Morishita Shinichi 森下真一

… Alternative Names

森下真一

MORISHITA Shinichi 森下真一

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Researcher Number	90292854
Other IDs	https://orcid.org/0000-0002-6201-8885
External Links
Affiliation (Current)	2025: 東京大学, 大学院新領域創成科学研究科, 教授
Affiliation (based on the past Project Information) *help	2021 – 2024: 東京大学, 大学院新領域創成科学研究科, 教授 2018: 東京大学, 大学院新領域創成科学研究科, 教授 2015: 東京大学, 医学部, 教授 2012 – 2015: 東京大学, 新領域創成科学研究科, 教授 2014: 東京大学, 大学院新領域創成科学研究科, 教授 … More 2007 – 2011: The University of Tokyo, 大学院・新領域創成科学研究科, 教授 2004 – 2006: University of Tokyo, Professor, 大学院新領域創成科学研究科, 教授 2003 – 2005: 東京大学, 大学院・新領域創成科学研究科, 教授 1999 – 2002: 東京大学, 大学院・新領域創成科学研究科, 助教授 2000 – 2001: 東京大学, 新領域創成科学研究科, 助教授 1999: 東京大学, 大学院・新領域創成研究科, 助教授 1998: 東京大学, 医科学研究所, 客員助教授 Less
Review Section/Research Field	Principal Investigator Biological Sciences / Intelligent informatics / Genome biology / Biological Sciences Except Principal Investigator Biological Sciences / Basic Section 56010:Neurosurgery-related / Pediatrics / Neurology / Biological Sciences
Keywords	Principal Investigator ゲノム / アルゴリズム / バイオインフォマティクス / siRNA / データベース / データマイニング / ヒトゲノム / 塩基置換 / 表現型 / Image Processing of Micrographs … More / Phenome / Comparative Genomics / Transcription Start Site Analysis / Genome Sequencing / Bioinformatics / アミノ酸モチーフ / アラインメント / ゲノム情報 / オリゴマ設計 / DNAチップ / ゲノム解析ソフトウエア / ゲノム配列解読 / 遺伝子発現量解析 / RNAi / ゲノムアノテーション / 遺伝子予測 / 顕微鏡画像解析 / フェノーム / 比較ゲノム / 転写開始点 / ゲノム解読 / COMPUTATIONAL COMPLEXITY / ALGORITHM / DATABASE QUERY OPTIMIZATION / DATA MINING / 知識発見 / アソシエーションルール / メダカゲノム / 近交系 / 進化 / DNAメチル化 / 次世代シーケンサー / ソフトウエア / 疾患関連遺伝子変異 / 構造多型 / パーソナルゲノム / 異常リピート配列検出 / 構造変異 / 家系解析 / 脳疾患 / エキソーム解析 / 全ゲノム解析 / バイオインフォマテイクス / 変異体 / 画像処理 / 表現型解析 … More Except Principal Investigator バイオインフォマティクス / メタゲノム / エピゲノム / 知識発見 / 次世代シークエンサー / リシーケンシング / 次世代DNAシーケンサー / 個人ゲノム / ゲノム / ゲノムアノテーション / long read sequencing / RNF213 / もやもや病 / スーパーコンピュータ / 空間的オミックス解析 / RNA解析 / ゲノム・メタゲノム / 次世代シーケンサー / シングルセル解析 / オミックス解析 / ゲノム多型 / ゲノムアッセンブル / スーパーコンピューター / メタゲノム解析 / 1細胞解析 / RNA-Seq / 新規ゲノム配列決定 / 発現プロファイル / 急性リンパ性白血病 / エクソーム解析 / 発現アレイ / アレイCGH / 急性白血病 / ETV6遺伝子 / 胚細胞変異 / 家族性 / 白血病 / protein interaction analyses / gene networks / structural genomics / data mining from genome databases / information extraction from literature / genome ontology / bioinformatics / genome information science / タンパク質立体構造予測 / タンパク質相互作用解析 / 遺伝子ネットワーク / 構造ゲノム科学 / ゲノムデータベースからの知識発見 / テキストからの情報抽出 / ゲノムオントロジー / ゲノム情報科学 / artificial intelligence / wavelet analysis / rule discovery / statistical science / machine learning / scientific database / knowledge discovery / data mining / 人工知能 / ウェーブレット / 法則発見 / 統計科学 / 機械学習 / 科学データベース / データマイニング / 神経変性疾患 / ゲノム解析 / 連鎖解析 / 皮膚生検 / 核内封入体 / NIID / 次世代DNAシーケンサ / インフォームドコンセント / GWAS / de novo配列決定 / ChIP-seq / RNA-seq / ゲノムインフォマティクス / シーケンサー / インフォマティクス / 脳疾患 / 植物ゲノム解析 / 発現解析 / 配列解析 / ゲノムリシーケンス / 疾患関連遺伝子解析 / 病原微生物解析 / ゲノムリシーケンス / データベース / 表現型解析 / 情報解析 Less

Elucidation of genetic factors of moyamoya disease and search for therapeutic targets using long read sequencing
- Principal Investigator
  
  宮脇哲
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 56010:Neurosurgery-related
- Research Institution
  The University of Tokyo
Platform for Advanced Genome Science
- Principal Investigator
  
  黒川顕
- Project Period (FY)
  2022 – 2027
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (platforms for Advanced Technologies and Research Resources)
- Research Institution
  National Institute of Genetics
Platform for Advanced Genome Science
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2016 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources
- Research Institution
  National Institute of Genetics
Identification of causative genes in familial acute lymphoblastic leukemia
- Principal Investigator
  
  Moritake Hiroshi
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Pediatrics
- Research Institution
  University of Miyazaki
Identification of NIID causative gene with next generation sequencer
- Principal Investigator
  
