PROJECT-16H06279
[Journal Article] Complete Genome Sequence Data of Tumorigenic Rhizobium vitis Strain VAT03-9, a Causal Agent of Grapevine Crown Gall Disease2020
- Author(s)
  Yoshiteru Noutoshi, Atsushi Toyoda, Tomoya Ishii, Kirara Saito, Megumi Watanabe, Akira Kawaguchi
- Journal Title
  
  Molecular Plant-Microbe Interactions®
  
  Volume: 33 Issue: 11 Pages: 1280-1282
- DOI
  10.1094/mpmi-07-20-0180-a
- NAID
  120007004826
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20K20572
[Journal Article] The Ficus erecta genome aids Ceratocystis canker resistance breeding in common fig (F. carica).2020
- Author(s)
  Shirasawa K, Yakushiji H, Nishimura R, Morita T, Jikumaru S, Ikegami H, Toyoda A, Hirakawa H, Isobe S
- Journal Title
  
  Plant J
  
  Volume: 102 Issue: 6 Pages: 1313-1322
- DOI
  10.1111/tpj.14703
- Description
  in press
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Complete Genome Sequence Data of Nonpathogenic and Nonantagonistic Strain of Rhizobium vitis VAR06-30 Isolated From Grapevine Rhizosphere2020
- Author(s)
  Yoshiteru Noutoshi, Atsushi Toyoda, Tomoya Ishii, Kirara Saito, Megumi Watanabe, Akira Kawaguchi
- Journal Title
  
  Molecular Plant-Microbe Interactions®
  
  Volume: 33 Issue: 11 Pages: 1283-1285
- DOI
  10.1094/mpmi-07-20-0182-a
- NAID
  120007004828
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20K20572
[Journal Article] The physiological potential of anammox bacteria as revealed by their core genome structure2020
- Author(s)
  Okubo Takashi、Toyoda Atsushi、Fukuhara Kohei、Uchiyama Ikuo、Harigaya Yuhki、Kuroiwa Megumi、Suzuki Takuma、Murakami Yuka、Suwa Yuichi、Takami Hideto
- Journal Title
  
  DNA Research
  
  Volume: 28 Issue: 1 Pages: 1-12
- DOI
  10.1093/dnares/dsaa028
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17H00793, KAKENHI-PROJECT-17K19292, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-19H04241, KAKENHI-PROJECT-20H03029
[Journal Article] The mechanoreceptor DEG-1 regulates cold tolerance in Caenorhabditis elegans2020
- Author(s)
  Takagaki N., Ohta A., Ohnishi K., Kawanabe A., Minakuchi Y., Toyoda A., Fujiwara Y., Kuhara A.
- Journal Title
  
  EMBO reports
  
  Volume: 21 Issue: 3 Pages: 1-14
- DOI
  10.15252/embr.201948671
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K06344, KAKENHI-PROJECT-19K06585, KAKENHI-PROJECT-18K19299, KAKENHI-PLANNED-15H05928, KAKENHI-PROJECT-18H02484, KAKENHI-PROJECT-19H03403, KAKENHI-PROJECT-18J10116, KAKENHI-PROJECT-19J10052, KAKENHI-PROJECT-17K19410, KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-18H04697, KAKENHI-PROJECT-19J40017
[Journal Article] Targeted gene disruption of ATP synthases 6‐1 and 6‐2 in the mitochondrial genome of Arabidopsis thaliana by mitoTALENs2020
- Author(s)
  Arimura Shin‐ichi、Ayabe Hiroki、Sugaya Hajime、Okuno Miki、Tamura Yoshiko、Tsuruta Yu、Watari Yuta、Yanase Shungo、Yamauchi Takaki、Itoh Takehiko、Toyoda Atsushi、Takanashi Hideki、Tsutsumi Nobuhiro
- Journal Title
  
  The Plant Journal
  
  Volume: 104 Issue: 6 Pages: 1459-1471
- DOI
  10.1111/tpj.15041
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K19202, KAKENHI-PROJECT-19KK0391, KAKENHI-PROJECT-19H02927, KAKENHI-PROJECT-18K05570, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20H05680
[Journal Article] Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago2020
- Author(s)
  Kakioka Ryo、Mori Seiichi、Kokita Tomoyuki、Hosoki Takuya K.、Nagano Atsushi J.、Ishikawa Asano、Kume Manabu、Toyoda Atsushi、Kitano Jun
- Journal Title
  
  BMC Evolutionary Biology
  
  Volume: 20 Issue: 1 Pages: 143-143
- DOI
  10.1186/s12862-020-01713-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19KK0187, KAKENHI-PROJECT-19H01003, KAKENHI-PROJECT-20J13557, KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-20H04873, KAKENHI-PROJECT-19H03277
[Journal Article] Accumulation of deleterious mutations in landlocked threespine stickleback populations2020
- Author(s)
  Yoshida, K., Ravinet, M., Makino, T., Toyoda, A., Kokita, T., Mori, S., and Kitano, J.
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 12 Issue: 4 Pages: 479-492
- DOI
  10.1093/gbe/evaa065
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H01003, KAKENHI-PROJECT-17H03728, KAKENHI-PROJECT-16H06279
[Journal Article] A ubiquitous subcuticular bacterial symbiont of a coral predator, the crown-of-thorns starfish, in the Indo-Pacific2020
- Author(s)
  Wada Naohisa、Yuasa Hideaki、Kajitani Rei、Gotoh Yasuhiro、Ogura Yoshitoshi、Yoshimura Dai、Toyoda Atsushi、Tang Sen-Lin、Higashimura Yukihiro、Sweatman Hugh、Forsman Zac、Bronstein Omri、Eyal Gal、Thongtham Nalinee、Itoh Takehiko、Hayashi Tetsuya、Yasuda Nina
- Journal Title
  
  Microbiome
  
  Volume: 8 Issue: 1 Pages: 123-123
- DOI
  10.1186/s40168-020-00880-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17H04996, KAKENHI-PROJECT-18J23317, KAKENHI-PROJECT-16H06279
[Journal Article] Complete Genome Sequence Data of Nonpathogenic Strain Rhizobium vitis VAR03-1, a Biological Control Agent for Grapevine Crown Gall Disease2020
- Author(s)
  Yoshiteru Noutoshi, Atsushi Toyoda, Tomoya Ishii, Kirara Saito, Megumi Watanabe, Akira Kawaguchi
- Journal Title
  
  Molecular Plant-Microbe Interactions®
  
  Volume: 33 Issue: 12 Pages: 1451-1453
- DOI
  10.1094/mpmi-07-20-0181-a
- NAID
  120007004827
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20K20572
[Journal Article] Corrigendum : Networking and Specificity-Changing DNA Methyltransferases in Helicobacter pylori2020
- Author(s)
  Hirokazu Yano, Md. Zobaidul Alam, Emiko Rimbara, Tomoko F. Shibata, Masaki Fukuyo, Yoshikazu Furuta, Atsushi Toyoda, Yutaka Suzuki, Sumio Sugano, Keigo Shibayama, Ichizo Kobayashi, et al.
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 11
- DOI
  10.3389/fmicb.2020.596598
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] The Genetic Basis of Morphological Diversity in Domesticated Goldfish2020
- Author(s)
  Kon Tetsuo、Omori Yoshihiro、Fukuta Kentaro、Wada Hironori、Watanabe Masakatsu、Chen Zelin、Iwasaki Miki、Mishina Tappei、Matsuzaki Shin-ichiro S.、Yoshihara Daiki、Arakawa Jumpei、Kawakami Koichi、Toyoda Atsushi、Burgess Shawn M.、Noguchi Hideki、Furukawa Takahisa
- Journal Title
  
  Current Biology
  
  Volume: 30 Issue: 12 Pages: 2260-2274.e6
- DOI
  10.1016/j.cub.2020.04.034
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K22426, KAKENHI-PROJECT-19K16146, KAKENHI-PROJECT-18H02593, KAKENHI-PROJECT-19H03420, KAKENHI-PROJECT-18J00928, KAKENHI-PROJECT-17H03683, KAKENHI-PROJECT-16H06279
[Journal Article] Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria2019
- Author(s)
  Yu ZHENG, Ayana Saitou, Chiung-Mei Wang, Atsushi Toyoda, Yohei Minakuchi, Yuji Sekiguchi, Kenji Ueda, Hideaki Takano, Yasuteru Sakai, Keietsu Abe, Akira Yokota and Shuhei Yabe
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 10 Pages: 893-893
- DOI
  10.3389/fmicb.2019.00893
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18K05406
[Journal Article] A key metabolic gene for recurrent freshwater colonization and radiation in fishes2019
- Author(s)
  Ishikawa Asano, Kabeya Naoki, Ikeya Koki, Kakioka Ryo, Cech Jennifer N., Osada Naoki, Leal Miguel C., Inoue Jun, Kume Manabu, Toyoda Atsushi, Tezuka Ayumi, Nagano Atsushi J., Yamasaki Yo Y., Suzuki Yuto, Kokita Tomoyuki, Takahashi Hiroshi et al.
- Journal Title
  
  Science
  
  Volume: 364 Issue: 6443 Pages: 886-889
- DOI
  10.1126/science.aau5656
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K05686, KAKENHI-PROJECT-19K22329, KAKENHI-PROJECT-19K15908, KAKENHI-PLANNED-18H05511, KAKENHI-PROJECT-17H03629, KAKENHI-PROJECT-19H03269, KAKENHI-PROJECT-19H03277, KAKENHI-PROJECT-16H06279
[Journal Article] Tandem paired nicking promotes precise genome editing with scarce interference by p532019
- Author(s)
  Hyodo T, Rahman ML, Karnan S, Ito T, Toyoda A, Ota A, Wahiduzzaman M, Tsuzuki S, Okada Y, Hosokawa Y, Konishi H.
- Journal Title
  
  Cell Rep.
  
  Volume: 30 Issue: 4 Pages: 1195-1207
- DOI
  10.1016/j.celrep.2019.12.064
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K07539, KAKENHI-PROJECT-19K07969, KAKENHI-PROJECT-19K09292, KAKENHI-PROJECT-17K19465, KAKENHI-PROJECT-18K14703, KAKENHI-PROJECT-19H03576, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18K15470, KAKENHI-PROJECT-20K16611, KAKENHI-PROJECT-19J40240, KAKENHI-PROJECT-18K08342, KAKENHI-PROJECT-17K07263
[Journal Article] A SNP in a Steroidogenic Enzyme Is Associated with Phenotypic Sex in Seriola Fishes2019
- Author(s)
  T. Koyama, M. Nakamoto#, K. Morishima#, R. Yamashita#, T. Yamashita#, K. Sasaki, Y. Kuruma, N. Mizuno, M. Suzuki, K. Okada, R. Ieda, T. Uchino, S. Tasumi, S. Hosoya, S. Uno, J. Koyama, A. Toyoda, K. Kikuchi, T. Sakamoto
- Journal Title
  
  Current Biology
  
  Volume: 29 Issue: 11 Pages: 1901-1909
- DOI
  10.1016/j.cub.2019.04.069
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H05752, KAKENHI-PROJECT-15KT0103, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18H02277
[Journal Article] Tengunoibacter tsumagoiensis gen. nov., sp. nov., Dictyobacter kobayashii sp. nov., Dictyobacter alpinus sp. nov., and description of Dictyobacteraceae fam. nov. within the order Ktedonobacterales isolated from Tengu-no-mugimeshi, a soillike granular mass of micro-organisms, and emended descriptions of the genera Ktedonobacter and Dictyobacter2019
- Author(s)
  Chiung-mei Wang, Yu Zheng, Yasuteru Sakai, Atsushi Toyoda, Yohei Minakuchi, Keietsu Abe, Akira Yokota, Shuhei Yabe
- Journal Title
  
  International Journal of Systematic and Evolutionary Microbiology
  
  Volume: 69 Issue: 7 Pages: 1910-1918
- DOI
  10.1099/ijsem.0.003396
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K05406, KAKENHI-PROJECT-16H06279
[Journal Article] Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer2019
- Author(s)
  Yachida Shinichi、Mizutani Sayaka、Shiroma Hirotsugu、Shiba Satoshi、Nakajima Takeshi、Sakamoto Taku、Saito Yutaka、Fukuda Shinji、Shibata Tatsuhiro、Yamada Takuji
- Journal Title
  
  Nature Medicine
  
  Volume: 25 Issue: 6 Pages: 968-976
- DOI
  10.1038/s41591-019-0458-7
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K08416, KAKENHI-PROJECT-18K15800, KAKENHI-PUBLICLY-18H04805, KAKENHI-PROJECT-16H06373, KAKENHI-PROJECT-19J40249, KAKENHI-PROJECT-16H06279
[Journal Article] High-quality genome assembly of the silkworm, Bombyx mori.2019
- Author(s)
  Kawamoto, M., A. Jouraku, A. Toyoda, K. Yokoi, Y. Minakuchi, S. Katsuma, A. Fujiyama, T. Kiuchi, K. Yamamoto and T. Shimada
- Journal Title
  
  Insect Biochem Mol Biol
  
  Volume: 107 Pages: 53-62
- DOI
  10.1016/j.ibmb.2019.02.002
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Curing cytoplasmic male sterility via TALEN- mediated mitochondrial genome editing2019
- Author(s)
  Tomohiko Kazama 1*, Miki Okuno2, Yuta Watari3, Shungo Yanase3, Chie Koizuka4, Yu Tsuruta3, Hajime Sugaya3, Atsushi Toyoda 5, Takehiko Itoh2, Nobuhiro Tsutsumi3, Kinya Toriyama1, Nobuya Koizuka 4* and Shin-ichi Arimura 3,6*
- Journal Title
  
  Nature Plants
  
  Volume: 5 Issue: 7 Pages: 722-730
- DOI
  10.1038/s41477-019-0459-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K19202, KAKENHI-PUBLICLY-18H04831, KAKENHI-PROJECT-17H01457, KAKENHI-PROJECT-16H06279
[Journal Article] Evidence for sympatric speciation in a Wallacean ancient lake2019
- Author(s)
  Sutra Nobu、Kusumi Junko、Montenegro Javier、Kobayashi Hirozumi、Fujimoto Shingo、Masengi Kawilarang W. A.、Nagano Atsushi J.、Toyoda Atsushi、Matsunami Masatoshi、Kimura Ryosuke、Yamahira Kazunori
- Journal Title
  
  Evolution
  
  Volume: 73 Issue: 9 Pages: 1898-1915
- DOI
  10.1111/evo.13821
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K16232, KAKENHI-PROJECT-16H06279
[Journal Article] Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community2019
- Author(s)
  Hiraoka Satoshi、Okazaki Yusuke、Anda Mizue、Toyoda Atsushi、Nakano Shin-ichi、Iwasaki Wataru
- Journal Title
  
  Nature Communications
  
  Volume: 10 Issue: 1 Pages: 159-159
- DOI
  10.1038/s41467-018-08103-y
- NAID
  120006879468
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-17H05834, KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279
[Journal Article] Genotypical and serological diversity of Streptococcus suis and the S. suis-like bacterium, Streptococcus ruminantium, in ruminants.2019
- Author(s)
  Okura, M., Maruyama, F., Ota, A., Tanaka, T., Matoba, Y., Osawa, A., Sadaat, S.M., Osaki, M., Toyoda, A., Y. Ogura, Y., Hayashi, T.,Takamatsu, D.
- Journal Title
  
  Vet. Res.
  
  Volume: 50 Issue: 1 Pages: 94-94
- DOI
  10.1186/s13567-019-0708-1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H01782, KAKENHI-PROJECT-16H06279
[Journal Article] A unicellular relative of animals generates a layer of polarized cells by actomyosin-dependent cellularization2019
- Author(s)
  Dudin, O., Ondracka, A., Grau-Bove;, X., Haraldsen, A. A. B., Toyoda, A., Suga, H., Brate, J., and Ruiz-Trillo,
- Journal Title
  
  eLife
  
  Volume: 8
- DOI
  10.7554/elife.49801
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06792, KAKENHI-PROJECT-16H06279
[Journal Article] Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions.2019
- Author(s)
  Kajitani R, Yoshimura D, Okuno M, Minakuchi Y, Kagoshima H, Fujiyama A, Kubokawa K, Kohara Y, Toyoda A, Itoh T
- Journal Title
  
  Nat Commun
  
  Volume: - Issue: 1 Pages: 1702-1702
- DOI
  10.1038/s41467-019-09575-2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-INTERNATIONAL-15K21761, KAKENHI-ORGANIZER-15H05970, KAKENHI-PLANNED-15H05979, KAKENHI-PROJECT-16H04719, KAKENHI-PROJECT-17K01019, KAKENHI-PROJECT-16H06279
[Journal Article] Endoribonuclease ENDU-2 regulates multiple traits including cold tolerance via cell autonomous and nonautonomous controls in C. elegans2018
- Author(s)
  Ujisawa T., Ohta A., Ii T., Minakuchi Y., Toyoda A., Ii M., Kuhara A.
- Journal Title
  
  PNAS
  
  Volume: 115, 35 Issue: 35 Pages: 8823-8828
- DOI
  10.1073/pnas.1808634115
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06344, KAKENHI-PROJECT-17K19410, KAKENHI-INTERNATIONAL-15K21744, KAKENHI-PLANNED-15H05928, KAKENHI-PROJECT-18H02484, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16J00123
[Journal Article] Anisogamy evolved with a reduced sex-determining region in volvocine green algae2018
- Author(s)
  Takashi Hamaji, Hiroko Kawai-Toyooka, Haruka Uchimura, Masahiro Suzuki, Hideki Noguchi, Yohei Minakuchi, Atsushi Toyoda, Asao Fujiyama, Shin-ya Miyagishima, James G. Umen, Hisayoshi Nozaki
- Journal Title
  
  Communications Biology
  
  Volume: 1 Issue: 1 Pages: 17-17
- DOI
  10.1038/s42003-018-0019-5
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07510, KAKENHI-PROJECT-16H06734, KAKENHI-PROJECT-15K14580, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16H02518
[Journal Article] Molecular insights into the non-recombining nature of the spinach male-determining region.2018
- Author(s)
  Kudoh T., M. Takahashi, T. Osabe, A. Toyoda, H. Hirakawa, Y. Suzuki, N. Ohmido, Y. Onodera
- Journal Title
  
  Molecular Genetics and Genomics
  
  Volume: 293 Issue: 2 Pages: 557-568
- DOI
  10.1007/s00438-017-1405-2
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Functional divergence of a heterochromatin‐binding protein during stickleback speciation2018
- Author(s)
  Yoshida Kohta、Ishikawa Asano、Toyoda Atsushi、Shigenobu Shuji、Fujiyama Asao、Kitano Jun
- Journal Title
  
  Molecular Ecology
  
  Volume: 28 Issue: 6 Pages: 1563-1578
- DOI
  10.1111/mec.14841
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16K07469, KAKENHI-PROJECT-16H06279
[Journal Article] Molecular characterization of eye pigmentation-related ABC transporter genes in the ladybird beetle Harmonia axyridis reveals striking gene duplication of the white gene.2018
- Author(s)
  Tsuji, T., Gotoh, H., Morita, S. Hirata, J., Minakuchi, Y., Yaginuma, T., Toyoda, A. and Niimi, T.
- Journal Title
  
  Zool. Sci.
  
