Takagi Toshihisa 高木利久

… Alternative Names

高木利久

TAKAGI Toshihisa 高木利久

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Researcher Number	30110836
Other IDs
External Links
Affiliation (Current)	2024: 富山国際大学, その他部局等, 教授
Affiliation (based on the past Project Information) *help	2021: 富山国際大学, 学長 2018: 東京大学, 大学院理学系研究科, 教授 2015: 東京大学, 大学院理学系研究科, 教授 2007 – 2009: The University of Tokyo, 大学院・新領域創成科学研究科, 教授 2003 – 2006: 東京大学, 大学院新領域創成科学研究科, 教授 … More 2003 – 2005: 東京大学, 大学院・新領域創成科学研究科, 教授 1994 – 2002: 東京大学, 医科学研究所, 教授 1992 – 1993: 東京大学, 医科学研究所, 助教授 1988 – 1991: Kyushu University, Associate Professor, 情報処理教育センター, 助教授 1986 – 1987: Kyushu University, 工学部, 助手 Less
Review Section/Research Field	Principal Investigator Biological Sciences Except Principal Investigator Informatics / Biological Sciences / Molecular biology / 情報システム学(含情報図書館学)
Keywords	Principal Investigator テキストからの情報抽出 / バイオインフォマティクス / information extraction from literature / 知識発見 / 自然言語処理 / パスウェイデータベース / オントロジー / ゲノムオントロジー / 表現型解析 / 遺伝子ネットワーク … More / ゲノムデータベース / CADシステム / 接続関係 / マジックセット法 / 再帰質問処理 / 演繹デ-タベ-ス / pathway databases / gene dictionary / tagged corpus / natural language processing / signal transduction / genome databases / ontology / キナーゼデータベース / 遺伝子辞書 / タグ付きコーパス / シグナル伝達系 / protein interaction analyses / gene networks / structural genomics / data mining from genome databases / genome ontology / bioinformatics / genome information science / タンパク質立体構造予測 / タンパク質相互作用解析 / 構造ゲノム科学 / ゲノムデータベースからの知識発見 / ゲノム情報科学 / 植物ゲノム解析 / 発現解析 / 配列解析 / ゲノムリシーケンス / 疾患関連遺伝子解析 / ゲノムアノテーション / 病原微生物解析 / ゲノムリシーケンス / データベース / 情報解析 / パスウエイデータベース / 文献クラスタリング / QTL解析 / 機能解析 / システム生物学 / 生命シミュレーション / ゲノム機能解析 / 生命システム / ソフトウェアオブジェクトベース / ゲノム情報処理 / 利用者インタフェース / 質問処理効率 / オブジェクト指向データベース / 演繹データベース / ル-ルの評価順序 / 複合項 / ル-ル変換 / 石油化学プラント / 設計図面 / NRSU法 / CAD … More Except Principal Investigator データベース / Database / ゲノム解析 / ネットワーク / 配列解析 / 蛋白質・核酸の構造と機能 / リシーケンシング / 次世代DNAシーケンサー / EST / Network / Genome analysis / Personal Computer / Japanese Text Processing / Textual Analysis / Writing Tools / テキスト処理 / 日本語文書処理 / 字面解析 / 推敲支援 / 自然言語理解システム / 情報検索システム / ヒト多型タイピング / 微生物 / ゲノム / データ分割 / 並列化コンパイラ / データ抽象化 / 超並列処理 / ゲノムアノテーション / メタゲノム / ゲノム多型 / ゲノムアッセンブル / スーパーコンピューター / メタゲノム解析 / 1細胞解析 / RNA-Seq / エピゲノム / 新規ゲノム配列決定 / 次世代DNAシーケンサ / インフォームドコンセント / GWAS / 個人ゲノム / de novo配列決定 / ChIP-seq / RNA-seq / Japanese Document Processing / Text Processing / ワークステーション / マンマシンインターフェース / 正規化日本語文字 / 推敲支援ツール / 日本語文章処理 / プロトタイピング / ユーザインタフェース / パーソナルコンピュータ / Software Developing Environment / Boyer-Moore Algorithm / String Matching / Normalized Japanese Text / エラーメッセージの日本語化 / Adaのパッケージ機能 / ソフトウェア開発環境 / Boyer-Mooreアルゴリズム / 文字列照合 / 正規日本語テキスト / 日本後テキスト処理 / Outreach / Resources / Genome Sequencing / 医科学倫理問題 / SNPs / マイクロサテライト / 多型タイピング / ESTシーケンシング / 産学連携 / アウトリーチ活動 / 発生進化 / 霊長類ゲノム / 比較ゲノム / 脊椎動物進化 / 遺伝子機能 / 計算機モデル化 / モデル生物 / 社会との接点 / リソース / ゲノムシーケンシング / Genetic diseases / Pathway / Molecular interactions / Protein structure prediction / Gene function prediction / 遺伝子疾患 / パスウェイ / 分子間相互作用 / タンパク質立体構造予測 / 遺伝子機能予測 / Distributed Processing / Cooperative Processing / Computer Network / Environment Integration / Media Integration / Information Base / Multimedia / マルチメデア / 分散処理 / 協調処理 / コンピュータネットワーク / 環境統合 / メディア統合 / 情報ベース / マルチメディア / Yeast genome / Analysis of B.subtilis / Human genome / Genome informatics / Functional analysis / Structural analyzes / Genome research / 酵母ゲノム / 枯草菌ゲノム解析 / ヒトゲノム / ゲノム情報解析 / ゲノム機能解析 / ゲノム構造解析 / ゲノム研究 / multicast / object oriented / data partitioning / parallelizing compiler / message pool / multiprocessor operating system / advanced information processing / system software / シミュレーション / ユーザレベル・スレッド・ライブラリ / 2レベルスケジューリング / メモリ管理アーキテクチャ / マルチキャスト / オブジェクト指向 / メッセージプール / 並列オペレーティング・システム / 高度情報処理 / システム・ソフトウェア / Structure-function relationship / Sequence analysis / Deductive Object-Oriented Database / Object-Oriented Database / Genome Database / Next Generation Database / CAD Database / Deductive Database / 非正規関係 / 線形再帰 / 間接的接続関係 / ユ-ザ-インタ-フェ-ス / マジックセット法 / 再帰質問処理 / CADデ-タベ-ス / 演繹デ-タベ-ス / DNA2次構造 / ゲノム情報処理 / CADデータベース / 質問処理 / 演繹オブジェクト指向データベース / ゲノムデータ / CADデータ / オブジェクト指向データベース / 演繹データベース / 高機能データベース / Human-Computer Interface / Work Station / Portability / 利用者インタフェ-ス / ワ-クステ-ション / パ-ソナルコンピュ-タ / ソフトウェアの移植 / 英単語の用法 / KWIC / 機能語 / ホーン節推論機構 / 意味ネットワーク / 疾患遺伝子 / 進化 / 生体生命情報学 / トランスクリプトーム / DNAシーケンシング / ゲノムインフォーマティックス / 遺伝医学 / 生命倫理 / ゲノムインフォーマティック / 病原微生物 / 有用微生物 / 多型解析 / 分子遺伝学 / 社会医学 / 臨床 / 遺伝子 / 産業微生物ゲノム / 微生物ゲノム / メディカルインフォマティクス / ヒトゲノム配列再解析 / ゲノムワイド関連解析 / 疾患関連遺伝子 / アニメーション / 性能評価用シミュレータ / 段階的詳細化 / 形式的仕様 / 知識処理 / 並列処理 / ニューラルネットワーク / スケジューラ / ゲノムデータベース / 味覚センサー / 共有データ空間 / 仕様記述 / コンピュ-タネットワ-ク / 知識情報処理 / デ-タベ-ス Less

Platform for Advanced Genome Science
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2016 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources
- Research Institution
  National Institute of Genetics
Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2010 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Research Institution
  National Institute of Genetics
Reconstruction and Analysis of Life Systems Using Knowledge-Processing TechnologyPrincipal Investigator
- Principal Investigator
  
  TAKAGI Toshihisa
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Support for data analysis and sharingPrincipal Investigator
- Principal Investigator
  
  TAKAGI Toshihisa
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Systems genomics towards system-level understanding of lifePrincipal Investigator
- Principal Investigator
  
  TAKAGI Toshihisa
- Project Period (FY)
  2004 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Applied Genomics
- Principal Investigator
  
  TSUJI Shoji
- Project Period (FY)
  2004 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Comprehensive genomics towards the frontiers of biology and med
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2004 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
Genome science towards the understanding of life
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2000 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute of Genetics
Genome Information SciencePrincipal Investigator
- Principal Investigator
  
  TAKAGI Toshihisa
- Project Period (FY)
  2000 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Extraction of biomedical knowledge from literature and its systematizationPrincipal Investigator
- Principal Investigator
  
  TAKAGI Toshihisa
- Project Period (FY)
  2000 – 2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Advanced Database Systems for Integration of Media and User Environments
- Principal Investigator
  