  SONE Jun
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Neurology
- Research Institution
  Nagoya University
Genome evolution induced by chromatin structure and DNA methylationPrincipal Investigator
- Principal Investigator
  
  MORISHITA Shinichi
- Project Period (FY)
  2011 – 2013
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Genome biology
- Research Institution
  The University of Tokyo
elucidation of mechanisms of brain diseases based on personal genome information
- Principal Investigator
  
  TSUJI Shoji
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Exploring informatics for brain diseases based on personal genomicsPrincipal Investigator
- Principal Investigator
  
  MORISHITA Shinichi
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia
- Principal Investigator
  
  KOHARA Yuji
- Project Period (FY)
  2010 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Research Institution
  National Institute of Genetics
Technology for analyzing biological functions from phenomePrincipal Investigator
- Principal Investigator
  
  MORISHITA Shinichi
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Support for data analysis and sharing
- Principal Investigator
  
  TAKAGI Toshihisa
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Genome Information Science
- Principal Investigator
  
  TAKAGI Toshihisa
- Project Period (FY)
  2000 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Knowledge Discovery from Genome DatabasesPrincipal Investigator
- Principal Investigator
  
  MORISHITA Shinichi
- Project Period (FY)
  2000 – 2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  University of Tokyo
Knowledge Discovery in Databases
- Principal Investigator
  
  MIYANO Satoru
- Project Period (FY)
  1998 – 2000
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas (A)
- Research Institution
  The University of Tokyo
QUERY OPTIMIZATION TECHNIQUE FOR DATA MININGPrincipal Investigator
- Principal Investigator
  
  MORISHITA Shinichi
- Project Period (FY)
  1998 – 2000
- Research Category
  
  Grant-in-Aid for Scientific Research (B).
- Research Field
  
  Intelligent informatics
- Research Institution
  UNIVERSITY OF TOKYO

[Book] ゲノム医療における長鎖シーケンサー2018
- Author(s)
  森下真一
- Total Pages
  243
- Publisher
  実験医学
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] 臨床応用に向けた疾患シーケンス解析2018
- Author(s)
  森下真一
- Total Pages
  228
- Publisher
  遺伝子医学
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] 最新遺伝医学研究と遺伝カウンセリング、遺伝子医学MOOK別冊2017
- Author(s)
  森下真一
- Publisher
  メディカルドゥ
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] 東京大学ゲノム医科学研究機構監修「ゲノム医科学 -医療ビッグデータの活用とゲノム医療の実践-」2017
- Author(s)
  森下真一
- Publisher
  南山堂
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] 実験医学増刊「RNA-Seq実験ハンドブック」2016
- Author(s)
  森下真一
- Pages
  236-241
- Total Pages
  282
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] 実験医学別冊「メタゲノム解析実験ハンドブック」2016
- Author(s)
  鈴木慶彦、森下真一
- Pages
  149-155
- Total Pages
  231
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] 遺伝子医学MOOK別冊「最新精神・神経遺伝医学研究と遺伝カウンセリング」2016
- Author(s)
  森下真一
- Pages
  51-60
- Total Pages
  308
- Publisher
  株式会メディカルドゥ
- Data Source
  KAKENHI-PROJECT-16H06279
[Book] パーソナルゲノム再解読2012
- Author(s)
  森下真一
- Total Pages
  6
- Publisher
  細胞工学
- Data Source
  KAKENHI-PLANNED-22129008
[Book] 生命研究への応用と開発が進むバイオデータベースとソフトウェア最前線(『実験医学』2008年4月増刊号)2008
- Author(s)
  森下真一、阿久津達也編
- Total Pages
  225
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-17020001
[Book] 生命研究への応用と開発が進むバイオデータベースとソフトウェア最前線(『実験医学』2008年4月増刊号)2008
- Author(s)
  森下真一, 阿久津達也編
- Total Pages
  225
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-17020001
[Book] 生命研究への応用と開発が進むバイオデータベースとソフトウェア最前線2008
- Author(s)
  森下真一, 阿久津達也編
- Total Pages
  226
- Publisher
  実験医学
- Data Source
  KAKENHI-PROJECT-17017007
[Book] メダカゲノム解析に基づく脊椎動物ゲノム進化の推定(実験医学増刊号 Vo1.25, No.2)2007
- Author(s)
  中谷洋一郎, (森下真一)
- Total Pages
  6
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-17020001
[Book] Large-scale genome sequence processing2006
- Author(s)
  Kasahara, M., (Morishita, S.)
- Total Pages
  248
- Publisher
  Imperial College Press
- Data Source
  KAKENHI-PROJECT-17020001
[Book] 比較ゲノムを支える情報学 : 脊椎動物ゲノム進化を推定するロジック(細胞工学 Vo1.25, No.8)2006
- Author(s)
  森下真一
- Total Pages
  6
- Publisher
  秀潤社
- Data Source
  KAKENHI-PROJECT-17020001
[Book] Large-scale genome sequence processing.2006
- Author(s)
  M. Kasahara, S. Morishita.
- Total Pages
  248
- Publisher
  Imperial College Press
- Data Source
  KAKENHI-PROJECT-17017007
[Book] Large-scale genome sequence processing.2006
- Author(s)
  Kasahara, M., Morishita, S.
- Total Pages
  248
- Publisher
  Imperial College Press
- Data Source
  KAKENHI-PROJECT-17017007
[Book] Large-scale genome sequence processing2006
- Author(s)
  Kasahara, M. (Morishita, S. )
- Total Pages
  248
- Publisher
  Imperial College Press
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Phase-separated nuclear bodies of nucleoporin fusions promote condensation of MLL1/CRM1 and rearrangement of 3D genome structure2023
- Author(s)
  Oka Masahiro、Otani Mayumi、Miyamoto Yoichi、Oshima Rieko、Adachi Jun、Tomonaga Takeshi、Asally Munehiro、Nagaoka Yuya、Tanaka Kaori、Toyoda Atsushi、Ichikawa Kazuki、Morishita Shinichi、Isono Kyoichi、Koseki Haruhiko、Nakato Ryuichiro、Ohkawa Yasuyuki、Yoneda Yoshihiro
- Journal Title
  