  Volume: 35 Issue: 3 Pages: 260-267
- DOI
  10.2108/zs170166
- NAID
  210000170345
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Genomic landscape at a late stage of stickleback speciation : high genomic divergence interspersed by small localized regions of introgression.2018
- Author(s)
  Ravinet, M., Yoshida, K., Shigenobu, S., Toyoda, A., Fujiyama, A., and Kitano, J.
- Journal Title
  
  PLoS Genetics
  
  Volume: 14 Issue: 5 Pages: e1007358-e1007358
- DOI
  10.1371/journal.pgen.1007358
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Genomic Characterization of β-Glucuronidase?Positive Escherichia coli O157:H7 Producing Stx2a2018
- Author(s)
  Ogura Yoshitoshi、Seto Kazuko、Morimoto Yo、Nakamura Keiji、Sato Mitsuhiko P.、Gotoh Yasuhiro、Itoh Takehiko、Toyoda Atsushi、Ohnishi Makoto、Hayashi Tetsuya
- Journal Title
  
  Emerging Infectious Diseases
  
  Volume: 24 Issue: 12 Pages: 2219-2227
- DOI
  10.3201/eid2412.180404
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17H04077, KAKENHI-PROJECT-17K17933, KAKENHI-PROJECT-16H06279
[Journal Article] Repeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetles2018
- Author(s)
  Ando Toshiya、Matsuda Takeshi、Goto Kumiko、Hara Kimiko、Ito Akinori、Hirata Junya、Yatomi Joichiro、Kajitani Rei、Okuno Miki、Yamaguchi Katsushi、Kobayashi Masaaki、Takano Tomoyuki、Minakuchi Yohei、Seki Masahide、Suzuki Yutaka、Yano Kentaro、Itoh Takehiko、Shigenobu Shuji、Toyoda Atsushi、Niimi Teruyuki
- Journal Title
  
  Nature Communications
  
  Volume: 9 Issue: 1 Pages: 3843-3843
- DOI
  10.1038/s41467-018-06116-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-17H05848, KAKENHI-PROJECT-16H06279
[Journal Article] The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization2018
- Author(s)
  Nishiyama, T., Sakayama, H., de Vries, J., Buschmann, H., Saint-Marcoux, D., et al. (他55名)
- Journal Title
  
  Cell
  
  Volume: 174 Issue: 2 Pages: 448-464
- DOI
  10.1016/j.cell.2018.06.033
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06382, KAKENHI-PROJECT-15H04413, KAKENHI-PROJECT-16H05764, KAKENHI-PROJECT-16H06279
[Journal Article] Control of Directionality of Chromatin Folding for the Inter- and Intra-Domain Contacts at the Tfap2c-Bmp7 Locus2018
- Author(s)
  Tsujimura T, Takase O, Yoshikawa M, Sano E, Hayashi M, Takato T, Toyoda A, Okano H, Hishikawa K.
- Journal Title
  
  Epigenetic & Chromatin
  
  Volume: 11 Issue: 1 Pages: 51-51
- DOI
  10.1186/s13072-018-0221-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K16072, KAKENHI-PROJECT-16H06279
[Journal Article] Exploring the Limits and Causes of Plastid Genome Expansion in Volvocine Green Algae2018
- Author(s)
  Gaouda Hager, Hamaji Takashi, Yamamoto Kayoko, Kawai-Toyooka Hiroko, Suzuki Masahiro, Noguchi Hideki, Minakuchi Yohei, Toyoda Atsushi, Fujiyama Asao, Nozaki Hisayoshi, Smith David Roy
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 10 Issue: 9 Pages: 2248-2254
- DOI
  10.1093/gbe/evy175
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07510, KAKENHI-PROJECT-18J11391, KAKENHI-PROJECT-16H06734, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16H02518
[Journal Article] Mining of the Uncharacterized Cytochrome P450 Genes Involved in Alkaloid Biosynthesis in California Poppy Using a Draft Genome Sequence2018
- Author(s)
  Hori Kentaro、Yamada Yasuyuki、Purwanto Ratmoyo、Minakuchi Yohei、Toyoda Atsushi、Hirakawa Hideki、Sato Fumihiko
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: 59 Issue: 2 Pages: 222-233
- DOI
  10.1093/pcp/pcx210
- NAID
  120006384165
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26221201, KAKENHI-PROJECT-16H06279
[Journal Article] Constitutive centromere-associated network controls centromere drift in vertebrate cells2017
- Author(s)
  Hori, T. Kagawa, N. Toyoda, A. Fujiyama, A. Misu, S. Monma, N. Makino, F. Ikeo, K. Fukagawa, T.
- Journal Title
  
  The Journal of cell biology
  
  Volume: 1 Issue: 1 Pages: 101-113
- DOI
  10.1083/jcb.201605001
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-15H01477, KAKENHI-PLANNED-15H05972, KAKENHI-PLANNED-25116002, KAKENHI-PROJECT-25221106, KAKENHI-PROJECT-26440190, KAKENHI-PROJECT-16H06279
[Journal Article] Complete Genome Sequence of Super Biofilm-Elaborating Staphylococcus aureus Isolated in Japan.2017
- Author(s)
  Yu L, Hisatsune J, Hirakawa H, Mizumachi E, Toyoda A, Yahara K, Sugai M.
- Journal Title
  
  Genome Announc.
  
  Volume: 5 Issue: 41
- DOI
  10.1128/genomea.01043-17
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Multiple common and rare variants of ABCG2 cause gout2017
- Author(s)
  Higashino Toshihide、Takada Tappei、Nakaoka Hirofumi、Toyoda Yu、Stiburkova Blanka、Miyata Hiroshi、Ikebuchi Yuki、Nakashima Hiroshi、Shimizu Seiko、Kawaguchi Makoto、Sakiyama Masayuki、Nakayama Akiyoshi、Akashi Airi、Tanahashi Yuki、Kawamura Yusuke、Nakamura Takahiro、Wakai Kenji、Hosomichi Kazuyoshi 他
- Journal Title
  
  RMD Open
  
  Volume: 3 Issue: 2 Pages: e000464-e000464
- DOI
  10.1136/rmdopen-2017-000464
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K19804, KAKENHI-PROJECT-17K19864, KAKENHI-PROJECT-15H02373, KAKENHI-PROJECT-16H01808, KAKENHI-PROJECT-15H04315, KAKENHI-PROJECT-15H05610, KAKENHI-PROJECT-16J01063, KAKENHI-PROJECT-15K05577, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17H04128
[Journal Article] Complete genome sequence and expression profile of the commercial lytic enzyme producer Lysobacter enzymogenes M497-12017
- Author(s)
  H Takami, A Toyoda, I Uchiyama, T Itoh, Y Takaki, W.Arai, S Nishi, M Kawai, K Shin-ya, H Ikeda
- Journal Title
  
  DNA Research
  
  Volume: 24 Pages: 169-177
- DOI
  10.1093/dnares/dsw055
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-15H05979, KAKENHI-PLANNED-16H06447, KAKENHI-PROJECT-15KT0039
[Journal Article] The complete mitogenome and phylogenetic analysis of Japanese firefly ‘Genji Botaru’ Luciola cruciata (Coleoptera : Lampyridae)2017
- Author(s)
  Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
- Journal Title
  
  Mitochondrial DNA Part B
  
  Volume: 2 Issue: 2 Pages: 522-523
- DOI
  10.1080/23802359.2017.1365641
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] The complete mitochondrial genome sequence and phylogenetic analysis of Luciola lateralis, one of the most famous firefly in Japan (Coleoptera : Lampyridae)2017
- Author(s)
  Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
- Journal Title
  
  Mitochondrial DNA Part B
  
  Volume: 2 Issue: 2 Pages: 546-547
- DOI
  10.1080/23802359.2017.1365640
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Multiple Independent Changes in Mitochondrial Genome Conformation in Chlamydomonadalean Algae.2017
- Author(s)
  Takashi Hamaji, Hiroko Kawai Toyooka, Atsushi Toyoda, Yohei Minakuchi, Masahiro Suzuki, Asao Fujiyama, Hisayoshi Nozaki and David Roy Smith.
- Journal Title
  
  Genome Biol Evol.
  
  Volume: 9 Issue: 4 Pages: 993-999
- DOI
  10.1093/gbe/evx060
- NAID
  120006358595
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17K07510, KAKENHI-PROJECT-16H06734
[Journal Article] Different contributions of local- and distant-regulatory changes to transcriptome divergence between stickleback ecotypes.2017
- Author(s)
  Ishikawa A, Kusakabe M, Yoshida K, Ravinet M, MakinoT, Toyoda A, Fujiyama A, Kitano J.
- Journal Title
  
  Evolution
  
  Volume: 71 Issue: 3 Pages: 565-581
- DOI
  10.1111/evo.13175
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K07125, KAKENHI-PROJECT-16K07469, KAKENHI-PROJECT-16H06279
[Journal Article] An acid-tolerant ammonia-oxidizing γ-proteobacterium from soil2017
- Author(s)
  3.Masahito Hayatsu, Kanako Tago, Ikuo Uchiyama, Atsushi Toyoda, Yong Wang, Yumi Shimomura,Takashi Okubo, Futoshi Kurisu, Yuhei Hirono, Kunihiko Nonaka, Hiroko Akiyama, Takehiko Itoh, Hideto Takami
- Journal Title
  
  ISME Journal
  
  Volume: - Issue: 5 Pages: 1130-114
- DOI
  10.1038/ismej.2016.191
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-26292184, KAKENHI-PROJECT-26310315, KAKENHI-PROJECT-15KT0039, KAKENHI-PROJECT-17H00793, KAKENHI-PROJECT-16K14874
[Journal Article] Genomic structure and evolution of the mating type locus in the green seaweed Ulva partita2017
- Author(s)
  Yamazaki Tomokazu、Ichihara Kensuke、Suzuki Ryogo、Oshima Kenshiro、Miyamura Shinichi、Kuwano Kazuyoshi、Toyoda Atsushi、Suzuki Yutaka、Sugano Sumio、Hattori Masahira、Kawano Shigeyuki
- Journal Title
  
  Scientific Reports
  
  Volume: 7 Issue: 1 Pages: 11679-11679
- DOI
  10.1038/s41598-017-11677-0
- NAID
  120007134814
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K14579, KAKENHI-PROJECT-17H03705, KAKENHI-PROJECT-16H06279
[Journal Article] CRISPR/Cas9-based knockouts reveal that CpRLP1 is a negative regulator of the sex pheromone PR-IP in the Closterium peracerosum-strigosum-littorale complex.2017
- Author(s)
  Kanda, N., Ichikawa, M., Ono, A., Toyoda, A., Fujiyama, A., Abe, J., Tsuchikane, Y., Nishiyama, T., Sekimoto, H.
- Journal Title
  
  Sci. Rep.
  
  Volume: 7 Issue: 1 Pages: 17873-17873
- DOI
  10.1038/s41598-017-18251-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H05237, KAKENHI-PROJECT-26650147, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-16H04836
[Journal Article] Genome sequence and analysis of the Japanese morning glory Ipomoea nil.2016
- Author(s)
  Hoshino A, Jayakumar V, Nitasaka E, Toyoda A, Noguchi H, Itoh T, Shin T, Minakuchi Y, Koda Y, Nagano AJ, Yasugi M, Honjo MN, Kudoh H, et al.
- Journal Title
  
  Nature Communications
  
  Volume: 7 Issue: 1 Pages: 132395-132395
- DOI
  10.1038/ncomms13295
- NAID
  120005997914
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26221106, KAKENHI-PROJECT-16H04719, KAKENHI-PROJECT-15K07118, KAKENHI-PROJECT-16H06279
[Journal Article] The Gonium pectorale genome demonstrates cooption of cell cycle regulation during the evolution of multicellularity2016
- Author(s)
  Erik R. Hanschen, Tara N. Marriage, Patrick J. Ferris, Takashi Hamaji, Atsushi Toyoda, Asao Fujiyama, Rafik Neme, Hideki Noguchi, Yohei Minakuchi, Masahiro Suzuki, Hiroko Kawai-Toyooka, David R. Smith, Halle Sparks, Jaden Anderson, Robert Bakaric, Victor Luria, Amir Karger, Marc Kirschner, et al.
- Journal Title
  
  Nature Communications
  
  Volume: 7 Issue: 1 Pages: 11370-11370
- DOI
  10.1038/ncomms11370
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-25891009, KAKENHI-PROJECT-24247042
[Journal Article] Novel mitochondria-targeted heat-soluble proteins identified in the anhydrobiotic tardigrade improve osmotic tolerance of human cells.2015
- Author(s)
  Tanaka, S., Tanaka, J., Miwa Y., Horikawa, D.D., Katayama, T., Arakawa, K., Toyoda, A., Kubo, T., Kunieda, T.
- Journal Title
  
  PLOS ONE
  
  Volume: 10 Issue: 2 Pages: e0118272-e0118272
- DOI
  10.1371/journal.pone.0118272
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-13J10474, KAKENHI-PROJECT-25281016, KAKENHI-PUBLICLY-26102712, KAKENHI-PROJECT-26660288, KAKENHI-PROJECT-221S0002, KAKENHI-PUBLICLY-25113702
[Journal Article] Complete genome sequence of a phenanthrene degrader, Mycobacterium sp. strain EPa45 (NBRC 110737), isolated from a phenanthrene-degrading consortium.2015
- Author(s)
  Kato H, Ogawa N, Ohtsubo Y, Oshima K, Toyoda A, Mori H, Nagata Y, Kurokawa K, Hattori M, Fujiyama A, Tsuda M
- Journal Title
  
  Genome Announcements
  
  Volume: 3 Issue: 4
- DOI
  10.1128/genomea.00782-15
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-26660054, KAKENHI-PROJECT-25292043, KAKENHI-PROJECT-25292206, KAKENHI-PROJECT-15H04471
[Journal Article] Resequencing of the common marmoset genome improves genome assemblies and gene-coding sequence analysis2015
- Author(s)
  Sato, K., Kuroki, Y., Kumita, W., Fujiyama, A., Toyoda, A., Kawai, J., Iriki, A., Sasaki, E., Okano, H., Sakakibara, Y.
- Journal Title
  
  Scientific Reports
  
  Volume: 5 Issue: 1 Pages: 16894-16894
- DOI
  10.1038/srep16894
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-25330348, KAKENHI-PROJECT-221S0002
[Journal Article] Comparative genome and transcriptome analyses of the social amoeba Acytostelium subglobosum that accomplishes multicellular development without germ-soma differentiation.2015
- Author(s)
  Urushihara H, Kuwayama H, Fukuhara K, Itoh T, Kagoshima H, Shin-I T, Toyoda A, Ohishi K, Taniguchi T, Noguchi H, Kuroki Y, Hata T, Uchi K, Mohri K, King JS, Insall RH, Kohara Y, Fujiyama A.
- Journal Title
  
  BMC Genomics
  
  Volume: 16 Issue: 1 Pages: 80-80
- DOI
  10.1186/s12864-015-1278-x
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Domestication and cereal feeding developed domestic pig-type intestinal microbiota in animals of suidae.2015
- Author(s)
  Ushida K, Tsuchida S, Ogura Y, Toyoda A, Maruyama F.
- Journal Title
  
  Anim Sci J.
  
  Volume: Aug 27 Issue: 6 Pages: 12492-12492
- DOI
  10.1111/asj.12492
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] A Colony Multiplex Quantitative PCR-Based 3S3DBC Method and Variations of It for Screening DNA Libraries2015
- Author(s)
  Yang An, Atsushi Toyoda, Chen Zhao, Asao Fujiyama, and Kiyokazu Agata
- Journal Title
  
  PLoS ONE
  
  Volume: 10 Issue: 2 Pages: e0116997-e0116997
- DOI
  10.1371/journal.pone.0116997
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-13J01078, KAKENHI-ORGANIZER-22124001, KAKENHI-PROJECT-221S0002
[Journal Article] A Polymorphism in CCR1/CCR3 Is Associated with Narcolepsy2015
- Author(s)
  Toyoda H, Miyagawa T, Koike A, Kanbayashi T, Kawamura Y, Otowa T, Miyashita A,　Kashiwase K, Khor SS, Yamasaki M, Kuwano R, Sasaki T, Ishigooka J, Kuroda K, Kume K, Chiba S, Yamada N, Okawa M, Hirata K, Mizuki N, Uchimura N, Shimizu T, Inoue Y, Honda Y, Mishima K, Honda M, Tokunaga K
- Journal Title
  
  Brain Behav. Immun.
  
  Volume: in press
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Time-series metagenomic analysis reveals robustness of soil microbiome against chemical disturbance.2015
- Author(s)
  Kato H, Mori H, Maruyama F, Toyoda A, Oshima K, Endo R, Fuchu G, Miyakoshi M, Dozono A, Ohtsubo Y, Nagata Y, Hattori M, Fujiyama A, Kurokawa K, Tsuda M
- Journal Title
  
  DNA Research
  
  Volume: 22 Issue: 6 Pages: 413-424
- DOI
  10.1093/dnares/dsv023
- NAID
  120005850199
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-26660054, KAKENHI-PROJECT-25292043, KAKENHI-PROJECT-25292206, KAKENHI-PROJECT-15H04471
[Journal Article] Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice2015
- Author(s)
  Arikuni Uchimura, Mayumi Higuchi, Yohei Minakuchi, Mizuki Ohno, Atsushi Toyoda, Asao Fujiyama, Ikuo Miura, Shigeharu Wakana, Jo Nishino, Takeshi Yagi
- Journal Title
  
  Genome Research
  
  Volume: 25 Issue: 8 Pages: 1125-1134
- DOI
  10.1101/gr.186148.114
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K12205, KAKENHI-PROJECT-15K14368, KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-26281022
[Journal Article] A biochemical landscape of A-to-I RNA editing in the human brain transcriptome2014
- Author(s)
  Sakurai, M., Ueda, H., Yano, T., Okada, S., Terajima, H., Mitsuyama, T., Toyoda, A., Fujiyama, A., Kawabata, H. and Suzuki, T.
- Journal Title
  
  Genome Res
  
  Volume: 24 Issue: 3 Pages: 522-534
- DOI
  10.1101/gr.162537.113
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-22227006, KAKENHI-PROJECT-25620125, KAKENHI-PROJECT-221S0002
[Journal Article] Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads2014
- Author(s)
  Kamada, M., Hase, S., Sato, K., Toyoda, A., Fujiyama, A., Sakakibara, Y.
- Journal Title
  
  PLOS ONE
  
  Volume: 9 Issue: 10 Pages: e109999-e109999
- DOI
  10.1371/journal.pone.0109999
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23241066, KAKENHI-PROJECT-25330348, KAKENHI-PROJECT-221S0002
[Journal Article] An evolutionarily conserved protein CHORD regulates scaling of dendritic arbors with body size.2014
- Author(s)
  Kohei Shimono, Kazuto Fujishima, Takafumi Nomura, Masayoshi Ohashi, Tadao Usui, Mineko Kengaku, Atsushi Toyoda, and Tadashi Uemura.
- Journal Title
  
  Scientific Reports
  
  Volume: 4 Issue: 1 Pages: 4415-4415
- DOI
  10.1038/srep04415
- NAID
  120005399036
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-22115006, KAKENHI-PROJECT-221S0003, KAKENHI-PUBLICLY-24111525, KAKENHI-PROJECT-24500410, KAKENHI-PROJECT-221S0002
[Journal Article] Genome-wide analysis of CNV (copy number variation) and their associations with narcolepsy in a Japanese population2014
- Author(s)
  Yamasaki M, Miyagawa T, Toyoda H, Khor SS, Koike A, Nitta A, Akiyama K, Sasaki T, Honda M, and Tokunaga K
- Journal Title
  
  J. Hum. Genet.
  
  Volume: 印刷中 Issue: 5 Pages: 235-240
- DOI
  10.1038/jhg.2014.13
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22133008, KAKENHI-PROJECT-23689022, KAKENHI-PROJECT-24890047, KAKENHI-PROJECT-26870117, KAKENHI-PROJECT-221S0002
[Journal Article] HAP2/GCS1 Is Involved in the Sexual Reproduction System of the Marine Macroalga Ulva compressa (Ulvales, Chlorophyta)2014
- Author(s)
 Yamazaki, T., Endo, M., Ito, K., Suzuki, R., Ota, S., Kuwano, K., Miyamura, S., Toyoda, A. and Kawano, S.
- Journal Title
 
 CYTOLOGIA
 
 Volume: 79 Issue: 4 Pages: 575-584
- DOI
 10.1508/cytologia.79.575
- NAID
 130004801645
- ISSN
 0011-4545, 1348-7019
- Language
 English
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-24657046, KAKENHI-PROJECT-25291070, KAKENHI-PROJECT-25840135, KAKENHI-PROJECT-221S0002
[Journal Article] Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads.2014
- Author(s)
  R. Kajitani, K. Toshimoto, H. Noguchi, A. Toyoda, Y. Ogura, M. Okuno, M. Yabana, M. Harada, E. Nagayasu, H. Maruyama, Y. Kohara, A. Fujiyama, T. Hayashi and T.Itoh
- Journal Title
  
  Genome Research,
  
  Volume: 24 Issue: 8 Pages: 1384-1384
- DOI
  10.1101/gr.170720.113
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-ORGANIZER-22125001, KAKENHI-PLANNED-22125008, KAKENHI-PROJECT-24310142, KAKENHI-PUBLICLY-25125718, KAKENHI-PROJECT-25250024, KAKENHI-PROJECT-25460542, KAKENHI-PROJECT-221S0002
[Journal Article] A Transformation System Using rbcS N-Terminal Region Fused with GFP Demonstrates Pyrenoid Targeting of the Small Subunit of RubisCO in Ulva compressa2014
- Author(s)
 Suzuki, R., Yamazaki, T., Toyoda, A. and Kawano, S.:
- Journal Title
 
 CYTOLOGIA
 
 Volume: 79 Issue: 4 Pages: 427-428
- DOI
 10.1508/cytologia.79.427
- NAID
 130004801646
- ISSN
 0011-4545, 1348-7019
- Language
 English
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-24657046, KAKENHI-PROJECT-25291070, KAKENHI-PROJECT-221S0002
[Journal Article] Sex-specific Post-translational Regulation of the Gamete Fusogen GCS1 in the Isogamous Volvocine Alga Gonium pectorale.2014
- Author(s)
  Kawai-Toyooka H, Mori T, Hamaji T, Suzuki M, Olson BJ, Uemura T, Ueda T, Nakano A, Toyoda A, Fujiyama A, Nozaki H.
- Journal Title
  
  Eukaryot Cell.
  