  KANBAYASHI Yohiko
- Project Period (FY)
  1996 – 1999
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  Kyoto University
Biological Knowledge Based on Genome Information
- Principal Investigator
  
  KANEHISA Minoru
- Project Period (FY)
  1996 – 2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  KYOTO UNIVERSITY
Japan-French Joint Research on Genome
- Principal Investigator
  
  MATSUBARA Kenichi
- Project Period (FY)
  1995 – 1997
- Research Category
  
  Grant-in-Aid for international Scientific Research
- Research Field
  
  Molecular biology
- Research Institution
  International Institute for Advanced Studies
  Osaka University
Development of Integrated System Software for Parallel Environment with Flexibility
- Principal Investigator
  
  FUKUDA Akira
- Project Period (FY)
  1994 – 1995
- Research Category
  
  Grant-in-Aid for Developmental Scientific Research (B)
- Research Field
  
  情報システム学(含情報図書館学)
- Research Institution
  Nara Institute of Science and Technology
データ抽象化に基づく超並列システムの記述と処理方式に関する研究
- Principal Investigator
  
  荒木啓二郎
- Project Period (FY)
  1993
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Nara Institute of Science and Technology
CADシステムのための演繹オブジェクト指向データベースの関する研究Principal Investigator
- Principal Investigator
  
  高木利久
- Project Period (FY)
  1992
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  The University of Tokyo
データ抽象化に基づく超並列処理シテスムの記述と処理方式に関する研究
- Principal Investigator
  
  ARAKI Keijiro
- Project Period (FY)
  1992
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Kyushu University
CADシステムのための演繹オブジェクト指向デ-タベ-スに関する研究Principal Investigator
- Principal Investigator
  
  高木利久
- Project Period (FY)
  1991
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Kyushu University
ゲノム解析に伴う大量知識情報処理の研究
- Principal Investigator
  
  KANEHISA Minoru
- Project Period (FY)
  1991
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Kyoto University
ゲノム解析に伴う大量知識情報処理の研究
- Principal Investigator
  
  金久實
- Project Period (FY)
  1991 – 1995
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Kyoto University
A study on the application of a deductive database to a CAD system
- Principal Investigator
  
  USHIJIMA Kazuo
- Project Period (FY)
  1991 – 1993
- Research Category
  
  Grant-in-Aid for General Scientific Research (B)
- Research Field
  
  Informatics
- Research Institution
  KYUSHU UNIVERSITY
Large-scale knowledge information processing in genome analysis
- Principal Investigator
  
  KANEHISA Minoru
- Project Period (FY)
  1991 – 1995
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  KYOTO UNIVERSITY
CAD用ソフトウェアのための演繹型オブジェクトベ-スに関する研究Principal Investigator
- Principal Investigator
  
  高木利久
- Project Period (FY)
  1990
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Kyushu University
Study on Enhancing Functions of the System of Writing Tools for Japanese Documents, and Expanding it's Application Area
- Principal Investigator
  
  USHIJIMA Kazuo
- Project Period (FY)
  1989 – 1991
- Research Category
  
  Grant-in-Aid for Developmental Scientific Research
- Research Field
  
  Informatics
- Research Institution
  Kyushu University
高度情報検索システムのための言語情報処理に関する研究
- Principal Investigator
  
  松尾文碩
- Project Period (FY)
  1987
- Research Category
  
  Grant-in-Aid for Special Project Research
- Research Institution
  Kyushu University
高度情報検索システムのための言語情報処理に関する研究
- Principal Investigator
  
  松尾文碩
- Project Period (FY)
  1986
- Research Category
  
  Grant-in-Aid for Special Project Research
- Research Institution
  Kyushu University
Development of Writing Tools for Japanese Documents on a Personal Computer
- Principal Investigator
  
  USHIJIMA Kazuo
- Project Period (FY)
  1986 – 1988
- Research Category
  
  Grant-in-Aid for Developmental Scientific Research
- Research Field
  
  Informatics
- Research Institution
  KYUSHU UNIVERSITY
Construction of Programming Support Environment for Japanese Text Processing
- Principal Investigator
  
  USHIJIMA Kazuo
- Project Period (FY)
  1985 – 1986
- Research Category
  
  Grant-in-Aid for General Scientific Research (B)
- Research Field
  
  Informatics
- Research Institution
  Kyushu University

[Book] 医学生物学分野におけるシソーラスとテキストマイニング技術の開発(実験医学増刊号 Vol.26, No.7)2008
- Author(s)
  小池麻子(高木利久)
- Total Pages
  6
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-17017002
[Book] 医学生物学分野におけるシソーラスとテキストマイニング技術の開発(実験医学増刊号Vol.26, No.7)2008
- Author(s)
  小池麻子(高木利久)
- Total Pages
  6
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-17020001
[Book] 医学生物学分野におけるシソーラスとテキストマイニング技術の開発(実験医学増刊号)2008
- Author(s)
  小池麻子(高木利久)
- Total Pages
  6
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-17017002
[Book] 医学生物学分野におけるシソーラスとテキストマイニング技術の開発(実験医学増刊号Vol.26, No.7)2008
- Author(s)
  小池麻子(高木利久)
- Total Pages
  6
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-16063101
[Book] Genome Informatics 20052005
- Author(s)
  Edited by Takagi, T. et al.
- Total Pages
  293
- Publisher
  Universal Academy Press, Inc.
- Data Source
  KAKENHI-PROJECT-12207001
[Book] Genome Informatics 20052005
- Author(s)
  Edited by Takagi, T. et al.
- Total Pages
  293
- Publisher
  Universal Academy Press, Inc.
- Data Source
  KAKENHI-PROJECT-17017002
[Book] Genome Informatics 2005.2005
- Author(s)
  Edited by Takagi, T.et al.
- Total Pages
  293
- Publisher
  UNIVERSAL ACADEMY PRESS, INC
- Data Source
  KAKENHI-PROJECT-16063101
[Book] Genome Informatics 20052005
- Author(s)
  Edited by Takagi, T. et al.
- Total Pages
  293
- Publisher
  Universal Academy Press, Inc.
- Data Source
  KAKENHI-PROJECT-17020001
[Book] Computational molecular biology: an introduction2004
- Author(s)
  Peter Clote (Takagi, T., Translation Supervisor)
- Total Pages
  272
- Publisher
  Kyoritsu Shuppan
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] 統計物理化学かち学ぶバイオインフオマティクス2004
- Author(s)
  Peter Clote, (高木利久監訳)
- Total Pages
  272
- Publisher
  共立出版
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] Bioinformatics Lectures in University of Tokyo2004
- Author(s)
  Takagi, T. (Ed.)
- Total Pages
  140
- Publisher
  Yodosha
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] 東京大学バイオインフォマティクス集中講義2004
- Author(s)
  監修高木利久
- Total Pages
  140
- Publisher
  羊土社
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] 東京大学バイオインフォマティクス集中講義2004
- Author(s)
  監修高木利久
- Total Pages
  140
- Publisher
  羊土社
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Book] 東京大学バイオインフォマティクス集中講義2004
- Author(s)
  高木利久(監修)
- Total Pages
  141
- Publisher
  株式会社羊土社
- Data Source
  KAKENHI-PROJECT-16063101
[Book] 東京大学バイオインフォマティクス集中講義2004
- Author(s)
  高木利久監修
- Total Pages
  140
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-12207001
[Book] 統計物理化学から学ぶバイオインフォマティクス2004
- Author(s)
  Peter Clote, (高木利久監訳)
- Total Pages
  272
- Publisher
  共立出版
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Book] 統計物理化学から学ぶバイオインフォマティクス2004
- Author(s)
  Peter Clote (高木利久監訳)
- Total Pages
  272
- Publisher
  共立出版
- Data Source
  KAKENHI-PROJECT-12208001
[Book] Series of applied life sciences (9) Bioinformatics2004
- Author(s)
  Mitaku, S., Sakaki, Y.(Ed.) (Takagi, T.Translation Supervisor)
- Total Pages
  140
- Publisher
  Tokyo Kagaku Dojin
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] 応用生命科学シリーズ(9)バイオインフォマティクス2003
- Author(s)
  美宅成樹, 榊佳之編, (高木利久)
- Total Pages
  195
- Publisher
  東京化学同人
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] 応用生命科学シリーズ(9)バイオインフォマティクス2003
- Author(s)
  美宅成樹, 榊佳之編, (高木利久)
- Total Pages
  195
- Publisher
  東京化学同人
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Book] これからのバイオインフォティクスのためのバイオ実験入門2002
- Author(s)
  高木利久監修
- Total Pages
  215
- Publisher
  羊土社
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] Introduction of Biological Experiment for Bioinformatics2002
- Author(s)
  Takagi, T. (Ed.)
- Total Pages
  215
- Publisher
  Yodosha
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] これからのバイオインフォマティクスのためのバイオ実験入門2002
- Author(s)
  高木利久監修
- Total Pages
  215
- Publisher
  羊土社
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Book] ゲノム情報生物学2000
- Author(s)
  高木利久(編集)
- Total Pages
  210
- Publisher
  中山書店
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Book] ゲノム情報生物学2000
- Author(s)
  高木利久(編集)
- Total Pages
  210
- Publisher
  中山書店
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Book] Genome Information Biology2000
- Author(s)
  Takagi, T. (Ed.)
- Total Pages
  210
- Publisher
  Nakayama Shoten
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Simultaneous mutations in SMN1 and SUMM2 fully suppress the dwarf and autoimmune phenotypes of Arabidopsis mpk4 mutant2022
- Author(s)
  Takagi Momoko、Nagai Suzuna、Kaminaka Hironori、Akimitsu Kazuya、Shirasu Ken、Ichimura Kazuya
- Journal Title
  