  Cell Reports
  
  Volume: 42 Issue: 8 Pages: 112884-112884
- DOI
  10.1016/j.celrep.2023.112884
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22KK0111, KAKENHI-PROJECT-22K19275, KAKENHI-PLANNED-19H05745, KAKENHI-PUBLICLY-22H04676, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-23H00372, KAKENHI-PROJECT-23K27373
[Journal Article] A landscape of complex tandem repeats within individual human genomes2023
- Author(s)
  Kazuki Ichikawa、Riki Kawahara、Takeshi Asano、Shinichi Morishita
- Journal Title
  
  Nature Communications
  
  Volume: 14(1) Issue: 1 Pages: 5530-5530
- DOI
  10.1038/s41467-023-41262-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] JTK: targeted diploid genome assembler2023
- Author(s)
  Bansho Masutani、Yoshihiko Suzuki、Yuta Suzuki、Shinichi Morishita
- Journal Title
  
  Bioinformatics
  
  Volume: 39 Issue: 7
- DOI
  10.1093/bioinformatics/btad398
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Meningiomas in patients with neurofibromatosis type 2 predominantly comprise 'immunogenic subtype' tumours characterised by macrophage infiltration2023
- Author(s)
  Teranishi Y, Miyawaki S, Nakatochi M, Okano A, Ikemura M, Komura D, Katoh H, Mitsui J, Morishita S, Ushiku T, Ishikawa S, Nakatomi H, Saito N.
- Journal Title
  
  Acta Neuropathologica Communications
  
  Volume: 11(1) Issue: 1 Pages: 156-156
- DOI
  10.1186/s40478-023-01645-3
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04923, KAKENHI-PROJECT-22H04925
[Journal Article] Decomposing mosaic tandem repeats accurately from long reads2023
- Author(s)
  Bansho Masutani、Riki Kawahara、Shinichi Morishita
- Journal Title
  
  Bioinformatics
  
  Volume: 39 Issue: 4
- DOI
  10.1093/bioinformatics/btad185
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Context-dependent DNA polymerization effects can masquerade as DNA modification signals2022
- Author(s)
  Yusuke Takahashi, Massa Shoura, Andrew Fire, Shinichi Morishita
- Journal Title
  
  BMC Genomics
  
  Volume: 23 Issue: 1 Pages: 249-249
- DOI
  10.1186/s12864-022-08471-2
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] MNX1-HNF1B Axis Is Indispensable for Intraductal Papillary Mucinous Neoplasm Lineages2022
- Author(s)
  Kato H, Tateishi K, Fujiwara H, Nakatsuka T, Yamamoto K, Kudo Y, Hayakawa Y, Nakagawa H, Tanaka Y, Ijichi H, Otsuka M, Iwadate D, Oyama H, Kanai S, Noguchi K, Suzuki T, Sato T, Hakuta R, Ishigaki K, Saito K, Saito T, Takahara N, Kishikawa T, Hamada T, Takahashi R, Miyabayashi K, et al.
- Journal Title
  
  Gastroenterology
  
  Volume: 162 Issue: 4 Pages: 1272-1287
- DOI
  10.1053/j.gastro.2021.12.254
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K08362, KAKENHI-PROJECT-19K08435, KAKENHI-PROJECT-19K16533, KAKENHI-PROJECT-20K08353, KAKENHI-PROJECT-21K07886, KAKENHI-PROJECT-21K07935, KAKENHI-PROJECT-20K16154, KAKENHI-PROJECT-21K15368, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-21K07906, KAKENHI-PROJECT-22K06976, KAKENHI-PROJECT-20K08324, KAKENHI-PROJECT-21K15966
[Journal Article] HNF1B‐driven three‐dimensional chromatin structure for molecular classification in pancreatic cancers2022
- Author(s)
  Kato Hiroyuki、Tateishi Keisuke、Iwadate Dosuke、Yamamoto Keisuke、Fujiwara Hiroaki、Nakatsuka Takuma、Kudo Yotaro、Hayakawa Yoku、Ijichi Hideaki、Otsuka Motoyuki、Kishikawa Takahiro、Takahashi Ryota、Miyabayashi Koji、Nakai Yousuke、Hirata Yoshihiro、Toyoda Atsushi、Morishita Shinichi、Fujishiro Mitsuhiro
- Journal Title
  
  Cancer Science
  
  Volume: 114 Issue: 4 Pages: 1672-1685
- DOI
  10.1111/cas.15690
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K19517, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-21H02893, KAKENHI-PROJECT-21K15966, KAKENHI-PROJECT-23K07350, KAKENHI-PROJECT-21K07886, KAKENHI-PROJECT-21K07907, KAKENHI-PROJECT-23K24314
[Journal Article] An analysis modality for vascular structures combining tissue-clearing technology and topological data analysis2022
- Author(s)
  Takahashi K, Abe K, Kubota SI, Fukatsu N, Morishita Y, Yoshimatsu Y, Satoshi Hirakawa, Yoshiaki Kubota, Tetsuro Watabe, Shogo Ehata, Hiroki R. Ueda, Teppei Shimamura, Kohei Miyazono
- Journal Title
  
