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IWASAKI Wataru  岩崎 渉

ORCIDConnect your ORCID iD *help
Researcher Number 50545019
Affiliation (based on the past Project Information) *help 2021 – 2024: 東京大学, 大学院新領域創成科学研究科, 教授
2015 – 2021: 東京大学, 大学院理学系研究科(理学部), 准教授
2018: 東京大学, 大学院理学系研究科, 准教授
2014 – 2016: 東京大学, 理学(系)研究科(研究院), 准教授
2014 – 2015: 東京大学, 大学院理学系研究科, 准教授 … More
2014: 東京大学, 理学系研究科, 准教授
2011 – 2013: 東京大学, 大気海洋研究所, 講師
2009 – 2010: The University of Tokyo, 大学院新領域創成科学研究科, 助教 Less
Review Section/Research Field
Principal Investigator
Biological Sciences / Transformative Research Areas, Section (III) / Basic Section 45020:Evolutionary biology-related / Genome biology / System genome science / System genome science / ゲノム情報科学
Except Principal Investigator
Medium-sized Section 63:Environmental analyses and evaluation and related fields / Biodiversity/Systematics / Medium-sized Section 64:Environmental conservation measure and related fields … More / Medium-sized Section 23:Architecture, building engineering, and related fields / Complex systems / Basic Section 45030:Biodiversity and systematics-related / Aquatic bioproduction science / Evolutionary biology / Environmental dynamic analysis / Nanobioscience / Biological Sciences Less
Keywords
Principal Investigator
バイオインフォマティクス / ゲノム進化 / ゲノム / テキストマイニング / データ可視化 / 進化 / オーミクス / データ解釈 / データベース / ネットワーク … More / evolution / genome / エキソーム / セントロイド / 巡回セールスマン問題 / ネットワーク生物学 / 進化・系統 / 文献情報処理 / グラフクラスタリング / 可視化 / NaviCluster / 系統樹 / 車輪樹法 … More
Except Principal Investigator
メタゲノム / 微生物生態 / ゲノム / 微生物 / エピゲノム / メタゲノム解析 / バイオインフォマティクス / 系統地理 / ロドプシン / 海洋微生物 / 海洋細菌 / 共生 / 進化 / リシーケンシング / 次世代DNAシーケンサー / 種判別 / 系統地理解析 / 分類 / 集団遺伝 / 隠ぺい系統 / 気候変動 / サンゴ / 集団遺伝解析 / 種分化 / 造礁サンゴ / 都市空間解析 / マイクロバイオーム解析 / 土地利用 / マイクロバイオーム / 都市 / 光受容体 / スーパーコンピュータ / 空間的オミックス解析 / RNA解析 / ゲノム・メタゲノム / 次世代シーケンサー / シングルセル解析 / オミックス解析 / ゲノムアノテーション / ゲノム多型 / ゲノムアッセンブル / スーパーコンピューター / 1細胞解析 / RNA-Seq / 新規ゲノム配列決定 / 微生物相互作用 / 微生物形態 / 窒素循環 / 微生物生態学 / ポストコッホ生態 / ネットワーク / ネットワーク解析 / 機能インフォマティクス / データベース / ポストコッホ生態系 / 微生物ダークマター / 表現型 / Mito-nuclear discordance / de novo genome assembly / シロウオ / アゴハゼ / mito-nuclear discordance / 集団ゲノミクス / 核ゲノム / 交雑帯 / 東シナ海 / 日本海 / ミトコンドリアゲノム / 全ゲノム / 雑種種分化 / ゲノム不和合 / 交雑 / 二次的接触帯 / カロテノイド / 光従属栄養 / 光エネルギー / 環境微生物 / 微生物間共生 / メタノール資化細菌 / 海底堆積物 / メタン酸化細菌 / メチロトロフ / メタノトロフ / メタン / 植物 / 遺伝子 / 窒素固定 / 根粒 / 収斂 / 適応的分子進化 / ectopic gene conversion / 収斂進化 / 根粒共生 / 遺伝子機能の起源 / 協力 / 協力の進化 / 遺伝子水平伝播 / 共生窒素固定 / 根粒形成 / Azorhizobium / 系統解析 / 分子進化 / 遺伝子水平移行 / 根粒形成遺伝子 / 根粒菌 / Trichosporon / One fungus one name / サビキン亜門 / ハラタケ亜門 / Trichosporonales / 酵母分類学 / ゲノム分類 / Trichosporon属 / Trichosporonales目 / ハイブリッドゲノム / 系統樹 / 酵母分類 / メルボルン規約 / One Fungus One Name / 有機物 / 細菌群集 / 微生物ゲノム / 海洋炭素循環 / 珪藻類 / 細菌 / 微生物群集 / ウィルス / 中・深層 / 沈降フラックス / 炭素循環 / 凝集体 / 海洋 / ナノオプティクス / バイオセンシング / 生体生命情報学 / ナノデバイス / ナノ流体工学 / ナノ光学 / 1分子計測 / プラズモン / 蛍光計測 / DNA / ナノポアセンシング / 次世代シークエンサ / ミトゲノム全長配列 / 解析パイプライン / 大量データ / 進化的起源 / 中・深層性魚類 / ミトゲノム / 深海 / 起源 / 集団構造 / 系統 / メタバーコーディング / 次世代シーケンサ / 次世代DNAシーケンサ / インフォームドコンセント / GWAS / 個人ゲノム / de novo配列決定 / ChIP-seq / RNA-seq / パスウエイデータベース / 文献クラスタリング / 知識発見 / QTL解析 / 自然言語処理 / テキストからの情報抽出 / パスウェイデータベース / 機能解析 / オントロジー Less
  • Research Projects

    (25 results)
  • Research Products

    (305 results)
  • Co-Researchers

    (155 People)
  •  プロテイン・ビッグバンの情報科学Principal Investigator

    • Principal Investigator
      岩崎 渉
    • Project Period (FY)
      2024 – 2026
    • Research Category
      Grant-in-Aid for Transformative Research Areas (B)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      The University of Tokyo
  •  Exploration of microbiological perspective on urban engineering

    • Principal Investigator
      小野 悠
    • Project Period (FY)
      2023 – 2025
    • Research Category
      Grant-in-Aid for Challenging Research (Exploratory)
    • Review Section
      Medium-sized Section 23:Architecture, building engineering, and related fields
    • Research Institution
      Toyohashi University of Technology
  •  Invisible diversity of reef-building corals: visualization, estimation of causes and prediction of the future

    • Principal Investigator
      安田 仁奈
    • Project Period (FY)
      2023 – 2025
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 64:Environmental conservation measure and related fields
    • Research Institution
      The University of Tokyo
  •  Platform for Advanced Genome Science

    • Principal Investigator
      黒川 顕
    • Project Period (FY)
      2022 – 2027
    • Research Category
      Grant-in-Aid for Transformative Research Areas (platforms for Advanced Technologies and Research Resources)
    • Research Institution
      National Institute of Genetics
  •  海洋微生物光受容の全貌解明:大規模メタゲノムで描き出す海と光のSeascape

    • Principal Investigator
      吉澤 晋
    • Project Period (FY)
      2022 – 2026
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 63:Environmental analyses and evaluation and related fields
    • Research Institution
      The University of Tokyo
  •  異質倍数体ゲノム三次元構造のバイオインフォマティクスPrincipal Investigator

    • Principal Investigator
      岩崎 渉
    • Project Period (FY)
      2019 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Post-Koch Ecosystem revealed by Functional informatics

    • Principal Investigator
      Matsui Motomu
    • Project Period (FY)
      2019 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Complex systems
    • Research Institution
      The University of Tokyo
  •  同質・異質倍数体生物の環境適応機構のゲノム基盤Principal Investigator

    • Principal Investigator
      岩崎 渉
    • Project Period (FY)
      2019 – 2020
    • Research Category
      Grant-in-Aid for JSPS Fellows
    • Review Section
      Basic Section 45020:Evolutionary biology-related
    • Research Institution
      The University of Tokyo
  •  A new light-energy flow model linking the Earth's ecosystem and the sun

    • Principal Investigator
      Yoshizawa Susumu
    • Project Period (FY)
      2018 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 63:Environmental analyses and evaluation and related fields
    • Research Institution
      The University of Tokyo
  •  Genome evolution in novel hybrid populations

    • Principal Investigator
      Hirase Shotaro
    • Project Period (FY)
      2018 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 45030:Biodiversity and systematics-related
    • Research Institution
      The University of Tokyo
  •  Study of the origin and evolutionary principle of the symbiotic nitrogen fixation system by comprehensive genomic comparative analysis

    • Principal Investigator
      Aoki Seishiro
    • Project Period (FY)
      2017 – 2022
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Evolutionary biology
    • Research Institution
      The University of Tokyo
  •  異質倍数体ゲノム安定化のバイオインフォマティクスPrincipal Investigator

    • Principal Investigator
      岩崎 渉
    • Project Period (FY)
      2017 – 2018
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Comprehensive analysis of genome duplication on genome evolutionPrincipal Investigator

    • Principal Investigator
      Iwasaki Wataru
    • Project Period (FY)
      2016 – 2019
    • Research Category
      Grant-in-Aid for Young Scientists (A)
    • Research Field
      System genome science
    • Research Institution
      The University of Tokyo
  •  Platform for Advanced Genome Science

    • Principal Investigator
      KOHARA Yuji
    • Project Period (FY)
      2016 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources
    • Research Institution
      National Institute of Genetics
  •  Evaluation of novel mechanisms involved in the regulation of large scale organic carbon vertical transport processes in the ocean

    • Principal Investigator
      Nagata Toshi
    • Project Period (FY)
      2015 – 2017
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Research Field
      Environmental dynamic analysis
    • Research Institution
      The University of Tokyo
  •  A data-driven approach for analysis of evolutionary origin and diversification of meso- and bathypelagic fishes

    • Principal Investigator
      Miya Masaki
    • Project Period (FY)
      2014 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Biodiversity/Systematics
    • Research Institution
      Natural History Museum and Institute, Chiba
  •  Optical detection of single DNA molecules using a silicon nanopore for readout of sequence information

    • Principal Investigator
      Saiki Toshiharu
    • Project Period (FY)
      2014 – 2015
    • Research Category
      Grant-in-Aid for Challenging Exploratory Research
    • Research Field
      Nanobioscience
    • Research Institution
      Keio University
  •  One Fungus One Name (1F=1N) on yeasts

    • Principal Investigator
      Takashima Masako
    • Project Period (FY)
      2014 – 2016
    • Research Category
      Grant-in-Aid for Challenging Exploratory Research
    • Research Field
      Biodiversity/Systematics
    • Research Institution
      Institute of Physical and Chemical Research
  •  近縁種で独立に生じた全ゲノム重複が解明する全ゲノム重複のメカニズムとインパクトPrincipal Investigator

    • Principal Investigator
      岩崎 渉
    • Project Period (FY)
      2014 – 2016
    • Research Category
      Grant-in-Aid for JSPS Fellows
    • Research Field
      Genome biology
    • Research Institution
      The University of Tokyo
  •  Studies on syntrophic relationship among marine methane oxidizing microorganisms

    • Principal Investigator
      Takeuchi Mio
    • Project Period (FY)
      2013 – 2017
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Aquatic bioproduction science
    • Research Institution
      National Institute of Advanced Industrial Science and Technology
  •  疾患原因となる希少変異を絞り込み疾患機序を推測するための情報技術開発Principal Investigator

    • Principal Investigator
      岩崎 渉
    • Project Period (FY)
      2011 – 2012
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo
  •  Alleviating bottlenecks in interpretation of omics datasetsPrincipal Investigator

    • Principal Investigator
      IWASAKI Wataru
    • Project Period (FY)
      2011 – 2014
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      System genome science
    • Research Institution
      The University of Tokyo
  •  Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia

    • Principal Investigator
      KOHARA Yuji
    • Project Period (FY)
      2010 – 2015
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Research Institution
      National Institute of Genetics
  •  Bioinformatics for Evolutionary Analysis of Complex and Abundant Biological DataPrincipal Investigator

    • Principal Investigator
      IWASAKI Wataru
    • Project Period (FY)
      2009 – 2010
    • Research Category
      Grant-in-Aid for Research Activity Start-up
    • Research Field
      ゲノム情報科学
    • Research Institution
      The University of Tokyo
  •  Reconstruction and Analysis of Life Systems Using Knowledge-Processing Technology

    • Principal Investigator
      TAKAGI Toshihisa
    • Project Period (FY)
      2005 – 2009
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo

All 2024 2023 2022 2021 2020 2019 2018 2017 2016 2015 2014 2013 2012 2011 2010 2009 2007 Other

All Journal Article Presentation

  • [Journal Article] Impact of <scp>ACSL4</scp> on the prognosis of hepatocellular carcinoma: Association with cancer‐associated fibroblasts and the tumour immune microenvironment2024

    • Author(s)
      Toshida Katsuya、Itoh Shinji、Iseda Norifumi、Tomiyama Takahiro、Yoshiya Shohei、Toshima Takeo、Liu Yu‐Chen、Iwasaki Takeshi、Okuzaki Daisuke、Taniguchi Koji、Oda Yoshinao、Mori Masaki、Yoshizumi Tomoharu
    • Journal Title

      Liver International

      Volume: 44 Issue: 4 Pages: 1011-1023

    • DOI

      10.1111/liv.15839

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23K08133, KAKENHI-PROJECT-22H04925
  • [Journal Article] dwctaxon, an R package for editing and validatingtaxonomic data in Darwin Core format2024

    • Author(s)
      Joel H. Nitta、Wataru Iwasaki
    • Journal Title

      Journal of Open Source Software

      Volume: 9 Issue: 93 Pages: 6215-6215

    • DOI

      10.21105/joss.06215

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Journal Article] PIGB maintains nuclear lamina organization in skeletal muscle of Drosophila2024

    • Author(s)
      Yamamoto-Hino Miki、Ariura Masaru、Tanaka Masahito、Iwasaki Yuka W.、Kawaguchi Kohei、Shimamoto Yuta、Goto Satoshi
    • Journal Title

      Journal of Cell Biology

      Volume: 223 Issue: 2 Pages: 1-30

    • DOI

      10.1083/jcb.202301062

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22K15109, KAKENHI-PROJECT-23KJ1900, KAKENHI-PROJECT-23KJ2155, KAKENHI-PROJECT-23K05772, KAKENHI-PROJECT-22K15099, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-22H00431, KAKENHI-PROJECT-23K23811
  • [Journal Article] MitoFish, MitoAnnotator, and MiFish Pipeline: Updates in 10 Years2023

    • Author(s)
      Tao Zhu、Yukuto Sato、Tetsuya Sado、Masaki Miya、Wataru Iwasaki
    • Journal Title

      Molecular Biology and Evolution

      Volume: 40 Issue: 3 Pages: 1-5

    • DOI

      10.1093/molbev/msad035

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20K12258, KAKENHI-PROJECT-23K23965, KAKENHI-PROJECT-23K28279
  • [Journal Article] Seq2Phase: language model-based accurate prediction of client proteins in liquid-liquid phase separation2023

    • Author(s)
      Miyata Kazuki、Iwasaki Wataru
    • Journal Title

      Bioinformatics Advances

      Volume: 4 Issue: 1

    • DOI

      10.1093/bioadv/vbad189

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-19H05688, KAKENHI-PROJECT-22H04925
  • [Journal Article] canaper: Categorical analysis of neo- and paleo-endemism in R2023

    • Author(s)
      Joel H. Nitta、Shawn W. Laffan、Brent D. Mishler、Wataru Iwasaki
    • Journal Title

      Ecography

      Volume: 2023(9) Issue: 9

    • DOI

      10.1111/ecog.06638

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Journal Article] Machine learning enables prediction of metabolic system evolution in bacteria2023