  Plant Signaling & Behavior
  
  Volume: 17 Issue: 1 Pages: 2046412-2046412
- DOI
  10.1080/15592324.2022.2046412
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06054, KAKENHI-PROJECT-16H06279
[Journal Article] Divalent metal transporter-related protein restricts animals to marine habitats2021
- Author(s)
  Sassa Mieko、Takagi Toshiyuki、Kinjo Azusa、Yoshioka Yuki、Zayasu Yuna、Shinzato Chuya、Kanda Shinji、Murakami-Sugihara Naoko、Shirai Kotaro、Inoue Koji
- Journal Title
  
  Communications Biology
  
  Volume: 4 Issue: 1 Pages: 1-9
- DOI
  10.1038/s42003-021-01984-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21343, KAKENHI-PROJECT-16H06279
[Journal Article] Arabidopsis SMN2/HEN2, Encoding DEAD-Box RNA Helicase, Governs Proper Expression of the Resistance Gene SMN1/RPS6 and Is Involved in Dwarf, Autoimmune Phenotypes of mekk1 and mpk4 Mutants2020
- Author(s)
  Takagi Momoko、Iwamoto Naoki、Kubo Yuta、Morimoto Takayuki、Takagi Hiroki、Takahashi Fuminori、Nishiuchi Takumi、Tanaka Keisuke、Taji Teruaki、Kaminaka Hironori、Shinozaki Kazuo、Akimitsu Kazuya、Terauchi Ryohei、Shirasu Ken、Ichimura Kazuya
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: 61 Issue: 8 Pages: 1507-1516
- DOI
  10.1093/pcp/pcaa071
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06054, KAKENHI-PROJECT-19H03255, KAKENHI-PROJECT-16H06279
[Journal Article] The CENP-A centromere targeting domain facilitates H4K20 monomethylation in the nucleosome by structural polymorphism.2019
- Author(s)
  Arimura Y, Tachiwana H, Takagi H, Hori T, Kimura H, Fukagawa T, Kurumizaka H
- Journal Title
  
  Nature Commun.
  
  Volume: 10 Issue: 1 Pages: 576-576
- DOI
  10.1038/s41467-019-08314-x
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-15H05972, KAKENHI-PLANNED-18H05534, KAKENHI-PROJECT-17H06167, KAKENHI-PROJECT-17H01408, KAKENHI-PROJECT-17H05013, KAKENHI-PROJECT-16K14785, KAKENHI-PROJECT-17K15043, KAKENHI-PROJECT-16H06279, KAKENHI-PLANNED-18H05527, KAKENHI-PROJECT-17K07501
[Journal Article] Surface microstructures are associated with mutational intratumoral heterogeneity in colorectal tumors2018
- Author(s)
  Harada T、Yamamoto E、Yamano HO、Aoki H、Matsushita HO、Yoshikawa K、Takagi R、Harada E、Tanaka Y、Yoshida Y、Eizuka M、Yorozu A、Sudo G、Kitajima H、Niinuma T、Kai M、Sasaki Y、Tokino Takashi、Sugai T、Nakase H、Suzuki H
- Journal Title
  
  Journal of Gastroenterology
  
  Volume: 53 Issue: 12 Pages: 1241-1252
- DOI
  10.1007/s00535-018-1481-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K07122, KAKENHI-PROJECT-17K08700, KAKENHI-PROJECT-17K09354, KAKENHI-PROJECT-17K09387, KAKENHI-PROJECT-18K07949, KAKENHI-PROJECT-18K15220, KAKENHI-PROJECT-17K15956, KAKENHI-PROJECT-16H06279
[Journal Article] Epigenetic silencing of SMOC1 in traditional serrated adenoma and colorectal cancer.2017
- Author(s)
  Aoki H, Yamamoto E, Takasawa A, Niinuma T, Yamano HO, Harada T, Matsushita HO, Yoshikawa K, Takagi R, Harada E, Tanaka Y, Yoshida Y, Aoyama T, Eizuka M, Yorozu A, Kitajima H, Kai M, Sawada N, Sugai T, Nakase H, Suzuki H.
- Journal Title
  
  Oncotarget.
  
  Volume: 9 Issue: 4 Pages: 4707-4721
- DOI
  10.18632/oncotarget.23523
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K08700, KAKENHI-PROJECT-17K09387, KAKENHI-PROJECT-17K15956, KAKENHI-PROJECT-15H04299, KAKENHI-PROJECT-16K19352, KAKENHI-PROJECT-16K21250, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-15K08973
[Journal Article] DNA data bank of Japan (DDBJ) progress report.2015
- Author(s)
  Mashima J, Kodama Y, Kosuge T, Fujisawa T, Katayama T, Nagasaki H, Okuda Y, Kaminuma E, Ogasawara O, Okubo K, Nakamura Y, Takagi T.
- Journal Title
  
  Nucleic Acids Res.
  
  Volume: gkv1105 Issue: D1 Pages: D51-D57
- DOI
  10.1093/nar/gkv1105
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] The TIF1β-HP1 System Maintains Transcriptional Integrity of Hematopoietic Stem Cells.2014
- Author(s)
  Miyagi S, Koide S, Saraya A, Wendt GR, Oshima M, Konuma T, Yamazaki S, Mochizuki-Kashio M, Nakajima-Takagi Y, Wang C, Chiba T, Kitabayashi I, Nakauchi H, Iwama A.
- Journal Title
  
  Stem Cell Reports.
  
  Volume: 2 Issue: 2 Pages: 145-52
- DOI
  10.1016/j.stemcr.2013.12.008
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-23106004, KAKENHI-PROJECT-23689039, KAKENHI-PROJECT-24249054, KAKENHI-PROJECT-24249056, KAKENHI-PROJECT-25893049, KAKENHI-PROJECT-221S0002
[Journal Article] CLOCK-controlled polyphonic regulations of circadian rhythms through canonical and non-canonical E-boxes.2014
- Author(s)
  Hikari Yoshitane, Haruka Ozaki, Hideki Terajima, Ngoc-Hien Du, Yutaka Suzuki, Taihei Fujimori, Naoki Kosaka, Shigeki Shimba, Sumio Sugano, Toshihisa Takagi, Wataru Iwasaki, and Yoshitaka Fukada.
- Journal Title
  
  Molecular and Cellular Biology
  
  Volume: 34 Issue: 10 Pages: 1776-1787
- DOI
  10.1128/mcb.01465-13
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23710231, KAKENHI-PROJECT-25440041, KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-24227001
[Journal Article] DDBJ Read Annotation Pipeline: a cloud computing-based pipeline for high-throughput analysis of new-generation sequencing data.2013
- Author(s)
  Nagasaki, H., Mochizuki, T., Kodama, Y., Saruhashi, S., Morizaki, S., Sugawara, H., Ohyanagi, H., Kurata, N., Okubo, K., Takagi, T., Kaminuma, E., Nakamura, Y.
- Journal Title
  
  DNA Research
  
  Volume: 20 Issue: 4 Pages: 383-390
- DOI
  10.1093/dnares/dst017
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-25252005, KAKENHI-PROJECT-221S0002
[Journal Article] Rapid Pathway Evolution Facilitated by Horizontal Gene Transfers across Prokaryotic Lineages2009
- Author(s)
  Iwasaki, W., Takagi, T.
- Journal Title
  
  PLoS Genetics. 5(3)
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Classifying biomedical figures using combination of bag of keypoints and bag of keywords, Proc. of 2nd Int. Workshop on Intell2009
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  Inform. in Biol. and Med.
  