  Nature Communiactions
  
  Volume: 13 Issue: 1 Pages: 5239-5239
- DOI
  10.1038/s41467-022-32848-2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K07094, KAKENHI-PROJECT-22K15435, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-18H05270, KAKENHI-PROJECT-20H03851, KAKENHI-PROJECT-20H04281, KAKENHI-PROJECT-20K21832, KAKENHI-PUBLICLY-22H04839, KAKENHI-PLANNED-17H06326, KAKENHI-ORGANIZER-19H05794, KAKENHI-PROJECT-20H00513
[Journal Article] Early prediction of functional prognosis in neurofibromatosis type 2 patients based on genotype-phenotype correlation with targeted deep sequencing2022
- Author(s)
  Yu Teranishi、Satoru Miyawaki、Hirofumi Nakatomi、Kenta Ohara、Hiroki Hongo、Shogo Dofuku、Atsushi Okano、Shunsaku Takayanagi、Takahiro Ota、Jun Yoshimura、Wei Qu、Jun Mitsui、Shinichi Morishita、Shoji Tsuji、Nobuhito Saito
- Journal Title
  
  Scientific Reports
  
  Volume: 12(1) Issue: 1 Pages: 9543-9543
- DOI
  10.1038/s41598-022-13580-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-19K09473, KAKENHI-PROJECT-21H03041
[Journal Article] Somatic GJA4 gain-of-function mutation in orbital cavernous venous malformations2022
- Author(s)
  Hongo Hiroki、Miyawaki Satoru、Teranishi Yu、Mitsui Jun、Katoh Hiroto、Komura Daisuke、Tsubota Kinya、Matsukawa Takashi、Watanabe Masakatsu、Kurita Masakazu、Yoshimura Jun、Dofuku Shogo、Ohara Kenta、Ishigami Daiichiro、Okano Atsushi、Kato Motoi、Hakuno Fumihiko、Takahashi Ayaka、Kunita Akiko、Ishiura Hiroyuki、et al.
- Journal Title
  
  Angiogenesis
  
  Volume: 26 Issue: 1 Pages: 37-52
- DOI
  10.1007/s10456-022-09846-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K16677, KAKENHI-PROJECT-22H04925, KAKENHI-PROJECT-19K09473, KAKENHI-PROJECT-20K07417, KAKENHI-PROJECT-20K07422, KAKENHI-PROJECT-21K20985
[Journal Article] Expression profile analysis in cells overexpressing DRPLA cDNA to explore the roles of DRPLAp as a transcriptional coregulator2022
- Author(s)
  Keiko Hatano、Hidetoshi Date、Hiroyuki Ishiura、Takashi Matsukawa、Masaki Tanaka、Jun Mitsui、Jun Goto、Jun Yoshimura、Koichiro Doi、Shinichi Morishita、Shoji Tsuji
- Journal Title
  
  Neurology and Clinical Neuroscience
  
  Volume: 10 Issue: 4 Pages: 210-217
- DOI
  10.1111/ncn3.12607
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04925
[Journal Article] Investigating the mitochondrial genomic landscape of Arabidopsis thaliana by long-read sequencing2021
- Author(s)
  Bansho Masutani, Shin-ichi Arimura, Shinichi Morishita
- Journal Title
  
  PLOS Computational Biology
  
  Volume: 17 Issue: 1 Pages: e1008597-e1008597
- DOI
  10.1371/journal.pcbi.1008597
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20H05680, KAKENHI-PROJECT-19KK0391
[Journal Article] CTCF looping is established during gastrulation in medaka embryos2021
- Author(s)
  Ryohei Nakamura, Yuichi Motai, Masahiko Kumagai, Candice L. Wike, Haruyo Nishiyama, Yoichiro Nakatani, Neva C. Durand, Shinichi Morishita, Hiroyuki Takeda, et al.
- Journal Title
  
  Genome Research
  
  Volume: 31 Issue: 6 Pages: 968-980
- DOI
  10.1101/gr.269951.120
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Collective nuclear behavior shapes bilateral nuclear symmetry for subsequent left-right asymmetric morphogenesis in Drosophila2021
- Author(s)
  Shin Dongsun、Nakamura Mitsutoshi、Morishita Yoshitaka、Eiraku Mototsugu、Yamakawa Tomoko、Sasamura Takeshi、Akiyama Masakazu、Inaki Mikiko、Matsuno Kenji
- Journal Title
  
  Development
  
  Volume: 148 Issue: 18 Pages: 1-12
- DOI
  10.1242/dev.198507
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H02488, KAKENHI-PROJECT-21K06188, KAKENHI-PROJECT-16H06279
[Journal Article] Hamster PIWI proteins bind to piRNAs with stage-specific size variations during oocyte maturation2021
- Author(s)
  Ishino Kyoko、Hasuwa Hidetoshi、Yoshimura Jun、Iwasaki Yuka W、Nishihara Hidenori、Seki Naomi M、Hirano Takamasa、Tsuchiya Marie、Ishizaki Hinako、Masuda Harumi、Kuramoto Tae、Saito Kuniaki、Sakakibara Yasubumi、Toyoda Atsushi、Itoh Takehiko、Siomi Mikiko C、Morishita Shinichi、Siomi Haruhiko
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 49 Issue: 5 Pages: 2700-2720
- DOI
  10.1093/nar/gkab059
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H05466, KAKENHI-PUBLICLY-19H05268, KAKENHI-PLANNED-19H05753, KAKENHI-PROJECT-18H02421, KAKENHI-PROJECT-18J22025, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17K19424, KAKENHI-PROJECT-20H03175, KAKENHI-PROJECT-16H06276
[Journal Article] The time is ripe to investigate human centromeres by long-read sequencing2021
- Author(s)
  Yuta Suzuki, Shinichi Morishita
- Journal Title
  