    • Author(s)
      Konno Naoki、Iwasaki Wataru
    • Journal Title

      Science Advances

      Volume: 9 Issue: 2

    • DOI

      10.1126/sciadv.adc9130

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22KJ1008, KAKENHI-PLANNED-19H05688, KAKENHI-PROJECT-22H04925
  • [Journal Article] AlphaCutter: Efficient removal of non‐globular regions from predicted protein structures2023

    • Author(s)
      Tam Chunlai、Iwasaki Wataru
    • Journal Title

      PROTEOMICS

      Volume: 23 Issue: 16 Pages: 2300176-2300176

    • DOI

      10.1002/pmic.202300176

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-19H05688, KAKENHI-PROJECT-22H04925
  • [Journal Article] A fungal sesquiterpene biosynthesis gene cluster critical for mutualist-pathogen transition in Colletotrichum tofieldiae2023

    • Author(s)
      Hiruma Kei、Aoki Seishiro、Takino Junya、Higa Takeshi、Utami Yuniar Devi、Shiina Akito、Okamoto Masanori、Nakamura Masami、Kawamura Nanami、Ohmori Yoshihiro、Sugita Ryohei、Tanoi Keitaro、Sato Toyozo、Oikawa Hideaki、Minami Atsushi、Iwasaki Wataru、Saijo Yusuke
    • Journal Title

      Nature Communications

      Volume: 14 Issue: 1 Pages: 5288-5288

    • DOI

      10.1038/s41467-023-40867-w

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K06317, KAKENHI-PLANNED-21H05150, KAKENHI-PLANNED-21H05152, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23K26903
  • [Journal Article] Bacteria can maintain rRNA operons solely on plasmids for hundreds of millions of years2023

    • Author(s)
      Anda Mizue、Yamanouchi Shun、Cosentino Salvatore、Sakamoto Mitsuo、Ohkuma Moriya、Takashima Masako、Toyoda Atsushi、Iwasaki Wataru
    • Journal Title

      Nature Communications

      Volume: 14 Issue: 1 Pages: 7232-7232

    • DOI

      10.1038/s41467-023-42681-w

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-19H05689, KAKENHI-PROJECT-22H04925
  • [Journal Article] MultiBarcodeTools: Easy selection of optimal primers for eDNA multi-metabarcoding2023

    • Author(s)
      Tao Zhu、Wataru Iwasaki
    • Journal Title

      Environmental DNA

      Volume: 5 Issue: 6 Pages: 1793-1808

    • DOI

      10.1002/edn3.499

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Journal Article] Mirage 2.0: fast and memory-efficient reconstruction of gene-content evolution considering heterogeneous evolutionary patterns among gene families2022

    • Author(s)
      Tsukasa Fukunaga、Wataru Iwasaki
    • Journal Title

      Bioinformatics

      Volume: 38 Issue: 16 Pages: 4039-4041

    • DOI

      10.1093/bioinformatics/btac433

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-19K20395, KAKENHI-PLANNED-19H05688, KAKENHI-PUBLICLY-20H05582
  • [Journal Article] Unexpected absence of ribosomal protein genes from metagenome-assembled genomes2022

    • Author(s)
      Mise Kazumori、Iwasaki Wataru
    • Journal Title

      ISME Communications

      Volume: 2 Issue: 1 Pages: 118-118

    • DOI

      10.1038/s43705-022-00204-6

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22K18029, KAKENHI-PROJECT-22H04925, KAKENHI-PLANNED-19H05688, KAKENHI-PUBLICLY-22H04894
  • [Journal Article] Lifestyle Evolution Analysis by Binary-State Speciation and Extinction (BiSSE) Model2022

    • Author(s)
      Suzuki Takao K.、Matsui Motomu、Sriswasdi Sira、Iwasaki Wataru
    • Journal Title

      Methods in Molecular Biology

      Volume: 2569 Pages: 327-342

    • DOI

      10.1007/978-1-0716-2691-7_16

    • ISBN
      9781071626900, 9781071626917
    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Journal Article] Selective translation of epigenetic modifiers affects the temporal pattern and differentiation of neural stem cells2022

    • Author(s)
      Wu Quan、Shichino Yuichi、Abe Takaya、Suetsugu Taeko、Omori Ayaka、Kiyonari Hiroshi、Iwasaki Shintaro、Matsuzaki Fumio
    • Journal Title

      Nature Communications

      Volume: 13 Issue: 1 Pages: 470-470

    • DOI

      10.1038/s41467-022-28097-y

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21K15023, KAKENHI-PROJECT-16H06276, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-22H04922, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-18H04003, KAKENHI-PROJECT-19K22406
  • [Journal Article] Deep distributed computing to reconstruct extremely large lineage trees2022

    • Author(s)
      Konno Naoki、Kijima Yusuke、Watano Keito、Ishiguro Soh、Ono Keiichiro、Tanaka Mamoru、Mori Hideto、Masuyama Nanami、Pratt Dexter、Ideker Trey、Iwasaki Wataru、Yachie Nozomu
    • Journal Title

      Nature Biotechnology

      Volume: 40 Issue: 4 Pages: 566-575

    • DOI

      10.1038/s41587-021-01111-2

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Journal Article] An open and continuously updated fern tree of life2022

    • Author(s)
      Joel H. Nitta、Eric Schuettpelz、Santiago Ramirez-Barahona、Wataru Iwasaki
    • Journal Title

      Frontiers in Plant Science

      Volume: 13 Pages: 909768-909768

    • DOI

      10.3389/fpls.2022.909768

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Journal Article] Nondestructive microbial discrimination using single-cell Raman spectra and random forest machine learning algorithm2022

    • Author(s)
      Kanno Nanako、Kato Shingo、Ohkuma Moriya、Matsui Motomu、Iwasaki Wataru、Shigeto Shinsuke
    • Journal Title

      STAR Protocols

      Volume: 3 Issue: 4 Pages: 101812-101812

    • DOI

      10.1016/j.xpro.2022.101812

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-19H05681, KAKENHI-PLANNED-19H05688, KAKENHI-PLANNED-19H05689
  • [Journal Article] Inverse Potts model improves accuracy of phylogenetic profiling2022

    • Author(s)
      Fukunaga Tsukasa、Iwasaki Wataru
    • Journal Title

      Bioinformatics

      Volume: 38 Issue: 7 Pages: 1794-1800

    • DOI

      10.1093/bioinformatics/btac034

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K20395, KAKENHI-PLANNED-19H05688, KAKENHI-PUBLICLY-20H05582
  • [Journal Article] UTX deficiency in neural stem/progenitor cells results in impaired neural development, fetal ventriculomegaly, and postnatal death2022

    • Author(s)
      Koizumi M, Eto H, Saeki M, Seki M, Fukushima T, Mukai S, Ide H, Sera Y, Iwasaki M, Suzuki Y, Tohei A, Kishi Y, Honda H.
    • Journal Title

      FASEB journal

      Volume: 36(12) Issue: 12 Pages: 22662-22662

    • DOI

      10.1096/fj.202201002rr

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21K08378, KAKENHI-PROJECT-22K19823, KAKENHI-PROJECT-22K16333, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-20H03179, KAKENHI-PROJECT-19K17918, KAKENHI-PUBLICLY-21H00242, KAKENHI-PUBLICLY-22H04687
  • [Journal Article] Selectivity of mRNA degradation by autophagy in yeast2021

    • Author(s)
      Shiho Makino, Tomoko Kawamata, Shintaro Iwasaki, Yoshinori Ohsumi
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 2316-2316

    • DOI

      10.1038/s41467-021-22574-6

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H06279, KAKENHI-PLANNED-19H05708, KAKENHI-PROJECT-16H06276, KAKENHI-PROJECT-19K22406
  • [Journal Article] Ten years of collaborative progress in the Quest for Orthologs2021

    • Author(s)
      Linard Benjamin、Ebersberger Ingo、McGlynn Shawn E、Glover Natasha、Mochizuki Tomohiro、Patricio Mateus、Lecompte Odile、Nevers Yannis、Thomas Paul D、Gabaldon Toni、Sonnhammer Erik、Dessimoz Christophe、Uchiyama Ikuo、QFO Consortium
    • Journal Title

      Molecular Biology and Evolution

      Volume: - Issue: 8 Pages: 3033-3045

    • DOI

      10.1093/molbev/msab098

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H01325, KAKENHI-PROJECT-21K06132, KAKENHI-PROJECT-16H06279
  • [Journal Article] Piwi-piRNA complexes induce stepwise changes in nuclear architecture at target loci2021

    • Author(s)
      Iwasaki Yuka W、Sriswasdi Sira、Kinugasa Yasuha、Adachi Jun、Horikoshi Yasunori、Shibuya Aoi、Iwasaki Wataru、Tashiro Satoshi、Tomonaga Takeshi、Siomi Haruhiko
    • Journal Title

      The EMBO Journal

      Volume: 40 Issue: 18

    • DOI

      10.15252/embj.2021108345

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-ORGANIZER-19H05749, KAKENHI-PLANNED-19H05753, KAKENHI-PUBLICLY-21H00259, KAKENHI-PROJECT-21H04927, KAKENHI-PROJECT-21K15017, KAKENHI-PROJECT-16H06279
  • [Journal Article] Production of functional oocytes requires maternally expressed PIWI genes and piRNAs in golden hamsters2021

    • Author(s)
      Hasuwa Hidetoshi、Iwasaki Yuka W.、Au Yeung Wan Kin、Ishino Kyoko、Masuda Harumi、Sasaki Hiroyuki、Siomi Haruhiko
    • Journal Title

      Nature Cell Biology

      Volume: 23 Issue: 9 Pages: 1002-1012

    • DOI

      10.1038/s41556-021-00745-3

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-ORGANIZER-19H05749, KAKENHI-PLANNED-19H05753, KAKENHI-PUBLICLY-21H00259, KAKENHI-PROJECT-20H03175, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18H05214
  • [Journal Article] Hamster PIWI proteins bind to piRNAs with stage-specific size variations during oocyte maturation2021

    • Author(s)
      Ishino Kyoko、Hasuwa Hidetoshi、Yoshimura Jun、Iwasaki Yuka W、Nishihara Hidenori、Seki Naomi M、Hirano Takamasa、Tsuchiya Marie、Ishizaki Hinako、Masuda Harumi、Kuramoto Tae、Saito Kuniaki、Sakakibara Yasubumi、Toyoda Atsushi、Itoh Takehiko、Siomi Mikiko C、Morishita Shinichi、Siomi Haruhiko
    • Journal Title

      Nucleic Acids Research

      Volume: 49 Issue: 5 Pages: 2700-2720

    • DOI

      10.1093/nar/gkab059

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19H05466, KAKENHI-PUBLICLY-19H05268, KAKENHI-PLANNED-19H05753, KAKENHI-PROJECT-18H02421, KAKENHI-PROJECT-18J22025, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17K19424, KAKENHI-PROJECT-20H03175, KAKENHI-PROJECT-16H06276
  • [Journal Article] Machine learning-assisted single-cell Raman fingerprinting for in situ and nondestructive classification of prokaryotes2021

    • Author(s)
      Nanako Kanno、Shingo Kato、Moriya Ohkuma、Motomu Matsui、Wataru Iwasaki、Shinsuke Shigeto
    • Journal Title

      iScience

      Volume: 24 Issue: 9 Pages: 102975-102975

    • DOI

      10.1016/j.isci.2021.102975

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-19H05681, KAKENHI-PLANNED-19H05688, KAKENHI-PLANNED-19H05689
  • [Journal Article] Mirage: estimation of ancestral gene-copy numbers by considering different evolutionary patterns among gene families2021

    • Author(s)
      Fukunaga Tsukasa、Iwasaki Wataru
    • Journal Title

      Bioinformatics Advances

      Volume: 1 Issue: 1

    • DOI

      10.1093/bioadv/vbab014

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-19H05688, KAKENHI-PROJECT-19K20395, KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-20H05582
  • [Journal Article] Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system2021

    • Author(s)
      Miyuki Iwasaki Katsuyuki T. Yamato John L. Bowman Takayuki Kohchi et al
    • Journal Title

      Current Biology

      Volume: 31 Issue: 24 Pages: 5522-5532.e7

    • DOI

      10.1016/j.cub.2021.10.023

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K16166, KAKENHI-PUBLICLY-20H04884, KAKENHI-ORGANIZER-20H05778, KAKENHI-PLANNED-20H05780, KAKENHI-PROJECT-21J15550, KAKENHI-PROJECT-21K06228, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17H07424, KAKENHI-PROJECT-22KJ1701, KAKENHI-ORGANIZER-19H05670, KAKENHI-PLANNED-19H05675
  • [Journal Article] Environmental Atlas of Prokaryotes Enables Powerful and Intuitive Habitat-Based Analysis of Community Structures2020

    • Author(s)
      Mise Kazumori、Iwasaki Wataru
    • Journal Title

      iScience

      Volume: 23 Issue: 10 Pages: 101624-101624

    • DOI

      10.1016/j.isci.2020.101624

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19J14142, KAKENHI-PROJECT-16H06279
  • [Journal Article] Genetic isolation by distance in the yellowfin goby populations revealed by RAD sequencing2020

    • Author(s)
      Hirase S, Tezuka A, Nagano JA, Kikuchi K, Iwasaki W
    • Journal Title

      Ichthyological Research

      Volume: 67 Issue: 1 Pages: 98-104

    • DOI

      10.1007/s10228-019-00709-6

    • NAID

      40022132569

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18H02493, KAKENHI-PROJECT-16H06279
  • [Journal Article] The Genetic Basis of Morphological Diversity in Domesticated Goldfish2020

    • Author(s)
      Kon Tetsuo、Omori Yoshihiro、Fukuta Kentaro、Wada Hironori、Watanabe Masakatsu、Chen Zelin、Iwasaki Miki、Mishina Tappei、Matsuzaki Shin-ichiro S.、Yoshihara Daiki、Arakawa Jumpei、Kawakami Koichi、Toyoda Atsushi、Burgess Shawn M.、Noguchi Hideki、Furukawa Takahisa
    • Journal Title

      Current Biology

      Volume: 30 Issue: 12 Pages: 2260-2274.e6

    • DOI

      10.1016/j.cub.2020.04.034

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K22426, KAKENHI-PROJECT-19K16146, KAKENHI-PROJECT-18H02593, KAKENHI-PROJECT-19H03420, KAKENHI-PROJECT-18J00928, KAKENHI-PROJECT-17H03683, KAKENHI-PROJECT-16H06279
  • [Journal Article] Integrative genomic phylogeography reveals signs of mitonuclear incompatibility in a natural hybrid goby population2020

    • Author(s)
      Shotaro Hirase, Ayumi Tezuka, Atsushi J. Nagano, Mana Sato, Sho Hosoya, Kiyoshi Kikuchi, Wataru Iwasaki
    • Journal Title

      Evolution

      Volume: 75 Issue: 1 Pages: 176-194

    • DOI

      10.1111/evo.14120

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18H02493, KAKENHI-PROJECT-16H06279
  • [Journal Article] Assessment of Polygala paniculata (Polygalaceae) characteristics for evolutionary studies of legume-rhizobia symbiosis2020

    • Author(s)
      Tokumoto Y, Hashimoto K, Soyano T, Aoki S, Iwasaki W, Fukuhara M, Nakagawa T, Saeki K, Yokoyama J, Fujita H, Kawaguchi M
    • Journal Title

      J Plant Res.