  Pages: 848-853
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Rapid pathway evolution facilitated by horizontal gene transfers across prokaryotic lineages2009
- Author(s)
  Iwasaki, W., Takagi, T.
- Journal Title
  
  PLoS Genetics 5(3)
  
  Pages: 1000402-1000402
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Rapid pathway evolution facilitated by horizontal gene transfers across prokaryotic lineages2009
- Author(s)
  Iwasaki, W. (Takagi, T.)
- Journal Title
  
  PLoS Genetics 5(3)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Classifying biomedical figures using combination of bag of keypoints and bag of keywords2009
- Author(s)
  Koike, A. (Takagi, T.)
- Journal Title
  
  Proc. of 2nd Int. Workshop on Intell. Inform. in Biol. and Med. (印刷中)(掲載確定)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Figure classification in biomedical literature towards figure mining2008
- Author(s)
  Ishii, N. (Takagi, T.)
- Journal Title
  
  Proc. of IEEE International Conference on Bioinformatics and Biomedicine
  
  Pages: 263-269
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Figure Classification in Biomedical Literature towards Figure Mining2008
- Author(s)
  Ishii, N., Koike, A., Yamamoto, Y., Takagi, T.
- Journal Title
  
  IEEE International Conference on Bioinformatics and Biomedicine
  
  Pages: 263-269
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] OReFiL: an online resource finder for life sciences2007
- Author(s)
  Yamamoto, Y. (Takagi, T.)
- Journal Title
  
  BMC Bioinformatics 8
  
  Pages: 287-287
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Biomedical knowledge navigation by literature clustering2007
- Author(s)
  Yamamoto, Y. (Takagi, T.)
- Journal Title
  
  Journal of Biomedical Informatics 40(2)
  
  Pages: 114-130
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes2007
- Author(s)
  Kurokawa, K., Itoh, T., Kuwahara, T., Oshima, K., Toh, H., Toyoda, A., Takami, H., Morita, H., Sharma, VK, Srivastava, TP, Taylor, TD, Noguchi, H., Mori, H., Ogura, Y., Ehrlich, DS, Itoh, K., Takagi, T., Sakaki, Y., Hayashi, T., Hattori, M.
- Journal Title
  
  DNA Res 14(4)
  
  Pages: 169-181
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes2007
- Author(s)
  Kurokawa, K. (Takagi, T.)
- Journal Title
  
  DNA Research 14(4)
  
  Pages: 169-181
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] OReFiL: an online resource finder for life sciences2007
- Author(s)
  Yamamoto, Y. (Takagi, T.)
- Journal Title
  
  BMC Bioinformatics 8
  
  Pages: 287-287
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Biomedical knowledge navigation by literature clustering2007
- Author(s)
  Yamamoto, Y. (Takagi, T.)
- Journal Title
  
  Journal of Biomedical Informatics 40(2)
  
  Pages: 114-130
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] OReFiL: an online resource finder for life sciences2007
- Author(s)
  Yamamoto, Y. (Takagi, T.)
- Journal Title
  
  BMC Bioinformatics 8
  
  Pages: 287-287
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Intrinsic promoter activities of primary DNA sequences in the human genome2007
- Author(s)
  Sakakibara, Y. (Takagi, T.)
- Journal Title
  
  DNA Research 14(2)
  
  Pages: 71-77
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] OReFiL: an online resource finder for life sciences2007
- Author(s)
  Yamamoto, Y., Takagi, T.
- Journal Title
  
  BMC Bioinformatics 8
  
  Pages: 287-287
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Knowledge discovery based on an implicit and explicit conceptual network.2007
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Journal of the American Society for Information Sciences 58(1)
  
  Pages: 51-65
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Reconstruction of Highly Heterogeneous Gene-Content Evolution across the Three Domains of Life2007
- Author(s)
  Iwasaki, W., Takagi, T.
- Journal Title
  
  Bioinformatics (ISMB/ECCB2007 proceeding issue) 23
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Knowledge discovery based on an implicit and explicit conceptual network2007
- Author(s)
  Koike, A. (Takagi, T.)
- Journal Title
  
  Journal of the American Society for Information Science and Technology 58(1)
  
  Pages: 51-65
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Knowledge discovery based on an implicit and explicit conceptual network2007
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  J. Am. Soc. Info. Sci. Tech. 58 (1)
  
  Pages: 51-65
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Biomedical knowledge navigation by literature clustering.2007
- Author(s)
  Yamamoto, Y., (Takagi, T.)
- Journal Title
  
  Journal of Biomedical Informatics 40(2)
  
  Pages: 114-130
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Reconstruction of highly heterogeneous gene-content evolution across the three domains of life2007
- Author(s)
  Iwasaki, W. (Takagi, T.)
- Journal Title
  
  Bioinformatics 23(13)
  
  Pages: 230-239
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Reconstruction of highly heterogeneous gene-content evolution across the three domains of life2007
- Author(s)
  Iwasaki, W. (Takagi, T.)
- Journal Title
  
  Bioinformatics 23(13)
  
  Pages: 230-239
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Knowledge discovery based on an implicit and explicit conceptual network2007
- Author(s)
  Koike, A. (Takagi, T.)
- Journal Title
  
  Journal of the American Society for Information Science and Technology 58(1)
  
  Pages: 51-65
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Biomedical knowledge navigation by literature clustering2007
- Author(s)
  Yamamoto, Y., (Takagi, T.)
- Journal Title
  
  Journal of Biomedical Informatices 40 (2)
  
  Pages: 114-130
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Biomedical knowledge navigation by literature clustering2007
- Author(s)
  Yamamoto, Y., Takagi, T.
- Journal Title
  
  Journal of Biomedical Informatics 40(2)
  
  Pages: 114-130
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Biomedical knowledge navigation by literature clustering2007
- Author(s)
  Yamamoto, Y. (Takagi, T.)
- Journal Title
  
  Journal of Biomedical Informatics 40(2)
  
  Pages: 114-130
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Knowledge discovery based on an implicit and explicit conceptual network2007
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  J. Am. Soc. Info. Sci. Tech. 58(1)
  
  Pages: 51-65
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Comparative metagenomics revealed commonly enriched genesets in human gut microbiomes2007
- Author(s)
  Kurokawa, K. (Takagi, T.)
- Journal Title
  
  DNA Research 14(4)
  
  Pages: 169-181
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Knowledge discovery based on an implicit and explicit conceptual network.2007
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  J. Am. Soc. Info. Sci. Tech. 58(1)
  
  Pages: 51-65
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Intrinsic promoter activities of primary DNA sequences in the human genome2007
- Author(s)
  Sakakibara, Y. (Takagi, T.)
- Journal Title
  
  DNA Research 14(2)
  
  Pages: 71-77
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Knowledge discovery based on an implicit and explicit conceptual network2007
- Author(s)
  Koike, A. (Takagi, T.)
- Journal Title
  
  Journal of the American Society for Information Science and Technology 58(1)
  
  Pages: 51-65
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Reconstruction of highly heterogeneous gene-content evolution across the three domains of life2007
- Author(s)
  Iwasaki, W. (Takagi, T.)
- Journal Title
  
  Bioinformatics 23(13)
  
  Pages: 230-239
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Reconstruction of highly heterogeneous gene-content evolution across the three domains of life2007
- Author(s)
  Iwasaki, W., Takagi, T.
- Journal Title
  
  Bioinformatics 23(13)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes2007
- Author(s)
  Kurokawa, K. (Takagi, T.)
- Journal Title
  
  DNA Research 14(4)
  
  Pages: 169-181
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] MetaGene : prokaryotic gene finding from environmental genome shotgun sequences2006
- Author(s)
  Noguchi, H., (Takagi, T.)
- Journal Title
  
  Nucleic Acids Res. 34(19)
  
  Pages: 5623-5630
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] MetaGene: prokaryotic gene finding from environmental genome shotgun sequences2006
- Author(s)
  Noguchi, H., Park, J., Takagi, T.
- Journal Title
  
  Nucleic Acids Res. 34(19)
  
  Pages: 5623-5630
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Improving the performance of an SVM-based method for predicting protein-protein interactions.2006
- Author(s)
  Dohkan, S., (Takagi, T.)
- Journal Title
  
  In Silico Biology 6
  
  Pages: 48-48
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] MetaGene : prokaryotic gene finding from environmental genome shotgun sequences.2006
- Author(s)
  Noguchi, H., (Takagi, T.)
- Journal Title
  
  Nucleic Acids Research 34(19)
  
  Pages: 5623-5630
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] MetaGene : prokaryotic gene finding from environmental genome shotgum sequences2006
- Author(s)
  Noguchi, H., (Takagi, T.)
- Journal Title
  
  Nucleic Acids Res. 34 (19)
  
  Pages: 5623-5630
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Improving the performance of an SVM-based method for predicting protein-protein interactions2006
- Author(s)
  Dohkan, S., (Takagi, T.)
- Journal Title
  
  In Silico Biol. 6
  
  Pages: 48-48
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Improving the performance of an SVM-based method for predicting protein-protein interactions2006
- Author(s)
  Dohkan, S., Koike, A., Takagi, T.
- Journal Title
  
  In Silico Biol. 6
  
  Pages: 48-48
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] MetaGene: prokaryotic gene finding from environmental genome shotgun sequences2006
- Author(s)
  Noguchi, H., Park, J., Takagi, T.
- Journal Title
  
  Nucleic Acids Res. 34(19)
  
  Pages: 5623-5630
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Automatic extraction of gene/protein biological functions from biomedical text2005
- Author(s)
  Koike, A., Niwa, Y., Takagi, T.
- Journal Title
  
  Bioinformatics 21(7)
  
  Pages: 227-1236
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16063101
[Journal Article] Automatic Extraction of Gene/protein Biological Functions from Biomedical Text2005
- Author(s)
  Koike, A., Niwa, Y., Takagi, T.
- Journal Title
  