  DNA Research
  
  Volume: 28 Issue: 6
- DOI
  10.1093/dnares/dsab021
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Loss-of-function variants in NEK1 are associated with an increased risk of sporadic ALS in the Japanese population2020
- Author(s)
  Naruse Hiroya、Ishiura Hiroyuki、Mitsui Jun、Takahashi Yuji、Matsukawa Takashi、Yoshimura Jun、Doi Koichiro、Morishita Shinichi、Goto Jun、Toda Tatsushi、Tsuji Shoji
- Journal Title
  
  Journal of Human Genetics
  
  Volume: 66 Issue: 3 Pages: 237-241
- DOI
  10.1038/s10038-020-00830-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19J01720, KAKENHI-PROJECT-16H06279
[Journal Article] Comprehensive Investigation of RNF213 Nonsynonymous Variants Associated with Intracranial Artery Stenosis2020
- Author(s)
  Hongo H, Miyawaki S, Imai H, Shimizu M, Yagi S, Mitsui J, Ishiura H, Yoshimura J, Doi K, Qu W, Teranishi Y, Okano A, Ono H, Nakatomi H, Shimizu T, Morishita S, Tsuji S, and Saito N
- Journal Title
  
  Scientific reports
  
  Volume: 10(1) Issue: 1 Pages: 11942-11942
- DOI
  10.1038/s41598-020-68888-1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K09473, KAKENHI-PROJECT-17H04301, KAKENHI-PROJECT-19J12355, KAKENHI-PROJECT-16H06279
[Journal Article] CNV analysis using whole exome sequencing identified biallelic CNVs of VPS13B in siblings with intellectual disability.2020
- Author(s)
  Enomoto Y, Tsurusaki Y, Yokoi T, Abe-Hatano C, Ida K, Naruto T, Mitsui J, Tsuji S, Morishita S, Kurosawa K.
- Journal Title
  
  Eur J Med Genet.
  
  Volume: 63 Issue: 1 Pages: 103610-103610
- DOI
  10.1016/j.ejmg.2018.12.015
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Rapid and ongoing evolution of repetitive sequence structures in human centromeres2020
- Author(s)
  Yuta Suzuki, Eugene W. Myers, Shinichi Morishita
- Journal Title
  
  Science Advances
  
  Volume: 6 Issue: 50
- DOI
  10.1126/sciadv.abd9230
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Targeted deep sequencing of DNA from multiple tissue types improves the diagnostic rate and reveals a highly diverse phenotype of mosaic neurofibromatosis type 2.2020
- Author(s)
  Teranishi Y.、Miyawaki S.、Hongo H.、Dofuku S.、Okano A.、Takayanagi S.、Ota T.、Yoshimura J.、Qu W.、Mitsui J.、Nakatomi H.、Morishita S.、Tsuji S.、Saito N.
- Journal Title
  
  J Med Genet
  
  Volume: なし Issue: 10 Pages: 701-711
- DOI
  10.1136/jmedgenet-2020-106973
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17H04301, KAKENHI-PROJECT-19K24023, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-20K17954, KAKENHI-PROJECT-19K09473
[Journal Article] HiC-Hiker : a probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C2020
- Author(s)
  Ryo Nakabayashi, Shinichi Morishita
- Journal Title
  
  Bioinformatics
  
  Volume: 36 Issue: 13 Pages: 3966-3974
- DOI
  10.1093/bioinformatics/btaa288
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Finding long tandem repeats in long noisy reads2020
- Author(s)
  Shinichi Morishita, Kazuki Ichikawa, Eugene W Myers
- Journal Title
  
  Bioinformatics
  
  Volume: 37 Issue: 5 Pages: 612-621
- DOI
  10.1093/bioinformatics/btaa865
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Noncoding CGG repeat expansions in neuronal intranuclear inclusion disease, oculopharyngodistal myopathy and an overlapping disease2019
- Author(s)
  Ishiura Hiroyuki、Shibata Shota、Yoshimura Jun、Suzuki YutaMano Tatsuo、Iwata Atsushi、Toda Tatsushi、Morishita Shinichi、Tsuji Shoji、et al
- Journal Title
  
  Nature Genetics
  
  Volume: 51 Issue: 8 Pages: 1222-1232
- DOI
  10.1038/s41588-019-0458-z
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K17027, KAKENHI-PROJECT-17H05085, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-19H00597
[Journal Article] Long-read metagenomic exploration of extrachromosomal mobile genetic elements in the human gut2019
- Author(s)
  Suzuki Yoshihiko、Nishijima Suguru、Furuta Yoshikazu、Yoshimura Jun、Suda Wataru、Oshima Kenshiro、Hattori Masahira、Morishita Shinichi
- Journal Title
  
  Microbiome
  
  Volume: 7 Issue: 1 Pages: 119-119
- DOI
  10.1186/s40168-019-0737-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18J13422, KAKENHI-PROJECT-16H06279
[Journal Article] Recompleting the Caenorhabditis elegans genome.2019
- Author(s)
  Yoshimura J, Ichikawa K, Shoura MJ, Artiles KL, Gabdank I, Wahba L, Smith CL, Edgley ML, Rougvie AE, Fire AZ, Morishita S, Schwarz EM.
- Journal Title
  
  Genome Res.
  