      Volume: 133 Issue: 1 Pages: 109-122

    • DOI

      10.1007/s10265-019-01159-x

    • NAID

      40022129850

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-18K06282, KAKENHI-PROJECT-19K06733, KAKENHI-PROJECT-16H06279
  • [Journal Article] A Fast Likelihood Method to Reconstruct and Visualize Ancestral Scenarios2019

    • Author(s)
      Ishikawa Sohta A、Zhukova Anna、Iwasaki Wataru、Gascuel Olivier
    • Journal Title

      Molecular Biology and Evolution

      Volume: 36 Issue: 9 Pages: 2069-2085

    • DOI

      10.1093/molbev/msz131

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279
  • [Journal Article] Genome and transcriptome evolve separately in recently hybridized Trichosporon fungi2019

    • Author(s)
      Sriswasdi Sira、Takashima Masako、Manabe Ri-ichiroh、Ohkuma Moriya、Iwasaki Wataru
    • Journal Title

      Communications Biology

      Volume: 2 Issue: 1 Pages: 263-263

    • DOI

      10.1038/s42003-019-0515-2

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-19H04853
  • [Journal Article] Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer2019

    • Author(s)
      Yachida Shinichi、Mizutani Sayaka、Shiroma Hirotsugu、Shiba Satoshi、Nakajima Takeshi、Sakamoto Taku、Saito Yutaka、Fukuda Shinji、Shibata Tatsuhiro、Yamada Takuji
    • Journal Title

      Nature Medicine

      Volume: 25 Issue: 6 Pages: 968-976

    • DOI

      10.1038/s41591-019-0458-7

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-19K08416, KAKENHI-PROJECT-18K15800, KAKENHI-PUBLICLY-18H04805, KAKENHI-PROJECT-16H06373, KAKENHI-PROJECT-19J40249, KAKENHI-PROJECT-16H06279
  • [Journal Article] Possible cross-feeding pathway of facultative methylotroph Methyloceanibacter caenitepidi Gela4 on methanotroph Methylocaldum marinum S8.2019

    • Author(s)
      Mio Takeuchi, Haruka Ozaki, Satoshi Hiraoka, Yoichi Kamagata, Susumu Sakata, Hideyoshi Yoshioka, and Wataru Iwasaki.
    • Journal Title

      PLOS ONE

      Volume: 14 Issue: 3 Pages: e0213535-e0213535

    • DOI

      10.1371/journal.pone.0213535

    • NAID

      120007128121

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17H01363
  • [Journal Article] A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators2019

    • Author(s)
      Needham David M.、Yoshizawa Susumu、Hosaka Toshiaki et. al.
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 116 Issue: 41 Pages: 20574-20583

    • DOI

      10.1073/pnas.1907517116

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K07324, KAKENHI-PROJECT-17K08296, KAKENHI-PROJECT-18K19224, KAKENHI-PROJECT-19K16090, KAKENHI-PUBLICLY-19H04727, KAKENHI-PUBLICLY-19H05396, KAKENHI-PROJECT-18H04136, KAKENHI-PROJECT-18H02411, KAKENHI-PROJECT-19J01352, KAKENHI-PROJECT-16H06279
  • [Journal Article] Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community2019

    • Author(s)
      Hiraoka Satoshi、Okazaki Yusuke、Anda Mizue、Toyoda Atsushi、Nakano Shin-ichi、Iwasaki Wataru
    • Journal Title

      Nature Communications

      Volume: 10 Issue: 1 Pages: 159-159

    • DOI

      10.1038/s41467-018-08103-y

    • NAID

      120006879468

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PUBLICLY-17H05834, KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279
  • [Journal Article] Graph Splitting: A Graph-Based Approach for Superfamily-Scale Phylogenetic Tree Reconstruction2019

    • Author(s)
      Matsui Motomu、Iwasaki Wataru
    • Journal Title

      Systematic Biology

      Volume: 69 Pages: 265-279

    • DOI

      10.1093/sysbio/syz049

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279, KAKENHI-PLANNED-19H05688
  • [Journal Article] MitoFish and MiFish pipeline: a mitochondrial genome database of fish with an analysis pipeline for environmental DNA metabarcoding2018

    • Author(s)
      Yukuto Sato, Masaki Miya, Tsukasa Fukunaga, Tetsuya Sado, Wataru Iwasaki
    • Journal Title

      Molecular Biology and Evolution

      Volume: 35 Issue: 6 Pages: 1553-1555

    • DOI

      10.1093/molbev/msy074

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17K19298, KAKENHI-PROJECT-16H06279
  • [Journal Article] Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia2018

    • Author(s)
      Kumagai Yohei、Yoshizawa Susumu、Nakajima Yu、Watanabe Mai、Fukunaga Tsukasa、Ogura Yoshitoshi、Hayashi Tetsuya、Oshima Kenshiro、Hattori Masahira、Ikeuchi Masahiko、Kogure Kazuhiro、DeLong Edward F.、Iwasaki Wataru
    • Journal Title

      The ISME Journal

      Volume: in press Issue: 5 Pages: 1329-1343

    • DOI

      10.1038/s41396-018-0058-4

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05834, KAKENHI-PROJECT-15H02800, KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-15J08516, KAKENHI-PROJECT-16H06279
  • [Journal Article] SonicParanoid: fast, accurate and easy orthology inference2018

    • Author(s)
      Cosentino Salvatore、Iwasaki Wataru
    • Journal Title

      Bioinformatics

      Volume: 35 Issue: 1 Pages: 149-151

    • DOI

      10.1093/bioinformatics/bty631

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PUBLICLY-17H05834, KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279
  • [Journal Article] Identification of a neuronal population in the telencephalon essential for fear conditioning in zebrafish.2018

    • Author(s)
      Lal P, Tanabe H, Suster ML, Ailani D, Kotani Y, Muto A, Itoh M, Iwasaki M, Wada H, Yaksi E, Kawakami K.
    • Journal Title

      BMC Biol.

      Volume: 16 Issue: 1 Pages: 45-45

    • DOI

      10.1186/s12915-018-0502-y

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K07386, KAKENHI-PUBLICLY-16H01651, KAKENHI-PROJECT-15H02370, KAKENHI-PROJECT-17K07494, KAKENHI-PUBLICLY-18H04988, KAKENHI-PROJECT-16H06279, KAKENHI-ORGANIZER-15H05935
  • [Journal Article] Seasonal Analysis of Microbial Communities in Precipitation in the Greater Tokyo Area, Japan2017

    • Author(s)
      Hiraoka Satoshi、Miyahara Masaya、Fujii Kazushi、Machiyama Asako、Iwasaki Wataru
    • Journal Title

      Frontiers in Microbiology

      Volume: 8 Pages: 1506-1506

    • DOI

      10.3389/fmicb.2017.01506

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-15J08604, KAKENHI-PROJECT-16H06279
  • [Journal Article] Function and evolution of a Lotus japonicas AP2/ERF family transcription factor that is required for development of infection threads2017

    • Author(s)
      Yano K, Aoki S, Liu M, Umehara Y, Suganuma N, Iwasaki W, Sato S, Soyano T, Kouchi H, Kawaguchi M
    • Journal Title

      DNA Research

      Volume: 印刷中 Pages: 193-203

    • DOI

      10.1093/dnares/dsw052

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15K07103, KAKENHI-PROJECT-17K07509, KAKENHI-PROJECT-26660057, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17H03702
  • [Journal Article] A sodium binding system alleviates acute salt stress during seawater acclimation in eels2017

    • Author(s)
      Wong Marty Kwok Shing、Tsukada Takehiro、Ogawa Nobuhiro、Pipil Supriya、Ozaki Haruka、Suzuki Yutaka、Iwasaki Wataru、Takei Yoshio
    • Journal Title

      Zoological Letters

      Volume: 3 Issue: 1 Pages: 22-22

    • DOI

      10.1186/s40851-017-0081-8

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16K18575, KAKENHI-PROJECT-16H06279
  • [Journal Article] Generalist species drive microbial dispersion and evolution.2017

    • Author(s)
      Sira Sriswasdi, Ching-chia Yang, and Wataru Iwasaki.
    • Journal Title

      Nature Communications

      Volume: 8 Issue: 1 Pages: 1162-1162

    • DOI

      10.1038/s41467-017-01265-1

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Journal Article] A Trichosporonales genome tree based on 27 haploid and three evolutionarily conserved ‘natural’ hybrid genomes2017

    • Author(s)
      Takashima Masako、Sriswasdi Sira、Manabe Ri-Ichiroh、Ohkuma Moriya、Sugita Takashi、Iwasaki Wataru
    • Journal Title

      Yeast

      Volume: 35 Issue: 1 Pages: 99-111

    • DOI

      10.1002/yea.3284

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05834, KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279
  • [Journal Article] Inactivity periods and postural change speed can explain atypical postural change patterns of Caenorhabditis elegans mutants2017

    • Author(s)
      Tsukasa Fukunaga and Wataru Iwasaki
    • Journal Title

      BMC Bioinformatics

      Volume: 18 Issue: 1 Pages: 46-46

    • DOI

      10.1186/s12859-016-1408-8

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16J00129
  • [Journal Article] Phylogeography of the yellowfin goby Acanthogobius flavimanus in native and non-native distributions.2017

    • Author(s)
      Shotaro Hirase, Sherrie Chambers, Kathryn Hassell, Melissa Carew, Vincent Pettigrove, Kiyoshi Soyano, Masaki Nagae, and Wataru Iwasaki.
    • Journal Title

      Marine Biology

      Volume: 164 Issue: 5 Pages: 106-106

    • DOI

      10.1007/s00227-017-3137-6

    • Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-16H06279
  • [Journal Article] Structural mechanism for light-driven transport by a new type of chloride ion pump, Nonlabens marinus rhodopsin-32016

    • Author(s)
      Toshiaki Hosaka, Susumu Yoshizawa, Yu Nakajima, Noboru Ohsawa, Masakatsu Hato, Edward F. DeLong, Kazuhiro Kogure, Shigeyuki Yokoyama, Tomomi Kimura-Someya, Wataru Iwasaki and Mikako Shirouzu
    • Journal Title

      Journal of Biological Chemistry

      Volume: 291 Issue: 34 Pages: 17488-17495

    • DOI

      10.1074/jbc.m116.728220

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15H02800, KAKENHI-PROJECT-15J07201, KAKENHI-PROJECT-15K18523, KAKENHI-PROJECT-16H06279
  • [Journal Article] Global deceleration of gene evolution following recent genome hybridizations in fungi.2016

    • Author(s)
      Sira Sriswasdi, Masako Takashima, Ri-ichiroh Manabe, Moriya Ohkuma, Takashi Sugita, and Wataru Iwasaki.
    • Journal Title

      Genome Research

      Volume: 26 Issue: 8 Pages: 1081-1090

    • DOI

      10.1101/gr.205948.116

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-16H06154, KAKENHI-PROJECT-14F04382, KAKENHI-PROJECT-16H06279
  • [Journal Article] Metagenomics and bioinformatics in microbial ecology : Current status and beyond.2016

    • Author(s)
      Satoshi Hiraoka, Ching-chia Yang, and Wataru Iwasaki.
    • Journal Title

      Microbes and Environments

      Volume: 31 Pages: 204-212

    • NAID

      130005265061

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Journal Article] Mitogenome Sequencing Alleviates Random Rooting Effect in Phylogeography.2016

    • Author(s)
      Shotaro Hirase, Hirohiko Takeshima, Mutsumi Nishida, Wataru Iwasaki
    • Journal Title

      Genome Biology and Evolution

      Volume: - Issue: 4 Pages: 1267-1278

    • DOI

      10.1093/gbe/evw063

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-15K07538, KAKENHI-PROJECT-15J06937, KAKENHI-PROJECT-25340063, KAKENHI-PROJECT-26850131, KAKENHI-PROJECT-16H06279
  • [Journal Article] SCOP/PHLPP1β mediates circadian regulation of long-term recongnition memory.2016

    • Author(s)
      Kimiko Shimizu, Yodai Kobayashi, Erika Nakatsuji, Shigeki Shimba, Maya Yamazaki, Kenji Sakimura and Yoshitaka Fukada.
    • Journal Title

      Nat. Commun.

      Volume: 7 Issue: 1 Pages: 12926-12926

    • DOI

      10.1038/ng.3731

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-15H01173, KAKENHI-PUBLICLY-16H01380, KAKENHI-PROJECT-24227001, KAKENHI-PROJECT-16H06279, KAKENHI-PUBLICLY-15H01395
  • [Journal Article] MOCCS: clarifying DNA-binding motif ambiguity using ChIP-Seq data2016

    • Author(s)
      Ozaki H, Iwasaki W
    • Journal Title

      Comput. Biol. Chem.

      Volume: in press Pages: 62-72

    • DOI

      10.1016/j.compbiolchem.2016.01.014

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Journal Article] Genomic and metagenomic analysis of microbes in a soil environment affected by the 2011 Great East Japan Earthquake Tsunami2016

    • Author(s)
      Hiraoka S, Machiyama A, Ijichi M, Inoue K, Oshima K, Hattori M, Yoshizawa S, Kogure K, and Iwasaki W
    • Journal Title

      BMC Genomics

      Volume: 17 Issue: 1 Pages: 53-53

    • DOI

      10.1186/s12864-016-2380-4

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-15J08604, KAKENHI-PROJECT-26660152
  • [Journal Article] Flexible selection of diversified Na(+)/K(+)-ATPase α-subunit isoforms for osmoregulation in teleosts.2016

    • Author(s)
      Wong MKS, Pipil S, Ozaki H, Suzuki Y, Iwasaki W, Takei Y.
    • Journal Title

      Zoological Lett

      Volume: 2 Issue: 1 Pages: 15-15

    • DOI

      10.1186/s40851-016-0050-7

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-16K18575, KAKENHI-PROJECT-16H06279
  • [Journal Article] Somatic Primary piRNA Biogenesis Driven by cis-Acting RNA Elements and trans-Acting Yb2015

    • Author(s)
      Ishizu H, Iwasaki YW, Hirakata S, Ozaki H, Iwasaki W, Siomi H, Siomi MC
    • Journal Title

      Cell Reports

      Volume: 12 Issue: 3 Pages: 429-440

    • DOI

      10.1016/j.celrep.2015.06.035

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-15H01473, KAKENHI-PROJECT-221S0002, KAKENHI-PLANNED-26113004, KAKENHI-PROJECT-25221003, KAKENHI-PROJECT-25221101, KAKENHI-PROJECT-15H05583, KAKENHI-PROJECT-15H05585, KAKENHI-ORGANIZER-26113001
  • [Journal Article] GroupTracker: Video Tracking System for Multiple Animals under Severe Occlusion.2015

    • Author(s)
      Tsukasa Fukunaga, Shoko Kubota, Shoji Oda, and Wataru Iwasaki.
    • Journal Title

      Computational Biology and Chemistry

      Volume: in press Pages: 39-45

    • DOI

      10.1016/j.compbiolchem.2015.02.006

    • Peer Reviewed / Acknowledgement Compliant
    • Data Source
      KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-15J07635
  • [Journal Article] Tepidicaulis marinus gen. nov., sp. nov., a novel marine bacterium reducing nitrate to nitrous oxide strictly under microaerobic conditions.2015

    • Author(s)
      Mio Takeuchi, Takao Yamagishi, Yoichi Kamagata, Kenshiro Oshima, Masahira Hattori, Taiki Katayama, Satoshi Hanada, Hideyuki Tamaki, Katsumi Marumo, Hiroto Maeda, Munetomo Nedachi, Wataru Iwasaki, Yuichi Suwa, and Susumu Sakata.
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology, published online (2015)

      Volume: in press Issue: Pt_6 Pages: 1749-1754

    • DOI

      10.1099/ijs.0.000167

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-25450265
  • [Journal Article] Computational ethology: integration of bioinformatics and ethology2015

    • Author(s)
      福永津嵩,岩崎渉.
    • Journal Title

      Leading Author's

      Volume: 4 Pages: e003

    • DOI

      10.7875/leading.author.4.e003

    • Language
      Japanese
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species2015