  Volume: In Press, Mar 14.
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Mutations in ERBB4 That Disrupt The NRG-ErbB4 Pathway Cause Autosomal Dominant Familial ALS Type 192014
- Author(s)
  Yuji Takahashi, Yoko Fukuda, Jun Yoshimura, Atsushi Toyoda, Kari Kurppa, Hiroyoko Moritoyo, Veronique Belzil, Klaus Elenius, Guy Rouleau, Asao Fujiyama, Shinichi Morishita, Jun Goto, Shoji Tsuji
- Journal Title
  
  Neurology
  
  Volume: 82
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Sex-specific post-translational regulation of the gamete fusogen GCSI in the isogamous volvocine alga Gonium pectorale.2014
- Author(s)
  Kawai-Toyooka H, Mori T, Hamaji T, Suzuki M, Olson BJ, Uemura T, Ueda T, Nakano A, Toyoda A, Fujiyama A, Nozaki H
- Journal Title
  
  EUkaryotic Cell
  
  Volume: (in press) Issue: 5 Pages: 648-656
- DOI
  10.1128/ec.00330-13
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-11J05499, KAKENHI-PLANNED-21112008, KAKENHI-PUBLICLY-24112707, KAKENHI-PLANNED-24114003, KAKENHI-PROJECT-24247042, KAKENHI-PROJECT-24370019, KAKENHI-PROJECT-24657045, KAKENHI-PROJECT-24770062, KAKENHI-PUBLICLY-25120706, KAKENHI-PROJECT-25304012, KAKENHI-PROJECT-25840100, KAKENHI-PROJECT-25891009, KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-25221103
[Journal Article] Comparison of genomic and epigenomic expression in monozygotic twins discordant for Rett syndrome2013
- Author(s)
  Miyake K,Yang C,Minakuchi Y, OhoriK,Soutome M,HirasawaT,KazukiY, Adachi N,Suzuki S, Itoh M, Goto Y, Andoh T, KurosawaH, OshimuraM, SasakiM, Toyoda A, Kubota T
- Journal Title
  
  PLoS ONE
  
  Volume: (印刷中)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23659519
[Journal Article] Lineage specifice xpansion of V2R receptor (OlfC) genes in cichlids may contribute to diversification in amino acid detection2013
- Author(s)
  Nikaido M, Suzuki H, Toyoda A, FujiyamaA, Hagino-Yamagishi K, Kocher TD, Carleton KL, Okada N
- Journal Title
  
  Genome Biol
  
  Volume: Evol.5 Issue: 4 Pages: 711-722
- DOI
  10.1093/gbe/evt041
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21227002, KAKENHI-PUBLICLY-25125719, KAKENHI-PUBLICLY-25128703, KAKENHI-PROJECT-221S0002
[Journal Article] Comparison of Genomic and Epigenomic Expression in Monozygotic Twins Discordant for Rett Syndrome2013
- Author(s)
  Miyake K, Yang C, Minakuchi Y, Ohori K, Soutome M, Hirasawa T, Kazuki Y, Adachi N, Suzuki S, Itoh M, Goto YI, Andoh T, Kurosawa H, Oshimura M, Sasaki M, Toyoda A, Kubota T.
- Journal Title
  
  PLoS One
  
  Volume: 8(6)
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22129003
[Journal Article] Comparison of Genomic and Epigenomic Expression in Monozygotic Twins Discordant for Rett Syndrome.2013
- Author(s)
  Miyake K, Yang C, Minakuchi Y, Ohori K, Soutome M, Hirasawa T, Kazuki Y, Adachi N, Suzuki S, Itoh M, Goto YI, Andoh T, Kurosawa H, Oshimura M, Sasaki M, Toyoda A, Kubota T.
- Journal Title
  
  PLoS One.
  
  Volume: 8(6)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Design and experimental application of a novel non-degenerate universal primer set that amplifies prokaryotic 16S rRNA genes with a low possibility to amplify eukaryotic rRNA genes2013
- Author(s)
  Mori H, Maruyama F, Kato H, Toyoda A, Dozono A, Ohtsubo Y, Nagata Y, Fujiyama A, Tsuda M Kurokawa K
- Journal Title
  
  DNA Res
  
  Volume: 21 Issue: 2 Pages: 217-227
- DOI
  10.1093/dnares/dst052
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23310131, KAKENHI-PROJECT-23651183, KAKENHI-PROJECT-24658068, KAKENHI-PROJECT-24770015, KAKENHI-PROJECT-25292043, KAKENHI-PROJECT-25292206, KAKENHI-PROJECT-25305013, KAKENHI-PROJECT-221S0002
[Journal Article] Comparison of genomic and epigenomic expression in monozygotic twins discordant for Rett syndrome2013
- Author(s)
  Miyake K, Yang C, Minakuchi Y, Ohori K, Soutome M, Hirasawa T, Kazuki Y, Adachi N, Suzuki S, Itoh M, Goto Y, Andoh T, Kurosawa H, Akamatsu W, Oyama M, Okano H, Oshimura M, Sasaki M, Toyoda A, Kubota T
- Journal Title
  
  PLoS ONE
  
  Volume: 8 Issue: 6 Pages: e66729-e66729
- DOI
  10.1371/journal.pone.0066729
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23240062, KAKENHI-PROJECT-23390272, KAKENHI-PROJECT-23591491, KAKENHI-PROJECT-25670473, KAKENHI-PROJECT-25860852
[Journal Article] Draft assembly of the Symbiodinium minutum nuclear genome reveals dinoflagellate gene structure2013
- Author(s)
  Shoguchi1, E., Shinzato, C., Kawashima, T., Gyoja, F., et al.
- Journal Title
  
  Current Biology
  
  Volume: 23 Issue: 15 Pages: 1399-1408
- DOI
  10.1016/j.cub.2013.05.062
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24241071, KAKENHI-PUBLICLY-25128712, KAKENHI-PROJECT-221S0002
[Journal Article] ERBB4 Mutations that Disrupt the Neuregulin-ErbB4 Pathway Cause Amyotrophic Lateral Sclerosis Type 19.2013
- Author(s)
  Takahashi Y, Fukuda Y, Yoshimura J, Toyoda A, (33名省略）, Morishita S, Goto J and Tsuji S.
- Journal Title
  
  Am J Hum Genet
  
  Volume: 93 Issue: 5 Pages: 900-905
- DOI
  10.1016/j.ajhg.2013.09.008
- Peer Reviewed
- Data Source
  KAKENHI-ORGANIZER-22129001, KAKENHI-PLANNED-22129002, KAKENHI-PLANNED-22129003, KAKENHI-PLANNED-22129008, KAKENHI-PUBLICLY-25110714, KAKENHI-PROJECT-25253065, KAKENHI-PROJECT-25461277, KAKENHI-PROJECT-25860700, KAKENHI-PROJECT-221S0002
[Journal Article] Mutations in cell elongation genes mreB, mrdA and mrdB suppress the shape defect of RodZ-deficient cells2013
- Author(s)
  Shiomi, D
- Journal Title
  
  Molecular Microbiology
  
  Volume: 87 Issue: 5 Pages: 1029-1044
- DOI
  10.1111/mmi.12148
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370067, KAKENHI-PROJECT-24770191, KAKENHI-PLANNED-22129003
[Journal Article] Multi-decadal survival of an Antarctic nematode, Plectus murrayi, in a -20°C stored moss sample.2012
- Author(s)
  Kagoshima H, Kito K, Aizu T, Shin-i T, Kanda H, Kobayashi S, Toyoda A, Fujiyama A, Kohara Y, Convey P, Niki H.
- Journal Title
  
  Cryo Letters
  
  Volume: 33(4) Pages: 280-288
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23510239
[Journal Article] Genome analysis of the domestic dog(korean jindo) by massively parallel sequencing2012
- Author(s)
  Kim RN, Kim DS, Choi SH, Yoon BH, Kang A, Nam SH, Kim DW, Kim JJ, Ha JH, Toyoda A, Fujiyama A, Kim A, Kim MY, Park KH, Lee KS, Park HS.
- Journal Title
  
  DNA Res
  
  Volume: 19(3) Pages: 275-288
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310126
[Journal Article] Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment2012
- Author(s)
  Izutsu M, Zhou J, Sugiyama Y, Nishimura O, Aizu T, Toyoda A, Fujiyama A, Agata K, Fuse N.
- Journal Title
  
  PLoS One
  
  Volume: 7(3)
- NAID
  120003892186
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310126
[Journal Article] Centromere-targeted de novo ntegrations of an LTR retrotransposon of Arabidopsis lyrata2012
- Author(s)
  Tsukahara S, Kawabe A, Kobayashi A, Ito T, Aizu T, Shin-i T, Toyoda A, Fujiyama A, Tarutani Y, Kakutani T.
- Journal Title
  
  Genes Dev
  
  Volume: 26(7) Pages: 705-713
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310126
[Journal Article] Multi-decadal survival of an Antarctic nematode, Plectus murrayi, in a -20℃ stored moss sample2012
- Author(s)
  Kagoshima H, Kito K, Aizu T, Shin-i T, Kanda H, Kobayashi S, Toyoda A, Fujiyama A, Kohara Y, Convey P, Niki H
- Journal Title
  
  Cryo Letters
  
  Volume: 33(4) Pages: 280-288
- URL
  http://www.cryoletters.org/Abstracts/vol_33_4_2012.htm#280
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23510239
[Journal Article] Genome analysis of the domestic dog (Korean Jindo) by massively parallel sequencing2012
- Author(s)
  Kim RN, Kim DS, Choi SH, Yoon BH, Kang A, Nam SH, Kim DW, Kim JJ, Ha JH, Toyoda A, Fujiyama A, Kim A, Kim MY, Park KH, Lee KS, Park HS.
- Journal Title
  
  DNA Res.
  
  Volume: 19 Issue: 3 Pages: 275-287
- DOI
  10.1093/dnares/dss011
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22129003
[Journal Article] 1000ゲノムプロジェクトの目標と展開2011
- Author(s)
  水口洋平・豊田敦
- Journal Title
  
  医学のあゆみ
  
  Volume: 236 Pages: 616-622
- Data Source
  KAKENHI-PROJECT-21310126
[Journal Article] 1000ゲノムプロジェクトの目標と展開2011
- Author(s)
  水口洋平・豊田敦
- Journal Title
  
  医学のあゆみ
  
  Volume: 236 Pages: 616-622
- Data Source
  KAKENHI-PLANNED-22129003
[Journal Article] Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event2011
- Author(s)
  Ono R., et.al.
- Journal Title
  
  DNA Research
  
  Volume: 18(4) Issue: 4 Pages: 211-219
- DOI
  10.1093/dnares/dsr012
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22770004, KAKENHI-PUBLICLY-23013010, KAKENHI-PROJECT-23221010, KAKENHI-PROJECT-221S0002
[Journal Article] Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data2010
- Author(s)
  Nishito Y, Osana Y, Hachiya T, Popendorf K, Toyoda A, Fujiyama A, Itaya M, Sakakibara Y.
- Journal Title
  
  BMC Genomics
  
  Volume: 11 Pages: 243-243
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310126
[Journal Article] The identification and functional implications of human-specific2009
- Author(s)
  Goto H, Watanabe K, Araragi N, Kageyama R, Tanaka K, Kuroki Y, Toyoda A, Hattori M, Sakaki Y, Fujiyama A, Fukumaki Y, Shibata H.
- Journal Title
  
  BMC Evol Biol. 9
  
  Pages: 224-224
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] ゲノム再配列決定をいかに行なうか2009
- Author(s)
  豊田敦
- Journal Title
  
  蛋白質核酸酵素 54
  
  Pages: 1271-1275
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] 次世代シークエンサーによるゲノム解読と今後の動向2009
- Author(s)
  豊田敦
- Journal Title
  
  実験医学 27
  
  Pages: 1929-1935
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] Genome of an endosymbiont coupling N2 fixation to cellulolysis within protist cells in termite gut2008
- Author(s)
  Hongoh Y, et.al., including A. Toyoda
- Journal Title
  
  Science 322
  
  Pages: 1108-1109
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants2008
- Author(s)
  Stefan A. Rensing, Daniel Lang, Andreas D. Zimmer, Astrid Terry, Asaf Salamov, Harris Shapiro, Tomoaki Nishiyama, Pierre-Francois Perroud, Erika Lindquist, Yasuko Kamisugi, Takako Tanahashi,, Keiko Sakakibara, Tomomichi Fujita, Kazuko Oishi, Tadasu Shin-I, Yoko Kuroki, Atsushi Toyoda, Yutaka Suzuki, Shin-ichi Hashimoto, Kazuo Yamaguchi,, Sumio Sugano, Yuji Kohara,, Asao Fujiyama, et al.:
- Journal Title
  
  Science 319
  
  Pages: 64-69
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] Large-scale microfabricated channel plates for high-throughput, fully automated DNA sequen cing2008
- Author(s)
  Kumagai H, et.al, including A. Toyoda
- Journal Title
  
  Electrophoresi 23
  
  Pages: 4723-4732
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] BAC library construction and BAC end sequencing of five Drosophila species : the comparative map with the D. melanogaster genome2008
- Author(s)
  K. Murakami, et.al., including A. Fujiyama, A. Toyoda and Y. Kuroki
- Journal Title
  
  Genes & Genetic Systems 83
  
  Pages: 245-256
- NAID
  10024396228
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] Genome of an endosymbiont coupling N2 fixation to cellulolysis within protist cells in termite gut2008
- Author(s)
  Hongoh Y, et.al., including A. Toyoda
- Journal Title
  
  Science 322
  
  Pages: 1108-1109
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] The genomeof the moss Physomitrella patens reveals evolutionary insights into the conquest of land by plants2008
- Author(s)
  Stefan A. Rensing, Daniel Lang, Andreas D. Zimmer, Astrid Terry, Asaf Salamov, Harris Shapiro, Tomoaki Nishiyama, Pierre-Francois Perroud, Erika Lindquist, Yasuko Kamisugi, Takako Tanahashi,, Keiko Sakakibara, Tomomichi Fujita, Kazuko Oishi, Tadasu Shin-I, Yoko Kuroki, Atsushi Toyoda, Yutaka Suzuki, Shin-ichi Hashimoto, Kazuo Yamaguchi,, Sumio Sugano, Yuji Kohara,, Asao Fujiyama, et al
- Journal Title
  
  Science 319
  
  Pages: 64-69
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] The amphioxus genome and the evolution of the chordate karyotype2008
- Author(s)
  Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Benito-Gutierrez EL, Dubchak I, Garcia-Fernandez J, Gibson-Brown JJ, Grigoriev IV, Horton AC, de Jong PJ, Jurka J, Kapitonov VV, Kohara Y, Kuroki Y, Lindquist E, Lucas S, Osoegawa K, Pennacchio LA, Salamov AA, Satou Y, Sauka-Spengler T, Schmutz J, Shin-I T, Toyoda A, Bronner-Fraser M, Fujiyama A, Holland LZ, Holland PW, Satoh N, Rokhsar DS
- Journal Title
  
  Nature 453
  
  Pages: 1064-1071
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] The genome size evolution of medaka (Oryzias latipes) and fugu (Takifugu rubripes).2008
- Author(s)
  Stefan A., et al. including Fujiyama and Toyoda
- Journal Title
  
  Science 319
  
  Pages: 64-69
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell2008
- Author(s)
  Hongoh Y, et.al., including A. Toyoda
- Journal Title
  
  Proc Natl Acad Sci U S A 105
  
  Pages: 5555-5560
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell2008
- Author(s)
  Hongoh Y, et.al., including A. Toyoda
- Journal Title
  
  Proc Natl Acad Sci U S A 105
  
  Pages: 5555-5560
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] UTGB/medaka : genomic resource database for medaka biology.2008
- Author(s)
  Ahsan B., et al. including Fujiyama and Toyoda
- Journal Title
  
  Nucleic Acids Research 36
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] Large-scale microfabricated channel plates for high-throughput, fully automated DNA sequencing2008
- Author(s)
  Kumagai H, et.al., including A. Toyoda
- Journal Title
  
  Electrophoresi 23
  
  Pages: 4723-4732
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] The amphioxus genome and the evolution of the chordate karyotype2008
- Author(s)
  Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Benito-Gutierrez EL, Dubchak I, Garcia-Fernandez J, Gibson-Brown JJ, Grigoriev IV, Horton AC, de Jong PJ, Jurka J, Kapitonov VV, Kohara Y, Kuroki Y, Lindquist E, Lucas S, Osoegawa K, Pennacchio LA, Salamov AA, Satou Y, Sauka-Spengler T, Schmutz J, Shin-I T, Toyoda A, Bronner-Fraser M, Fujiyama A, Holland LZ, Holland PW, Satoh N, Rokhsar DS
- Journal Title
  
  Nature 453
  
  Pages: 1064-1071
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018030
[Journal Article] The medaka draft geome ad insightsinto vertebrate genome evolution2007
- Author(s)
  Masahiro Kasahara, Kiyoshi Naruse, Shin Sasaki, Yoichiro Nakatani, Wei Qu, Budrul Ahsan, Tomoyuki Yamada, Yukinobu Nagayasu, Koichiro Doi, Yasuhiro Kasai, Tomoko Jindo, Daisuke Kobayashi, Atsuko Shimada, Atsushi Toyoda, Yoko Kuroki, Asao Fujiyama, Takashi Sasaki, Atsushi Shimizu, Shuichi Asakawa, Nobuyoshi Shimizu, Shin-ichi Hashimoto, Jun Yang, Yongjun Lee, Kouji Matsushima, Sumio Sugano, Mitsuru Sakaizumi, Takanori Narita, Kazuko Ohishi, Shinobu Haga, Fumiko Ohta, Hisayo Nomoto, Keiko Nogata, Tomomi Morishita, Tomoko Endo, Tadasu Shin-I, iroyuki Takeda, Shinichi Morishita, Yuji Kohara
- Journal Title
  
  Nature 447
  
  Pages: 714-719
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] The medaka draft genome and insights into vertebrate genome evolution2007
- Author(s)
  Kasahara M, et al.including Fujiyama and Toyoda
- Journal Title
  
  Nature 447
  
  Pages: 714-719
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018031
[Journal Article] Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway2006
- Author(s)
  Yoko Kuroki, Atsushi Toyoda, Hideki Noguchi,, Todd D. Taylor, Takehiko Itoh, Dae-Soo Kim, Dae-Won Kim,, Sang-Haeng Choi, Il-Chul Kim, Han Ho Choi, Yong Sung Kim, Yoko Satta, Naruya Saitou, Tomoyuki Yamada, Shinichi Morishita, Masahira Hattori,, Yoshiyuki Sakaki, Hong-Seog Park, Asao Fujiyama
- Journal Title
  