  Volume: 29 Issue: 6 Pages: 1009-1022
- DOI
  10.1101/gr.244830.118
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] A statistical method for observing personal diploid methylomes and transcriptomes with single-molecule real-time sequencing2018
- Author(s)
  Yuta Suzuki, Yunhao Wang, Kin Au, Shinichi Morishita
- Journal Title
  
  Genes
  
  Volume: 9 Issue: 9 Pages: 460-460
- DOI
  10.3390/genes9090460
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] A framework and an algorithm to detect low-abundance DNA by a handy sequencer and a palm-sized computer2018
- Author(s)
  Bansho Masutani, Shinichi Morishita
- Journal Title
  
  Bioinformatics
  
  Volume: 35 Issue: 4 Pages: 584-592
- DOI
  10.1093/bioinformatics/bty663
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Expansions of intronic TTTCA and TTTTA repeats in benign adult familial myoclonic epilepsy2018
- Author(s)
  Ishiura Hiroyuki、Doi Koichiro、Mitsui Jun、Yoshimura Jun、Matsukawa Miho Kawabe、Takahashi Yuji、Date Hidetoshi、Matsukawa Takashi、Shimizu Jun、Koh Kishin、Takiyama Yoshihisa、Goto Jun、Morishita Shinichi、Tsuji Shoji
- Journal Title
  
  Nature Genetics
  
  Volume: 50 Issue: 4 Pages: 581-590
- DOI
  10.1038/s41588-018-0067-2
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K17772, KAKENHI-INTERNATIONAL-15K21731, KAKENHI-PROJECT-15H06161, KAKENHI-ORGANIZER-15H05871, KAKENHI-PLANNED-15H05874, KAKENHI-PROJECT-17H05085, KAKENHI-PROJECT-16K09670, KAKENHI-PROJECT-16K14571, KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-17K07255, KAKENHI-PROJECT-17K09798, KAKENHI-PROJECT-17K10888, KAKENHI-PROJECT-18K07542, KAKENHI-PROJECT-16K09681
[Journal Article] Unlinking the methylome pattern from nucleotide sequence, revealed by large-scale in vivo genome engineering and methylome editing in medaka fish2017
- Author(s)
  Napo K. M. Cheung, Ryohei Nakamura, Ayako Uno, Masahiko Kumagai, Hiroto S, Fukushima, Shinichi Morishita, Hiroyuki Takeda
- Journal Title
  
  PLOS Genetics
  
  Volume: 13 Issue: 12 Pages: e1007123-e1007123
- DOI
  10.1371/journal.pgen.1007123
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] Complete fusion of a transposon and herpesvirus created the Teratorn mobile element in medaka fish2017
- Author(s)
  Inoue Yusuke、Saga Tomonori、Aikawa Takumi、Kumagai Masahiko、Shimada Atsuko、Kawaguchi Yasushi、Naruse Kiyoshi、Morishita Shinichi、Koga Akihiko、Takeda Hiroyuki
- Journal Title
  
  Nature Communications
  
  Volume: 8 Issue: 1 Pages: 551-551
- DOI
  10.1038/s41467-017-00527-2
- NAID
  120006822516
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K15280, KAKENHI-PROJECT-26293102, KAKENHI-ORGANIZER-16H06429, KAKENHI-PLANNED-16H06433, KAKENHI-PROJECT-15H04427, KAKENHI-PROJECT-16H06279
[Journal Article] A novel GBE1 mutation in a Japanese family with adult polyglucosan body disease.2017
- Author(s)
  Yasuo Harigaya, Takashi Matsukawa, Yukio Fujita, Kazuyuki Mizushima,Hiroyuki Ishiura, Jun Mitsui, Shinichi Morishita, Mikio Shoji, Yoshio Ikeda, and Shoji Tsuji.
- Journal Title
  
  Neurol Genet
  
  Volume: 3 Issue: 2
- DOI
  10.1212/nxg.0000000000000138
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K09306, KAKENHI-PROJECT-16K09665, KAKENHI-PROJECT-16H06279
[Journal Article] Centromere evolution and CpG methylation during vertebrate speciation2017
- Author(s)
  Kazuki Ichikawa, Shingo Tomioka, Yuta Suzuki, Ryohei Nakamura, Koichiro Doi, Jun Yoshimura, Masahiko Kumagai, Yusuke Inoue, Yui Uchida, Naoki Irie, Hiroyuki Takeda* & Shinich Morishita*
- Journal Title
  
  Nature Communications
  
  Volume: 1833 Issue: 1 Pages: 1722-1730
- DOI
  10.1038/s41467-017-01982-7
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H05603, KAKENHI-PROJECT-15J03645, KAKENHI-PROJECT-16H06279
[Journal Article] Hypomethylated domain-enriched DNA motifs prepattern the accessible nucleosome organization in teleosts2017
- Author(s)
  Nakamura Ryohei、Uno Ayako、Kumagai Masahiko、Morishita Shinichi、Takeda Hiroyuki
- Journal Title
  
  Epigenetics & Chromatin
  
  Volume: 10 Issue: 1 Pages: 44-44
- DOI
  10.1186/s13072-017-0152-2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K20975, KAKENHI-PROJECT-16H06279
[Journal Article] Assessing Cell-to-Cell DNA Methylation Variability on Individual Long Reads.2016
- Author(s)
  Qu W, Tsukahara T, Nakamura R, Yurino H, Hashimoto S, Tsuji S, Takeda H, Morishita S.
- Journal Title
  
  Sci Rep.
  