    • Author(s)
      Masaki Miya et al.
    • Journal Title

      Royal Society open science

      Volume: 2 Issue: 7 Pages: 150088-150088

    • DOI

      10.1098/rsos.150088

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K14610, KAKENHI-PROJECT-26640136, KAKENHI-PROJECT-15K18590, KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-26291083
  • [Journal Article] Selection of orthologous genes for construction of a highly resolved phylogenetic tree and clarification of the phylogeny of Trichosporonales species.2015

    • Author(s)
      Takashima, M., Manabe, R., Iwasaki, W., Ohyama, A., Ohkuma, M., and Sugita, T.
    • Journal Title

      PLOS ONE

      Volume: 10 Issue: 8 Pages: e0131217-e0131217

    • DOI

      10.1371/journal.pone.0131217

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-26650148, KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-25460226
  • [Journal Article] Complete Genome Sequence of Pseudomonas sp. Strain TKP, Isolated from a gamma-Hexachlorocyclohexane-Degrading Mixed Culture2014

    • Author(s)
      Ohtsubo Y, Kishida K, Sato T, Tabata M, Kawasumi T, Ogura Y, Hayashi T, Tsuda M, Nagata Y
    • Journal Title

      Genome announcements

      Volume: 2 Issue: 1

    • DOI

      10.1128/genomea.01241-13

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23651183, KAKENHI-PROJECT-24658068, KAKENHI-PROJECT-25292043, KAKENHI-PROJECT-25292206, KAKENHI-PROJECT-221S0002
  • [Journal Article] MetaMetaDB: A Database and Analytic System for Investigating Microbial Habitability.2014

    • Author(s)
      Ching-chia Yang and Wataru Iwasaki
    • Journal Title

      PLOS ONE

      Volume: 9 Issue: 1 Pages: e87126-e87126

    • DOI

      10.1371/journal.pone.0087126

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] Discovery of osmotic sensitive transcription factors in fish intestine via a transcriptomic approach.2014

    • Author(s)
      Marty Kwok-Shing Wong, Haruka Ozaki, Yutaka Suzuki, Wataru Iwasaki, and Yoshio Takei.
    • Journal Title

      BMC Genomics, 15, 1134. (2014)

      Volume: 15 Issue: 1 Pages: 1134-1134

    • DOI

      10.1186/1471-2164-15-1134

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-221S0002
  • [Journal Article] Complete genome sequence of Winogradskyella sp. strain PG-2, a proteorhodopsin-containing marine flavobacterium.2014

    • Author(s)
      Yohei Kumagai, Susumu Yoshizawa, Kenshiro Oshima, Masahira Hattori, Wataru Iwasaki, and Kazuhiro Kogure.
    • Journal Title

      Genome Announcements, 2, . (2014)

      Volume: 2 Issue: 3

    • DOI

      10.1128/genomea.00490-14

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] Parallel selection on gene copy number variations through evolution of three-spined stickleback genomes.2014

    • Author(s)
      Shotaro Hirase, Haruka Ozaki, and Wataru Iwasaki.
    • Journal Title

      BMC Genomics

      Volume: 15 Issue: 1 Pages: 735-735

    • DOI

      10.1186/1471-2164-15-735

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] NGSデータ解析2014

    • Author(s)
      尾崎遼,岩崎渉.
    • Journal Title

      実験医学

      Volume: 32 Pages: 3197-3202

    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] Direct binding of Ataxin-2 to distinct elements in 3' UTRs promotes mRNA stability and protein expression.2014

    • Author(s)
      Yokoshi, M., Li, Q., Yamamoto, M., Okada, H., Suzuki, Y., and Kawahara, Y.
    • Journal Title

      Molecular cell

      Volume: 55 Issue: 2 Pages: 186-198

    • DOI

      10.1016/j.molcel.2014.05.022

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14J01452, KAKENHI-PUBLICLY-25110719, KAKENHI-PROJECT-25293201, KAKENHI-PROJECT-25670419, KAKENHI-PROJECT-221S0002
  • [Journal Article] CapR : revealing structural specificities of RNA-binding protein target recognition using CLIP-seq data2014

    • Author(s)
      Tsukasa Fukunaga, Haruka Ozaki, Goro Terai, Kiyoshi Asai, Wataru Iwasaki and Hisanori Kiryu
    • Journal Title

      Genome Biology

      Volume: 15 Issue: 1

    • DOI

      10.1186/gb-2014-15-1-r16

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-22240031, KAKENHI-PROJECT-23710231, KAKENHI-PUBLICLY-25134701, KAKENHI-PROJECT-25240044, KAKENHI-PROJECT-25870190
  • [Journal Article] Methylocaldum marinum sp. nov., a novel thermotolerant methane oxidizing bacterium isolated from marine sediments.2014

    • Author(s)
      Mio Takeuchi, Yoichi Kamagata, Kenshiro Oshima, Satoshi Hanada, Hideyuki Tamaki, Katsumi Marumo, Hiroto Maeda, Munetomo Nedachi, Masahira Hattori, Wataru Iwasaki, and Susumu Sakata.
    • Journal Title

      International Journal of Systematic and Evolutionary Microbiology

      Volume: 64 Issue: Pt_9 Pages: 3240-3246

    • DOI

      10.1099/ijs.0.063503-0

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] Methyloceanibacter caenitepidi gen. nov., sp. nov., a novel facultatively methylotrophic bacterium isolated from marine sediments near the hydrothermal vent area2014

    • Author(s)
      Takeuchi, M., Katayama, T., Yamagishi, T., Hanada, S., Tamaki, H., Kamagata, Y., Oshima, K., Hattori, M., Marumo, K., Nedachi, M., Maeda, H., Suwa, Y., and Sakata, S.
    • Journal Title

      Int J Syst Evol Microbiol

      Volume: 64 Issue: Pt_2 Pages: 462-468

    • DOI

      10.1099/ijs.0.053397-0

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-25450265, KAKENHI-PROJECT-221S0002
  • [Journal Article] CLOCK-controlled polyphonic regulations of circadian rhythms through canonical and non-canonical E-boxes.2014

    • Author(s)
      Hikari Yoshitane, Haruka Ozaki, Hideki Terajima, Ngoc-Hien Du, Yutaka Suzuki, Taihei Fujimori, Naoki Kosaka, Shigeki Shimba, Sumio Sugano, Toshihisa Takagi, Wataru Iwasaki, and Yoshitaka Fukada.
    • Journal Title

      Molecular and Cellular Biology

      Volume: 34 Issue: 10 Pages: 1776-1787

    • DOI

      10.1128/mcb.01465-13

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-25440041, KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-24227001
  • [Journal Article] Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria.2014

    • Author(s)
      Susumu Yoshizawa, Yohei Kumagai, Hana Kim, Yoshitoshi Ogura, Tetsuya Hayashi, Wataru Iwasaki, Edward F. DeLong, and Kazuhiro Kogure.
    • Journal Title

      Proc Natl Acad Sci U S A

      Volume: 111 Issue: 18 Pages: 6732-6737

    • DOI

      10.1073/pnas.1403051111

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-24681003, KAKENHI-PROJECT-221S0002
  • [Journal Article] Crossing Borders for Science.2014

    • Author(s)
      Sebastian J. Schultheiss, Joshua SungWoo Yang, Wataru Iwasaki, Shu-Hsi Lin, Angela Jean, and Magali Michaut
    • Journal Title

      PLOS Computational Biology

      Volume: 10 Issue: 3 Pages: e1003519-e1003519

    • DOI

      10.1371/journal.pcbi.1003519

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] ENCODEプロジェクトで明らかになったこと2013

    • Author(s)
      尾崎遼,岩崎渉
    • Journal Title

      細胞工学

      Volume: 32 Pages: 101-106

    • NAID

      40019538138

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] Evolutionary origin of the Scombridae (tunas and mackerels) : members of a Paleogene adaptive radiation with 14 other pelagic fish families2013

    • Author(s)
      Miya, M., Friedman, M., Satoh, T.P., Takeshima, H., Sado, T., Iwasaki, W., Yamanoue, Y., Nakatani, M., Mabuchi, K., Inoue, J.G., Poulsen, J.Y., Fukunaga, T., Sato, Y. and Nishida, M
    • Journal Title

      PLOS ONE

      Volume: 8 Issue: 9 Pages: e73535-e73535

    • DOI

      10.1371/journal.pone.0073535

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23370041, KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-24770082, KAKENHI-PROJECT-25340063
  • [Journal Article] MitoFish and MitoAnnotator : a mitochondrial genome database of fish with an accurate and automatic annotation pipeline2013

    • Author(s)
      Iwasaki, W., Fukunaga T., Isagozawa R., Yamada K., Maeda Y., Satoh T.P., Sado T., Mabuchi K., Takeshima H., Miya, M. and Nishida M
    • Journal Title

      Molecular Biology and Evolution

      Volume: 30 Issue: 11 Pages: 2531-2540

    • DOI

      10.1093/molbev/mst141

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23370041, KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-24770082, KAKENHI-PROJECT-25340063
  • [Journal Article] From β- to α-Proteobacteria: the Origin and Evolution of Rhizobial Nodulation Genes nodIJ.2013

    • Author(s)
      Seishiro Aoki, Motomi Ito, and Wataru Iwasaki.
    • Journal Title

      Molecular Biology and Evolution

      Volume: 30 Issue: 11 Pages: 2494-2508

    • DOI

      10.1093/molbev/mst153

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] 水圏生物学における次世代シーケンサー活用の現状と応用可能性への展望2012

    • Author(s)
      佐藤行人, 八谷剛史, 岩崎渉
    • Journal Title

      水産育種

      Volume: 41 Pages: 17-32

    • NAID

      40019232266

    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Journal Article] Integration of interactive, multi-scale network navigation approach with Cytoscape for functional genomics in the big data era2012

    • Author(s)
      Thanet Praneenararat, Toshihisa Takagi, and Wataru Iwasaki
    • Journal Title

      BMC Genomics

      Volume: 13(Suppl 7) Issue: Suppl 7 Pages: S24-S24

    • DOI

      10.1186/1471-2164-13-s7-s24

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-11J03823, KAKENHI-PROJECT-23710231
  • [Journal Article] 水圏生物学における次世代シーケンサー活用の現状と応用可能性への展望2012

    • Author(s)
      佐藤行人,八谷剛史,岩崎渉
    • Journal Title

      水産育種

      Volume: 41 Pages: 17-32

    • NAID

      40019232266

    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] Generalized Centroid Estimators in Bioinformatics.2011

    • Author(s)
      Michiaki Hamada, Hisanori Kiryu, Wataru Iwasaki, Kiyoshi Asai.
    • Journal Title

      PLoS ONE

      Volume: 6

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event2011

    • Author(s)
      Ono R., et.al.
    • Journal Title

      DNA Research

      Volume: 18(4) Issue: 4 Pages: 211-219

    • DOI

      10.1093/dnares/dsr012

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-22770004, KAKENHI-PUBLICLY-23013010, KAKENHI-PROJECT-23221010, KAKENHI-PROJECT-221S0002
  • [Journal Article] 文献管理・文献推薦2011

    • Author(s)
      岩崎渉,山本泰智,高木利久.
    • Journal Title

      実験医学

      Volume: 29 Pages: 2556-2562

    • Data Source
      KAKENHI-PROJECT-23710231
  • [Journal Article] Generalized centroid estimators in bioinformatics2011

    • Author(s)
      Michiaki Hamada, Hisanori Kiryu, Wataru Iwasaki, Kiyoshi Asai
    • Journal Title

      PLoS One

      Volume: 6

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Journal Article] Interactive, Multi-Scale Navigation of Large and Complicated Biological Networks.2011

    • Author(s)
      Thanet Praneenararat, Toshihisa Takagi, Wataru Iwasaki.
    • Journal Title

      Bioinformatics

      Volume: 27 Pages: 1121-1127

    • NAID

      110007990852

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] Interactive, Multi-Scale Navigation of Large and Complicated Biological Networks.2011

    • Author(s)
      Thanet Praneenararat, Toshihisa Takagi, Wataru Iwasaki
    • Journal Title

      Bioinformatics 27

      Pages: 1121-1127

    • NAID

      110007990852

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] Interactive, multiscale navigation of large and complicated biological networks2011

    • Author(s)
      Thanet Praneenararat, Toshihisa Takagi, Wataru Iwasaki
    • Journal Title

      Bioinformatics

      Volume: 27 Issue: 8 Pages: 1121-1127

    • DOI

      10.1093/bioinformatics/btr083

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-11J03823, KAKENHI-PUBLICLY-23129502, KAKENHI-PROJECT-23710231
  • [Journal Article] Generalized Centroid Estimators in Bioinformatics.2011

    • Author(s)
      Michiaki Hamada, Hisanori Kiryu, Wataru Iwasaki, Kiyoshi Asai.
    • Journal Title

      PLoS ONE 6

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] 文献管理・文献推薦2011

    • Author(s)
      岩崎渉, 山本泰智, 高木利久
    • Journal Title

      実験医学

      Volume: 29 Pages: 2556-2662

    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Journal Article] An Intuitive, Informative, and Most Balanced Representation of Phylogenetic Topologies.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Journal Title

      Systematic Biology 59

      Pages: 584-593

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] TogoDoc Server/Client System : Smart Recommendation and Efficient Management of Life Science Literature.2010

    • Author(s)
      Wataru Iwasaki, Yasunori Yamamoto, Toshihisa Takagi.
    • Journal Title

      PLoS ONE

      Volume: 5

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] An Intuitive, Informative, and Most Balanced Representation of Phylogenetic Topologies.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi.
    • Journal Title

      Systematic Biology

      Volume: 59 Pages: 584-593

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] TogoDoc Server/Client System : Smart Recommendation and Efficient Management of Life Science Literature.2010

    • Author(s)
      Wataru Iwasaki, Yasunori Yamamoto, Toshihisa Takagi
    • Journal Title

      PLoS ONE 5

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] An Intuitive, Informative, and Most Balanced Representation of Phylogenetic Topologies.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Journal Title

      Systematic Biology 1((印刷中)掲載確定)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Journal Article] Rapid Pathway Evolution Facilitated by Horizontal Gene Transfers across Prokaryotic Lineages2009

    • Author(s)
      Iwasaki, W., Takagi, T.
    • Journal Title

      PLoS Genetics. 5(3)

    • Data Source
      KAKENHI-PROJECT-17017002
  • [Journal Article] Rapid pathway evolution facilitated by horizontal gene transfers across prokaryotic lineages2009

    • Author(s)
      Iwasaki, W. (Takagi, T.)
    • Journal Title

      PLoS Genetics 5(3)

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017002
  • [Journal Article] Reconstruction of Highly Heterogeneous Gene-Content Evolution across the Three Domains of Life2007

    • Author(s)
      Iwasaki, W., Takagi, T.
    • Journal Title

      Bioinformatics (ISMB/ECCB2007 proceeding issue) 23

    • Data Source
      KAKENHI-PROJECT-17017002
  • [Journal Article] Reconstruction of highly heterogeneous gene-content evolution across the three domains of life2007

    • Author(s)
      Iwasaki, W. (Takagi, T.)
    • Journal Title

      Bioinformatics 23(13)

      Pages: 230-239

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017002
  • [Presentation] クサトベラの種子散布に関する果実二型が遺伝子流動に与える影響2024

    • Author(s)
      栄村奈緒子、古本良、村中智明、岩崎貴也、永野惇、傳田哲郎、内貴章世、梶田忠、本庄三恵、井鷺裕司、工藤洋
    • Organizer
      第71回日本生態学会大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Presentation] オオミジンコにおける性差を示すアイソフォームの同定2023