  Bioinformatics 21
  
  Pages: 1227-1236
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Automatic extraction of gene/protein biological functions from biomedical text2005
- Author(s)
  Koike, A., Niwa, Y., Takagi, T.
- Journal Title
  
  Bioinformatics 21(7)
  
  Pages: 1227-1236
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] ALICE : An algorithm to extract abbreviations from MEDLINE2005
- Author(s)
  Ao, H., (Takagi, T.)
- Journal Title
  
  Journal of American Medical Informatics Association 12
  
  Pages: 576-586
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Automatic extraction of gene/protein biological functions from biomedical text2005
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Bioinformatics 21(7)
  
  Pages: 1227-1236
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] ALICE : An algorithm to extract abbreviations from MEDLINE2005
- Author(s)
  Ao, H., Takagi, T.
- Journal Title
  
  J.Am.Med.Inform.Assoc. 12
  
  Pages: 576-586
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Automatic extraction of gene/protein biological functions from biomedical text2005
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Bioinformatics 21(7)
  
  Pages: 1227-1236
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] ALICE : an algorithm to extract abbreviations from MEDLINE2005
- Author(s)
  Ao, H., Takagi, T.
- Journal Title
  
  Journal of American Medical Informatics Association 12
  
  Pages: 576-586
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] ALICE : An algorithm to extract abbreviations from MEDLINE2005
- Author(s)
  Ao, H., (Takagi, T.)
- Journal Title
  
  Journal of American Medical Informatics Association 12
  
  Pages: 576-586
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Automatic extraction of gene/protein biological functions from biomedical text2005
- Author(s)
  Koike, A., Niwa, Y., Takagi, T.
- Journal Title
  
  Bioinformatics 21(7)
  
  Pages: 1227-1236
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] ALICE: An Algorithm to Extract Abbreviations from MEDLINE2005
- Author(s)
  Ao, H., Takagi, T.
- Journal Title
  
  JAMIA 12(5)
  
  Pages: 576-586
- Data Source
  KAKENHI-PROJECT-17017002
[Journal Article] Gene/protein/family name recognition in biomedical literature, linking biological literature, ontologies and databases : tools for users2004
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  Workshop in conjunction with NAACL/HLT 2004
  
  Pages: 9-16
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] PRIME : automatically extracted PRotein Interactions and Molecular Information databasE2004
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  In Silico Biology 5
  
  Pages: 9-20
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Prediction of protein-protein interaction sites using support vector machines2004
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  Protein Engineering Design and Selection 17(2)
  
  Pages: 165-173
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Prediction of protein-protein interactions using support vector machines2004
- Author(s)
  Dohkan, S., Koike, A., Takagi, T.
- Journal Title
  
  In Proceedings of the Fourth IEEE Symposium on Bioinformatics and BioEngineering(BIBE2004)
  
  Pages: 576-584
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Prediction of protein-protein interactions using support vector machines2004
- Author(s)
  Dohkan, S., (Takagi, T., Koike, A.)
- Journal Title
  
  In Proceedings of the Fourth IEEE Symposium on Biolnformatics and BioEngineering (BIBE2004)
  
  Pages: 576-584
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Computational molecular biology : an introduction2004
- Author(s)
  Peter Clote(Takagi, T., Translation Supervisor)
- Journal Title
  
  Kyoritsu Shuppan
  
  Pages: 272-272
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Predicting rules on organization of cis-regulatory elements, taking the order of elements into account2004
- Author(s)
  Terai, G., Takagi, T.
- Journal Title
  
  Bioinformatics 20(7)
  
  Pages: 1119-1128
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Integrative annotation of 21,037 human genes validated by full-length cDNA clones2004
- Author(s)
  Imanishi, T., (Takagi, T.)
- Journal Title
  
  PLoS BIOLOGY 2(6)
  
  Pages: 1-20
- NAID
  120004667172
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Prediction of protein-protein interaction sites using support vector machines2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Protein Engineering Design and Selection 17(2)
  
  Pages: 165-173
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Prediction of protein-protein interaction sites using support vector machines2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Protein Engineering Design and Selection 17(2)
  
  Pages: 165-173
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] PRIME : automatically extracted PRotein Interactions and Molecular Information databasE2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  In Silico Biology 5
  
  Pages: 9-20
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Predicting rules on organization of cis-regulatory elements, taking the order of elements into account2004
- Author(s)
  Terai, G., (Takagi, T.)
- Journal Title
  
  Bioinformatics 20(7)
  
  Pages: 1119-1128
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Automatic extraction of biological functions using semi-automatically gathered biological terms, development and applications of ontology on OMICS rearch2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  The Third Workshop on Ontology and Genome
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] A pathway editor for literature-based knowledge curation2004
- Author(s)
  Fukuda, K-I., (Takagi, T.)
- Journal Title
  
  Conferences in Research and Practice in Information Technology 29
  
  Pages: 339-344
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] PRIME : automatically extracted PRotein Interactions and Molecular Information databasE2004
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  In Silico Biology 5
  
  Pages: 9-20
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Integrative annotation of 21, 037 human genes validated by full-length cDNA clones2004
- Author(s)
  Imanishi, T., Takagi, T.et al.
- Journal Title
  
  PLoS BIOLOGY 2(6)
  
  Pages: 1-20
- NAID
  120004667172
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Prediction of protein-protein interactions using support vector machines2004
- Author(s)
  Dohkan, S., (Takagi, T.)
- Journal Title
  
  In Proceedings of the Fourth IEEE Symposium on BioInformatics and BioEngineering (BIBE2004)
  
  Pages: 576-584
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Predicting rules on organization of cis-regulatory elements, taking the order of elements into account2004
- Author(s)
  Terai, G., Takagi, T.
- Journal Title
  
  Bioinformatics 20(7)
  
  Pages: 1119-1128
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Automatic extraction of biological functions using semi-automatically gathered biological terms, development and applications of ontology on OMICS rearch2004
- Author(s)
  Koike, A., Niwa, Y., Takagi, T.
- Journal Title
  
  The Third Wordshop on Ontology and Genome
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Integrative annotation of 21,037 human genes validated by full-length cDNA clones2004
- Author(s)
  Imanishi, T., Takagi, T.et al.
- Journal Title
  
  PLoS BIOLOGY 2(6)
  
  Pages: 1-20
- NAID
  120004667172
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Prediction of protein-protein interactions using support vector machines2004
- Author(s)
  Dohkan, S., Koike, A., Takagi, T.
- Journal Title
  
  In Proceedings of the Fourth IEEE Symposium on BioInformatics and BioEngineering (BIBE2004)
  
  Pages: 576-584
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] A pathway editor for literature-based knowledge curation2004
- Author(s)
  Fukuda, K-I., Takagi, T.
- Journal Title
  
  Conferences in Research and Practice in Information Technology 29
  
  Pages: 339-344
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] PRIME : automatically extracted PRotein Interactions and Molecular Information databasE2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  In Silico Biology 5
  
  Pages: 9-20
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Gene/protein/family name recognition in biomedical literature, linking biological literature, ontologies and databases : tools for users2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Workshop in Conjunction with NAACL/ HLT 2004
  
  Pages: 9-16
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] A pathway editor for literature-based knowledge curation2004
- Author(s)
  Fukuda, K-I., Takagi, T.
- Journal Title
  
  Conferences in Research and Practice in Information Technology 29
  
  Pages: 339-344
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] A pathway editor for literature-based knowledge curation2004
- Author(s)
  Fukuda, K-I., (Takagi, T.)
- Journal Title
  
  Conferences in Research and Practice in Information Technology 29
  
  Pages: 339-344
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Automatic extraction of biological functions using semi-automatically gathered biological terms, development and applications of ontology on OMICS research2004
- Author(s)
  Koike, A., Niwa, Y., Takagi, T.
- Journal Title
  
  The Third Wordshop on Ontology and Genome
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Gene/protein/family name recognition in biomedical literature, linking biological literature, ontologies and databases : tools for users2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Workshop in Conjunction with NAACL/ HLT 2004
  
  Pages: 9-16
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Bioinformatics lectures in University of Tokyo2004
- Author(s)
  Takagi, T.(Ed.)
- Journal Title
  
  Yodosha
  
  Pages: 140-140
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Automatic extraction of biological functions using semi-automatically gathered biological terms, development and applications of ontology on OMICS rearch2004
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  The Third Workshop on Ontology and Genome
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Predicting rules on organization of cis-regulatory elements, taking the order of elements into account2004
- Author(s)
  Terai, G., (Takagi, T.)
- Journal Title
  
  Bioinformatics 20(7)
  
  Pages: 1119-1128
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Gene/protein/family name recognition in biomedical literature, linking biological literature, ontologies and databases : tools for users2004
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  Workshop in conjunction with NAACL/ HLT 2004
  
  Pages: 9-16
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Prediction of protein-protein interaction sites using support vector machines2004
- Author(s)
  Koike, A., Takagi, T.
- Journal Title
  
  Protein Engineering Design and Selection 17(2)
  