  NatureGenetics 38
  
  Pages: 158-167
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] コーヒー摂取の習慣は血清尿酸値とは相関せずに痛風リスクを減少させる：日欧の人種集団におけるメンデルランダム化解析より2024
- Author(s)
  大西まなみ、白井雄也、野原悠希、中山昌喜、河村優輔、豊田優、染谷真澄、中杤昌弘、清水聖子、四ノ宮成祥、岡田随象、松尾洋孝
- Organizer
  第69回防衛衛生学会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ボルバキア感染アワノメイガ細胞のscMultiome解析2024
- Author(s)
  松田(今井) 典子、室智大、福井崇弘、木内隆史、豊田敦、金井昭教、鈴木穣、伊藤武彦、勝間進
- Organizer
  日本蚕糸学会第 94 回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 臨床診断された痛風患者のみによる病型分類別のゲノムワイド関連解析と遺伝率2024
- Author(s)
  松尾洋孝、豊田優、中杤昌弘、中山昌喜、河村優輔、清水聖子、中岡博史、若井建志、松尾恵太郎
- Organizer
  第34回日本疫学会学術総会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] テトラヒメナの大規模DNA削減は複数のHP1様タンパク質の協調的作用により制御される2024
- Author(s)
  片岡研介、高橋弘喜、西本裕希、Olivera Valentirovic、吉村ゆり子、Eliot Geraud、中川れい子、谷直紀、豊田敦、望月一史、中山潤一
- Organizer
  第41回染色体ワークショップ・第22回核ダイナミクス研究会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 遺伝子発現情報を利用したブリ性拮抗選択の可視化2024
- Author(s)
  小山喬、豊田敦、水野直樹、菊池潔
- Organizer
  令和６年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] CHH hypermethylation at 24PHAS loci during meiosis in rice male meiocytes2024
- Author(s)
  Huong Ta、Taiji Kawakatsu、Atsushi Toyoda、Mutsuko Nakano、Ken-Ichi Nonomura
- Organizer
  第65回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 異質 4 倍体ワサビのゲノム解析2024
- Author(s)
  田中裕之、奈良雅大、豊田敦、山根京子、伊藤武彦
- Organizer
  日本育種学会第145回講演会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 尿中尿酸排泄率と血清尿酸値の特異的な分布パターンに基づく腎性低尿酸血症の実践的な診断モデルの提案：日本人大規模集団における臨床遺伝疫学的解析より2023
- Author(s)
  染谷真澄、河村優輔、中山昌喜、清水聖子、豊田優、鳥羽美帆、竹田圭吾、菊池理園、中嶌真由子、川口真、鈴木聡子、岩澤聡子、中島宏、角田正史、市田公美、若井建志、松尾恵太郎、四ノ宮成祥、松尾洋孝
- Organizer
  第68回防衛衛生学会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] OAT10は生理学的に重要な尿酸再吸収輸送体である2023
- Author(s)
  豊田優、高田龍平、河村優輔、中山昌喜、清水聖子、川口真、高田雄三、市田公美、四ノ宮成祥、小林靖、松尾洋孝
- Organizer
  第56回日本痛風・尿酸核酸学会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 新規遺伝子アノテーションで明らかになるスエヒロタケ複数株におけるゲノム構成の違い2023
- Author(s)
  坂本美佳松前ひろみ小木曽映里望月孝子谷澤靖洋 KRYUKOV Kirill 今西規豊田敦亀井克彦細矢剛中村保一
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] メディエーター複合体の液滴による転写ユニティー制御機構の解明2023
- Author(s)
  鈴木秀文、阿部竜太、池陽子、古郡華月、小川真太郎、豊田敦、鈴木穣、井野洋子、木村　弥生、秋山　智彦、石川博子、廣瀬　智威、山本達郎、斉藤典子、山口雄輝、高橋秀尚
- Organizer
  第96回日本生化学会大会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] コーヒー摂取の習慣は血清尿酸値とは無関係に痛風リスクを減らす：日欧の人種集団におけるゲノムワイド関連解析の結果を活用したメンデルランダム化解析より2023
- Author(s)
  河村優輔、中山昌喜、豊田優、中杤昌弘、清水聖子、四ノ宮成祥、岡田随象、松尾洋孝
- Organizer
  第56回日本痛風・尿酸核酸学会総会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] イトヨとニホンイトヨにおける雑種オス不妊メカニズムの解明に向けた、精巣組織および遺伝子発現の比較解析2023
- Author(s)
  奥出絃太、細木拓也、豊田敦、北野潤
- Organizer
  日本動物学会第94回山形大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Chromosome conformation affects the clustered breakage and complex chromosomal rearrangement in germline2023
- Author(s)
  Hidehito Inagaki、Takema Kato、Atsushi Toyoda、Yoshio Makita、Hiroki Kurahashi
- Organizer
  ICHG 2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] リュウキュウツヤハナムグリの構造色多型を生み出す分子メカニズム2023
- Author(s)
  神村学、和泉隆誠、横井翔、土屋渉、鈴木倫太郎、豊田敦、瀬筒秀樹
- Organizer
  第67回日本応用動物昆虫学会大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] キンギョをモデルとしたメラノフォアの機能を制御する分子メカニズムの解析2023
- Author(s)
  伏木宗一郎、松本沙織、湯瑞、村宮一紀、永野敦、福多賢太郎、野口英樹、豊田敦、大森義裕
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 日本人コホート集団30,685人を対象とした腎性低尿酸血症の臨床遺伝疫学的解析：実際的診断に向けて2023
- Author(s)
  染谷真澄、河村優輔、中山昌喜、清水聖子、豊田優、鳥羽美帆、竹田圭吾、菊池理園、中嶌真由子、川口真、鈴木聡子、岩澤聡子、中島宏、角田正史、市田公美、若井建志、松尾恵太郎、四ノ宮成祥、松尾洋孝
- Organizer
  第68回防衛衛生学会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 祖先転写制御の実験的復元から遺伝子が生まれる・消える過程を探る2023
- Author(s)
  原雄一郎、吉沢直子、豊田敦、川路英哉
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] OAT10は生理学的に重要な尿酸再吸収輸送体である2023
- Author(s)
  豊田優、高田龍平、河村優輔、中山昌喜、清水聖子、川口真、高田雄三、市田公美、四ノ宮成祥、小林靖、松尾洋孝
- Organizer
  第56回日本痛風・尿酸核酸学会総会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] コーヒーは尿酸値と独立して痛風リスクを減少させる：日欧の人種集団におけるメンデルランダム化解析より2023
- Author(s)
  中山昌喜、白井雄也、河村優輔、豊田優、中杤昌弘、清水聖子、四ノ宮成祥、岡田随象、松尾洋孝
- Organizer
  第33回日本疫学会学術総会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Domestication origin and genetic basis of diverse phenotypes of ornamental medaka strains2023
- Author(s)
  Kon Tetsuo、Tang Rui、Fukuta Kentaro、Fushiki Soichiro、Kon-Nanjo Koto、Noguchi Hideki、Toyoda Atsushi、Naruse Kiyoshi、Omori Yoshihiro
- Organizer
  第46回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ワサビゲノム解読の現状2023
- Author(s)
  田中裕之、堀立樹、山本祥平、豊田敦、矢野健太郎、山根京子、伊藤武彦
- Organizer
  日本育種学会第143回講演会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] コーヒー摂取の習慣は血清尿酸値とは無関係に痛風リスクを減らす：日欧の人種集団におけるゲノムワイド関連解析の結果を活用したメンデルランダム化解析より2023
- Author(s)
  河村優輔、中山昌喜、豊田優、中杤昌弘、清水聖子、四ノ宮成祥、岡田随象、松尾洋孝
- Organizer
  第56回日本痛風・尿酸核酸学会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Cooperation of Multiple HP1-like proteins ensures robust DNA elimination in Tetrahymena2023
- Author(s)
  Kensuke Kataoka、Hiroki Takahashi、Yuki Nishimoto、Olivera Valentirovic、Yuriko Yoshimura、Eliot Geraud、Reiko Nakagawa、Naoki Tani、Hidetaka Koasako、Atsushi Toyoda、Kazufumi Mochizuki、Jun-ichi Nakayama
- Organizer
  Ciliate Molecular Biology Meeting 2023
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ホウレンソウから見出される多様な性表現型2023
- Author(s)
  小野寺康之、平川英樹、豊田敦、田中啓介、パチャキルバビル
- Organizer
  第46回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Gonadal stem cell: a possible solution of futuristic aquaculture.2023
- Author(s)
  Tapas Chakraborty、Sota Kawao、Kodai mizumura、Akira Eguchi、Sipra Mohapatra、Takehiko Itoh、Atsushi Toyoda、Naoki Nagano、Kohei Ohta、Michiya Matsuyama
- Organizer
  令和５年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 褐虫藻Breviolum minutumの増殖制御に関与するcold shock proteinのChIP-seq解析2023
- Author(s)
  吉原静恵、水口洋平、豊田敦、徳本勇人
- Organizer
  第64回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 日本産キセルガイのPhylogenomics(続報)2023
- Author(s)
  石川彰人、スティアマルガ・デフィン、豊田敦、鈴木穣、上島励
- Organizer
  日本貝類学会令和5年度大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 新規遺伝子アノテーションで明らかになるスエヒロタケ複数株におけるゲノム構成の違い2023
- Author(s)
  坂本美佳、松前ひろみ、小木曽映里、望月孝子、谷澤靖洋、クリュコフ・キリル、今西規、豊田敦、亀井克彦、細矢剛、中村保一
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] オオミジンコにおける性差を示すアイソフォームの同定2023
- Author(s)
  加藤泰彦、新田ジョエル、Christelle Alexa Perez、 Nikko Adhitama、豊田敦、岩崎渉、渡邉肇
- Organizer
  日本動物学会第94回山形大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] キンギョのパール鱗変異体をモデルとした鱗形成機構の理解2023
- Author(s)
  松本沙織、黄一丞、湯瑞、伏木宗一郎、村宮一紀、永野敦、野口英樹、福多賢太郎、豊田敦、大森義裕
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 環形動物ヤマトヒメミミズの再生関連遺伝子系統比較解析2023
- Author(s)
  野呂知加子、井上菜穂子、斎藤稔、豊田敦、小林功
- Organizer
  日本動物学会第94回山形大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Knowledge and remaining questions of adult pluripotent stem cell in freshwater planarians.2023
- Author(s)
  Makoto Kashima、Rei Komura、Rei Kajitani、Takehiko Itoh、Atsushi Toyoda
- Organizer
  第56回日本発生生物学会大会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 腎臓における尿酸輸送体としてのOAT10の分子生理学的理解2022
- Author(s)
  豊田優、高田龍平、河村優輔、中山昌喜、森本渓音、清水聖子、四ノ宮成祥、小林靖、松尾洋孝
- Organizer
  第95回日本生化学会大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Mendelian randomization analyses revealed that coffee consumption reduces gout risk independently of serum uric acid levels2022
- Author(s)
  Akiyoshi Nakayama, Yuya Shirai, Yusuke Kawamura, Yu Toyoda, Masahiro Nakatochi, Seiko Shimizu, Nariyoshi Shinomiya, Yukinori Okada, Hirotaka Matsuo
- Organizer
  European Crystal Network Workshop 2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] キンギョ網膜のシングルセルRNA-seq解析による全ゲノム重複後の遺伝子進化の解明2022
- Author(s)
  Tetsuo Kon、Fukuta Kentaro、Masakazu Ishikawa、Hikari Tanaka、Hideki Noguchi、Atsushi Toyoda、Yoshihiro Omori
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 社会環境依存型の性転換における脳下垂体の関与2022
- Author(s)
  山本優芽、花井匠磨、Chakraborty Tapas、豊田敦、伊藤武彦、松山倫也、長濱嘉孝、太田耕平
- Organizer
  令和４年度日本水産学会秋季大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 乳幼児腸内フローラの再構成プロセスにおける代謝機能変動2022
- Author(s)
  今大路治之、豊田敦、高見英人、田中彩、下野隆一、桑原知巳
- Organizer
  第９５回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-19H04056
[Presentation] Drosophila METTL1 Induces m7G into tRNA to Preserve Complete Fertility2022
- Author(s)
  Shunya Kaneko、Keita Miyoshi、Shu Kondo、Atsushi Toyoda、Makoto Terauchi、Hideki Noguchi、Kuniaki Saito
- Organizer
  第23回日本RNA学会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 免疫システムがもたらしたシクリッドの唇肥大化平行進化2022
- Author(s)
  畑島諒, 待井長敏, 豊田敦, 梶谷嶺, 長澤竜樹, 伊藤武彦, 二階堂雅人
- Organizer
  第2回日本遺伝学会春の分科会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] OAT10は腎臓に発現する生理的に重要な尿酸輸送体である2022
- Author(s)
  豊田優、高田龍平、河村優輔、中山昌喜、森本渓音、清水聖子、藤原慎、鳥羽美帆、菊池理園、四ノ宮成祥、小林靖、松尾洋孝
- Organizer
  第16回トランスポーター研究会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ショウジョウバエRNAメチル化酵素METTL1はtRNAのm7G修飾を介して精子形成・稔性を制御する2022
- Author(s)
  金子隼也、三好啓太、近藤周、豊田敦、寺内真、野口英樹、齋藤都暁
- Organizer
  日本遺伝学会第94回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 日本人集団３万人における尿酸再吸収輸送体遺伝子URAT1/SLC22A12の機能消失型変異がもたらす影響についての臨床遺伝学的検討2022
- Author(s)
  中山昌喜、河村優輔、豊田優、清水聖子、染谷真澄、田中里沙、森友理乃、今給黎敏彦、岩澤聡子、中島宏、角田正史、伊藤敬一、有澤孝吉、嶽崎俊郎、田中恵太郎、高田龍平、市田公美、若井建志、四ノ宮成祥、松尾洋孝
- Organizer
  第16回トランスポーター研究会年会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] “湖の微生物生態系”を対象としたゲノム・多型・遺伝子発現の網羅的比較解析2022
- Author(s)
  岡崎友輔、中野伸一、豊田敦、玉木秀幸
- Organizer
  日本微生物生態学会第35回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 集団遺伝学のモデル菌類としてのスエヒロタケのゲノム解析2022
- Author(s)
  松前ひろみ、坂本美佳、小木曽映里、須藤恵美、クリュコフキリル、望月孝子、谷澤靖洋、今西規、今西規、豊田敦、中村保一、亀井克彦、細矢剛
- Organizer
  日本進化学会第24回沼津大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Rhizobium vitis VAR03-1株のブドウ根頭がんしゅ病拮抗能を司るテイロシンrhizoviticinの機能解析2022
- Author(s)
  土田菜月, 石井智也, 渡邉恵, 齊藤晶, 包継源, ヘメルダニアルシメリー, 佐藤繭子, 豊岡公徳, 石濱伸明, 白須賢, 豊田敦, 松原岳大, 松井英譲, 山本幹博, 豊田和弘, 一瀬勇規, 川口章, 能年義輝
- Organizer
  令和4年度日本植物病理学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] URAT1遺伝子の機能低下型変異による痛風の保護効果は、ABCG2遺伝子の機能低下型変異による痛風のリスク亢進効果を上回る2022
- Author(s)
  豊田優, 河村優輔, 中山昌喜, 東野俊英, 清水聖子, 大山博司, 市田公美, 四ノ宮成祥, 高田龍平, 松尾洋孝
- Organizer
  第55回日本痛風・尿酸核酸学会総会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 尿中尿酸排泄率と血清尿酸値の特徴的な分布パターンに基づく腎性低尿酸血症の実践的な診断モデルの提案 : 日本人30685人を対象とした臨床遺伝疫学的解析より2022
- Author(s)
  河村優輔, 中山昌喜, 豊田優, 川口真, 高田雄三, 清水聖子, 高田龍平, 市田公美, 四ノ宮成祥, 松尾洋孝
- Organizer
  第55回日本痛風・尿酸核酸学会総会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] METTL1-mediated m7G modification regulates tRNA expression level to preserve complete fertility in Drosophila melanogaster2022
- Author(s)
  Shunya KANEKO、Keita MIYOSHI、Shu KONDO、Atsushi TOYODA、Makoto TERAUCHI、Hideki NOGUCHI、Kuniaki SAITO
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] A universal subcuticular bacterial symbiont of the coral predator, crown-of-thorns starfish2022
- Author(s)
  Naohisa WADA、Hideaki YUASA、Rei KAJITANI、Yasuhiro GOTOH、Yoshitoshi OGURA、Dai YOSHIMURA、Atsushi TOYODA、Sen-Lin TANG、Yukio HIGASHIMURA、Hugh SWEATMAN、Zac FORSMAN、Omri BRONSTEIN、Gal EYAL、Nalinee THONGTHAM、Kei Zaitsu、Tetsuya HAYASHI、Takehiko ITOH、Nina YASUDA
- Organizer
  Australian Marine Science Association 2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] シロイヌナズナの時計遺伝子LHYにおける上流ORFを介した日周的に変動する翻訳制御機構2022
- Author(s)
  青山　悠、荒江　星拓、反田　直之、豊田　敦、千葉　由佳子
- Organizer
  第10回植物ＲＮＡ研究ネットワークシンポジウム
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] Involvement of the pituitary gland in social-environment-dependent sex change2022
- Author(s)
  Yume Yamamoto、Shoma Hanai、Tapas Chakraborty、Astushi Toyoda、 Takehiko Itoh、Michiya Matsuyama、Yoshitaka Nagahama、Kohei Ohta
- Organizer
  International Conference on Responsible Aquaculture and Sustainable Fisheries Interact
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ゲノム進化のモデル生物と疾患の解明を目指すスエヒロタケの全ゲノム解析2022
- Author(s)
  松前ひろみ、坂本美佳、小木曽映里、須藤恵美、クリュコフキリル、望月孝子、谷澤靖洋、今西規、豊田敦、中村保一、亀井克彦、細矢剛
- Organizer
  日本菌学会第66回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 日本人コホート集団30,685人を対象とした腎性低尿酸血症の臨床遺伝疫学的解析 : 実際的診断に向けて2022
- Author(s)
  河村優輔, 中山昌喜, 豊田優, 西田裕一郎, 菱田朝陽, 釜野桜子, 渋谷謙一, 田村高志, 中島宏, 指宿りえ, 上村浩一, 原めぐみ, 竹内研時, 角田正史, 有澤幸吉, 嶽崎俊郎, 田中恵太郎, 若井建志, 四ノ宮成祥, 松尾洋孝
- Organizer
  第32回日本疫学会学術総会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Effect of the chromatin domains on clustered breakpoint formation in complex chromosomal rearrangement2022
- Author(s)
  Hidehito Inagaki、Takema Kato、Atsushi Toyoda、Yoshio Makita、Hiroki Kurahas
- Organizer
  日本人類遺伝学会第67回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 異なる性表現タイプのボルボックス間比較ゲノム解析からホモタリック化に伴う性決定領域の進化を探る2022
- Author(s)
  山本荷葉子、松崎令、Wuttipong Mahakham、Wirawan Heman、関本弘之、河地正伸、水口洋平、豊田敦、野崎久義
- Organizer
  日本植物学会第86回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] コーヒーは尿酸値とは無関係に痛風リスクを減らす：ゲノムワイド関連解析の結果を用いたメンデルランダム化解析から2022
- Author(s)
  中山昌喜、白井雄也、河村優輔、豊田優、中杤昌弘、清水聖子、四ノ宮成祥、岡田随象、松尾洋孝
- Organizer
  第40回日本ヒト細胞学会学術集会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ヒメミカヅキモにおけるコピー数変異がもたらした顕著なゲノムサイズ多型と遺伝子発現への影響2022
- Author(s)
  川口也和子、土金勇樹、田中啓介、太治輝昭、豊田敦、西山智明、関本弘之、土松隆志
- Organizer
  日本進化学会第24回沼津大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 腎性低尿酸血症の原因遺伝子URAT1/SLC22A12の日本人30,685名における臨床遺伝学的解析：実際的診断に向けて2022
- Author(s)
  河村優輔、中山昌喜、清水聖子、豊田優、染谷真澄、小田悠太、鳥羽美帆、川口真、鈴木聡子、岩澤聡子、中島宏、高田龍平、角田正史、有澤幸吉、嶽崎俊郎、田中恵太郎、市田公美、若井建志、四ノ宮成祥、松尾洋孝
- Organizer
  日本人類遺伝学会第67回大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] ヒメミカヅキモにおける顕著なゲノムサイズ多型の進化的起源と遺伝子発現2022
- Author(s)
  川口也和子, 土金勇樹, 田中啓介, 太治輝昭, 豊田敦, 西山智明, 関本弘之, 土松隆志
- Organizer
  第69回日本生態学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Repeated translocation of a supergene underlying rapid sex chromosome turnover(転移型の性決定領域が性染色体の急速な置換をもたらす)2022
- Author(s)
  Ahammad Kabir, Risa Ieda, Sho Hosoya, Daigaku Fujikawa, Kazufumi Atsumi, Shota Tajima, Aoi Nozawa, Takashi Koyama, Shotaro Hirase, Osamu Nakamura, Mitsutaka Kadota, Osamu Nishimura, Shigehiro Kuraku, Yasukazu Nakamura, Hisato Kobayashi, Atsushi Toyoda, Satoshi Tasumi, Kiyoshi Kikuchi
- Organizer
  令和4年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ホウレンソウ間性株における雌花着生率に関するQTL解析2022
- Author(s)
  山野　薫、豊田敦、平川英樹、小野寺康之
- Organizer
  日本育種学会第142回講演会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] イネ免疫を制御するRALFファミリーペプチドの機能解析2022
- Author(s)
  深田史美, Ting Guo, Wang Wanqing, 西村秀希, 小野奈津子, 水口洋平, 豊田敦, 古田智敬, 河野洋治
- Organizer
  令和4年度日本植物病理学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Long-read-resolved, ecosystem-wide exploration of nucleotide and structural microdiversity of lake bacterioplankton genomes2022
- Author(s)
  Okazaki Y、Nakano S、Toyoda A、Tamaki H
- Organizer
  18th International Symposium on Microbial Ecology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] APOE ε2ハプロタイプは血清尿酸値を増加させる2022
- Author(s)
  小倉正恒, 豊田優, 河村優輔, 中山昌喜, 高田龍平, 清水聖子, 東野俊英, 中嶌真由子, 四ノ宮成祥, 松尾洋孝
- Organizer
  第55回日本痛風・尿酸核酸学会総会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Male sex-determining region retained after transition from heterothallism to homothallism in a Thai strain of Volvox africanus2022
- Author(s)
  Kayoko Yamamoto、Ryo Matsuzaki、Wuttipong Mahakham、Wirawan Heman、Hiroyuki Sekimoto、Masanobu Kawachi、Yohei Minakuchi、Atsushi Toyoda、and Hisayoshi Nozaki
- Organizer
  Volvox2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] m7G RNA modification by METTL1 stabilizes tRNAs and maintains fertility via controlling spermatogenesis in Drosophila melanogaster2022
- Author(s)
  Shunya KANEKO、Keita MIYOSHI、Shu KONDO、Atsushi TOYODA、Makoto TERAUCHI、Hideki NOGUCHI、Kuniaki SAITO
- Organizer
  Cold Spring Harbor Asia, RNA Biology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 乳幼児腸内フローラの再構成プロセスにおける代謝機能変動2022
- Author(s)
  今大路治之、豊田敦、高見英人、田中彩、下野隆一、桑原知巳
- Organizer
  第９５回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-20H04125
[Presentation] キンギョ網膜のシングルセル遺伝子発現解析による全ゲノム重複後のサブゲノム初期進化過程の理解2022
- Author(s)
  大森義裕、今鉄男、福多賢太郎、野口英樹、豊田敦
- Organizer
  NEURO2022 第45回日本神経科学大会第65回日本神経化学会大会第32回日本神経回路学会大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] メディエーター複合体による新規の転写スピード調節機構の解明2022
- Author(s)
  鈴木秀文、阿部竜太、嶋田美穂、廣瀬智威、廣瀬博子、野口慶介、池陽子、安井七海、古郡華月、山口雄輝、豊田敦、鈴木穣、山本達郎、斉藤典子、Sato Shigeo、Tomomori-Sato Chieri、Conaway Ronald、Conaway Joan、髙橋秀尚
- Organizer
  第45回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 染色体スケールのホウレンソウゲノム配列を活用した間性株の雌花率に関するQTL解析2022
- Author(s)
  山野薫、豊田敦、平川英樹、小野寺康之
- Organizer
  日本育種学会・日本作物学会北海道談話会年次講演会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] カタクチイワシEngraulis japonicusをモデルとした生殖腺の性差に関わるエピジェネティック修飾の解析法2022
- Author(s)
  江藤悠平, Tapas Chakraborty, 北野載, 豊田敦, 伊藤武彦, 松山倫也, 太田耕平
- Organizer
  令和4年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 日本産キセルガイのPhylogenomics(予報)2022
- Author(s)
  石川彰人、スティアマルガ・デフィン、豊田敦、鈴木穣、上島励
- Organizer
  日本貝類学会令和4年度大会
- Data Source
  KAKENHI-PROJECT-22H04925
[Presentation] 尿酸輸送体遺伝子URAT1/SLC22A12の機能消失型変異の影響 : 日本人集団4,993名における低尿酸血症の遺伝子解析2021
- Author(s)
  中山昌喜, 河村優輔, 豊田優, 清水聖子, 川口真, 鳥羽美帆, 田中里沙, 竹内研時, 岡田理恵子, 久保陽子, 今給黎敏彦, 岩澤聡子, 中島宏, 角田正史, 伊藤敬一, 熊谷裕生, 高田龍平, 市田公美, 四ノ宮成祥, 松尾洋孝
- Organizer
  第39回日本ヒト細胞学会学術集会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] シロイヌナズナにおけるミトコンドリア機能不全時のゲノムコピー数と遺伝子発現量の解析2021
- Author(s)
  綾部弘基, 豊田敦, 堤伸浩, 有村慎一
- Organizer
  日本育種学会第140回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Rhizobium vitis VAR03-1株のブドウ根頭がんしゅ病拮抗能を司るテイロシンrhizoviticinの機能解析2021
- Author(s)
  土田菜月, 石井智也, 渡邉恵, 齊藤晶, 包継源, 佐藤繭子, 豊岡公徳, 石濱伸明, 白須賢, 豊田敦, 松原岳大, 松井英譲, 山本幹博, 一瀬勇規, 豊田和弘, 川口章, 能年義輝
- Organizer
  日本植物病理学会令和3年度(第55回)植物感染生理談話会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Why and how are there so rare type 1 interferon-producing cells among virus-infected cells?2021
- Author(s)
  Yuki Masuda, Tomohiko Okazaki, Shimpei Toyoda, Merve Bilgic, Hiroki Sugishita and Yukiko Gotoh
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] メディエーター複合体による新規の3' PolⅡポージング制御機構の解明2021
- Author(s)
  鈴木秀文, 阿部竜太, 嶋田美穂, 廣瀬智威, 廣瀬博子, 野口慶介, 古郡華月, 池陽子, 安井七海, 山口雄輝, 豊田敦, 鈴木穣, 山本達郎, 斉藤典子, Ronald C. Conaway, Joan W. Conaway, 高橋秀尚
- Organizer
  第44回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ミドリイガイ全ゲノム配列の解明と足糸関連遺伝子の探索2021
- Author(s)
  井上広滋、善岡祐輝、田中裕之、金城梓、佐々三依子、植田育男、新里宙也、豊田敦、伊藤武彦
- Organizer