    • Author(s)
      加藤泰彦、 新田ジョエル、Christelle Alexa Perez、 Nikko Adhitama、 豊田敦、岩崎渉、渡邉肇
    • Organizer
      日本動物学会第94回山形大会
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Presentation] バクテリアゲノム設計原理のバイオインフォマティクス2023

    • Author(s)
      岩崎渉
    • Organizer
      第96回日本細菌学会総会
    • Invited
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Presentation] 機能未知遺伝子の機能推測から「遺伝子誕生学」へ2022

    • Author(s)
      岩崎渉
    • Organizer
      第22回日本蛋白質科学会年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Presentation] 生命進化可能性のバイオインフォマティクス2022

    • Author(s)
      岩崎渉
    • Organizer
      極限環境生物学会第23回シンポジウム
    • Invited
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Presentation] Bac2Feature:系統情報を利用した微生物の形質推定パイプライン2022

    • Author(s)
      藤吉真生、鈴木誉保、松井求、岩崎渉
    • Organizer
      第24回日本進化学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] 機能インフォマティクスが解き明かすポストコッホ生態系2022

    • Author(s)
      松井求、岩崎渉
    • Organizer
      新学術領域「ポストコッホ生態」第4回領域会議
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] Bac2Feature による微生物群集の表現型解析2022

    • Author(s)
      藤吉真生、鈴木誉保、松井求、岩崎渉
    • Organizer
      第35回日本微生物生態学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] ポストコッホ生態学が解き明かす輪作に呼応した微生物動態2022

    • Author(s)
      松井求、明石基洋、鈴木誉保、藤吉真生、土肥裕希、森ヶ崎進、林久喜、高谷直樹、岩崎渉
    • Organizer
      第35回日本微生物生態学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] 微生物群集は普遍的に極めて安定な形質組成を持つ2022

    • Author(s)
      鈴木誉保、松井求、森ヶ崎進、大津厳生、土肥裕希、林久喜、高谷直樹、岩崎渉
    • Organizer
      第60回日本生物物理学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] Suppression of bacterial root growth inhibition by Colletotrichum tofieldiae in Arabidopsis thaliana2022

    • Author(s)
      Yuniar Devi Utami, Salvatore Cosentino, Anda Mizue, Iwasaki Wataru, Hiruma Kei
    • Organizer
      令和4年度日本植物病理学会大会
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] シン・近隣結合法:PANJEP法が問い直す系統解析の常識2022

    • Author(s)
      松井求、岩崎渉
    • Organizer
      第24回日本進化学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] 放線菌のカルコフォア合成様遺伝子群の発現制御を担うシグマ因子SigCの解析2022

    • Author(s)
      藤本正浩、Salvatore Cosentino、按田瑞恵、佐藤光彦、中村佳司、小椋義俊、林哲也、岩崎渉、上田賢志、髙野英晃
    • Organizer
      2022年度(第36回)日本放線菌学会大会
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Presentation] Trait-based アプローチでせまる 細菌の群集構造とその安定性2022

    • Author(s)
      鈴木誉保、松井求、森ヶ崎進、大津厳生、土肥裕希、河野祐介、林久喜、高谷直樹、岩崎渉
    • Organizer
      第35回日本微生物生態学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] Bioinformatics for revealing rules behind gene-content evolution2022

    • Author(s)
      Wataru Iwasaki
    • Organizer
      GIW XXXI/ISCB-Asia V (GIW/ISCB Asia 2022)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22H04925
  • [Presentation] 菌の植物ホルモン合成クラスターの活性化が植物共生糸状菌Colletotrichum tofieldiaeの寄生化を促す2021

    • Author(s)
      晝間敬、青木誠志郎、川邑菜々美、内山朱美、岩崎渉、西條雄介
    • Organizer
      令和3年度日本植物病理学会大会
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] 施肥条件の異なる農地土壌の時系列ショットガンメタゲノム解析2021

    • Author(s)
      Motohiro Akashi, Motomu Matsui, Susumu Morigasaki, Hisayoshi Hayashi, Naoki Takaya, and Wataru Iwasaki
    • Organizer
      日本微生物生態学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] 微生物ゲノム、正面から見るか、裏から見るか。あるいは、いわゆるタンパク質立体構造予測問題の“解決”に思うこと。2021

    • Author(s)
      岩崎渉
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] 微生物ゲノム、正面から見るか、裏から見るか。あるいは、いわゆるタンパク質立体構造予測問題の“解決”に思うこと。2021

    • Author(s)
      岩崎渉
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-19H04853
  • [Presentation] 機能インフォマティクスが解き明かすポストコッホ生態系2021

    • Author(s)
      Motomu Matsui and Wataru Iwasaki
    • Organizer
      新学術領域「ポストコッホ生態」第3回領域会議
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] 菌の植物ホルモン合成クラスターの活性化が植物共生糸状菌Colletotrichum tofieldiaeの寄生化を促す.2021

    • Author(s)
      晝間敬,青木誠志郎,川邑菜々美,内山朱美,岩崎渉,西條雄介.
    • Organizer
      日本植物病理学会
    • Data Source
      KAKENHI-PROJECT-17K07509
  • [Presentation] 機能インフォマティクスが解き明かすポストコッホ生態系2020

    • Author(s)
      Motomu Matsui and Wataru Iwasaki
    • Organizer
      新学術領域「ポストコッホ生態」第2回領域会議
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] 放線菌Streptomyces avermitilisのカルコフォア生産制御機構の解析2020

    • Author(s)
      萩谷 祥、Salvatore Cosentino、按田 瑞恵、後藤 恭宏、中村 佳司、林 哲也、岩崎 渉、上田 賢志、髙野 英晃
    • Organizer
      日本農芸化学会2020年度大会
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] Graph Splitting: A Graph-Based Approach for Superfamily-Scale Phylogenetic Tree Reconstruction2020

    • Author(s)
      Motomu Matsui and Wataru Iwasaki
    • Organizer
      IIBMP2020
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] データ駆動からキュリオシティ駆動生物学へ2020

    • Author(s)
      岩崎渉
    • Organizer
      2020年度日本数理生物学会年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] データ駆動からキュリオシティ駆動生物学へ2020

    • Author(s)
      岩崎渉
    • Organizer
      2020年度日本数理生物学会年会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-19H04853
  • [Presentation] 真核生物におけるアミノアシルtRNA合成酵素(ARS)レパートリーの推定による翻訳系の進化過程の解明へ.2020

    • Author(s)
      浜口悠貴,松井求,青木誠志郎,岩崎渉.
    • Organizer
      Tokyo Bioinformatics Meeting
    • Data Source
      KAKENHI-PROJECT-17K07509
  • [Presentation] ビッグデータが出た後にどうするか : 「解釈」のための二次元オーミクス解析2020

    • Author(s)
      岩崎渉
    • Organizer
      第3回環境DNA学会・第36回個体群生態学会合同大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] 真核生物アミノアシルtRNA合成酵素(ARS)の局在予測ツールの開発.2020

    • Author(s)
      浜口悠貴,松井求,青木誠志郎,岩崎渉.
    • Organizer
      生命情報科学若手の会
    • Data Source
      KAKENHI-PROJECT-17K07509
  • [Presentation] 生物進化・生態のバイオインフォマティクス2019

    • Author(s)
      岩崎渉
    • Organizer
      第42回日本分子生物学会年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] 光を使うか、それとも避けるか? ―海洋細菌の二種類の光適応戦略の解明2019

    • Author(s)
      熊谷洋平, 吉澤晋, 木暮一啓, 岩崎渉
    • Organizer
      第32回日本微生物生態学会
    • Invited
    • Data Source
      KAKENHI-PROJECT-18H04136
  • [Presentation] Uncovering Strategies and Evolution of Microbes by Comparative Genomics, Comparative Metagenomics, and Metaepigenomics.2019

    • Author(s)
      Wataru Iwasaki
    • Organizer
      The 6th Quest for Orthologs Meeting / The 67th NIBB Conference
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H04853
  • [Presentation] 生物進化・生態のバイオインフォマティクス2019

    • Author(s)
      岩崎渉
    • Organizer
      第42回日本分子生物学会年会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-19H04853
  • [Presentation] Streptomyces griseusにおけるSigK-RskA制御系を介した光誘導機構の解析2019

    • Author(s)
      長束 千尋, Salvatore Cosentino, 按田 瑞恵, 角 悟, 後藤 恭宏, 中村 佳司, 林 哲也, 岩崎 渉, 上田 賢志, 髙野 英晃
    • Organizer
      2019年度(第34回)日本放線菌学会大会
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] データ駆動アプローチによるゲノム微生物学の拡張2019

    • Author(s)
      岩崎渉
    • Organizer
      第13回日本ゲノム微生物学会年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] データ駆動アプローチによるゲノム微生物学の拡張2019

    • Author(s)
      岩崎渉
    • Organizer
      第13回日本ゲノム微生物学会年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] 環境DNA研究のバイオインフォマティクス2019

    • Author(s)
      岩崎渉
    • Organizer
      日本生態学会第66回大会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] 比較ゲノム解析・微生物群集解析・表現型データ解析のバイオインフォマティクス2019

    • Author(s)
      岩崎渉
    • Organizer
      第92回日本生化学会大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] グラフに基づく新たな系統解析手法で隠れた遠距離進化を発掘する2019

    • Author(s)
      Motomu Matsui and Wataru Iwasaki
    • Organizer
      第21回日本進化学会
    • Data Source
      KAKENHI-PLANNED-19H05688
  • [Presentation] 放線菌Streptomyces griseusにおけるSigK-RskA制御系を介した光誘導機構2019

    • Author(s)
      長束 千尋, Salvatore Cosentino, 按田 瑞恵, 角 悟, 後藤 恭宏, 中村 佳司, 林 哲也, 岩崎 渉, 上田 賢志, 髙野 英晃
    • Organizer
      第18回微生物研究会
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] 比較ゲノム解析・微生物群集解析・表現型データ解析のバイオインフォマティクス2019

    • Author(s)
      岩崎渉
    • Organizer
      第92回日本生化学会大会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-19H04853
  • [Presentation] メタゲノム中のダークマター機能性遺伝子の解析2019

    • Author(s)
      吉澤晋, 西村陽介, 岩崎渉
    • Organizer
      第32回日本微生物生態学会
    • Invited
    • Data Source
      KAKENHI-PROJECT-18H04136
  • [Presentation] In situ metatranscriptomics reveals physiology of chemosynthetic ecto-symbiosis of the deep-sea squat lobster, Shinkaia crosnieri.2018

    • Author(s)
      Kaori Motoki, Tomo-o Watsuji, Yoshihiro Takaki, Maki Tokuda, Takafumi Kasaya, Ken Takai, and Wataru Iwasaki.
    • Organizer
      17th International Symposium on Microbial Ecology (ISME17)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] Generalist species drive microbial dispersion and evolution.2018

    • Author(s)
      Sira Sriswasdi, Ching-Chia Yang, and Wataru Iwasaki
    • Organizer
      The 26th international conference on Intelligent Systems for Molecular Biology (ISMB2018)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] Mitonuclear incompatibilities promoted mitogenome evolution in a hybrid population2018

    • Author(s)
      Shotaro Hirase, Ayumi Tezuka, Atsushi J. Nagano, Mana Sato, Sho Hosoya, Kiyoshi Kikuchi, Wataru Iwasaki
    • Organizer
      Evolution2018
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H02493
  • [Presentation] Light-adaptation strategies of marine Flavobacteria2018

    • Author(s)
      Susumu Yoshizawa, Yohei Kumagai, Kazuhiro Kogure and Wataru Iwasaki
    • Organizer
      1st International Conference on Marine Flavobacteria
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H04136
  • [Presentation] Meta-analysis of community sequencing datasets reveals a key role of generalist species in microbial dispersion and evolution.2018

    • Author(s)
      Wataru Iwasaki, Sira Sriswasdi, and Ching-chia Yang
    • Organizer
      17th International Symposium on Microbial Ecology (ISME17)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] ジェネラリストが駆動する微生物の分散と進化2018

    • Author(s)
      岩崎渉
    • Organizer
      日本微生物生態学会第32回大会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] Mitonuclear incompatibilities promoted mitogenome evolution in a hybrid population2018

    • Author(s)
      Shotaro Hirase, Ayumi Tezuka, Atsushi J. Nagano, Mana Sato, Sho Hosoya, Kiyoshi Kikuchi, Wataru Iwasaki
    • Organizer
      The 46th Naito Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H02493
  • [Presentation] Meta-analysis of community sequencing datasets reveals a key role of generalist species in microbial dispersion and evolution.2018

    • Author(s)
      Wataru Iwasaki, Sira Sriswasdi, and Ching-chia Yang.
    • Organizer
      17th International Symposium on Microbial Ecology (ISME17)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] 大規模ゲノム進化研究のためのデータベース・ソフトウェア2018

    • Author(s)
      岩崎渉
    • Organizer
      日本進化学会第20回大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] From Beta- to Alpha-proteobacteria: The origin and evolution of rhizobial nodulation genes nodIJ2018

    • Author(s)
      Seishiro Aoki, Motomi Ito, Wataru Iwasaki
    • Organizer
      7th International Legume Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K07509
  • [Presentation] 大規模ゲノム進化研究のためのデータベース・ソフトウェア2018

    • Author(s)
      岩崎渉
    • Organizer
      日本進化学会第20回大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] ジェネラリストが駆動する微生物の分散と進化2018

    • Author(s)
      岩崎渉
    • Organizer
      日本微生物生態学会第32回大会
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] 光を使うか、それとも避けるか?海洋性フラボバクテリアの光適応戦略2018

    • Author(s)
      Susumu Yoshizawa, Yohei Kumagai, Kazuhiro Kogure and Wataru Iwasaki
    • Organizer
      第32回日本微生物生態学会
    • Data Source
      KAKENHI-PROJECT-18H04136
  • [Presentation] Mitonuclear incompatibilities promoted mitogenome evolution2018

    • Author(s)
      Shotaro Hirase, Ayumi Tezuka, Atsushi J. Nagano, Mana Sato, Sho Hosoya, Kiyoshi Kikuchi, Wataru Iwasaki
    • Organizer
      Stickleback2018
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H02493
  • [Presentation] Generalist species drive microbial dispersion and evolution.2018

    • Author(s)
      Sira Sriswasdi, Ching-Chia Yang, and Wataru Iwasaki
    • Organizer
      The 26th international conference on Intelligent Systems for Molecular Biology (ISMB2018)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] Cross-feeding pathways from a methanotroph to a marine methylotroph, Methy1loceanibacter caenitep idi Gela4, under co-culture condition2017

    • Author(s)
      Mio Takeuchi, Haruka Ozaki, Satoshi Hiraoka, Yoichi Kamagata, Susumu Sakata, Wataru Iwasaki
    • Organizer
      the 23rdInternational Symposium on Environmental Biogeochemistry (ISEB23)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-25450265
  • [Presentation] データベース・カルチャーコレクションでひもとく微生物の進化2017

    • Author(s)
      岩崎渉
    • Organizer
      環境微生物系学会合同大会2017
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] 分子系統学とバイオインフォマティクス2017

    • Author(s)
      岩崎渉
    • Organizer
      第207回農林交流センターワークショップ
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] How do microbes spread across environmental barriers?2017

    • Author(s)
      Wataru Iwasaki
    • Organizer
      The 9th Asian Symposium on Microbial Ecology
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] Bioinformatics: Bridging life and computational sciences.2017

    • Author(s)
      Wataru Iwasaki
    • Organizer
      7th Annual Conference and General Meeting of the Global Young Academy
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] ゲノム解析・RNAseqによるメタン酸化細菌とメタノール資化性菌の共生機構の解明2017