  Pages: 165-173
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Integrative annotation of 21,037 human genes validated by full-length cDNA clones2004
- Author(s)
  Imanishi, T., (Takagi, T.)
- Journal Title
  
  PLoS BIOLOGY 2(6)
  
  Pages: 1-20
- NAID
  120004667172
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Melina : a web server for motif extraction from promoter regions of potentially co-regulated genes2003
- Author(s)
  Poluliakh, N., (Takagi, T.)
- Journal Title
  
  Bioinformatics 19(3)
  
  Pages: 423-424
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Kinase pathway database : an integrated protein-kinase and NLP-based protein-interaction resource2003
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Genome Research 13(6A)
  
  Pages: 1231-1243
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Melina : a web server for motif extraction from promoter regions of potentially co-regulated genes2003
- Author(s)
  Poluliakh, N., Takagi, T., Nakai, K.
- Journal Title
  
  Bioinformatics 19(3)
  
  Pages: 423-424
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] FREX : a query interface for biological processes with a hierarchical and recursive structures2003
- Author(s)
  Fukuda, K-I., (Takagi, T.)
- Journal Title
  
  In Silico Biology 4
  
  Pages: 63-79
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Kinase pathway database : an integrated protein-kinase and NLP-based protein-interaction resource2003
- Author(s)
  Koike, A., Kobayashi, Y., Takagi, T.
- Journal Title
  
  Genome Res. 13(6A)
  
  Pages: 1231-1243
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] FREX : a query interface for biological processes with a hierarchical and recursive structures2003
- Author(s)
  Fukuda, K-I., Yamagata, Y., Takagi, T.
- Journal Title
  
  In Silico Biology 4
  
  Pages: 63-79
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] DIGIT : a novel gene finding program by combining gene-finders2003
- Author(s)
  Yada, T., (Takagi, T.)
- Journal Title
  
  Proc. Pacific Sympo. on Biocomputing 8
  
  Pages: 375-387
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] DIGIT : a novel gene finding program by combining gene-finders2003
- Author(s)
  Yada, T., Totoki, Y., Takaeda, Y., Sakaki, Y., Takagi, T.
- Journal Title
  
  Proc. Pacific Sympo. on Biocomputing 03, 8
  
  Pages: 375-387
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Kinase pathway database : an integrated protein-kinase and NLP-based protein-interaction resource2003
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Genome Research 13(6A)
  
  Pages: 1231-1243
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] DIGIT : a novel gene finding program by combining gene-finders2003
- Author(s)
  Yada, T., Totoki, Y., Takaeda, Y., Sakaki, Y., Takagi, T.
- Journal Title
  
  Proc. Pacific Sympo. on Biocomputing '03 8
  
  Pages: 375-387
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] FREX : a query interface for biological processes with a hierarchical and recursive structures2003
- Author(s)
  Fukuda, K-I., (Takagi, T.)
- Journal Title
  
  In Silico Biology 4
  
  Pages: 63-79
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] FREX : a query interface for biological processes with a hierarchical and recursive structures2003
- Author(s)
  Fukuda, K-I., Yamagata, Y., Takagi, T.
- Journal Title
  
  In Silico Biology 4
  
  Pages: 63-79
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Kinase pathway database : an integrated protein-kinase and NLP-based protein-interaction resource2003
- Author(s)
  Koike, A., Kobayashi, Y., Takagi, T.
- Journal Title
  
  Genome Res. 13(6A)
  
  Pages: 1231-1243
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Melina : a web server for motif extraction from promoter regions of potentially co-regulated genes2003
- Author(s)
  Poluliakh, N., Takagi, T., Nakai, K.
- Journal Title
  
  Bioinformatics 19(3)
  
  Pages: 423-424
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] DIGIT : a novel gene finding program by combining gene-finders2003
- Author(s)
  Yada, T., (Takagi, T.)
- Journal Title
  
  Proc. Pacific Sympo. on Biocomputing 8
  
  Pages: 375-387
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Series of applied life sciences(9) Bioinformatics2003
- Author(s)
  Mitaku, S., Sakaki, Y.(Ed.)(Takagi, T.)
- Journal Title
  
  Tokyo Kagaku Dojin
  
  Pages: 195-195
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] The origin and evolution of eukaryotic protein kinases2002
- Author(s)
  Koike, A., Nakai, K., Takagi, T.
- Journal Title
  
  Genome Lett. (2)
  
  Pages: 83-104
- NAID
  130003997079
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] The origin and evolution of eukaryotic protein kinases2002
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Genome Lett. 1 (2)
  
  Pages: 83-104
- NAID
  130003997079
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] The origin and evolution of eukaryotic protein kinases2002
- Author(s)
  Koike, A., (Takagi, T.)
- Journal Title
  
  Genome Lett. 1(2)
  
  Pages: 83-104
- NAID
  130003997079
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] The origin and evolution of eukaryotic protein kinases2002
- Author(s)
  Koike, A., Nakai, K., Takagi, T.
- Journal Title
  
  Genome Lett. 1(2)
  
  Pages: 83-104
- NAID
  130003997079
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Introduction of Biological Experiment for Bioinformatics2002
- Author(s)
  Takagi, T.(Ed.)
- Journal Title
  
  Yodosha
  
  Pages: 215-215
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] JSNP : a database of common gene variations in the Japanese population2002
- Author(s)
  Hirakawa, M., Tanaka, T., Hashimoto, Y., Kuroda, M., Takagi, T., Nakamura, Y.
- Journal Title
  
  Nucleic Acids Res. 30
  
  Pages: 158-162
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] JSNP : a database of common gene variations in the Japanese population2002
- Author(s)
  Hirakawa, M., Tanaka, T., Hashimoto, Y., Kuroda, M., Takagi, T., Nakamura, Y.
- Journal Title
  
  Nucleic Acids Res. 30
  
  Pages: 158-162
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] JSNP : a database of common gene variations in the Japanese population2002
- Author(s)
  Hirakawa, M., (Takagi, T.)
- Journal Title
  
  Nucleic Acids Res. 30
  
  Pages: 158-162
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] JSNP : a database of common gene variations in the Japanese population2002
- Author(s)
  Hirakawa, M., (Takagi, T.)
- Journal Title
  
  Nucleic Acids Res. 30
  
  Pages: 158-162
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Assessment of prediction accuracy of protein function from protein-protein interaction data2001
- Author(s)
  Hishigaki, H., Nakai, K., Ono, T., Tanigami, A., Takagi, T.
- Journal Title
  
  Yeast 18(6)
  
  Pages: 523-531
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Knowledge representation of signal transduction pathways2001
- Author(s)
  Fukuda, K., (Takagi, T.)
- Journal Title
  
  Bioinformatics 17
  
  Pages: 829-837
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Automated extraction of information on protein interactions from the biological Literature2001
- Author(s)
  Ono, T., (Takagi, T.)
- Journal Title
  
  Bioinformatics 17
  
  Pages: 155-161
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Signal transduction pathways and logical inferences2001
- Author(s)
  Fukuda, K., (Takagi, T.)
- Journal Title
  
  METMBS2001
  
  Pages: 297-303
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Signal transduction pathways and logical inferences2001
- Author(s)
  Fukuda, K., (Takagi, T.)
- Journal Title
  
  METMBS2001
  
  Pages: 297-303
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Knowledge representation of signal transduction pathways2001
- Author(s)
  Fukuda, K., (Takagi, T.)
- Journal Title
  
  Bioinformatics 17
  
  Pages: 829-837
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Automated extraction of information on protein interactions from the biological Literature2001
- Author(s)
  Ono, T., Hishigaki, H., H.Tanigami, A., Takagi, T.
- Journal Title
  
  Bioinformatics 17
  
  Pages: 155-161
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Automated extraction of information on protein interactions from the biological Literature2001
- Author(s)
  Ono, T., Hishigaki, H., Tanigami, A., Takagi, T.
- Journal Title
  
  Bioinformatics 17
  
  Pages: 155-161
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Signal transduction pathways and logical inferences2001
- Author(s)
  Fukuda, K., Takagi, T.
- Journal Title
  
  METMBS2001
  
  Pages: 297-303
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Assessment of prediction accuracy of protein function from protein-protein interaction data2001
- Author(s)
  Hishigaki, H., (Takagi, T.)
- Journal Title
  
  Yeast 18(6)
  
  Pages: 523-531
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Signal transduction pathways and logical inferences2001
- Author(s)
  Fukuda, K., Takagi, T.
- Journal Title
  
  METMBS2001
  
  Pages: 297-303
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Assessment of prediction accuracy of protein function from protein-protein interaction data2001
- Author(s)
  Hishigaki, H., (Takagi, T.)
- Journal Title
  
  Yeast 18(6)
  
  Pages: 523-531
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Assessment of prediction accuracy of protein function from protein-protein interaction data2001
- Author(s)
  Hishigaki, H., Nakai, K., Ono, T., Tanigami, A., Takagi, T.
- Journal Title
  
  Yeast 18(6)
  
  Pages: 523-531
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Automated extraction of information on protein interactions from the biological Literature2001
- Author(s)
  Ono, T., (Takagi, T.)
- Journal Title
  