  Volume: 6 Issue: 1 Pages: 21317-21317
- DOI
  10.1038/srep21317
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279
[Journal Article] AgIn: measuring the landscape of CpG methylation of individual repetitive elements2016
- Author(s)
  Yuta Suzuki, Jonas Korlach, Stephen W. Turner, Tatsuya Tsukahara, Junko Taniguchi, Wei Qu, Kazuki Ichikawa, Jun Yoshimura, Hideaki Yurino, Yuji Takahashi, Jun Mitsui, Hiroyuki Ishiura, Shoji Tsuji, Hiroyuki Takeda, Shinichi Morishita
- Journal Title
  
  Bioinformatics
  
  Volume: 32(19) Issue: 19 Pages: 2911-2919
- DOI
  10.1093/bioinformatics/btw360
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15J03645, KAKENHI-PROJECT-16H06279
[Journal Article] A novel mutation in ELOVL4 leading to spinocerebellar ataxia (SCA) with the hot cross bun sign but lacking erythrokeratodermia: a broadened spectrum of SCA34.2015
- Author(s)
  Ozaki K, Doi H, Mitsui J, Sato N, Iikuni Y, Majima T, Yamane K, Irioka T, Ishiura H, Doi K, Morishita S, Higashi M, Sekiguchi T, Koyama K, Ueda N, Miura Y, Miyatake S, Matsumoto N, Yokota T, Tanaka F, Tsuji S, Mizusawa H, Ishikawa K.
- Journal Title
  
  JAMA Neurology
  
  Volume: 72 Issue: 7 Pages: 797-805
- DOI
  10.1001/jamaneurol.2015.0610
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K09335, KAKENHI-PROJECT-15K09344, KAKENHI-PROJECT-26461549, KAKENHI-PROJECT-221S0002, KAKENHI-ORGANIZER-24118001, KAKENHI-PLANNED-24118007, KAKENHI-PROJECT-25461287
[Journal Article] A linear time algorithm for detecting long genomic regions enriched with a specific combination of epigenetic states2015
- Author(s)
  Kazuki Ichikawa, Shinichi Morishita
- Journal Title
  
  BMC Genomics
  
  Volume: 16 Issue: S2
- DOI
  10.1186/1471-2164-16-s2-s8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Associations between nucleosome phasing, sequence asymmetry, and tissue-specific expression in a set of inbred Medaka species.2015
- Author(s)
  Nakatani Y, Mello CC, Hashimoto S, Shimada A, Nakamura R, Tsukahara T, Qu W, Yoshimura J, Suzuki Y, Sugano S, Takeda H, Fire A, Morishita S.
- Journal Title
  
  BMC Genomics
  
  Volume: 16(1) Issue: 1 Pages: 978-978
- DOI
  10.1186/s12864-015-2198-5
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-221S0002, KAKENHI-PROJECT-25290071
[Journal Article] Clinicopathological features of the first Asian family having vocal cord and pharyngeal weakness with distal myopathy due to a MATR3 mutation.2015
- Author(s)
  Yamashita S, Mori A, Nishida Y, Kurisaki R, Tawara N, Nishikami T, Misumi Y, Ueyama H, Imamura S, Higuchi Y, Hashiguchi A, Higuchi I, Morishita S, Yoshimura J, Uchino M, Takashima H, Tsuji S, Ando Y.
- Journal Title
  
  Neuropathol Appl Neurobiol
  
  Volume: 41 Issue: 3 Pages: 391-398
- DOI
  10.1111/nan.12179
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-24591269, KAKENHI-PROJECT-25860718, KAKENHI-PROJECT-26860674, KAKENHI-PROJECT-221S0002
[Journal Article] Mutations in ERBB4 That Disrupt The NRG-ErbB4 Pathway Cause Autosomal Dominant Familial ALS Type 192014
- Author(s)
  Yuji Takahashi, Yoko Fukuda, Jun Yoshimura, Atsushi Toyoda, Kari Kurppa, Hiroyoko Moritoyo, Veronique Belzil, Klaus Elenius, Guy Rouleau, Asao Fujiyama, Shinichi Morishita, Jun Goto, Shoji Tsuji
- Journal Title
  
  Neurology
  
  Volume: 82
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Rapid detection of expanded short tandem repeats in personal genomics using hybrid sequencing.2014
- Author(s)
  Doi K, Monjo T, Hoang PH, Yoshimura J, Yurino H, Mitsui J, Ishiura H, Takahashi Y, Ichikawa Y, Goto J, Tsuji S, Morishita S.
- Journal Title
  
  Bioinformatics
  
  Volume: 30 Issue: 6 Pages: 815-822
- DOI
  10.1093/bioinformatics/btt647
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-ORGANIZER-22129001, KAKENHI-PLANNED-22129002, KAKENHI-PLANNED-22129008, KAKENHI-PROJECT-25461270, KAKENHI-PROJECT-25860700, KAKENHI-PROJECT-221S0002
[Journal Article] A simple but powerful heuristic method for accelerating k-means clustering of large-scale data in life science2014
- Author(s)
  Kazuki Ichikawa and Shinichi Morishita
- Journal Title
  
  IEEE/ACM Transactions on Computational Biology and Bioinformatics(TCBB)
  
  Volume: (印刷中) Issue: 4 Pages: 681-692
- DOI
  10.1109/tcbb.2014.2306200
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23241058, KAKENHI-PROJECT-221S0002
[Journal Article] Large hypomethylated domains serve as strong repressive machinery for key developmental genes in vertebrates2014
- Author(s)
  Nakamura, R., Tsukahara, T., Qu, W., Ichikawa, K., Otsuka, T., Ogoshi, K., Saito, T.L., Matsushima, K., Sugano, S., Hashimoto, S., Suzuki, Y., Morishita, S. & Takeda, H.
- Journal Title
  
  Development
  
  Volume: 141 Issue: 13 Pages: 2568-80
- DOI
  10.1242/dev.108548
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25291048, KAKENHI-PROJECT-221S0002, KAKENHI-ORGANIZER-22127001
[Journal Article] Exome sequencing shows a novel de novo mutation in ATL1.2014
- Author(s)
  Koh K, Ishiura H, Miwa M, Doi K, Yoshimura J, Mitsui J, Goto J, Morishita S, Tsuji S and Takiyama Y.
- Journal Title
  