    • Author(s)
      竹内美緒,尾崎 遼、平岡聡史、大島健志朗,服部正平,鎌形洋一,岩崎渉
    • Organizer
      環境微生物系学会合同大会
    • Data Source
      KAKENHI-PROJECT-25450265
  • [Presentation] データベース・カルチャーコレクションでひもとく微生物の進化2017

    • Author(s)
      岩崎渉
    • Organizer
      環境微生物系学会合同大会2017
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] ハイブリッドゲノム形成後の大規模な遺伝子進化速度の低下2017

    • Author(s)
      岩崎渉,Sira Sriswasdi,高島昌子,眞鍋理一郎,大熊盛也,杉田隆
    • Organizer
      日本進化学会第19回大会
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] SonicParanoid : extremely fast, easy and accurate orthology inference.2017

    • Author(s)
      Salvatore Cosentino and Wataru Iwasaki
    • Organizer
      5th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 16th European Conference on Computational Biology (ECCB)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] データベース・カルチャーコレクションでひもとく微生物の進化2017

    • Author(s)
      岩崎渉
    • Organizer
      環境微生物系学会合同大会2017
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] Global deceleration of gene evolution following recent genome hybridizations in fungi.2017

    • Author(s)
      Wataru Iwasaki
    • Organizer
      NIG International symposium 2017 Life, Environment, and Evolution Revealed by Genomes
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] ハイブリッドゲノム進化における大規模な遺伝子進化速度の低下2017

    • Author(s)
      岩崎渉
    • Organizer
      第6回生命医薬情報学連合大会
    • Data Source
      KAKENHI-PUBLICLY-17H05834
  • [Presentation] SonicParanoid : 超高速・簡単・正確なオルソログ同定2017

    • Author(s)
      Salvatore Cosentino and Wataru Iwasaki
    • Organizer
      NGS現場の会第五回研究会
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] ゲノムデータに基づく Trichosporonales 目の系統解析2017

    • Author(s)
      高島昌子、Sira Sriswasdi、西村祐貴、眞鍋理一郎、杉田隆、遠藤力也、岩崎渉、大熊盛也
    • Organizer
      第11回日本ゲノム微生物学会
    • Place of Presentation
      慶應義塾大学湘南藤沢キャンパス(神奈川県藤沢市)
    • Year and Date
      2017-03-02
    • Data Source
      KAKENHI-PROJECT-26650148
  • [Presentation] トリコスポロン属酵母ハイブリッドゲノムにおける遺伝子進化速度の低下2017

    • Author(s)
      岩崎渉,Sriswasdi Sira,高島昌子,眞鍋理一郎,大熊盛也,杉田隆
    • Organizer
      第11回日本ゲノム微生物学会年会
    • Place of Presentation
      慶應義塾大学湘南藤沢キャンパス(神奈川県藤沢市)
    • Year and Date
      2017-03-02
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] How do microbes spread across environmental barriers?2017

    • Author(s)
      Wataru Iwasaki
    • Organizer
      The 9th Asian Symposium on Microbial Ecology
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06279
  • [Presentation] バイオインフォマティクスでひもとく生命進化の道のり2016

    • Author(s)
      岩崎渉
    • Organizer
      早稲田大学先進理工学部電気・情報生命工学科講演会
    • Place of Presentation
      早稲田大学西早稲田キャンパス(東京都新宿区)
    • Invited
    • Data Source
      KAKENHI-PROJECT-16H06154
  • [Presentation] Upgrading a sequence-based yeast classification system: A genome-wide phylogenetic study of the order Trichosporonales.2016

    • Author(s)
      Masako Takashima, Ri-ichiroh Manabe, Sira Sriswasdi, Wataru Iwasaki, Rikiya Endoh, Moriya Ohkuma, Takashi Sugita
    • Organizer
      14th International Congress on Yeasts
    • Place of Presentation
      淡路夢舞台国際会議センター(兵庫県淡路市)
    • Year and Date
      2016-09-14
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-26650148
  • [Presentation] A highly resolved phylogenetic tree of Trichosporonales species based on multiple gene sequence analysis.2015

    • Author(s)
      Masako Takashima, Ri-ichiroh Manabe, Wataru Iwasaki, Akira Ohyama, Moriya Ohkuma, and Takashi Sugita.
    • Organizer
      32nd International Specialized Symposium on Yeasts
    • Place of Presentation
      Hotel Gio Centro Congressi, Perugia, Italy
    • Year and Date
      2015-09-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Presentation] MetaMetaDB:微生物ゲノムと環境を簡便に結びつけるデータベース2015

    • Author(s)
      岩崎渉,楊靜佳
    • Organizer
      第9回日本ゲノム微生物学会年会
    • Place of Presentation
      神戸大学六甲第二キャンパス(兵庫県神戸市)
    • Year and Date
      2015-03-06
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] A highly resolved phylogenetic tree of Trichosporonales species based on multiple gene sequence analysis2015

    • Author(s)
      Masako Takashima, Ri-ichiroh Manabe, Wataru Iwasaki, Akira Ohyama, Moriya Ohkuma, Takashi Sugita
    • Organizer
      International Specialized Symposium on Yeasts, ISSY32
    • Place of Presentation
      ペルージャ、イタリア
    • Year and Date
      2015-09-13
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-26650148
  • [Presentation] 定量生物学と情報生物学2015

    • Author(s)
      岩崎渉
    • Organizer
      定量生物学の会第七回年会
    • Place of Presentation
      九州大学筑紫キャンパス(福岡県春日市)
    • Year and Date
      2015-01-11
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Miya, M., Y. Sato, T, Fukunaga, T. Sado, J. Y. Poulsen, K. Sato, T. Minamoto, S. Yamamoto, H. Yamanaka, H. Araki, M. Kondoh and W. Iwasaki2015

    • Author(s)
      Miya, M., Y. Sato, T, Fukunaga, T. Sado, J. Y. Poulsen, K. Sato, T. Minamoto, S. Yamamoto, H. Yamanaka, H. Araki, M. Kondoh and W. Iwasaki
    • Organizer
      6th International Barcode of Life Conference
    • Place of Presentation
      University of Guelph
    • Year and Date
      2015-08-19
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-26291083
  • [Presentation] 環境DNAメタバーコーディング解析のためのパイプライン開発2015

    • Author(s)
      佐藤行人・荒木仁志・宮 正樹・佐土哲也・峰岸有紀・岩崎渉
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学
    • Year and Date
      2015-08-22
    • Data Source
      KAKENHI-PROJECT-26291083
  • [Presentation] 定量生物学と情報生物学2015

    • Author(s)
      岩崎渉
    • Organizer
      定量生物学の会第七回年会
    • Place of Presentation
      九州大学筑紫キャンパス(春日)
    • Year and Date
      2015-01-11
    • Invited
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Presentation] MiFish, a set of universal primers for metabarcoding environmental DNA from fishes: Detection of >230 species from aquarium tanks and coral reefs in the subtropical western North Pacific.2015

    • Author(s)
      Masaki Miya, Yukuto Sato, Tsukasa Fukunaga, Tetsuya Sado, Jan Yde Poulsen, Keiichi Sato, Toshifumi Minamoto, Satoshi Yamamoto, Hiroki Yamanaka, Hitoshi Araki, Michio Kondoh, and Wataru Iwasaki.
    • Organizer
      6th International Barcode of Life Conference
    • Place of Presentation
      University of Guelph, Canada
    • Year and Date
      2015-08-19
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Presentation] バイオインフォマティクスから時空間解析へ2014

    • Author(s)
      岩崎渉
    • Organizer
      日本学術会議学術フォーラム「生命情報ビッグデータ時代における新しい生命科学」
    • Place of Presentation
      日本学術会議講堂(東京)
    • Year and Date
      2014-08-29
    • Invited
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Presentation] 大規模比較ゲノム解析が明らかにするプロテオロドプシンを持つ海洋細菌のゲノム進化2014

    • Author(s)
      熊谷洋平,吉澤晋,木暮一啓,岩崎渉
    • Organizer
      第8回日本ゲノム微生物学会年会
    • Place of Presentation
      東京農業大学世田谷キャンパス(東京)
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Presentation] 微生物の生息環境の多様性とその進化:MetaMetaDBによる解析2014

    • Author(s)
      岩崎渉,楊 靜佳
    • Organizer
      環境微生物系学会合同大会2014
    • Place of Presentation
      浜松アクトシティコングレスセンター(静岡県浜松市)
    • Year and Date
      2014-10-24
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Fundamental bottlenecks in big-data biology2014

    • Author(s)
      岩崎渉
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター(札幌)
    • Year and Date
      2014-09-27
    • Invited
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Presentation] バイオインフォマティクスから時空間解析へ2014

    • Author(s)
      岩崎渉
    • Organizer
      日本学術会議学術フォーラム 生命情報ビッグデータ時代における新しい生命科学
    • Place of Presentation
      日本学術会議講堂(東京都港区)
    • Year and Date
      2014-08-29
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] CLOCKによる古典的・非古典的E-boxを介した概日時計の“多声的”制御2014

    • Author(s)
      Hikari Yoshitane, Haruka Ozaki, Hideki Terajima, Ngoc-Hien Du, Yutaka Suzuki, Taihei Fujimori, Naoki Kosaka, Shigeki Shimba, Sumio Sugano, Toshihisa Takagi, Wataru Iwasaki, and Yoshitaka Fukada.
    • Organizer
      日本バイオインフォマティクス学会2014年年会/第3回生命医薬情報学連合大会
    • Place of Presentation
      仙台国際センター(宮城県仙台市)
    • Year and Date
      2014-10-03
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Fundamental bottlenecks in big-data biology2014

    • Author(s)
      岩崎渉
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-27
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 魚類環境DNA 用ユニバーサルプライマーの開発と次世代シーケンサを用いた環境水分析法の確立2014

    • Author(s)
      宮 正樹・佐藤行人・福永津嵩・佐土哲也・佐藤圭一・源 利文・山中裕樹・荒木仁志・岩崎 渉
    • Organizer
      日本魚類学会年会
    • Place of Presentation
      神奈川県立・生命の星・地球博物館
    • Year and Date
      2014-11-16
    • Data Source
      KAKENHI-PROJECT-26291083
  • [Presentation] CLOCKによる古典的・非古典的E-boxを介した概日時計の"多声的"制御2014

    • Author(s)
      Hikari Yoshitane, Haruka Ozaki, Hideki Terajima, Ngoc-Hien Du, Yutaka Suzuki, Taihei Fujimori, Naoki Kosaka, Shigeki Shimba, Sumio Sugano, Toshihisa Takagi, Wataru Iwasaki, and Yoshitaka Fukada.
    • Organizer
      日本バイオインフォマティクス学会2014年年会・第3回生命医薬情報学連合大会
    • Place of Presentation
      仙台国際センター(仙台)
    • Year and Date
      2014-10-03
    • Data Source
      KAKENHI-PROJECT-221S0002
  • [Presentation] 魚類環境DNA 用ユニバーサルプライマーの開発と次世代シーケンサを用いた環境水分析法の確立:美ら海水族館の環境水から検出に成功した板鰓類2014

    • Author(s)
      宮 正樹・佐藤行人・福永津嵩・佐土哲也・佐藤圭一・源 利文・山中裕樹・荒木仁志・岩崎 渉
    • Organizer
      板鰓類シンポジウム2014「サメ・エイ類研究の最前線~現状と将来展望」
    • Place of Presentation
      東京大学農学部弥生講堂・一条ホール
    • Year and Date
      2014-12-04
    • Data Source
      KAKENHI-PROJECT-26291083
  • [Presentation] 次世代シーケンサーによる魚類ミトコンドリアゲノミクス: Parallel Tag Sequencingのプロトコル確立2013

    • Author(s)
      平瀬祥太朗,武島弘彦,西田睦,岩崎渉
    • Organizer
      NGS現場の会第三回研究会
    • Place of Presentation
      神戸国際会議場,兵庫
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] バイオインフォマティクスから迫るアーキアの正体と多様性2013

    • Author(s)
      岩崎渉
    • Organizer
      第29回日本微生物生態学会大会
    • Place of Presentation
      鹿児島大学郡元キャンパス,鹿児島
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 次世代シーケンシングによる魚類の大量ミトコンドリアゲノム分析法の確立2013

    • Author(s)
      武島弘彦,平瀬祥太朗,岩崎渉,田畑諒一,渡辺勝敏,西田睦
    • Organizer
      2013年度日本魚類学会年会
    • Place of Presentation
      宮崎観光ホテル,宮崎
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Gaussian mixture model-based multiple objects tracking for analysis of animal social behaviors2013

    • Author(s)
      Tsukasa Fukunaga and Wataru Iwasaki
    • Organizer
      Bioinformatics Week in Odaiba (BiWO2013)
    • Place of Presentation
      産業総合技術研究所臨海副都心センター,東京
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 鹿児島湾海底堆積物中に生息するメタンを基盤とする新規中温性微生物群の生理学的・遺伝学的特徴の解明2013

    • Author(s)
      竹内美緒,丸茂克美,根建宗具,前田広人,鎌形洋一,大島健志郎,岩崎渉,片山泰樹,山岸昂夫,花田智,坂田将
    • Organizer
      第29回日本微生物生態学会大会
    • Place of Presentation
      鹿児島大学郡元キャンパス,鹿児島
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 次世代シーケンシングによるアユの集団ミトコンドリアゲノミクスへのアプローチ2013

    • Author(s)
      武島弘彦,平瀬祥太朗,岩崎渉,井口恵一朗,西田睦
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド,兵庫
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] ChIP-Seqデータからの結合モチーフの列挙とその応用2013

    • Author(s)
      尾崎遼,岩崎渉,高木利久
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド,兵庫
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] MitoAnnotator : 超高速シーケンサー時代のミトコンドリアゲノムアノテーションシステム2013

    • Author(s)
      福永津嵩,岩崎渉
    • Organizer
      NGS現場の会第三回研究会
    • Place of Presentation
      神戸国際会議場,兵庫
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] MitoFish and MitoAnnotator: A Mitochondrial Genome Database of Fish with an Accurate and Automatic Annotation Pipeline2013

    • Author(s)
      Wataru Iwasaki, Tsukasa Fukunaga, Ryota Isagozawa, Koichiro Yamada, Yasunobu Maeda, Takashi P. Satoh, Tetsuya Sado, Kohji Mabuchi, Hirohiko Takeshima, Masaki Miya, and Mutsumi Nishida
    • Organizer
      日本バイオインフォマティクス学会2013年年会/第2回生命医薬情報学連合大会
    • Place of Presentation
      タワーホール船堀,東京
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] インタラクティブ・マルチスケール・ネットワーク・ナビゲーション2013

    • Author(s)
      岩崎渉,タネート プラーニーナラーラト,高木利久
    • Organizer
      第52回 人工知能学会 分子生物情報研究会(SIG-MBI)・第17回オープンバイオ研究会
    • Place of Presentation
      北陸先端科学技術大学院大学(能美)
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] MetaMetaDB: Microbial Habitability解析のためのメタ・メタゲノムデータベース2013

    • Author(s)
      岩崎渉、楊靜佳
    • Organizer
      第29回日本微生物生態学会大会
    • Place of Presentation
      鹿児島大学郡元キャンパス,鹿児島
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 空と海と陸をめぐる微生物の「旅」2013

    • Author(s)
      岩崎渉,町山麻子,平岡聡史,藤井和史,伊知地稔,井上健太郎,木暮一啓
    • Organizer
      NGS現場の会第三回研究会
    • Place of Presentation
      神戸国際会議場,兵庫
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] トランスクリプトーム時系列解析で迫る広塩性魚の浸透圧調節メカニズムの進化2013