  令和3年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] デメキン(Carrassius auratus)をモデルとした眼球サイズ制御機構の理解2021
- Author(s)
  大森義裕, 今鉄男, 福多賢太郎, 松浦佳吾, 豊田敦, 野口英樹
- Organizer
  第94回日本生化学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 2種の野生種トマトの参照ゲノム配列構築2021
- Author(s)
  武井瞳、白澤健太、桑原康介、豊田敦、松澤佑馬、飯岡真司、有泉亨
- Organizer
  日本育種学会第139回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 東アフリカ産シクリッドで見られる唇肥大化平行進化の分子メカニズム2021
- Author(s)
  畑島諒, 豊田敦, 梶谷嶺, 伊藤武彦, 二階堂雅人
- Organizer
  第23回日本進化学会年大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 長期継代マウス系統の解析から見えてきた自然発生変異の特徴2021
- Author(s)
  内村有邦, 佐藤康成, 樋口真弓, 水口洋平, 豊田敦, 八木健
- Organizer
  日本遺伝学会第93回大会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 二粒系コムギとタルホコムギの間に見られる雑種不全の原因遺伝子単離に向けて2021
- Author(s)
  松岡宏樹, 吉村信一, 森崎良太, 宅見薫雄, 豊田敦, 田中裕之, 伊藤武彦, Axel Himmelbach, Nils Stein, 佐久間俊, 松岡由浩, 吉田健太郎
- Organizer
  第16回ムギ類研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ユーストマの全ゲノム解読とDNAマーカー開発(学会のプレスリリース課題に選定されたとのことhttps://www.nacos.com/jsb/06/06press.html)2021
- Author(s)
  川勝恭子、豊田敦、永野惇、川勝泰二、中野善公、今村仁、福田直子、久松完、山口博康、望月孝子、谷澤靖洋、坂本美佳、中村保一
- Organizer
  日本育種学会第139回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ユーストマの全ゲノム解読とDNAマーカー開発2021
- Author(s)
  川勝恭子, 豊田敦, 永野惇, 川勝泰二, 中野善公, 今村仁, 福田直子, 久松完, 山口博康, 望月孝子, 谷澤靖洋, 坂本美佳, 中村保一
- Organizer
  日本育種学会第139回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 尿酸輸送体遺伝子URAT1/SLC22A12の機能消失型変異に対する日本人集団4,993名における低尿酸血症の遺伝解析2021
- Author(s)
  中山昌喜, 河村優輔, 豊田優, 清水聖子, 川口真, 堀江美音, 青木優佳, 竹内研時, 岡田理恵子, 久保陽子, 今給黎敏彦, 岩澤聡子, 中島宏, 角田正史, 伊藤敬一, 熊谷裕生, 高田龍平, 市田公美, 四ノ宮成祥, 松尾洋孝
- Organizer
  日本人類遺伝学会第66回大会第28回日本遺伝子診療学会大会合同開催
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Chromatin-domains affect the clustered breakpoint formation in complex chromosomal rearrangement2021
- Author(s)
  Hidehito Inagaki, Takema Kato, Atsushi Toyoda, Yoshio Makita, and Hiroki Kurahashi
- Organizer
  ASHG 2021 Virtual Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ロングリード・シークエンスによる連続する2つの微細欠失の構造解析2021
- Author(s)
  田村豪良, 下島圭子, 谷ケ崎博, 菅野仁, 岡本伸彦, 豊田敦, 山本俊至
- Organizer
  日本人類遺伝学会第66回大会第28回日本遺伝子診療学会大会合同開催
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Goldfish (Carassius auratus) and closely related species, and evolution after whole genome duplication2021
- Author(s)
  大森義裕, 今鉄男, 福多賢太郎, 西野鞠, 野田夏希, 豊田敦, 野口英樹
- Organizer
  第44回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Rhizobium vitis VAR03-1株のブドウ根頭がんしゅ病拮抗能を司るテイロシンrhizoviticinの機能解析2021
- Author(s)
  土田菜月, 石井智也, 渡邉恵, 齊藤晶, 包継源, 佐藤繭子, 豊岡公徳, 石濱伸明, 白須賢, 豊田敦, 松原岳大, 松井英譲, 山本幹博, 一瀬勇規, 豊田和弘, 川口章, 能年義輝
- Organizer
  令和3年度日本植物病理学会関西部会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Protective effect of common and rare variants of URAT1/SLC22A12 on gout2021
- Author(s)
  Yu Toyoda, Yusuke Kawamura, Akiyoshi Nakayama, Hirofumi Nakaoka, Toshihide Higashino, Seiko Shimizu, Hiroshi Ooyama, Keito Morimoto, Naohiro Uchida, Ryuichiro Shigesawa, Kenji Takeuchi, Ituro Inoue, Kimiyoshi Ichida, Hiroshi Suzuki, Nariyoshi Shinomiya, Tappei Takada, Hirotaka Matsuo
- Organizer
  The 19th International Purine and Pyrimidine Symposium
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] A key factor for parallel evolution of hypertrophied lips in East African cichlid fishes2021
- Author(s)
  Hatashima, R., Toyoda, A., Kajitani, R. Itoh, T. and Nikaido, M.
- Organizer
  The 2nd AsiaEvo Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Rhizobium vitis VAR03-1 株のブドウ根頭がんしゅ病拮抗能を司るテイロシンrhizoviticinの機能解析2021
- Author(s)
  土田菜月, 石井智也, 渡邉恵, 齊藤晶, 包継源, 佐藤繭子, 豊岡公徳, 石濱伸明, 白須賢, 豊田敦, 松原岳大, 松井英譲, 山本幹博, 一瀬勇規, 豊田和弘, 川口章, 能年義輝
- Organizer
  ウイルス学若手研究集会2021
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Characterization of rhizoviticin, a phage tail-like particle, as a determinant of biocontrol activity of Rhizobium vitis VAR03-1 on crown gall disease of grapevine.2021
- Author(s)
  Tsuchida, N., Ishii, T., Watanabe, M., Saito, K., Bao, J., Sato, M., Toyooka, K., Ishihama, N., Shirasu, K., Toyoda, A., Matsubara, T., Matsui, H., Yamamoto, M., Ichinose, Y., Toyoda, K., Kawaguchi, A., Noutoshi, Y.
- Organizer
  Plant Microbe Research Network (PMRN)第1回オンラインシンポジウム
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Spinacia属植物の性染色体の構造比較2021
- Author(s)
  小野寺康之, 藤田拓希, 杉山優, 豊田敦, 平川英樹
- Organizer
  日本育種学会第140回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 宿主ショウジョウバエの発生を操作する内部寄生蜂Asobara japoniraの毒の同定を目指して2021
- Author(s)
  島田裕子, 上山拓己, 森一葉, 藤井美月, 清家和樹, 片山南美, 竹股ひとみ, 谷直紀, 中村輝, 田中裕之, 豊田敦, 伊藤武彦, 丹羽隆介
- Organizer
  第67回トキシンシンポジウム
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ヒメミカヅキモ種内にみられる大規模なゲノムサイズ変異の進化的起源2021
- Author(s)
  川口也和子, 土金勇樹, 田中啓介, 太治輝昭, 豊田敦, 西山智明, 関本弘之, 土松隆志
- Organizer
  第23回日本進化学会年大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Substantial gout protective effect by common and rare variants of URAT1/SLC22A12 gene2021
- Author(s)
  Yu Toyoda, Yusuke Kawamura, Akiyoshi Nakayama, Hirofumi Nakaoka, Toshihide Higashino, Seiko Shimizu, Hiroshi Ooyama, Keito Morimoto, Naohiro Uchida, Ryuichiro Shigesawa, Kenji Takeuchi, Ituro Inoue, Kimiyoshi Ichida, Hiroshi Suzuki, Nariyoshi Shinomiya, Tappei Takada, and Hirotaka Matsuo
- Organizer
  23th APLAR (Asia-Pacific League of Associations for Rheumatology) Congress
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 東アフリカ産シクリッドで見られる唇肥大化平行進化の分子メカニズム2021
- Author(s)
  畑島諒, 豊田敦, 梶谷嶺, 伊藤武彦, 二階堂雅人
- Organizer
  The 2nd AsiaEvo Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Global view of translation and mRNA levels in the Arabidopsis deadenylase mutants2021
- Author(s)
  Taku Tokunaka, Toshihiro Arae, Seidai Takamatsu, Atsushi Toyoda, Yukako Chiba
- Organizer
  The 62th Annual Meeting of JSPP
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Proposal of more practical diagnosis of renal hypouricemia : revealed by genetic studies of nonfunctional variants of URAT1/SLC22A12 among 30,685 Japanese individuals2021
- Author(s)
  Yusuke Kawamura, Akiyoshi Nakayama, Seiko Shimizu, Yu Toyoda, Hiroshi Nakashima, Masashi Tsunoda, Nariyoshi Shinomiya, Kenji Takeuchi, Kenji Wakai, Tappei Takada, Kokichi Arisawa, Toshiro Takezaki, Keitaro Tanaka, Kimiyoshi Ichida, Hirotaka Matsuo
- Organizer
  G-CAN 7th Annual Research Symposium
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 内部寄生蜂Asobara japonicaの寄生成立を司る毒成分の同定に向けたマルチオミクス解析2021
- Author(s)
  上山拓己, 島田裕子, 田中裕之, 豊田敦, 伊藤武彦, 丹羽隆介
- Organizer
  第92回日本動物学会オンライン米子大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ヒメツリガネゴケ重力屈性変異体gtrの表現型解析と原因遺伝子探索2021
- Author(s)
  小針寛乃, 逵ローレンスかおる, 豊田敦, 平川英樹, 日渡祐二
- Organizer
  東北植物学会第11回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ロングリード解析で拓くメタゲノムビニングの限界と環境細菌ゲノムの微小多様性2021
- Author(s)
  岡崎友輔, 中野伸一, 豊田敦, 玉木秀幸
- Organizer
  日本微生物生態学会第34回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] シクリッドにおける唇肥大化の平行進化メカニズム2020
- Author(s)
  畑島諒、豊田敦、梶谷嶺、伊藤武彦、二階堂雅人
- Organizer
  日本動物学会第91回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] De novo生殖系列変異の特徴と後世代影響2020
- Author(s)
  内村有邦、佐藤康成、樋口真弓、水口洋平、豊田敦、八木健
- Organizer
  日本遺伝学会第92回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ヴィクトリア湖産シクリッドHaplochromis chilotesの全ゲノム配列解析による分集団における適応過程の解明2020
- Author(s)
  中村遥奈、畑島諒、相原光人、豊田敦、伊藤武彦、二階堂雅人
- Organizer
  日本進化学会第22回オンライン大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Update of Platanus-allee, a de novo haplotype assembler, and its application to the organisms with highly divergent haplotypes2020
- Author(s)
  Rei Kajitani, Miki Okuno, Hiroyuki Tanaka, Atsushi Toyoda, Takehiko Itoh
- Organizer
  Plant & animal genome conference XXVIII
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ホウレンソウ育種の効率化に向けた Pseudomoleculeの構築2020
- Author(s)
  平川英樹、豊田敦、伊藤武彦、鈴木穣、永野惇、杉山優、小野寺康之
- Organizer
  日本育種学会第138回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ビワがんしゅ病抵抗性遺伝子(pse-c)のファインマッピング2020
- Author(s)
  福田伸二・文園千佳子・川口揚豊・松隈公孝・永野幸生・坂口龍之介・伊藤武彦・奥野未来・豊田敦
- Organizer
  日本植物病理学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Evolutional diversity of CENP-A essential motif and its binding mode to HJURP2020
- Author(s)
  Tetsuya Hori, Jinghui Cao, Yasuhiro Arimura, Kohei Nishimura, Mariko Ariyoshi, Atsushi Toyoda, Sadahiko Misu, Kazuho Ikeo, Hitoshi Kurumizaka, Tatsuo Fukagawa
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 全ゲノム解析によるヴィクトリア湖産シクリッドにおける種特有の適応パターンの解明2020
- Author(s)
  中村遥奈、相原光人、豊田敦、伊藤武彦、二階堂雅人
- Organizer
  日本遺伝学会第92回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Analysis of gap regions in 22q11 by using long read sequencing technology2020
- Author(s)
  Hidehito Inagaki, Takema Kato, Atsushi Toyoda, Yoshio Makita, Hiroki Kurahashi
- Organizer
  日本人類遺伝学会第65回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 全ゲノムデータからみたヒメミカヅキモの自殖系統におけるホメオログ間組み換え2020
- Author(s)
  川口也和子、土金勇樹、田中啓介、太治輝昭、豊田敦、西山智明、関本弘之、土松隆志
- Organizer
  日本植物学会第84回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 新規ホウレンソウ pseudomolecule を用いた重要育種形質のQTL解析2020
- Author(s)
  小野寺康之、杉山優、豊田敦、伊藤武彦、鈴木穣、永野惇、平川英樹
- Organizer
  日本育種学会第138回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Mechanoreceptor-mediated circuit regulates cold tolerance in Caenorhabditis elegans2020
- Author(s)
  Natsune Takagaki, Akane Ohta, Kohei Ohnishi, Akira Kawanabe, Yohei Minakuchi, Atsushi Toyoda, Yuichiro Fujiwara & Atsushi Kuhara
- Organizer
  関西線虫勉強会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Rhizobium vitis VARO3-1株のブドウ根頭がんしゅ病に対する拮抗能を司るテイロシンの解析2020
- Author(s)
  石井智也, 齊藤晶, 渡邉恵, 佐藤繭子, 豊岡公徳, 石濱伸明, 白須賢, 包継源, 松井英譲, 山本幹博, 一瀬勇規, 豊田和弘, 川口章, 能年義輝
- Organizer
  日本植物病理学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] バルクシーケンスによるビワがんしゅ病抵抗性遺伝子(Pse-a)領域の推定2019
- Author(s)
  松隈公孝・石本慶一郎・稗圃直史・永野幸生・伊藤武彦・奥野未来・豊田敦・永野惇・山本俊哉・福田伸二
- Organizer
  園芸学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] イチジク株枯真性抵抗性を有するイヌビワの全ゲノム解読2019
- Author(s)
  白澤健太・薬師寺博・森田剛成・軸丸祥大・池上秀利・豊田敦・平川英樹・磯部祥子
- Organizer
  園芸学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] De novo germline mutations and the phenotypic effects of mutation accumulation in Iaboratory mice2019
- Author(s)
  Arikuni Uchimura, Yasunari Satoh, Mayumi Higuchi, Yohei Minakuchi, Jo Nishino, Atsushi Toyoda, Takeshi Yagi
- Organizer
  The 16th International Congress of Radiation Research 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Rhizobium vitis VAR03-1株によるブドウ根頭がんしゅ病の抑制機構の解析2019
- Author(s)
  石井智也・齊藤晶・渡邉恵・松井英譲・山本幹博・一瀬勇規・豊田和弘・川口章・能年義輝
- Organizer
  H31年度日本植物病理学会大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] The evolution of mating type locus-like regions in the homothallic species Volvox africanus2019
- Author(s)
  Yamamoto, K., Hamaji, T., Kawai-Toyooka, H., Noguchi, H., Minakuchi, Y., Toyoda, A., and Nozaki, H.
- Organizer
  The International symposium organized by “Platform for Advanced Genome Science” -FRONTIERS OF GENOME SCIENCE-
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] アストレフォメネの多細胞形質進化の解明に向けた新規ゲノムと形質転換の確立2019
- Author(s)
  山下翔大、数口敦紀、山本荷葉子、松﨑令、野口英樹、水口洋平、豊田敦、河地正伸、廣野雅文、関本弘之、野崎久義
- Organizer
  日本植物形態学会第31回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] CRISPR/Cas9 nickaseによるサイレント変異不要のノックイン2019
- Author(s)
  兵頭寿典, Md Lutfur Rahman, 豊田敦, Sivasundaram Karnan, 太田明伸, 都築忍, 細川好孝, 小西裕之
- Organizer
  日本ゲノム編集学会第4回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 接合藻ヒメミカヅキモにおける生殖様式の進化 : 有性生殖関連遺伝子の系統間比較2019
- Author(s)
  川口也和子, 土金勇樹, 田中啓介, 太治輝昭, 豊田敦, 西山智明, 関本弘之, 土松隆志
- Organizer
  日本植物学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] A new approach for de novo germline mutations using a mutation accumulation mouse model2019
- Author(s)
  Arikuni Uchimura, Mayumi Higuchi, Yasunari Satoh, Yohei Minakuchi, Takahiro Tsuji, Masaaki Imanaka, Akiko Miura, Atsushi Toyoda, Takeshi Yagi
- Organizer
  日本放射線影響学会第62回大会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Revealing mating type locus evolution based on comparative genomics of heterothallic and homothallic Volvox species2019
- Author(s)
  Yamamoto, K., Hamaji, T., Kawai-Toyooka, H., Noguchi, H., Minakuchi, Y., Toyoda, A. and Nozaki, H.
- Organizer
  The Fifth International Volvox Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 抗菌薬暴露後に変動する乳幼児腸内フローラの代謝機能2019
- Author(s)
  今大路治之、田中彩、下野隆一、豊田敦、高見英人、桑原知巳
- Organizer
  第９３回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-19H04056
[Presentation] 千葉県・西広および祇園原貝塚出土縄文人骨の集団ゲノム解析(第一報)2019
- Author(s)
  和久大介、覚張隆史、Guido M. Valverde、長岡朋人、平田和明、豊田敦、米田穣、高橋龍三郎、太田博樹
- Organizer
  第73回日本人類学会大会(佐賀)
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Temperature sensation via mechanoreceptor DEG-1 in C. elegans cold tolerance2019
- Author(s)
  Natsune Takagaki, Akane Ohta, Kohei Ohnishi, Yohei Minakuchi, Atsushi Toyoda, Yuichiro Fujiwara & Atsushi Kuhara
- Organizer
  遺伝学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Helicobacter cinaedi の DNA 修飾関連遺伝子ノックアウト株における遺伝子発現変化2019
- Author(s)
  林原絵美子, 豊田敦, 森茂太郎, 金玄, 柴山恵吾
- Organizer
  第92回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] セントロメア特異的に転移するレトロトランスポゾンTallの挿入領域のロングリードシーケンスによる解析2019
- Author(s)
  塚原小百合、加藤夏恵、河邊昭、豊田敦、角谷徹仁
- Organizer
  日本遺伝学会第91回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 卵生殖ボルボックス性染色体領域の拡大2019
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本植物学会第83回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ブリ属の性決定領域ゲノム配列比較2019
- Author(s)
  小山喬・車遥介・菊池潔・森島輝・豊田敦
- Organizer
  平成30年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Tandem paired nicking using Cas9 nickases permits targeted knock-in without significant inhibition by p532019
- Author(s)
  Toshinori Hyodo, Md Lutfur Rahman, Atsushi Toyoda, Sivasundaram Karnan, Akinobu Ota, Shinobu Tuzuki, Yoshitaka Hosokawa, Hiroyuki Konishi
- Organizer
  Frontiers in Genome Engineering 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Mechanoreceptor-mediated temperature sensation in cold tolerance2019
- Author(s)
  Natsune Takagaki, Akane Ohta, Kohei Ohnishi, Yohei Minakuchi, Atsushi Toyoda, Yuichiro Fujiwara & Atsushi Kuhara
- Organizer
  22th C. elegans International conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 線虫C. elegansのメカノレセプターDEG-1を介した低温耐性の温度情報伝達2019
- Author(s)
  高垣菜式、太田茜、大西康平、水口洋平、豊田敦、久原篤
- Organizer
  第42回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Unveiling the molecular bases involved in another evolution of multicellular complexity in Astrephomene gubernaculifera2019
- Author(s)
  Yamashita, S., Suguchi, A., Yamamoto, Y., Matsuzaki, R., Kawachi, M., Noguchi, H., Minakuchi, Y., Toyoda, A., Hirono, M., Sekimoto, H. and Nozaki, H.
- Organizer
  The Fifth International Volvox Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] プリ属の性決定領域ゲノム配列比較2019
- Author(s)
  小山喬・車遥介・菊池潔・森島輝・豊田敦
- Organizer
  平成31年度日本水産学会春季大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] DNA二重鎖切断を介さない変異ノックイン法2019
- Author(s)
  兵頭寿典, Md Lutfur Rahman, 豊田敦, Sivasundaram Karnan, 太田明伸, 都築忍, 細川好孝, 小西裕之
- Organizer
  第42回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ボルボックスにおける性染色体領域の進化2019
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本植物形態学会第31回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Volvox属Merrillosphaera節における性染色体領域の拡大2019
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本藻類学会第43回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] イトマキヒトデのモデル生物化に向けて～イトマキヒトデのゲノム構築～2019
- Author(s)
  伊藤武彦, 梶谷嶺, 奥野未来, 田中裕之, 豊田敦, 立花和則, 岸本健雄
- Organizer
  第90回日本動物学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Mutation spectrum in the genome of offspring derived from irradiated mouse spermatogonia and mature oocytes2019
- Author(s)
  Yasunari Satoh, Mayumi Nishimura, Tony Kuo, Norio Shinkai, Harry M. Cullings, Yohei Minakuchi, Jun Sese, Atsushi Toyoda, Yoshiya Shimada, Nori Nakamura, Arikuni Uchimura
- Organizer
  日本放射線影響学会第62回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Toward molecular bases of photoheterotrophy in the colonial volvocine species Astrephomene gubernaculifera and Volvulina steinii2019
- Author(s)
  Suguchi, A., Yamashita, S., Matsuzaki, R., Suzuki, S., Yamaguchi, H., Kawachi, M., Noguchi, H., Minakuchi, Y., Toyoda, A. and Nozaki, H.
- Organizer
  The Fifth International Volvox Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ボルボックス系列緑藻における多細胞形質の平行進化の分子基盤の解明に向けて2019
- Author(s)
  山下翔大、数口敦紀、山本荷葉子、松﨑令、野口英樹、水口洋平、豊田敦、河地正伸、廣野雅文、関本弘之、野崎久義
- Organizer
  日本植物学会第83回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Genome sequence analysis on Ficus carica and F. erecta for the Ceratocystis canker resistance breeding programs in fig2019
- Author(s)
  Shirasawa K, Yakushiji H, Morita T, Jikumaru S, Ikegami H, Toyoda A, Hirakawa H, Isobe S
- Organizer
  VI International Symposium on Fig
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 接合藻ヒメミカヅキモにおける生殖様式の平行進化 : 全ゲノムデータから探る2019
- Author(s)
  川口也和子, 土金勇樹, 田中啓介, 太治輝昭, 豊田敦, 西山智明, 関本弘之, 土松隆志
- Organizer
  日本進化学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Novel natural products biosynthetic potential of the class Ktedonobacteria2019
- Author(s)
  Zheng, Y., Saito, A., Wang C. M., Toyoda, A., Minakuchi, Y., Sakai, Y., Abe, K., Yokota, A. and Yabe, S.
- Organizer
  The 8th FEMS Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] マウスの生殖系列で発生する挿入欠失変異の発生頻度とその特徴2018
- Author(s)
  内村有邦、樋口真弓、水口洋平、佐藤康成、辻隆弘、中本芳子、今中正明、三浦昭子、豊田敦、八木健
- Organizer
  日本放射線影響学会第61回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Both common and rare genetic variants of ABCG2 are risks for gout2018
- Author(s)
  Higashino T, Takada T, Nakaoka H, Toyoda Y, Stiburkova B, Miyata H, Ikebuchi Y, Nakashima H, Shimizu S, Kawaguchi M, Sakiyama M, Nakayama A, Akashi A, Tanahashi Y, Kawamura Y, Nakamura T, Wakai K, Okada R, Yamamoto K, Hosomichi K, Hosoya T, Ichida K, Ooyama H, Suzuki H, Inoue I, Merriman TR, Shinomiya N, Matsuo H.
- Organizer
  European Human Genetics Conference 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ホモタリック種ボルボックスの進化を比較ゲノム解析から探る2018
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