  Bioinformatics 17
  
  Pages: 155-161
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Knowledge representation of signal transduction pathways2001
- Author(s)
  Fukuda, K., Takagi, T.
- Journal Title
  
  Bioinformatics 17
  
  Pages: 829-837
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Knowledge representation of signal transduction pathways2001
- Author(s)
  Fukuda, K., Takagi, T.
- Journal Title
  
  Bioinformatics 17
  
  Pages: 829-837
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] PNAD-CSS : a workbench for constructing a protein name abbreviation dictionary2000
- Author(s)
  Yoshida, M., (Takagi, T.)
- Journal Title
  
  Bioinformatics 169(2)
  
  Pages: 169-175
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Genome Information Biology2000
- Author(s)
  Takagi, T. (Ed.)
- Journal Title
  
  Nakayama Shoten
  
  Pages: 210-210
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] PNAD-CSS : a workbench for constructing a protein name abbreviation dictionary2000
- Author(s)
  Yoshida, M., Fukuda, K., Takagi T.
- Journal Title
  
  Bioinformatics 169(2)
  
  Pages: 169-175
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Inferring genetic networks from DNA microarray data by multiple regression analysis2000
- Author(s)
  Kato, M., (Takagi, T.)
- Journal Title
  
  Genome Informatics Workshop 2000
  
  Pages: 118-128
- NAID
  130003996840
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Inferring genetic networks from DNA microarray data by multiple regression analysis2000
- Author(s)
  Kato, M., Tsunoda, T., Takagi, T.
- Journal Title
  
  GIW2000
  
  Pages: 118-128
- NAID
  130003996840
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Inferring genetic networks from DNA microarray data by multiple regression analysis2000
- Author(s)
  Kato, M., Tsunoda, T., Takagi, T.
- Journal Title
  
  GIW2000
  
  Pages: 118-128
- NAID
  130003996840
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Inferring genetic networks from DNA microarray data by multiple regression analysis2000
- Author(s)
  Kato, M., (Takagi, T.)
- Journal Title
  
  Genome Informatics Workshop 2000
  
  Pages: 118-128
- NAID
  130003996840
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] PNAD-CSS : a workbench for constructing a protein name abbreviation dictionary2000
- Author(s)
  Yoshida, M., Fukuda, K., Takagi T.
- Journal Title
  
  Bioinformatics 169(2)
  
  Pages: 169-175
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] PNAD-CSS : a workbench for constructing a protein name abbreviation dictionary2000
- Author(s)
  Yoshida, M., (Takagi, T., Fukuda, K.)
- Journal Title
  
  Bioinformatics 169(2)
  
  Pages: 169-175
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Journal Article] Intrinsic promoter activities of primary DNA sequences in the human genome.
- Author(s)
  Sakakibara, Y., (Takagi, T.)
- Journal Title
  