    • Author(s)
      尾崎遼,Marty Wong,竹井祥郎,岩崎渉
    • Organizer
      NGS現場の会第三回研究会
    • Place of Presentation
      神戸国際会議場,兵庫
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] MetaMetaDB: Revealing all the habitats of microbes2013

    • Author(s)
      Ching-chia Yang and Wataru Iwasaki
    • Organizer
      The 5th Taiwan-Korea-Japan International Symposium on Microbial Ecology
    • Place of Presentation
      National Central University, Jhongli, Taiwan
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] MetaMetaDB: From metagenomes to the habitats of microbes2013

    • Author(s)
      Ching-chia Yang and Wataru Iwasaki
    • Organizer
      NGS現場の会第三回研究会
    • Place of Presentation
      神戸国際会議場,兵庫
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 高性能自動アノテーションパイプラインMitoAnnotatorの実装による魚類ミトコンドリアゲノムデータベースMitoFishの充実2013

    • Author(s)
      西田睦,福永津嵩,砂子澤遼太,山田浩一郎,佐藤崇,佐土哲也,宮正樹,武島弘彦,馬渕浩司,前田泰伸,岩崎渉
    • Organizer
      2013年度日本魚類学会年会
    • Place of Presentation
      宮崎観光ホテル,宮崎
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 海水淡水化逆浸透膜に発生したバイオフィルムのメタゲノミクス2013

    • Author(s)
      伊知地稔,町山麻子,高橋唯,千浦博,伊藤世人,北出有,花田茂久,田中祐之,岩崎渉,木暮 一啓
    • Organizer
      第29回日本微生物生態学会大会
    • Place of Presentation
      鹿児島大学郡元キャンパス,鹿児島
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Novel marine moderately thermophilic microbes isolated from microbial consortium depends on methane2013

    • Author(s)
      Mio Takeuchi, Katsumi Marumo, Hiroto Maeda, Munetomo Nedachi, Kenshiro Oshima, Taiki Katayama, Takao Yamagishi, Wataru Iwasaki, Yoichi Kamagata, Satoshi Hanada, Hideyuki Tamaki, Masahira Hattori, Yuichi Suwa, and Susumu Sakata
    • Organizer
      The 5th Taiwan-Korea-Japan International Symposium on Microbial Ecology
    • Place of Presentation
      National Central University, Jhongli, Taiwan
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Cell-free synthesis, purifications, and crystallization of Proteorhodopsins2013

    • Author(s)
      Toshiaki Hosaka, Susumu Yoshizawa, Tomomi Kumura-Someya, Masakatsu Hato, Wataru Iwasaki, Kazuhiro Kogure, Shigeyuki Yokoyama, and Mikako Shirouzu
    • Organizer
      7th International Conference on Structural Genomics
    • Place of Presentation
      京王プラザホテル札幌,北海道
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] TogoDoc server/client system: smart recommendation and efficient management of life science literature.2011

    • Author(s)
      Wataru Iwasaki, Yasunori Yamamoto, and Toshihisa Takagi.
    • Organizer
      The 2011 Annual Conference of the Japanese Society for Bioinformatics / Chem-Bio Informatics Society Annual Meeting 2011 (CBI/JSBi2011)
    • Place of Presentation
      Kobe International Conference Center, Kobe, Japan
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 期待値最大化法に基づいたゲノム進化過程の再構築2011

    • Author(s)
      岩崎渉
    • Organizer
      共同利用重点型研究による研究集会「ゲノム多様性と進化の統計数理」
    • Place of Presentation
      統計数理研究所,東京
    • Year and Date
      2011-10-26
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 大規模な生命科学データを解釈するためのバイオインフォマティクス技術2011

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会・沖縄セミナー
    • Place of Presentation
      独立行政法人沖縄科学技術研究基盤整備機構,恩納
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 微生物ゲノムはどのように進化してきたのか?2011

    • Author(s)
      岩崎渉
    • Organizer
      第5回日本ゲノム微生物学会若手の会研究会
    • Place of Presentation
      ろうきん研修所富士センター,駿東郡小山町(招待講演)
    • Year and Date
      2011-09-29
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 超高速遺伝子配列解読技術とバイオインフォマティクス2011

    • Author(s)
      岩崎渉
    • Organizer
      第48回海中海底工学フォーラム(招待講演)
    • Place of Presentation
      東京大学柏キャンパス,柏
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] TogoDoc: Paper Recommendation and Management.2011

    • Author(s)
      Wataru Iwasaki, Yasunori Yamamoto, and Toshihisa Takagi.
    • Organizer
      5th Asian Young Researchers Conference for Computational and Omics Biology
    • Place of Presentation
      University of Sciences and Technology, Daejeon, Korea.
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 系統推定結果の表現と認識2011

    • Author(s)
      岩崎渉
    • Organizer
      第155回農林交流センターワークショップ
    • Place of Presentation
      農林水産省農林水産技術会議事務局筑波事務所,つくば(招待講演)
    • Year and Date
      2011-10-27
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 微生物ゲノムはどのように進化してきたのか?2011

    • Author(s)
      岩崎渉
    • Organizer
      第5回 日本ゲノム微生物学会 若手の会 研究会(招待講演)
    • Place of Presentation
      ろうきん研修所富士センター,駿東郡小山町
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 大規模な生命科学データを解釈するためのバイオインフォマティクス技術2011

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会・沖縄セミナー
    • Place of Presentation
      独立行政法人沖縄科学技術研究基盤整備機構,恩納
    • Year and Date
      2011-09-03
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 期待値最大化法に基づいたゲノム進化過程の再構築2011

    • Author(s)
      岩崎渉
    • Organizer
      共同利用重点型研究による研究集会 「ゲノム多様性と進化の統計数理」
    • Place of Presentation
      統計数理研究所,東京
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 文献管理+文献推薦=TogoDoc2011

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会第3回研究会
    • Place of Presentation
      基礎生物学研究所,岡崎
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] NGSを用いた転写制御の時系列解析2011

    • Author(s)
      岩崎渉
    • Organizer
      次世代シークエンサ現場の会第一回研究会
    • Place of Presentation
      熱海ニューフジヤホテル,熱海
    • Year and Date
      2011-05-28
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] Wheel Tree : Intuitive Representation of Multiple Phylogenetic Topologies2011

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      2011 Annual Meeting of Society for Molecular Biology and Evolution
    • Place of Presentation
      Kyoto University, Kyoto, Japan
    • Year and Date
      2011-07-28
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 大規模ゲノム解析から読み解く生命システムの進化2011

    • Author(s)
      岩崎渉
    • Organizer
      第27回微生物生態学会若手交流会
    • Place of Presentation
      京都大学,京都(招待講演)
    • Year and Date
      2011-10-07
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 文献管理と文献推薦を一体化する生命科学研究者のための統合文献ソリューション2011

    • Author(s)
      岩崎渉
    • Organizer
      SPARC Japan セミナー2011(招待講演)
    • Place of Presentation
      国立情報学研究所,東京
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] TogoDoc server/client system : smart recommendation and efficient management of life science literature2011

    • Author(s)
      Wataru Iwasaki, Yasunori Yamamoto, Toshihisa Takagi
    • Organizer
      The 2011 Annual Conference of the Japanese Society for Bioinformatics/Chem-Bio Informatics Society Annual Meeting 2011 (CBI/JSBi2011)
    • Place of Presentation
      Kobe International Conference Center, Kobe, Japan
    • Year and Date
      2011-11-08
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] NGSを用いた転写制御の時系列解析2011

    • Author(s)
      岩崎渉
    • Organizer
      次世代シークエンサ現場の会第一回研究会
    • Place of Presentation
      熱海ニューフジヤホテル,熱海
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 系統推定結果の表現と認識2011

    • Author(s)
      岩崎渉
    • Organizer
      第155回農林交流センターワークショップ(招待講演)
    • Place of Presentation
      農林水産省農林水産技術会議事務局筑波事務所,つくば
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 大規模ゲノム解析から読み解く生命システムの進化2011

    • Author(s)
      岩崎渉
    • Organizer
      第27回微生物生態学会若手交流会(招待講演)
    • Place of Presentation
      京都大学,京都
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] TogoDoc : Paper Recommendation and Management2011

    • Author(s)
      Wataru Iwasaki, Yasunori Yamamoto, Toshihisa Takagi
    • Organizer
      5th Asian Young Researchers Conference for Computational and Omics Biology
    • Place of Presentation
      University of Sciences and Technology, Daejeon, Korea
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 文献管理+文献推薦=TogoDoc2011

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会第3回研究会
    • Place of Presentation
      基礎生物学研究所,岡崎
    • Year and Date
      2011-10-16
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] Wheel Tree: Intuitive Representation of Multiple Phylogenetic Topologies.2011

    • Author(s)
      Wataru Iwasaki and Toshihisa Takagi.
    • Organizer
      2011 Annual Meeting of Society for Molecular Biology and Evolution
    • Place of Presentation
      Kyoto University, Kyoto, Japan
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 超高速遺伝子配列解読技術とバイオインフォマティクス2011

    • Author(s)
      岩崎渉
    • Organizer
      第48回海中海底工学フォーラム
    • Place of Presentation
      東京大学柏キャンパス,柏(招待講演)
    • Year and Date
      2011-10-14
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] 文献管理と文献推薦を一体化する生命科学研究者のための統合文献ソリューション2011

    • Author(s)
      岩崎渉
    • Organizer
      SPARC Japanセミナー2011
    • Place of Presentation
      国立情報学研究所,東京(招待講演)
    • Year and Date
      2011-12-06
    • Data Source
      KAKENHI-PUBLICLY-23129502
  • [Presentation] Interactive, Multi-Scale Navigation of Large and Complicated Biological Networks2010

    • Author(s)
      Thanet Praneenararat, Toshihisa Takagi, Wataru Iwasaki.
    • Organizer
      生命情報科学若手の会第2回研究会
    • Place of Presentation
      国立遺伝学研究所,三島
    • Year and Date
      2010-10-10
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 車輪樹法:曖昧な進化系統解析結果をどう認識するか2010

    • Author(s)
      岩崎渉
    • Organizer
      日本進化学会 第12回 東京大会,
    • Place of Presentation
      東京工業大学大岡山キャンパス,東京
    • Year and Date
      2010-08-04
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] A Travelling Salesman Approach to Phylogenetic Trees.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi.
    • Organizer
      4th Asian Young Researchers Conference on Computational and Omics Biology (AYRCOB)
    • Place of Presentation
      Biopolis, Singapore, Singapore
    • Year and Date
      2010-12-02
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Updated Phylogenetic Tree for the Era of 1000 Genomes.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      3rd Asian Young Researchers Conference for Computational and Omics Biology
    • Place of Presentation
      National Cheng Kung University, Tainan, Taiwan.
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Effective Multi-Scale Graph Navigation System Powered by Fast and Biologically Meaningful Hierarchical Clustering2010

    • Author(s)
      Thanet Prancenararat, 岩崎渉, 高木利久
    • Organizer
      3rd Asian Young Researchers Conference for Computational and Omics Biology
    • Place of Presentation
      National Cheng Kung University, Tainan, Taiwan
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Centroid Representation of Phylogenetic Trees Solved as a Travelling Salesman Problem.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi.
    • Organizer
      The Annual CBRC Open House Workshop (CBRC2010) on Bioinformatics
    • Place of Presentation
      産総研臨海副都心センター,東京
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 1000ゲノム時代に進化を読み解く:分子系統樹では物足りないときどうするか2010

    • Author(s)
      岩崎渉
    • Organizer
      第37回駒場進化セミナー
    • Place of Presentation
      東京大学駒場キャンパス,東京
    • Year and Date
      2010-03-08
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Centroid Representation of Phylogenetic Trees Solved as a Travelling Salesman Problem.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      The Annual CBRC Open House Workshop (CBRC2010) on Bioinformatics,
    • Place of Presentation
      AIST Tokyo Waterfront, Tokyo, Japan.
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 膨大な細菌ゲノム情報が可能にする代謝ネットワーク進化の俯瞰的解析2010

    • Author(s)
      岩崎渉
    • Organizer
      第83回日本細菌学会総会
    • Place of Presentation
      パシフィコ横浜,横浜
    • Year and Date
      2010-03-28
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 系統推定結果の表現と認識2010

    • Author(s)
      岩崎渉
    • Organizer
      第147回農林交流センターワークショップ
    • Place of Presentation
      農林水産省農林水産技術会議事務局筑波事務所,つくば
    • Year and Date
      2010-08-24
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Effective Multi-Scale Graph Navigation System Powered by Fast and Biologically Meaningful Hierarchical Clustering.2010

    • Author(s)
      Thanet Praneenararat, Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      3rd Asian Young Researchers Conference for Computational and Omics Biology
    • Place of Presentation
      National Cheng Kung University, Tainan, Taiwan.
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 系統推定結果の表現と認識2010

    • Author(s)
      岩崎渉
    • Organizer
      第147回農林交流センターワークショップ,
    • Place of Presentation
      農林水産省農林水産技術会議事務局筑波事務所,つくば
    • Year and Date
      2010-08-24
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Updated Phylogenetic Tree for the Era of 1000 Genomes2010

    • Author(s)
      岩崎渉, 高木利久
    • Organizer
      3rd Asian Young Researchers Conference for Computational and Omics Biology
    • Place of Presentation
      National Cheng Kung University, Tainan, Taiwan
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Interactive, Multi-Scale Navigation of Large and Complicated Biological Networks.2010

    • Author(s)
      Thanet Praneenararat, Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      The Annual CBRC Open House Workshop (CBRC2010) on Bioinformatics,
    • Place of Presentation
      AIST Tokyo Waterfront, Tokyo, Japan
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 車輪樹法:曖昧な進化系統解析結果をどう認識するか2010

    • Author(s)
      岩崎渉
    • Organizer
      日本進化学会第12回東京大会
    • Place of Presentation
      東京工業大学大岡山キャンパス,東京
    • Year and Date
      2010-08-04
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 誰もが分子進化解析をする時代のための系統関係表現2010

    • Author(s)
      岩崎渉, 高木利久
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会(BMB2010)
    • Place of Presentation
      ポートアイランド,神戸
    • Year and Date
      2010-12-07
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 車輪樹法:系統樹を超えて2010

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会第2回研究会
    • Place of Presentation
      国立遺伝学研究所,三島
    • Year and Date
      2010-10-10
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Wheel Tree : Overlooked Information in Phylogenetic Analysis.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi.
    • Organizer
      The 2010 Annual Conference of the Japanese Society for Bioinformatics
    • Place of Presentation
      Kyushu University School of Medicine, Fukuoka
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Interactive, Multi-Scale Navigation of Large and Complicated Biological Networks.2010

    • Author(s)
      Thanet Praneenararat, Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      The Annual CBRC Open House Workshop (CBRC2010) on Bioinformatics
    • Place of Presentation
      産総研臨海副都心センター,東京
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 誰もが分子進化解析をする時代のための系統関係表現2010

    • Author(s)
      岩崎渉,高木利久
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会 合同大会(BMB2010)
    • Place of Presentation
      ポートアイランド,神戸
    • Year and Date
      2010-12-07
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 生命科学研究者のための統合文献情報管理システム/研究者の論文フォルダには何が埋もれているか2010

    • Author(s)
      岩崎渉, 山本泰智, 高木利久
    • Organizer
      第43回 人工知能学会 分子生物情報研究会(SIG-MBI)/第13回オープンバイオ研究会
    • Place of Presentation
      北陸先端科学技術大学院大学,能美
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 車輸樹法:系統樹を超えて2010

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会第2回研究会
    • Place of Presentation
      国立遺伝学研究所,三島
    • Year and Date
      2010-10-10
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Interactive, Multi-Scale Navigation of Large and Complicated Biological Networks.2010