- Organizer
  日本植物形態学会第30回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 抗菌薬投与前後における乳幼児腸内フローラの機能メタゲノム解析2018
- Author(s)
  今大路治之、田中彩、下野隆、豊田敦、高見英人、桑原知己
- Organizer
  第12回日本ゲノム微生物学会　年会
- Data Source
  KAKENHI-PROJECT-15KT0039
[Presentation] 非病原性Rhizobium vitis VAR03-1株によるブドウ根頭がんしゅ病の病原性関連遺伝子の発現抑制機構の解析2018
- Author(s)
  石井智也・渡邉恵・齊藤晶・松井英譲・山本幹博・一瀬勇規・豊田和弘・川口章・能年義輝
- Organizer
  H30年度日本植物病理学会関西部会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] オニヒトデから見つかった謎の共在菌について2018
- Author(s)
  和田直久, 湯淺英知, 梶谷嶺, 後藤恭弘, 小椋義俊, 吉村大, 豊田敦, Sen-Lin TANG, 東村幸浩, Hugh SWEATMAN, Zac FORSMAN, Omri BRONSTEIN, Gal EYAL, Nalinee THONGTHAM, 林哲也, 伊藤武彦, 安田仁奈
- Organizer
  第21回日本サンゴ礁学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ホウレンソウの雄決定遺伝子座周辺から見出された組換抑制領域の分子構造2018
- Author(s)
  小野寺康之, 工藤友裕, 髙橋光彦, 長部高之, 豊田敦, 平川英樹, 鈴木穣, 近江戸伸子
- Organizer
  園芸学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 雌雄異株種・同株種ボルボックスの性染色体領域・相同領域における比較ゲノム解析2018
- Author(s)
  山本荷葉子、浜地貴志、豊岡博子、新垣陽子、野口英樹、豊田敦、水口洋平、野崎久義
- Organizer
  日本植物学会第82回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Y染色体リピート配列を巻き込んだ染色体構造異常症の次世代シーケンサーを用いた解析2018
- Author(s)
  稲垣秀人、加藤武馬、豊田敦、蒔田芳男、倉橋浩樹
- Organizer
  第41回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 「クテドノバクテリア(綱)」のゲノム解析が明かにした新規二次代謝産物生合成の潜在能力2018
- Author(s)
  鄭宇、豊田敦、水口洋平、王瓊渼、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  日本農芸化学会2018年度年次大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] COMPREHENSIVE EVALUATION OF THE EFFECTS OF RARE AND COMMON EXONIC ABCG2 VARIANTS ON GOUT SUSCEPTIBILITY2018
- Author(s)
  Toshihide Higashino, Tappei Takada, Hirofumi Nakaoka, Yu Toyoda, Blanka Stiburkova, Kenji Wakai, Hiroshi Ooyama, Ituro Inoue, Tony R, Merriman, Nariyoshi Shinomiya, Hirotaka Matsuo
- Organizer
  Annual European Congress of Rheumatology EULAR 2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ステロイド代謝酵素多型によるプリ属の遺伝的性決定機構2018
- Author(s)
  小山喬・中本正俊・森島輝・山下量平・山下雄史・佐々木皓平・水野直樹・車遥介・鈴木萌・家田梨櫻・内野翼・田角聡志・細谷将・宇野誠一・小山次朗・豊田敦・菊池潔・坂本崇
- Organizer
  日本分子生物学会第41回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 線虫の温度馴化多様性と低温馴化を制御するK+チャネルの解析2018
- Author(s)
  岡畑美咲、Aguan D. Wei、水口洋平、豊田敦、太田茜、久原篤
- Organizer
  温度生物学若手の会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Allium cepaにおける全ゲノム解読に向けた取り組みについて2018
- Author(s)
  執行正義・Mostafa Abdelrahman・佐藤修正・平川英樹・辻村真衣・寺地徹・豊田敦
- Organizer
  園芸学会平成30年度春季大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 非病原性Rhizobium vitis VAR03-1株によるブドウ根頭がんしゅ病の病原性関連遺伝子の発現抑制機構の解析2018
- Author(s)
  石井智也・渡邉恵・齊藤晶・松井英讓・山本幹博・一瀬勇規・豊田和弘・川口章・能年義輝
- Organizer
  第53回植物感染生理談話会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Human population history in the southwestern coastal region of the Sea of Okhotsk, inferred from ancient genome analysis2018
- Author(s)
  Takehiro Sato, Noboru Adachi, Ryosuke Kimura, Minoru Yoneda, Hiroki Oota, Atsushi Tajima, Atsushi Toyoda, Hiromi Matsumae, Kae Koganebuchi, Kentaro K. Shimizu, Tsunehiko Hanihara, Andrzej Weber, Hirofumi Kato, Hajime Ishida
- Organizer
  Society of Molecular Biology & Evolution 2018 Annual Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Turnover of sex chromosomes in Takifugu fish2018
- Author(s)
  Risa Ieda, Shota Tajima, Kazufumi Atsumi, Daigaku Fujikawa, Mana Sato, Yosuke Kuruma, Shun Ohki, Aoi Nozawa, Takashi Koyama, Satoshi Tasumi, Toyoda Atsushi, Sho Hosoya, Kiyoshi Kikuchi
- Organizer
  The 2018 International Symposium of Genetics in Aquaculture
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] クロマチン高次ドメイン構造分断機構の解明とiPS細胞におけるその応用2018
- Author(s)
  辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、林松彦、豊田敦、岡野栄之、菱川慶一
- Organizer
  第17回日本再生医療学会総会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Identification of Secondary Metabolites Gene Clusters in the Class Ktedonobacteria with Actinomycetes-Like-Morphology2018
- Author(s)
  Shuhei Yabe, Yu Zheng, Atsushi Toyoda, Yohei Minakuchi, Chang M. Wang, Yasuteru Sakai, Keietsu Abe, Akira Yokota
- Organizer
  ASM microbe 2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 機能メタゲノミクスで抗生剤投与が及ぼす乳児腸内細菌叢への影響を見る2018
- Author(s)
  高見英人、田中彩、下野隆一、豊田敦、荒井渉、今大路治之、多田雄哉、桑原知巳
- Organizer
  日本農芸化学会 2018年度大会
- Data Source
  KAKENHI-PROJECT-15KT0039
[Presentation] マウス生殖系列で発生するde novo変異から見る哺乳類ゲノムの進化2018
- Author(s)
  内村有邦、樋口真弓、水口洋平、松本拡高、若山清香、若山照彦、佐藤康成、福村龍太郎、辻隆弘、今中正明、中本芳子、三浦昭子、権藤洋一、豊田敦、八木健
- Organizer
  第41回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Transcriptome analysis identify genes involved in cold acclimation of C. elegans2017
- Author(s)
  Shiori Sakai, Mayu Fujita, Misaki Okanata, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
- Organizer
  分子生物学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 線虫の温度馴化に関わる自然多型遺伝子のマッピングとカリウムチャネルKQTの解析2017
- Author(s)
  岡畑美咲、太田茜、水口洋平、豊田敦、久原篤
- Organizer
  日本動物学会第88回年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 古代ゲノム解析から推定される北アジアの人類集団史2017
- Author(s)
  佐藤丈寛、安達登、木村亮介、米田穣、太田博樹、田嶋敦、豊田敦、松前ひろみ、小金渕佳江、清水健太郎、埴原恒彦、ウェーバー・アンジェイ、加藤博文、石田肇
- Organizer
  日本人類遺伝学会第62回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Tfap2c-Bmp7遺伝子座で互いに反目方向に並ぶ2つのCTCF結合クラスターは、クロマチンの隣接コンタクトドメインを分断し、かつ内部コンタクトパターンに関与する2017
- Author(s)
  辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、豊田敦、岡野栄之、菱川慶一
- Organizer
  第40回日本分子生物学会年会(ConBio2017)
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] WGSを用いた日本産野生マウス由来近交系MSM/Msにおける自然突然変異の検出2017
- Author(s)
  中井祐治、福村龍太郎、金相完、森一樹、門田雅代、目加田和之、田代康介、久原哲、吉木淳、豊田敦、藤山秋佐夫、権藤洋一
- Organizer
  NGS現場の会第5回研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Natural variations of cold acclimation and analysis of KQT potassium channel in cold acclimation2017
- Author(s)
  Misaki Okahata, Akane Ohta, Yohei Minakuchi, Atsushi Toyoda, Atsushi Kuhara
- Organizer
  21th C. elegans International conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Beta-oxidation of fatty acid metabolism through HADH is required for cold acclimation of C. elegans2017
- Author(s)
  Shiori Sakai, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
- Organizer
  日本比較生理生化学会年会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ショートリードを用いたりピート配列のde novo検出法の開発2017
- Author(s)
  田中良樹, 梶谷嶺, 豊田敦, 後藤友二, 久保田宗一郎, 伊藤武彦
- Organizer
  日本動物学会第88回富山大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 変異蓄積マウス系統は、放射線の遺伝影響を理解するための新たな方法論を提供する2017
- Author(s)
  内村有邦、樋口真弓、水口洋平、福村龍太郎、西野穣、豊田敦、権藤洋一、八木健
- Organizer
  日本放射線影響学会第60回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Genome-wide association study of clinically defined gout and subtypes identifies multiple susceptibility loci including transporter genes.2017
- Author(s)
  Hirotaka Matsuo, Nakayama Akiyoshi, Hirofumi Nakaoka, Ken Yamamoto, Masayuki Sakiyama, Amara Shaukat, Yu Toyoda, Yukinori Okada, Yoichiro Kamatani, Masahiro Nakatochi, Takahiro Nakamura, Tappei Takada, Katsuhisa Inoue, Hiroshi Nakashima, Seiko Shimizu, Kawaguchi Makoto, Asahi Hishida, Kenji Wakai, Blanka Stiburkova, Lisa K. Stamp, Nicola Dalbeth, Tatsuo Hosoya, Ituro Inoue, Atsushi Takahashi, Michiaki Kubo, Hiroshi Ooyama, Toru Shimizu, Kimiyoshi Ichida, Tony R. Merriman, Nariyoshi Shinomiya
- Organizer
  67th Annual Meeting of the American Society of Human Genetics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] オオムギの形質転換効率に関わる遺伝子単離に向けたDNAマーカー開発2017
- Author(s)
  久野裕1、宗森広美1、元井由加1、新海典夫2、瀬々潤2、豊田敦3、佐藤和広
- Organizer
  日本育種学会第131回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] NGSを使用した古人骨ゲノム解析-浜中2遺跡出土オホーツク文化人骨の研究事例-2017
- Author(s)
  佐藤丈寛、安達登、木村亮介、米田穣、太田博樹、田嶋敦、豊田敦、松前ひろみ、小金渕佳江、清水健太郎、埴原恒彦、ウェーバー・アンジェイ、加藤博文、石田肇
- Organizer
  NGS現場の会第5回研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Platanus2: a de novo haplotype assembler enabling comprehensive accesses to divergent heterozygous region.2017
- Author(s)
  梶谷嶺，吉村大，奥野未来，豊田敦，伊藤武彦
- Organizer
  第6回生命医薬情報学連合大会（IIBMP2017）
- Data Source
  KAKENHI-PROJECT-16H04719
[Presentation] 日本産野生マウス由来近交系MSM/Msにおける自然突然変異の検出2017
- Author(s)
  福村龍太郎, 中井祐治, 金相完, 森一樹, 門田雅世, 目加田和之, 田代康介, 久原哲, 吉木淳, 豊田敦, 藤山秋佐夫, 権藤洋
- Organizer
  遺伝学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 農耕地土壌における微生物代謝機能ポテンシャルの解析2017
- Author(s)
  藤村玲子、磯部一夫、豊田敦、竹本和広、荒井渉、妹尾啓史、高見英人
- Organizer
  環境微生物系学会合同学会2017
- Data Source
  KAKENHI-PROJECT-15KT0039
[Presentation] 日本産野生マウス由来近交系MSM/Msにおける自然発生突然変異の検出2017
- Author(s)
  福村龍太郎、中井祐治、金相完、森一樹、門田雅世、目加田和之、田代康介、久原哲、吉木淳、豊田敦、藤山秋佐夫、内村有邦、権藤洋一
- Organizer
  日本遺伝学会第89回大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Genetic analysis of natural variants and identification of novel genes for cold acclimation2017
- Author(s)
  Misaki Okahata, Iseki Toshihiro, Aguan D. Wei, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
- Organizer
  分子生物学会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] 変異蓄積マウス系統を用いた生殖系列変異の解析2017
- Author(s)
  内村有邦、樋口真弓、水口洋平、豊田敦、西野穣、八木健
- Organizer
  第42回中国地区放射線影響研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Isolation of genes required for cold acclimation2017
- Author(s)
  Mayu Fujita, Shiori Sakai, Misaki Okahata, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara.
- Organizer
  21th C. elegans International meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Detection and analysis of spontaneous mutations in the standard mouse strain by complete outbreeding.2017
- Author(s)
  Fukumura R, Kotaki H, Ishitsuka Y, Makino S, Nakai Y, Mori K, Toyoda A, Kuhara S, Fujiyama A, Gondo Y
- Organizer
  Advanced Geome Science International Symposium ; The Start of New Genomics.
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] WGSを用いた近交系マウスC57BL/JJclに生じる自然発生突然変異/SNV検出と公開2017
- Author(s)
  福村龍太郎、小瀧逸人、石塚祐一、牧野茂、中井祐治、森一樹、久原哲、豊田敦、藤山秋佐夫、権藤洋一
- Organizer
  NGS現場の会第5回研究会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Apoptotic signaling regulates temperature tolerance in nervous system2017
- Author(s)
  Tomoyo Ujisawa, Akane Ohta, Tatsuya Li, Yohei Minakuchi, Katsushi Arisaka, Atsushi Toyoda, Miki Ii, Atsushi Kuhara
- Organizer
  第40回日本神経科学大会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Detection and analysis of spontaneous mutations in the C57BL/6JJcl strain by complete outbreeding.2017
- Author(s)
  Fukumura R, Ishitsuka Y, Makino S, Nakai Y, Mori K, Toyoda A, Kuhara S, Fujiyama A, Gondo Y
- Organizer
  The 12th International Workshop on Advanced Genomics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ゲノム編集処理世代マダイの変異スペクトラム解析2016
- Author(s)
  岸本謙太・鷲尾洋平・安斎賢・村上悠・豊田敦・吉浦康寿・家戸敬太郎・木下政人
- Organizer
  日本水産学会
- Place of Presentation
  東京海洋大学
- Year and Date
  2016-03-26
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] 南極にみる遺伝子の水平伝播ワールド2016
- Author(s)
  馬場知哉, 阿部貴志, 豊田敦, 中井亮佑, 長沼毅, 藤山秋佐夫 , 神田啓史, 本山秀明, 伊村智, 仁木宏典
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜（神奈川県、横浜市）
- Year and Date
  2016-11-30
- Invited
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Environmental adaptation of polar bacteria;‘To be, or not to be frozen.’2016
- Author(s)
  Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  第10回日本ゲノム微生物学会年会
- Place of Presentation
  東京工業大学（東京都、目黒区）
- Year and Date
  2016-03-04
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] ゲノム編集マダイの生殖細胞系列の変異2016
- Author(s)
  岸本謙太・鷲尾洋平・豊田敦・吉浦康寿・家戸敬太郎・木下政人
- Organizer
  日本水産学会秋季大会
- Place of Presentation
  近畿大学農学部
- Year and Date
  2016-09-08
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] ゲノム編集による海水養殖魚の品種改良とその産業化に向けた課題2016
- Author(s)
  家戸敬太郎・鷲尾洋平・安齋　賢・豊田　敦・吉浦康寿・黒柳美和・片山貴士・今井　正・岸本謙太・村上　悠・木下政人
- Organizer
  日本水産学会秋季大会
- Place of Presentation
  近畿大学農学部
- Year and Date
  2016-09-08
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] ゲノム編集技術の養殖業への応用2016
- Author(s)
  木下政人・岸本謙太・鷲尾洋平・豊田敦・吉浦康寿・家戸敬太郎
- Organizer
  日本水産学会秋季大会
- Place of Presentation
  近畿大学農学部
- Year and Date
  2016-09-08
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] ゲノム編集技術CRISPR/Cas9を用いた筋肉増量マダイ系統の作出2016
- Author(s)
  岸本謙太,鷲尾洋平, 豊田敦, 吉浦康寿, 家戸敬太郎, 木下政人
- Organizer
  日本水産学会近畿支部会
- Place of Presentation
  京都大学農学部
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] Increment of Skeletal Muscle Mass by CRISPR/Cas9 Genome Editing System in Red Sea Bream (Pagrus major)2016
- Author(s)
  K. Kato, K. Kishimoto, Y. Washio, A. Toyoda, Y. Yoshiura, M. Kinoshita
- Organizer
  12th Japan-Korea Korea-Japan Joint Symposium on Aquaculture
- Place of Presentation
  三重大学
- Year and Date
  2016-11-03
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] INCREMENT OF SKELETAL MUSCLE MASS BY CRISPR/CAS9 GENOME EDITTING SYSTEM IN RED SEA BREAM (PAGRUS MAJOR)2016
- Author(s)
  K. Kato, K. Kishimoto, Y. Washio, A. Toyoda, Y. Yoshiura, M. Kinoshita
- Organizer
  Aquaculture Europe 16
- Place of Presentation
  Edinburgh International Conference Centre
- Year and Date
  2016-09-20
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] ゲノム編集技術の水産業への応用ーメダカからマダイ・トラフグへー2016
- Author(s)
  岸本謙太, 安齋賢, 豊田敦, 吉浦康寿, 家戸敬太郎, 木下政人
- Organizer
  ゲノム編集学会
- Place of Presentation
  広島国際会議場
- Year and Date
  2016-09-06
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] ゲノム編集マダイのF1作出2016
- Author(s)
  鷲尾洋平・大濱光希・岸本謙太・豊田敦・吉浦康寿・木下政人・家戸敬太郎
- Organizer
  日本水産学会秋季大会
- Place of Presentation
  近畿大学農学部
- Year and Date
  2016-09-08
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] Genomic Evolutions of Polar Bacteria2015
- Author(s)
  Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  The 6th Symposium on Polar Science
- Place of Presentation
  国立極地研究所（東京都、立川市）
- Year and Date
  2015-11-16
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] マダイ・トラフグにおけるマイクロインジェクション法の最適化2015
- Author(s)
  岸本謙太・鷲尾洋平・安斎賢・村上悠・黒柳美和・片山貴士・今井正・豊田敦・吉浦康寿・家戸敬太郎・木下政人
- Organizer
  日本水産学会
- Place of Presentation
  東北大学
- Year and Date
  2015-09-22
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] Genetic analysis of natural variations for cold habituation in C. elegans2015
- Author(s)
  Misaki Okahata, Akane Ohta, Yohei Minakuchi, Atsushi Toyoda, Atsushi Kuhara
- Organizer
  20th C. elegans International meeting
- Place of Presentation
  Los Angels, USA
- Year and Date
  2015-06-24
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] CRISPR/Cas9 を用いた筋肉増量マダイの作製2015
- Author(s)
  岸本謙太・吉浦康寿・豊田敦・家戸敬太郎・木下政人
- Organizer
  平成２７年度日本水産学会春期大会
- Place of Presentation
  東京海洋大学
- Year and Date
  2015-03-30
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] 納豆菌ゲノムのPacBioシークエンシングと高精度配列の再決定．2015
- Author(s)
  鎌田真由美，長谷純崇，木村啓太郎，佐藤健吾，豊田敦，藤山秋佐夫，榊原康文
- Organizer
  第８回日本ゲノム微生物学会年会
- Place of Presentation
  東京農業大学
- Year and Date
  2015-03-07
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 北極・南極Pseudomonas属細菌のゲノムレベルでの低温環境適応2014
- Author(s)
  馬場知哉、阿部貴志、豊田敦、中井亮佑、長沼毅、藤山秋佐夫、伊村智、神田啓史、本山秀明、仁木宏典
- Organizer
  第８回　日本ゲノム微生物学会　年会
- Place of Presentation
  東京農業大学（東京都世田谷区）
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] ヒメミカヅキモの－型細胞特異的遺伝子CpMinus1の解析2014
- Author(s)
  小宮あゆみ、阿部淳、川井絢子、鈴木穣、豊田敦、藤山秋佐夫、大槻涼、土金勇樹、西山智明、関本弘之
- Organizer
  第55回日本植物生理学会年会
- Place of Presentation
  富山大学　五福キャンパス
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Genome Sequencing of the Charophycean Green Alga, Chara braunii2014
- Author(s)
  Tomoaki Nishiyama, Atsushi Toyoda, Yutaka Suzuki, Asao Fujiyama, Hidetoshi Sakayama
- Organizer
  Plant and Animal Genome XXII Conference, 2014
- Place of Presentation
  San Diego, USA
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] シャジクモのゲノム解読2014
- Author(s)
  西山智明, 豊田敦, 鈴木穣, 藤山秋佐夫, 坂山英俊
- Organizer
  植物分類学会
- Place of Presentation
  熊本
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 第3 世代1 分子シークエンサーによる新規大型ゲノム解読2014
- Author(s)
  藤山秋佐夫、野口英樹、豊田敦
- Organizer
  日本人類遺伝学会
- Place of Presentation
  東京都江戸川区（タワーホール船堀）
- Year and Date
  2014-11-21
- Invited
- Data Source
  KAKENHI-PROJECT-25250024
[Presentation] 陸上植物に近縁な緑色藻類シャジクモのゲノム解読2014
- Author(s)
  西山智明, 豊田敦, 鈴木穣, 藤山秋佐夫, 坂山英俊
- Organizer
  第55回日本植物生理学会年会
- Place of Presentation
  富山大学　五福キャンパス
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 土壌微生物の移植メタゲノム2014
- Author(s)
  加藤広海, 森宙史, 丸山史人, 豊田敦, 大坪嘉行, 永田裕二, 藤山秋佐夫, 黒川顕, 津田雅孝
- Organizer
  第8回日本ゲノム微生物学会年会
- Place of Presentation
  東京農業大学　世田谷キャンパス
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] ゲノム編集技術を用いたマダイ品種開発の試み2014
- Author(s)
  岸本謙太・吉浦康寿・豊田敦・家戸敬太郎・木下政人
- Organizer
  平成２６年度日本水産学会秋季大会
- Place of Presentation
  九州大学
- Year and Date
  2014-09-21
- Data Source
  KAKENHI-PROJECT-26292104
[Presentation] Asian Microbiome Project: 次世代シーケンサーを用いたアジア人腸内細菌叢のプロファイル化2014
- Author(s)
  東佳那子、百田理恵、山本麻寿紗、林哲也、小椋義俊、黒川顕、豊田敦、加藤和人、AMP study group、園元謙二、渡辺幸一、Lee Yuan Kun、中山二郎
- Organizer
  日本生物工学会　第21回九州支部熊本大会
- Place of Presentation
  熊本大学
- Year and Date
  2014-12-06
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DNA replication errors that fuel genetic and phenotypic diversities in mammals2014
- Author(s)
  Arikuni Uchimura, Mayumi Higuchi, Yohei Minakuchi, Atsushi Toyoda, Asao Fujiyama, Ikuo Miura, Shigeharu Wakana, Takeshi Yagi
- Organizer
  国際シンポジウム "Germline Mutagenesis and Biodiversification”
- Place of Presentation
  九州大学(病院キャンパス) 総合研究棟1階セミナー室105
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] ヒラアオノリ配偶子の一過的形質転換系による葉緑体とミトコンドリアの可視化とその動態2014
- Author(s)
  鈴木亮吾，伊藤寛，尾関海，余哲，山崎誠和，豊田敦，桑野和可，河野重行
- Organizer
  日本藻類学会第38回大会
- Place of Presentation
  東邦大学理学部
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Linking Body Size to Morphology of Neuronal Dendritic Arbors in Adults2013
- Author(s)
  T. Uemura, K. Shimono, T. Nomura, T. Usui, H. Komai, A. Toyoda
- Organizer
  2013 American Society for Cell Biology (ASCB) Annual Meeting
- Place of Presentation
  New Orleans, USA
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 高い放射線耐性を示すヨコヅナクマムシの新規クロマチンタンパク質S261の同定と解析2013
- Author(s)
  橋本拓磨、斎藤裕樹、尾山大明、秦裕子、桑原宏和、堀川大樹、豊田敦、片山俊明、荒川和晴、藤山秋佐夫、久保健雄、國枝武和
- Organizer
  第36回日本分子生物学会年会
- Place of Presentation
  神戸ポートアイランド
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 重症度の差異を認めたレット症候群の一卵性双生児のゲノム・エピゲノム比較解析2013
- Author(s)
  久保田健夫、三宅邦夫、水口洋平、伊藤雅之、後藤雄一、豊田敦
- Organizer