  DNA Research (印刷中)
- Data Source
  KAKENHI-PROJECT-16063101
[Patent] 文献データ検索方法及びプログラム2003
- Inventor(s)
  青裕子, 高木利久
- Industrial Property Number
  2003-184379
- Filing Date
  2003-06-27
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Patent] 略字情報抽出方法2003
- Inventor(s)
  青裕子, 高木利久
- Industrial Property Number
  2003-184378
- Filing Date
  2003-06-27
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Patent] 文献データ検索方法及びプログラム2003
- Inventor(s)
  青裕子, 高木利久
- Industrial Property Number
  2003-184379
- Filing Date
  2003-06-27
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Patent] 略字情報抽出方法2003
- Inventor(s)
  青裕子, 高木利久
- Industrial Property Number
  2003-184378
- Filing Date
  2003-06-27
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Patent] 情報抽出方法及び記録媒体2000
- Inventor(s)
  小林義行, 高木利久他
- Industrial Property Number
  2000-217036
- Filing Date
  2000-07-18
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Patent] 遺伝子ネットワーク研究支援システム及び方法2000
- Inventor(s)
  吉田美寸夫, 高木利久他
- Industrial Property Number
  2000-284612
- Filing Date
  2000-09-20
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208001
[Patent] 遺伝子ネットワーク研究支援システム及び方法2000
- Inventor(s)
  吉田美寸夫, 高木利久他
- Industrial Property Number
  2000-284612
- Filing Date
  2000-09-20
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Presentation] DEAD-box RNA ヘリカーゼをコードするシロイヌナズナSMN2/HEN2はSMN1/RPS6による病害抵抗性に必須でありmekk1及びmpk4変異体の矮性を伴う防御反応表現型に関与する2020
- Author(s)
  高木桃子、岩本直樹、久保佑太、森本貴行、高木宏樹、高橋史憲、西内巧、田中啓介、太治輝昭、上中弘典、篠崎一雄、秋光和也、寺内良平、白須賢、市村和也
- Organizer
  令和2年度日本植物病理学会関西部会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] DEAD-box RNAヘリカーゼをコードするSMN2は抵抗性遺伝子SMN1/RPS6の正常な発現に必要である2019
- Author(s)
  高木桃子, 岩本直樹, 久保佑太, 森本貴行, 萩藤孝輔, 高木宏樹, 田中啓介, 太治輝昭, 秋光和也, 寺内良平, 白須賢, 市村和也
- Organizer
  植物微生物研究会第29回研究交流会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] DEAD-box RNA ヘリカーゼをコードするシロイヌナズナSMN2/HEN2は抵抗性遺伝子SMN1/RPS6の機能に必須である2019
- Author(s)
  市村和也, 高木桃子, 岩本直樹, 久保佑太, 森本貴行, 萩藤孝輔, 高木宏樹, 高橋史憲, 篠崎一雄, 上中弘典, 田中啓介, 太治輝昭, 秋光和也, 寺内良平, 白須賢
- Organizer
  第8回植物RNAネットワークシンポジウム
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] ニガウリにおける染色体レベルの全ゲノム配列情報整備へ向けて2019
- Author(s)
  松村英生、太郎良和彦、谷合直樹、宮城徳道、高木宏樹、浦崎直也
- Organizer
  日本育種学会第135回講演会
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Characterization of SOP1 in posttranscriptional regulation of defense related gene expression.2019
- Author(s)
  Hagito, K., Iwamoto, N., Takagi, M., Takagi, H., Tanaka, K., Taji, T., Shinozaki, K., Terauchi, R., Shirasu, K. Ichimura, K.
- Organizer
  Phytogene Symposium XI
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] CLOCKによる古典的・非古典的E-boxを介した概日時計の"多声的"制御2014
- Author(s)
  Hikari Yoshitane, Haruka Ozaki, Hideki Terajima, Ngoc-Hien Du, Yutaka Suzuki, Taihei Fujimori, Naoki Kosaka, Shigeki Shimba, Sumio Sugano, Toshihisa Takagi, Wataru Iwasaki, and Yoshitaka Fukada.
- Organizer
  日本バイオインフォマティクス学会2014年年会・第3回生命医薬情報学連合大会
- Place of Presentation
  仙台国際センター（仙台）
- Year and Date
  2014-10-03
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Read Annotation Pipeline:新型シーケンサ由来配列のクラウド型パイプライン2011
- Author(s)
  長崎英樹, 望月孝子, 神沼英里, 渡邊成樹, 児玉悠一, 猿橋智, 菅原秀明, 高木利久, 大久保公策, 中村保一
- Organizer
  第52回日本植物生理学会年会
- Place of Presentation
  東北大学(宮城県仙台市)
- Year and Date
  2011-03-20
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 日本DNAデータバンク(DDBJ)での新規電算機システムによる超並列型シーケンサ由来の大規模塩基配列情報解析支援の試み2011
- Author(s)
  望月孝子, 児玉悠一, 猿橋智, 長崎英樹, 神沼英里, 菅原秀明, 大久保公策, 高木利久, 中村保一
- Organizer
  「生命情報科学若手の会」第2回研究会
- Place of Presentation
  国立遺伝学研究所(静岡県三島市)
- Year and Date
  2011-10-09
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 次世代シーケンサーのアーカイブDBとクラウド型データ解析システムの紹介2011
- Author(s)
  神沼英里、児玉悠一、猿橋智、望月孝子、長崎英樹、高木利久、大久保公策、中村保一
- Organizer
  第154回農林交流センターワークショップ「次世代シーケンサーを利用したゲノム解析の実際」
- Place of Presentation
  パシフィコ横浜(神奈川県横浜市)
- Year and Date
  2011-08-19
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 新型シーケンサ・アーカイブ配列のクラウド型解析パイプラインDDBJ Pipeline進捗:de novoアセンブル配列注釈ワークフロー2011
- Author(s)
  長崎英樹、望月孝子、児玉悠一、猿橋智、高木利久、大久保公策、神沼英里、中村保一
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜(神奈川県横浜市)
- Year and Date
  2011-12-14
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Sequence Read Archive and a cloud-computing based annotation tool for next-generation sequencing data2011
- Author(s)
  Nagasaki, H., Mochizuki, T., Kodama, Y., Saruhashi, S., Takagi, T., Okubo, K., Kaminuma, E., Nakamura, Y.
- Organizer
  The 2nd International Conference on the Progress of "1000 Plant & Animal Reference Genomes Project"
- Place of Presentation
  Shenzhen, China
- Year and Date
  2011-07-11
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Sequence Read Archive and a cloud-computing based analytical pipeline for next-generation sequencing reads2011
- Author(s)
  Satoshi Saruhashi, Takako Mochizuki, Hideki Nagasaki, Yuichi Kodama, Asami Nozaki, Kyung-Bum Lee, Toshihisa Okido, Emi Yokoyama, Eli Kaminuma, Hideaki Sugawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
- Organizer
  8th Solanaceae and 2nd Cucurbitaceae Joint Conference
- Place of Presentation
  神戸国際会議場(兵庫県神戸市)
- Year and Date
  2011-11-28
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Read Annotation Pipeline : A cloud based pipeline for high-throughput analysis of next generation sequencing data2011
- Author(s)
  Nagasaki, H., Mochizuki, T., Watanabe S., Morizaki, S., Kodama Y., Saruhashi, S., Takagi T., Okubo K., Kaminuma E., Nakamura, Y.
- Organizer
  Plant and Animal Genome XIX Conference
- Place of Presentation
  San Diego, USA
- Year and Date
  2011-01-15
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Read Annotation Pipeline : 新型シーケンサ由来配列のクラウト型解析パイプライン2011
- Author(s)
  猿橋智, 児玉悠一, 李慶範, 大城戸利久, 横山会美, 長崎英樹, 望月孝子, 神沼英里, 菅原秀明, 高木利久, 大久保公策, 中村保一
- Organizer
  NGS現場の会第1回研究会
- Place of Presentation
  熱海ニューフジヤホテル(静岡県熱海市)
- Year and Date
  2011-05-28
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 次世代シーケンサのアーカイブDBとクラウド型解析パイプライン2010
- Author(s)
  神沼英里、望月孝子、児玉悠一、猿橋智、菅原秀明、大久保公策、高木利久、中村保一
- Organizer
  第148回農林交流センターワークショップ「次世代シーケンサーを利用したゲノム解析の実際」
- Place of Presentation
  農林水産先端技術研究所(茨城県つくば市)
- Year and Date
  2010-09-10
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Sequence Read Archive and a cloud computing based analytical pipeline2010
- Author(s)
  Eli Kaminuma, Hideki Nagasaki, Takako Mochizuki, Yuichi Kodama, Satoshi Saruhashi, Hideki Nagasaki, Hideaki Sugawara, Toshihisa Takagi, Kousaku Okubo
- Organizer
  2010 NIG Collaborative Research and Research Meeting : Toward Next Generation Studies of Biodiversity and Bioresources
- Place of Presentation
  国立遺伝学研究所(静岡県三島市)
- Year and Date
  2010-11-29
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Read Annotation Pipeline : A web-based analytical tool for next-generation sequencing data2010
- Author(s)
  Eli Kaminuma, Takako Mochizuki, Yuichi Kodama, Satoshi Saruhashi, Hideaki Sugawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
- Organizer
  18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB2010)
- Place of Presentation
  Boston, USA
- Year and Date
  2010-07-11
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Read Annotation Pipeline : A cloud computing based analytical tool for next-generation sequencing data2010
- Author(s)
  Yasukazu Nakamura, Eli Kaminuma, Takako Mochizuki, Yuichi Kodama, Satoshi Saruhashi, Hideki Nagasaki, Hideaki Sugawara, Toshihisa Takagi, Kousaku Okubo
- Organizer
  Rice Annotation Project RAP7 meeting
- Place of Presentation
  東京国際交流館(東京都江東区)
- Year and Date
  2010-10-14
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 次世代シーケンサのアーカイブDBとクラウド型解析パイプライン2010
- Author(s)
  神沼英里、望月孝子、児玉悠一、猿橋智、菅原秀明、大久保公策、高木利久、中村保一
- Organizer
  NIASシンポジウム「イネ遺伝学・分子生物学ワークショップ2010」
- Place of Presentation
  つくば国際会議場(茨城県つくば市)
- Year and Date
  2010-07-02
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Sequence Read Annotation Pipeline-A cloud computing-based analytical tool for next-generation sequencing data2010
- Author(s)
  Eli Kaminuma, Takako Mochizuki, Yuichi Kodama, Satoshi Saruhashi, Hideaki Sugawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
- Organizer
  The tenth Cold Spring Harbor Laboratory/Wellcome Trust conference on Genome Informatics
- Place of Presentation
  Hinxton, UK
- Year and Date
  2010-09-15
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] DDBJ Read Annotation Pipeline:新型シーケンサ由来配列データ解析パイプライン2010
- Author(s)
  長崎英樹、望月孝子、神沼英里、渡邊成樹、児玉悠一、猿橋智、菅原秀明、高木利久、大久保公策、中村保一
- Organizer
  第33回日本分子生物学会年会
- Place of Presentation
  神戸国際会議場(兵庫県神戸市)
- Year and Date
  2010-12-07
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] 既知複合体立体構造データベースを利用したタンパク質-リガンド相互作用パターンの解析と結合様式予測手法の開発2009
- Author(s)
  笠原浩太(高木利久)
- Organizer
  日本薬学会第129年会
- Place of Presentation
  京都
- Year and Date
  2009-03-27
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] Biomedical figure search using combination of bag of keypoints and bag of words2009
- Author(s)
  Koike, A. (Takagi, T. )
- Organizer
  GIW2009
- Place of Presentation
  横浜
- Year and Date
  2009-12-15
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] Classification of neuroimaging figures toward automatic figure annotation system2009
- Author(s)
  Ishii, N. (Takagi, T. )
- Organizer
  GIW2009
- Place of Presentation
  横浜
- Year and Date
  2009-12-14
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] Effective multi-scale graph navigation system powered by fast and biologically meaningful hierarchical clustering2009
- Author(s)
  Praneenararat, T. (Takagi, T. )
- Organizer
  GIW2009
- Place of Presentation
  横浜
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] 既知タンパク質-リガンド複合体立体構造情報を利用した経験的結合様式予測手法の開発2008
- Author(s)
  笠原浩太(高木利久)
- Organizer
  日本薬学会第128年会
- Place of Presentation
  横浜
- Year and Date
  2008-03-26
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] 既知複合体立体構造の知識に基づいたタンパク質-リガンド結合様式予測手法の開発2008
- Author(s)
  笠原浩太(高木利久)
- Organizer
  第31回情報化学討論会
- Place of Presentation
  東京
- Year and Date
  2008-11-13
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] X線マイクロCT技術を用いた脳神経細胞の3次元再構築2007
- Author(s)
  水谷治央(高木利久)
- Organizer
  第30回日本神経科学学会
- Place of Presentation
  横浜
- Year and Date
  2007-09-11
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] 3D reconstruction of neuronal circuits by using synchrotron radiation X-ray micro-tomography2007
- Author(s)
  Mizutani, H. (Takagi, T.)
- Organizer
  Fall 2007 Janelia Conference: Neural Circuit Reconstruction
- Place of Presentation
  Washington
- Year and Date
  2007-09-25
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] A prototype platform for flexible comparison analyses of interactions and pathways2007
- Author(s)
  Fukagawa, H. (Takagi, T. )
- Organizer
  ISMB/ECCB2007
- Place of Presentation
  Wien
- Year and Date
  2007-07-22
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] Maximum likelihood estimation of ancestral gene content over the universal tree of life2007
- Author(s)
  Iwasaki, W. (Takagi, T.)
- Organizer
  PSB2007
- Place of Presentation
  Hawaii
- Year and Date
  2007-01-05
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] 表現型進化と遺伝子進化を結ぶ統合データベースの構築2007
- Author(s)
  星山大介(高木利久)
- Organizer
  第30回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] 表現型進化と遺伝子進化を結ぶ統合データベースの構築2007
- Author(s)
  星山大介(高木利久)
- Organizer
  日本進化学会第9回大会
- Place of Presentation
  京都
- Year and Date
  2007-09-01
- Data Source
  KAKENHI-PROJECT-17017002
[Presentation] 大規模ゲノム比較によるゲノム進化解析法の開発2007
- Author(s)
  岩崎渉(高木利久)
- Organizer
  日本進化学会第9回大会
- Place of Presentation
  京都
- Year and Date
  2007-08-31
- Data Source
  KAKENHI-PROJECT-17017002

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Takagi Toshihisa 高木 利久

高木 利久

TAKAGI Toshihisa 高木 利久

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Reconstruction and Analysis of Life Systems Using Knowledge-Processing TechnologyPrincipal Investigator

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Support for data analysis and sharingPrincipal Investigator

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Systems genomics towards system-level understanding of lifePrincipal Investigator

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Genome Information SciencePrincipal Investigator

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Extraction of biomedical knowledge from literature and its systematizationPrincipal Investigator

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Takagi Toshihisa 高木利久

高木利久

TAKAGI Toshihisa 高木利久