    • Author(s)
      Thanet Praneenararat, Toshihisa Takagi, Wataru Iwasaki
    • Organizer
      生命情報科学若手の会第2回研究会
    • Place of Presentation
      国立遺伝学研究所,三島
    • Year and Date
      2010-10-10
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 生命科学研究者のための統合文献情報管理システム/研究者の論文フォルダには何が埋もれているか.2010

    • Author(s)
      岩崎渉,山本泰智,高木利久
    • Organizer
      第43回人工知能学会 分子生物情報研究会(SIG-MBI)/第13回オープンバイオ研究会
    • Place of Presentation
      北陸先端科学技術大学院大学,能美
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Wheel Tree : Overlooked Information in Phylogenetic Analysis.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      The 2010 Annual Conference of the Japanese Society for Bioinformatics
    • Place of Presentation
      Kyushu University School of Medicine, Fukuoka, Japan
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] A Travelling Salesman Approach to Phylogenetic Trees.2010

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      4th Asian Young Researchers Conference on Computational and Omics Biology (AYRCOB), Biopolis, Singapore
    • Place of Presentation
      Singapore.
    • Year and Date
      2010-12-02
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 生命科学研究者のための統合文献情報管理システム2009

    • Author(s)
      岩崎渉,山本泰智,高木利久
    • Organizer
      第32回日本分子生物学会
    • Place of Presentation
      パシフィコ横浜,横浜
    • Year and Date
      2009-12-10
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 生命科学研究者のための統合文献情報管理システム2009

    • Author(s)
      岩崎渉, 山本泰智, 高木利久
    • Organizer
      第32回日本分子生物学会
    • Place of Presentation
      パシフィコ横浜, 横浜
    • Year and Date
      2009-12-10
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Effective Multi-Scale Graph Navigation System Powered by Fast and Biologically Meaningful Hierarchical Clustering2009

    • Author(s)
      Thanet Prancenararat, 岩崎渉, 高木利久
    • Organizer
      The 20th International Conference on Genome Informatics
    • Place of Presentation
      Pacifico Yokohama, Yokohama, Japan
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 生命科学研究者のための統合文献情報管理システム2009

    • Author(s)
      岩崎渉
    • Organizer
      第32回日本分子生物学会
    • Place of Presentation
      パシフィコ横浜(神奈川)
    • Year and Date
      2009-12-10
    • Data Source
      KAKENHI-PROJECT-17017002
  • [Presentation] Large-scale genome evolution analysis across the tree of life.2009

    • Author(s)
      Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      Global COE Workshop on Bioinformatics in the Era of Genome Information Big Bang
    • Place of Presentation
      BGI-Shenzhen, Shenzhen, China.
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 生命科学研究者のための統合文献情報管理システム2009

    • Author(s)
      岩崎渉
    • Organizer
      第32回日本分子生物学会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-10
    • Data Source
      KAKENHI-PROJECT-17017002
  • [Presentation] Large-scale genome evolution analysis across the tree of life2009

    • Author(s)
      岩崎渉, 高木利久
    • Organizer
      Global COE Workshop on Bioinformatics in the Era of Genome Information Big Bang
    • Place of Presentation
      BGI-Shenzhen, Shenzhen, China
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Effective Multi-Scale Graph Navigation System Powered by Fast and Biologically Meaningful Hierarchical Clustering.2009

    • Author(s)
      Thanet Praneenararat, Wataru Iwasaki, Toshihisa Takagi
    • Organizer
      The 20th International Conference on Genome Informatics
    • Place of Presentation
      Pacifico Yokohama, Yokohama, Japan
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] 複数遺伝子を必要とするシステムの獲得はどのようにして可能になったのか2009

    • Author(s)
      岩崎渉
    • Organizer
      情報生命科学若手の会第1回研究会
    • Place of Presentation
      国立遺伝学研究所,三島
    • Year and Date
      2009-04-25
    • Data Source
      KAKENHI-PROJECT-21810005
  • [Presentation] Maximum likelihood estimation of ancestral gene content over the universal tree of life2007

    • Author(s)
      Iwasaki, W. (Takagi, T.)
    • Organizer
      PSB2007
    • Place of Presentation
      Hawaii
    • Year and Date
      2007-01-05
    • Data Source
      KAKENHI-PROJECT-17017002
  • [Presentation] Reconstruction of highly heterogeneous gene-content evolution across the three domains of life2007

    • Author(s)
      Iwasaki, W.
    • Organizer
      ISMB/ECCB2007
    • Place of Presentation
      Wien
    • Year and Date
      2007-07-24
    • Data Source
      KAKENHI-PROJECT-17017002
  • [Presentation] 大規模ゲノム比較によるゲノム進化解析法の開発2007

    • Author(s)
      岩崎 渉(高木利久)
    • Organizer
      日本進化学会第9回大会
    • Place of Presentation
      京都
    • Year and Date
      2007-08-31
    • Data Source
      KAKENHI-PROJECT-17017002
  • [Presentation] 微生物ゲノム・メタゲノム、ChIP-Seq

    • Author(s)
      岩崎渉
    • Organizer
      次世代シーケンサー研究推進のためのデータ解析ワークショップ(NGSワークショップ)
    • Place of Presentation
      つくば国際会議場,茨城
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 遺伝子の旅と地球の変動

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会 第4回研究会
    • Place of Presentation
      岡崎コンファレンスセンター(岡崎)
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] この青い惑星で微生物はどのように進化してきたのか?

    • Author(s)
      岩崎渉
    • Organizer
      第16回 微研部員会主催セミナー
    • Place of Presentation
      大阪大学微生物病研究所(大阪)
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Bioinformatics for eco-systems biology

    • Author(s)
      Wataru Iwasaki
    • Organizer
      The 28th Annual meeting of the Japanese Society of Microbial Ecology
    • Place of Presentation
      豊橋技術科学大学(豊橋)
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] メタゲノムデータの比較をab initioに行う手法の開発

    • Author(s)
      尾崎遼,岩崎渉,高木利久
    • Organizer
      第7回日本ゲノム微生物学会年会
    • Place of Presentation
      長浜バイオ大学(長浜)
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] バイオイメージインフォマティクスから探る魚類の社会性行動

    • Author(s)
      福永津嵩,岩崎渉
    • Organizer
      生命情報科学若手の会第5回研究会
    • Place of Presentation
      東京大学検見川セミナーハウス,千葉
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Integration of interactive, multi-scale network navigation approach with Cytoscape for functional genomics in the big data era

    • Author(s)
      Thanet Praneenararat, Toshihisa Takagi, and Wataru Iwasaki
    • Organizer
      11th International Conference on Bioinformatics
    • Place of Presentation
      Bangkok, Thailand
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 系統推定結果の表現と認識

    • Author(s)
      岩崎渉
    • Organizer
      第176回農林交流センターワークショップ
    • Place of Presentation
      農林水産省農林水産技術会議事務局筑波事務所,茨城
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 微生物生態系インフォマティクスの世界観

    • Author(s)
      岩崎渉
    • Organizer
      NGiME (Next Generation in Microbial Ecology) 勉強会
    • Place of Presentation
      愛媛大学,愛媛
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] How can bioinformatics open up new fields in marine microbiology?

    • Author(s)
      Wataru Iwasaki
    • Organizer
      CREST International Workshop on Aquatic Microbial Ecology
    • Place of Presentation
      東京大学大気海洋研究所(柏)
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 微生物の津波土壌への適応および進化

    • Author(s)
      平岡聡史,町山麻子,岩崎渉
    • Organizer
      第8回日本ゲノム微生物学会年会
    • Place of Presentation
      東京農業大学世田谷キャンパス,東京
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 鹿児島大学鹿児島湾海底堆積物中に生息するメタンを基盤とする新規中温性微生物群の生理学的・遺伝学的特徴の解明

    • Author(s)
      竹内美緒・丸茂克美・前田広人・根建宗具・大島健志朗・片山泰樹・山岸昂夫・岩崎渉・鎌形洋一・花田智・玉木秀幸・服部正平・諏訪裕一・坂田将
    • Organizer
      第29回日本微生物生態学会
    • Place of Presentation
      鹿児島大学
    • Data Source
      KAKENHI-PROJECT-25450265
  • [Presentation] What underlies repeated gains and losses of osmoregulatory abilities in teleost fishes?

    • Author(s)
      尾崎遼,Marty Wong,竹井祥郎,岩崎渉
    • Organizer
      生命情報科学若手の会第5回研究会
    • Place of Presentation
      東京大学検見川セミナーハウス,千葉
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 生命科学データの表現と解釈

    • Author(s)
      岩崎渉
    • Organizer
      産業技術総合研究所生命情報工学研究センターHPCIセミナー
    • Place of Presentation
      産業技術総合研究所生命情報工学研究センター(東京)
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] バイオインフォマティクスの利用と考え方

    • Author(s)
      岩崎渉
    • Organizer
      東京大学大気海洋研究所共同利用研究集会
    • Place of Presentation
      東京大学大気海洋研究所,千葉
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 生命の振る舞いと成り立ちに迫るためのバイオインフォマティクス

    • Author(s)
      岩崎渉
    • Organizer
      生命情報科学若手の会第5回研究会
    • Place of Presentation
      東京大学検見川セミナーハウス,千葉
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 時計タンパク質CLOCKのChIP-Seq解析と概日性トランスクリプトーム解析

    • Author(s)
      吉種光,尾崎遼,寺嶋秀騎,ゴク・ヒエンズ,岩崎渉,鈴木穣,深田吉孝
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      マリンメッセ福岡(福岡)
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] バイオインフォマティクスからの系統樹可視化

    • Author(s)
      岩崎渉
    • Organizer
      日本生物地理学会第68回年次大会
    • Place of Presentation
      立教大学,東京
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 時計タンパク質CLOCKのChIP-Seq解析と概日性トランスクリプトーム解析

    • Author(s)
      吉種光,尾崎遼,寺嶋秀騎,ゴク・ヒエンズ,岩崎渉,鈴木穣,深田吉孝
    • Organizer
      第85回日本生化学会大会
    • Place of Presentation
      マリンメッセ福岡(福岡)
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] MitoAnnotator: An accurate and automatic mitochondrial genome annotation pipeline

    • Author(s)
      Tsukasa Fukunaga and Wataru Iwasaki
    • Organizer
      7th Asian Young Researchers Conference on Computational and Omics Biology (AYRCOB)
    • Place of Presentation
      産業総合技術研究所臨海副都心センター,東京
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 次世代DNAシーケンサデータ解析分野のバイオインフォマティクス人材の見つけ方

    • Author(s)
      岩崎渉
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド,兵庫
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] Novel marine moderately thermophilic microbes isolated from microbial consortium depends on methane

    • Author(s)
      Mio Takeuchi,Katsumi Marumo, Hiroto Maeda,Munetomo Nedachi,Kenshiro Oshima,Taiki Katayama,Takao Yamagishi,Wataru Iwasaki,Yoichi Kamagata,Satoshi Hanada,Hideyuki Tamaki,Masahira Hattori,Yuichi Suwa,Susumu Sakata
    • Organizer
      The 5th Taiwan-Korea-Japan International Symposium on Microbial Ecology
    • Place of Presentation
      National Central University, Jhongli,Taiwan
    • Data Source
      KAKENHI-PROJECT-25450265
  • [Presentation] 微生物の津波土壌への適応および進化

    • Author(s)
      平岡聡史,町山麻子,岩崎渉
    • Organizer
      生命情報科学若手の会第5回研究会
    • Place of Presentation
      東京大学検見川セミナーハウス,千葉
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] この広い地球とバイオインフォマティクス

    • Author(s)
      岩崎渉
    • Organizer
      生命医薬情報学連合大会シンポジウム
    • Place of Presentation
      タワーホール船堀(東京)
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] ゲノムインフォマティクスは系統分類学にパラダイムシフトを引き起こすか?

    • Author(s)
      岩崎渉
    • Organizer
      第32回日本微生物系統分類研究会年次大会
    • Place of Presentation
      産業技術総合研究所 つくばセンター(つくば)
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 大規模比較ゲノム解析が明らかにするプロテオロドプシンを持つ海洋細菌のゲノム進化

    • Author(s)
      熊谷洋平,吉澤晋,木暮一啓,岩崎渉
    • Organizer
      生命情報科学若手の会第5回研究会
    • Place of Presentation
      東京大学検見川セミナーハウス,千葉
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 系統推定結果の表現と認識

    • Author(s)
      岩崎渉
    • Organizer
      第166回農林交流センターワークショップ
    • Place of Presentation
      農林水産省農林水産技術会議事務局筑波事務所(つくば)
    • Invited
    • Data Source
      KAKENHI-PROJECT-23710231
  • [Presentation] 大規模比較ゲノム解析が明らかにするプロテオロドプシンを持つ海洋細菌のゲノム進化

    • Author(s)
      熊谷洋平,吉澤晋,木暮一啓,岩崎渉
    • Organizer
      第8回日本ゲノム微生物学会年会
    • Place of Presentation
      東京農業大学世田谷キャンパス,東京
    • Data Source
      KAKENHI-PROJECT-23710231
  • 1.  ITOH Takehiko (90501106)
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  • 2.  TAKAGI Toshihisa (30110836)
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  • 4.  SUZUKI Yutaka (40323646)
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  • 5.  HAYASHI Tetsuya (10173014)
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  • 6.  KUROKAWA Ken (20343246)
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  • 43.  YADA Tetsushi (10322728)
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  • 45.  OHASHI Jun (80301141)
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  • 46.  MATSUOKA Satoshi (20221583)
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  • 84.  KAI Masahiro (80260777)
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  • 85.  杢 雅利 (30416466)
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  • 86.  横川 太一 (00402751)
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  • 87.  木暮 一啓 (10161895)
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  • 88.  福田 秀樹 (30451892)
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  • 89.  小川 浩史 (50260518)
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  • 92.  西村 祐貴 (20783012)
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  • 93.  波江野 洋 (70706754)
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  • 113.  YOSHIKAWA Hiroshi
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  • 114.  YOSHIDA Mitsuaki
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  • 115.  INOKO Hidetoshi
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  • 116.  TODA Tatsushi
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  • 117.  INAZAWA Johji
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  • 118.  GOJOBORI Takashi
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  • 119.  URUSHIHARA Hideko
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  • 120.  TAKEDA Hiroyuki
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  • 121.  SHIROISHI Toshihiko
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  • 122.  ITOH Takashi
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  • 123.  SATOH Noriyuki
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  • 124.  MATSUDA Hideo
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  • 125.  GOTO Susumu
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  • 126.  TSUDA Masataka
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  • 127.  CHEN ERIC
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  • 128.  SUGANUMA Norio
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  • 129.  TAKESHIMA Hirohiko
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  • 130.  OMORI Yoshihiro
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  • 131.  NAKAGAWA Tomomi
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  • 132.  大坪 嘉行
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  • 133.  奥崎 大介
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  • 134.  谷口 浩二
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  • 135.  吉住 朋晴
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  • 136.  伊藤 心二
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  • 137.  岩崎 由香
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  • 138.  小野 竜一
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  • 139.  黄 國成
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  • 140.  McGlynn Shawn・E.
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  • 141.  美世 一守
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  • 142.  杉田 亮平
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  • 143.  水谷 紗弥佳
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  • 144.  七野 悠一
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  • 145.  塩見 美喜子
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  • 146.  伊藤 元巳
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  • 147.  重藤 真介
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  • 148.  福永 津嵩
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  • 149.  西田 睦
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  • 150.  深田 吉孝
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    # of Collaborated Products: 1 results
  • 151.  和田 浩則
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    # of Collaborated Products: 1 results
  • 152.  保坂 俊彰
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    # of Collaborated Products: 1 results
  • 153.  本田 浩章
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 154.  岩崎 正幸
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 155.  田中 真仁
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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