  日本人類遺伝学会第58回大会
- Place of Presentation
  宮城県仙台市　江陽グランドホテル
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] ヨコヅナクマムシにおける新規ミトコンドリアタンパク質の同定2013
- Author(s)
  田中冴、秦裕子、尾山大明、豊田敦、片山俊明、荒川和晴、藤山秋佐夫、久保健雄、國枝武和
- Organizer
  細胞を創る研究会
- Place of Presentation
  鶴岡メタボロームキャンパスレクチャーホール鶴岡市先端研究産業支援センター
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 陸上植物に近縁な藻類シャジクモのゲノム解読2013
- Author(s)
  西山智明，豊田敦, 鈴木穣, 藤山秋佐夫, 坂山英俊
- Organizer
  植物学会
- Place of Presentation
  札幌
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Deep Exome Sequencing in Macaque Monkeys for the Establishment of Primate Cognitive and Psychiatric Disease Model2013
- Author(s)
  Yasuhiro Go, Atsushi Toyoda, Tomoyuki Aizu, Hiroo Imai, Hirohisa Hirai, Tetsuo Yamamori, Asao Fujiyama, Tadashi Isa
- Organizer
  The 24th CDB meeting Genomics and Epigenomics with Deep Sequencing
- Place of Presentation
  Kobe, JAPAN
- Data Source
  KAKENHI-PROJECT-24650234
[Presentation] ヨコヅナクマムシの新規クロマチンタンパク質S261による DNA 断片化の抑制2013
- Author(s)
  橋本拓磨、斎藤裕樹、尾山大明、秦裕子、桑原宏和、堀川大樹、豊田敦、片山俊明、荒川和晴、藤山秋佐夫、久保健雄、國枝武和
- Organizer
  極限環境生物学会
- Place of Presentation
  明治大学生田キャンパス
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 陸上植物に近縁な藻類シャジクモのゲノム解読2013
- Author(s)
  西山智明，豊田敦, 鈴木穣, 藤山秋佐夫, 坂山英俊
- Organizer
  北陸植物学会
- Place of Presentation
  金沢
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 高い突然変異率が後世代の哺乳類集団に及ぼす影響2013
- Author(s)
  内村有邦、樋口真弓、豊田敦、藤山秋佐夫、三浦郁生、若菜茂晴、八木健
- Organizer
  日本遺伝学会第85回大会
- Place of Presentation
  慶應義塾大学日吉キャンパス
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 乾眠能力をもつヨコヅナクマムシにおける新規ミトコンドリアタンパク質の同定2013
- Author(s)
  S. Tanaka, H. Kozuka-Hata, A. Toyoda, T. Katayama, K. Arakawa, A. Fujiyama, M.Oyama, T. Kubo and T. Kunieda
- Organizer
  第36回日本分子生物学会年会
- Place of Presentation
  神戸ポートアイランド
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Identification of novel mitochondrial proteins from an anhydrobiotic tardigrade2013
- Author(s)
  S. Tanaka, A. Toyoda, T. Katayama, K. Arakawa, A. Fujiyama, T. Kubo and T. Kunieda
- Organizer
  DynaMito2013, the 4th International Symposium on Dynamics of Mitochondria
- Place of Presentation
  Okinawa
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] ポリプテルスにおける補体C4,B因子遺伝子ゲノム領域の構造解析2013
- Author(s)
  呉谷文、藤戸尚子、豊田敦、藤山秋佐夫、野中勝
- Organizer
  第36回日本分子生物学会年会
- Place of Presentation
  神戸ポートアイランド
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] ゼブラフィッシュ近交系IM系統の遺伝的評価2013
- Author(s)
  新屋みのり、中谷明弘、豊田敦、藤山秋佐夫、酒井則良
- Organizer
  日本遺伝学会第85回大会
- Place of Presentation
  慶應義塾大学日吉キャンパス
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Bacterial Genome-wide Adaptation to a Lake Environment in East Antarctica2013
- Author(s)
  Tomoya BABA, Takashi ABE, Atsushi TOYODA, Kentaro FUKUTA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  第10回　SCAR (Scientific Committee on Antarctic Research)　生物学シンポジウム
- Place of Presentation
  スペイン、バルセロナ
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] 第二・第三世代の配列決定技術の現状2013
- Author(s)
  豊田敦
- Organizer
  第86回日本細菌学会ワークショップ
- Place of Presentation
  幕張メッセ
- Invited
- Data Source
  KAKENHI-PLANNED-22129003
[Presentation] 第二・第三世代の配列決定技術の現状2013
- Author(s)
  豊田敦
- Organizer
  第86回日本細菌学会ワークショップ「使ってみよう次世代シーケンサー」
- Place of Presentation
  千葉
- Year and Date
  2013-03-19
- Invited
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Molecular mechanisms controlling size of neuronal dendritic arbors2013
- Author(s)
  K. Shimono, T. Nomura, T. Usui, H. Komai, A. Toyoda, T. Uemura
- Organizer
  第36回日本分子生物学会年会
- Place of Presentation
  神戸ポートアイランド
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] ヨコヅナクマムシにおける新規ミトコンドリアタンパク質の同定2013
- Author(s)
  田中冴、秦裕子、尾山大明、豊田敦、片山俊明、荒川和晴、藤山秋佐夫、久保健雄、國枝武和
- Organizer
  極限環境生物学会
- Place of Presentation
  明治大学生田キャンパス
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Deep exome sequencing in macaque monkeys for the establishment of primate cognitive and psychiatric disease model.2013
- Author(s)
  Yasuhiro Go, Atsushi Toyoda, Tomoyuki Aizu, Hiroo Imai, Hirohisa Hirai, Tetsuo Yamamori, Asao Fujiyama, Tadashi Isa
- Organizer
  The 24th CDB meeting Genomics and Epigenomics with Deep Sequencing
- Place of Presentation
  理化学研究所　発生・再生科学総合研究センター（神戸市中央区）
- Data Source
  KAKENHI-PROJECT-24650234
[Presentation] Exomeデータを利用した霊長類の嗅覚受容体遺伝子の比較解析2012
- Author(s)
  松井淳、郷康広、豊田敦、会津智幸、石崎比奈子、今井啓雄、藤山秋佐夫、平井啓久、新村芳人
- Organizer
  日本進化学会第14回大会
- Place of Presentation
  東京
- Year and Date
  2012-08-23
- Data Source
  KAKENHI-PROJECT-24650234
[Presentation] No evidence of genetic difference for clinical severity between monozygotic twins with Rett syndrome.2012
- Author(s)
  Kubota T, Miyake K, Hirasawa T, Minakuchi Y, Toyoda A.
- Organizer
  The American society of Human Genetics 62nd Annual Meeting
- Place of Presentation
  サンフランシスコ国際会議場（米国）
- Data Source
  KAKENHI-PROJECT-23659519
[Presentation] チンパンジーパーソナルゲノム研究2012
- Author(s)
  郷康広、辰本将司、豊田敦、西村理、友永雅己、平井啓久、松沢哲郎、藤山秋佐夫、阿形清和
- Organizer
  第28回日本霊長類学会大会
- Place of Presentation
  名古屋
- Year and Date
  2012-07-07
- Data Source
  KAKENHI-PROJECT-24650234
[Presentation] 次世代シークエンサーを用いた全ゲノム解析2010
- Author(s)
  豊田敦
- Organizer
  日本人類遺伝学会第55回大会
- Place of Presentation
  大宮ソニックシティホール
- Year and Date
  2010-10-30
- Data Source
  KAKENHI-PROJECT-21310126
[Presentation] 次世代シークエンサーを用いた全ゲノム解析2010
- Author(s)
  豊田敦
- Organizer
  日本人類遺伝学会第55回大会
- Place of Presentation
  大宮ソニックシティホール大ホール
- Year and Date
  2010-10-30
- Data Source
  KAKENHI-PLANNED-22129003
[Presentation] 次世代シークエンサーを用いた全ゲノム解析2010
- Author(s)
  豊田敦
- Organizer
  日本人類遺伝学会第55回大会
- Place of Presentation
  大宮ソニックシティホール大ホール
- Year and Date
  2010-10-30
- Data Source
  KAKENHI-PROJECT-21310126
[Presentation] 次世代シークエンシングシステムとゲノム解析2009
- Author(s)
  豊田敦
- Organizer
  かずさDNA研究所ワークショップ「遺伝的多様性に基づく有用遺伝子座の探索」
- Place of Presentation
  かずさDNA研究所(木更津)
- Year and Date
  2009-03-25
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] 次世代シーケンシングがもたらす比較ゲノム研究の進展2009
- Author(s)
  藤山秋佐夫, 豊田敦, 黒木陽子
- Organizer
  第32回日本分子生物学会
- Place of Presentation
  横浜国際会議場、横浜市
- Year and Date
  2009-12-10
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] 超高速シークエンスシステムを用いたゲノム解析2009
- Author(s)
  豊田敦
- Organizer
  日本農芸化学会2009年度大会
- Place of Presentation
  福岡
- Year and Date
  2009-03-29
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] ゲノム解析が明らかにしたシロアリ腸内原生生物細胞内共生細菌の空中窒素固定能2009
- Author(s)
  本郷裕一、Vineet K. Sharma、Tulika Prakash、榊佳之、豊田敦、服部正平、大熊盛也
- Organizer
  第3回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Year and Date
  2009-03-05
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] 次世代シークエンシングシステムとゲノム解析2009
- Author(s)
  豊田敦
- Organizer
  かずさDNA研究所ワークショップ「遺伝的多様性に基づく有用遺伝子座の探索」
- Place of Presentation
  かずさDNA研究所(木更津)〈千葉〉
- Year and Date
  2009-03-25
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] 超高速シークエンスシステムを用いたゲノム解析2009
- Author(s)
  豊田敦
- Organizer
  日本農芸化学会2009年度大会
- Place of Presentation
  福岡
- Year and Date
  2009-03-29
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] ゲノム解析が明らかにしたシロアリ腸内原生生物細胞内共生細菌の空中窒素固定能2009
- Author(s)
  本郷裕元、Vineet K. Sharma、 Tulika Prakash、榊佳之、豊田敦、服部正平、大熊盛也
- Organizer
  第3回日本ゲノム微生物学会年会
- Place of Presentation
  東京
- Year and Date
  2009-03-05
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] 次世代シーケンシングがもたらす比較ゲノム研究の進展2009
- Author(s)
  藤山秋佐夫, 豊田敦, 黒木陽子
- Organizer
  第32回日本分子生物学会
- Place of Presentation
  横浜国際会議場、横浜市
- Year and Date
  2009-12-10
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] 次世代シークエンスシステムを用いたゲノム解析2008
- Author(s)
  豊田敦
- Organizer
  特定領域研究「比較ゲノム」情報系研究会
- Place of Presentation
  福岡
- Year and Date
  2008-06-13
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] Short Readシーケンサーによるゲノム解析2008
- Author(s)
  豊田敦
- Organizer
  第3回バイオインフォマティクス研究者と医学研究者の交流会
- Place of Presentation
  柏(千葉)
- Year and Date
  2008-11-22
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] Effect of hyper-parallel sequencers on comparative genomics2008
- Author(s)
  Asao Fujiyama, Atsushi Toyoda, Yoko Kuroki, Tadasu Shin-I, Yuji Kohara
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] Comparative analysis of glutamate receptor gene family between human and chimpanzee2008
- Author(s)
  Hiroki Shibata, Hiroki Goto, Kazunori Watanabe, Yoko Kuroki, Atsushi Toyoda, Masahira Hattori, Yoshiyuki Sakaki, Asao Fujiyama, Yasuyuki Fukumaki
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] オキゴンドウMHC領域のゲノム配列決定と比較ゲノム解析2008
- Author(s)
  渡辺舞, 細道一善, 野口英樹, 黒木陽子, 豊田敦, 田中彰, 猪子英俊, 藤山秋佐夫, 椎名隆
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] Effect of hyper-parallel sequencers on comparative genomics2008
- Author(s)
  Asao Fujiyama, Atsushi Toyoda, Yoko Kuroki, Tadasu Shin-I, Yuji Kohara
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] Comprehensive analyses of Y chromosomes toward understanding of the male-specific genome functions2008
- Author(s)
  Yoko Kuroki, Atsushi Toyoda, Shouji Tatsumoto, Yoshiyuki Sakaki and Asao Fujiyama
- Organizer
  2008 Cold Spring Harbor Laboratory Meeting on the Biology of Genomes
- Place of Presentation
  Cold Spring Harbor, USA
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] Comprehensive analyses of Y chromosomes toward understanding of the male-specific genome functions2008
- Author(s)
  Yoko Kuroki, Atsushi Toyoda, Shouji Tatsumoto, Yoshiyuki Sakaki and Asao Fujiyama
- Organizer
  2008 Cold Spring Harbor Laboratory Meeting on the Biology of Genomes
- Place of Presentation
  Cold Spring Harbor, USA
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] 立襟鞭毛虫Monosiga ovataゲノムプロジェクト : II. 動物の初期進化における遺伝子多様化2008
- Author(s)
  岩部直之, 隈啓一, 加藤和貴, 藤博幸, 廣瀬希, 佐々木剛, 菅裕, 宮田隆, 鈴木穣, 笠原雅弘, 新井理, 大石加寿子, 鹿児島浩, 豊田敦, 黒木陽子, 菅野純夫, 森下真一, 小原雄治, 藤山秋佐夫
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] オキゴンドウMHC領域のゲノム配列決定と比較ゲノム解析2008
- Author(s)
  渡辺舞, 細道一善, 野口英樹, 黒木陽子, 豊田敦, 田中彰, 猪子英俊, 藤山秋佐夫, 椎名隆
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] 立襟鞭毛虫Monosiga ovataゲノムプロジェクト : I. ゲノム2008
- Author(s)
  隈啓一, 岩部直之, 加藤和貴, 藤博幸, 廣瀬希, 菅裕, 宮田隆, 鈴木穣, 笠原雅弘, 新井理, 大石加寿子, 鹿児島浩, 豊田敦, 黒木陽子, 菅野純夫, 森下真一, 小原雄治, 藤山秋佐夫
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] 立襟鞭毛虫Monosiga ovataゲノムプロジェクト : I. ゲノム2008
- Author(s)
  隈啓一, 岩部直之, 加藤和貴, 藤博幸, 廣瀬希, 菅裕, 宮田隆, 鈴木穣, 笠原雅弘, 新井理, 大石加寿子, 鹿児島浩, 豊田敦, 黒木陽子, 菅野純夫, 森下真一, 小原雄治, 藤山秋佐夫
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] Comparative analysis of glutamate receptor gene family between human and chimpanzee2008
- Author(s)
  Hiroki Shibata, Hiroki Goto, Kazunori Watanabe, Yoko Kuroki, Atsushi Toyoda, Masahira Hattori, Yoshiyuki Sakaki, Asao Fujiyama, Yasuyuki Fukumaki
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] Short Readシーケンサーによるゲノム解析2008
- Author(s)
  豊田敦
- Organizer
  第3回バイオインフォマティクス研究者と医学研究者の交流会
- Place of Presentation
  柏(千葉)
- Year and Date
  2008-11-22
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] Complete genome of the uncultured "Termite Group 1" bacteria in a single host protist cell2008
- Author(s)
  Y. Hongoh, V. K. Sharma, T. Prakash, A. Toyoda, M. Hattori, M. Ohkuma
- Organizer
  The 12th International Symposium on Microbial Ecology (ISME12)
- Place of Presentation
  Cairns, Australia
- Year and Date
  2008-08-17
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] 立襟鞭毛虫Monosiga ovataゲノムプロジェクト : II. 動物の初期進化における遺伝子多様化2008
- Author(s)
  岩部直之, 隈啓一, 加藤和貴, 藤博幸, 廣瀬希, 佐々木剛, 菅裕, 宮田隆, 鈴木穣, 笠原雅弘, 新井理, 大石加寿子, 鹿児島浩, 豊田敦, 黒木陽子, 菅野純夫, 森下真一, 小原雄治, 藤山秋佐夫
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会(BMB2008)
- Place of Presentation
  神戸(兵庫)
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] 次世代シークエンスシステムを用いたゲノム解析2008
- Author(s)
  豊田敦
- Organizer
  特定領域研究「比較ゲノム」情報系研究会
- Place of Presentation
  福岡
- Year and Date
  2008-06-13
- Data Source
  KAKENHI-PROJECT-17018030
[Presentation] ヒト腸内常在大腸菌のゲノム解析2007
- Author(s)
  藤英博、豊田, 他8名
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-11
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] マウス卵における内在性SiRNAの生合成経路と機能2007
- Author(s)
  渡部聡郎、豊田敦, 他4名
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-11
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] マウス初期胚におけるマイクロRNAの変化2007
- Author(s)
  大西悠亮、豊田敦, 他4名
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-11
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] マーモセットの遺伝子発現頻度の組織別比較解析2007
- Author(s)
  十時泰、豊田敦, 他10名
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-12
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] コモンマーモセットESTの解析から見た塩基置換における組織特異性2007
- Author(s)
  足立直樹,豊田敦, 他10名
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-12
- Data Source
  KAKENHI-PROJECT-17018031
[Presentation] Biosphere of an Antarctic Lake as a Natural Laboratory of Biological Evolutions
- Author(s)
  1.Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  第5回極域科学シンポジウム
- Place of Presentation
  国立極地研究所（東京都、立川市）
- Year and Date
  2014-12-02 – 2014-12-05
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Incorporation of Long-Read Technologies into Hybrid-de novo Genome Sequencing Strategy: An Assessment on PacBio and Moleculo Read
- Author(s)
  Asao Fujiyama, Masahiro Kasahara, Atsushi Toyoda
- Organizer
  PLANT & ANIMAL GENOME ASIA 2014
- Place of Presentation
  SINGAPORE
- Year and Date
  2014-05-19 – 2014-05-21
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 有殻アメーバ Paulinella chromatophora のゲノム解析
- Author(s)
  松尾充啓, 潟端篤, 水口洋平, 野口英樹, 豊田敦, 藤山秋佐夫, 鈴木穣, 佐藤壮一郎, 松崎素道, 中山卓郎, 神川龍馬, 野村真未, 壁谷如洋, 宮城島進也, 稲垣祐司, 石田健一郎, 小保方潤一
- Organizer
  第37回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2014-11-25 – 2014-11-27
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 放射線耐性を示すクマムシの新規タンパク質S261によるDNA損傷の抑制
- Author(s)
  橋本拓磨, 斎藤裕樹, 尾山大明, 秦裕子, 榎本敦, 宮川清, 桑原宏和, 堀川大樹, 豊田敦, 片山俊明, 荒川和晴, 藤山秋佐夫, 久保健雄, 國枝武和
- Organizer
  第37回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2014-11-25 – 2014-11-27
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] マウス長期継代系統を用いた生殖系列突然変異率の閾値とその影響
- Author(s)
  内村有邦, 樋口真弓, 水口洋平, 西野穣, 豊田敦, 藤山秋佐夫, 八木健
- Organizer
  日本環境変異原学会第43回大会
- Place of Presentation
  一橋大学一橋講堂
- Year and Date
  2014-12-04 – 2014-12-05
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 大規模全ゲノムシーケンシングによるニホンザルの種特異的ゲノム情報の探索
- Author(s)
  福多賢太郎，野口英樹，豊田敦，長田直樹，郷康弘，石田貴文，伊佐正，藤山秋佐夫
- Organizer
  日本霊長類学会
- Place of Presentation
  大阪市西区（大阪科学技術センター）
- Year and Date
  2014-07-04 – 2014-07-06
- Data Source
  KAKENHI-PROJECT-25250024
[Presentation] The Chara braunii Genome Sheds Light on the Origin of Land Plants
- Author(s)
  Hidetoshi Sakayama, Atsushi Toyoda, Yutaka Suzuki, Asao Fujiyama, Stefan A. Rensing, Tomoaki Nishiyama
- Organizer
  Plant and Animal Genome XXIII Conference, 2015
- Place of Presentation
  San Diego, CA
- Year and Date
  2015-01-10 – 2015-01-14
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 長期継代マウス系統を用いた突然変異率の推定と新しい遺伝学
- Author(s)
  内村有邦, 樋口真弓, 水口洋平, 西野穣, 豊田敦, 藤山秋佐夫, 三浦郁生, 若菜茂晴, 八木健
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜バイオ大学
- Year and Date
  2014-09-17 – 2014-09-19
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] The Chara braunii Genome
- Author(s)
  Tomoaki Nishiyama, Atsushi Toyoda, Yutaka Suzuki, Asao Fujiyama, Stefan A. Rensing, Hidetoshi Sakayama
- Organizer
  Plant and Animal Genome XXIII Conference, 2015
- Place of Presentation
  San Diego, CA
- Year and Date
  2015-01-10 – 2015-01-14
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Incorporation of Long-Read Technologies into Hybrid-de novo Genome Sequencing Strategy: An Assessment on PacBio and Moleculo Read
- Author(s)
  A. Fujiyama, M. Kasahara, A. Toyoda
- Organizer
  PLANT & ANIMAL GENOME ASIA 2014
- Place of Presentation
  SINGAPORE
- Year and Date
  2014-05-19 – 2014-05-21
- Data Source
  KAKENHI-PLANNED-22129003
[Presentation] アオサ藻綱ヒラアオノリのゲノム解読と雌雄ゲノムの比較による性決定領域の探索
- Author(s)
  山﨑誠和, 鈴木亮吾, 市原健介, 豊田敦, 桑野和可, 鈴木穣, 河野重行
- Organizer
  日本藻類学会第39回大会
- Place of Presentation
  九州大学
- Year and Date
  2015-03-20 – 2015-03-25
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 南極の湖沼生物圏における遺伝子の水平伝播ワールド
- Author(s)
  2.馬場知哉、阿部貴志、豊田敦、中井亮佑、長沼毅、藤山秋佐夫、伊村智、神田啓史、本山秀明、仁木宏典
- Organizer
  第9回日本ゲノム微生物学会年会
- Place of Presentation
  神戸大学（兵庫県、神戸市）
- Year and Date
  2015-03-06 – 2015-03-08
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] Mutations in ERBB4 That Disrupt The NRG-ErbB4 Pathway Cause Autosomal Dominant Familial ALS Type 19
- Author(s)
  Y. Takahashi, Y. Fukuda, J. Yoshimura, A. Toyoda, K. Kurppa, H. Moritoyo, V. Belzil, K. Elenius, G. Rouleau, A. Fujiyama, S. Morishita, J. Goto, S. Tsuji
- Organizer
  American Academy of Neurology
- Place of Presentation
  Philadelphia, PA
- Year and Date
  2014-04-26 – 2014-05-03
- Data Source
  KAKENHI-PLANNED-22129003
[Presentation] Bacterial Genome-wide Horizontal Gene-transfers Provide Co-evolution and Adaptation Strategies of Biosphere in Ultra-oligotrophic Antarctic Lake
- Author(s)
  1.Tomoya BABA, Takashi ABE, Atsushi TOYODA, Ryosuke NAKAI, Takeshi NAGANUMA, Asao FUJIYAMA, Satoshi IMURA, Hiroshi KANDA, Hideaki MOTOYAMA, Hironori NIKI
- Organizer
  2014 SCAR Open Science Conference
- Place of Presentation
  Auckland, New Zealand
- Year and Date
  2014-08-25 – 2014-08-28
- Data Source
  KAKENHI-PROJECT-24310150
[Presentation] シャジクモゲノムにみる陸上植物の制御因子ホモログ
- Author(s)
  西山智明, 豊田敦, 鈴木穣, 藤山秋佐夫, 坂山英俊
- Organizer
  日本植物学会第78回大会
- Place of Presentation
  明治大学
- Year and Date
  2014-09-12 – 2014-09-14
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 筋萎縮性側索硬化症の新規原因遺伝子ERBB4 (ALS19)の同定
- Author(s)
  高橋祐二、福田陽子、豊田敦、日笠幸一郎、吉村淳、Kari Kurppa、森豊浩代子、Veronique V. Belzil、石浦浩之、三井純、JaCALS、祖父江元、西澤正豊、野元正弘、Klaus Elenius、Guy A. Rouleau、藤山秋佐夫、森下真一、後藤順、辻省次
- Organizer
  第55回日本神経学会学術大会
- Place of Presentation
  福岡国際会議場
- Year and Date
  2014-05-21 – 2014-05-24
- Data Source
  KAKENHI-PLANNED-22129003
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210. 二階堂雅人

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
211. 工藤洋

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
212. 安井康夫

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
213. 岡田洋平

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
214. 伊藤卓治

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
215. 米田穣

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
216. 中山昌喜

# of Collaborated Projects: 0 results

# of Collaborated Products: 6 results
217. 内村有邦

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
218. 中山治之

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
219. 山下雄史

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
220. 藤泰子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
221. 上村匡

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
222. 碓井理夫

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
223. 坂本竜哉

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
224. 坂本浩隆

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
225. 岸川孝弘

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
226. 矢部修平

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
227. 高田龍平

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
228. 豊田優

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
229. 市田公美

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
230. 西田宏記

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
231. 水谷紗弥佳

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
232. 山本俊至

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
233. 塩見美喜子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
234. 有村慎一

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
235. 山平寿智

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
236. 石川麻乃

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
237. 藤本真悟

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
238. 本多真

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
239. 嶋田美穂

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
240. 濱田毅

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
241. 黒岩恵

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
242. 藤田侑里香

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
243. 早津雅仁

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
244. 多胡香奈子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
245. 秋山博子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
246. 矢野健太郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
247. 津川裕司

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
248. 石濱伸明

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
249. 菅裕

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
250. 宮村新一

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
251. 安田仁奈

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
252. スティアマルガデフィン

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
253. 野崎久義

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
254. 山口晴代

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
255. 佐々木猛智

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
256. 小野竜一

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
257. 渡邉正勝

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
258. 水島秀成

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
259. 神田輝

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
260. 小野寺康之

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
261. 辻村太郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
262. 三浦郁夫

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
263. 板東哲哉

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
264. 小山喬

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
265. 小祝敬一郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

TOYODA Atsushi 豊田 敦

豊田 敦 トヨダ アツシ

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TOYODA Atsushi 豊田敦

豊田敦トヨダアツシ