  Neurology and Clinical Neuroscience
  
  Volume: 2 Issue: 1 Pages: 1-4
- DOI
  10.1111/ncn3.72
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-ORGANIZER-22129001, KAKENHI-PLANNED-22129002, KAKENHI-PLANNED-22129008
[Journal Article] Mutations in ERBB4 That Disrupt The NRG-ErbB4 Pathway Cause Autosomal Dominant Familial ALS Type 192014
- Author(s)
  Yuji Takahashi, Yoko Fukuda, Jun Yoshimura, Atsushi Toyoda, Kari Kurppa, Hiroyoko Moritoyo, Veronique Belzil, Klaus Elenius, Guy Rouleau, Asao Fujiyama, Shinichi Morishita, Jun Goto, Shoji Tsuji
- Journal Title
  
  Neurology
  
  Volume: 82 Pages: 1083-1083
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PLANNED-22129008
[Journal Article] Coordinated changes in DNA methylation in antigen-specific memory CD4 T cells.2013
- Author(s)
  Hashimoto S, Ogoshi K, Sasaki A, Abe J, Qu W, Nakatani Y, Ahsan B, Oshima K, Shand FH, Ametani A, Suzuki Y, Kaneko S, Wada T, Hattori M, Sugano S, Morishita S, Matsushima K.
- Journal Title
  
  J Immunol.
  
  Volume: 190(8) Pages: 4076-4091
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] The transcription start site landscape of C. elegans2013
- Author(s)
  Saito TL, Hashimoto S, Gu SG, Morton JJ, Stadler M, Blumenthal T, Fire A, Morishita S
- Journal Title
  
  Genome Research
  
  Volume: 23(8) Issue: 8 Pages: 1348-61
- DOI
  10.1101/gr.151571.112
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23241058, KAKENHI-PROJECT-25290071
[Journal Article] ERBB4 Mutations that Disrupt the Neuregulin-ErbB4 Pathway Cause Amyotrophic Lateral Sclerosis Type 19.2013
- Author(s)
  Takahashi Y, Fukuda Y, Yoshimura J, Toyoda A, (33名省略）, Morishita S, Goto J and Tsuji S.
- Journal Title
  
  Am J Hum Genet
  
  Volume: 93 Issue: 5 Pages: 900-905
- DOI
  10.1016/j.ajhg.2013.09.008
- Peer Reviewed
- Data Source
  KAKENHI-ORGANIZER-22129001, KAKENHI-PLANNED-22129002, KAKENHI-PLANNED-22129003, KAKENHI-PLANNED-22129008, KAKENHI-PUBLICLY-25110714, KAKENHI-PROJECT-25253065, KAKENHI-PROJECT-25461277, KAKENHI-PROJECT-25860700, KAKENHI-PROJECT-221S0002
[Journal Article] Comparing the Human and Fish Genomes2013
- Author(s)
  Nakatani Y, Qu W, Morishita S
- Journal Title
  
  In : eLS 2013, John Wiley & Sons Ltd
  
  Volume: (電子出版のためページ番号無し)
- DOI
  10.1002/9780470015902.a0021004.pub2
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23241058, KAKENHI-PROJECT-25830128
[Journal Article] Segmental duplications in the silkworm genome2013
- Author(s)
  Zhao Q, Zhu Z, Kasahara M, Morishita S, Zhang Z
- Journal Title
  
  BMC Genomics
  
  Volume: 14(1) Issue: 1 Pages: 521-521
- DOI
  10.1186/1471-2164-14-521
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23241058
[Journal Article] Segmental duplications in the silkworm genome.2013
- Author(s)
  Zhao Q, Zhu Z, Kasahara M, Morishita S, Zhang Z.
- Journal Title
  
  BMC Genomics
  
  Volume: 14(1) Pages: 521-521
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Coordinated Changes in DNA Methylation in Antigen-Specific Memory CD4 T Cells2013
- Author(s)
  Hashimoto S, Ogoshi K, Sasaki A, Abe J, Qu W, Nakatani Y, Ahsan B, Oshima K, Shand FH, Ametani A, Suzuki Y, Kaneko S, Wada T, Hattori M, Sugano S,Morishita S, Matsushima K
- Journal Title
  
  J Immunol
  
  Volume: 190 Issue: 8 Pages: 4076-4091
- DOI
  10.4049/jimmunol.1202267
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22390095, KAKENHI-PROJECT-23241058, KAKENHI-PROJECT-24406028, KAKENHI-PROJECT-24659216, KAKENHI-PROJECT-25290071, KAKENHI-PROJECT-25293113, KAKENHI-PROJECT-25670269, KAKENHI-PLANNED-22129008
[Journal Article] A recurrent de novo FAM111A mutation causes Kenny–Caffey syndrome type 2.2013
- Author(s)
  Isojima T, Doi K, Mitsui J, Oda Y, Tokuhiro E, Yasoda A, Yorifuji T, Horikawa R, Yoshimura J, Ishiura H, Morishita S, Tsuji S, and Kitanaka S.
- Journal Title
  
  J Bone Mineral Res
  
  Volume: 29 Issue: 4 Pages: 992-998
- DOI
  10.1002/jbmr.2091
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-ORGANIZER-22129001, KAKENHI-PLANNED-22129008, KAKENHI-PROJECT-23591489, KAKENHI-PROJECT-24791042, KAKENHI-PROJECT-25860700, KAKENHI-PROJECT-26670494, KAKENHI-PROJECT-221S0002
[Journal Article] Identification of ATP1A3 mutations by exome sequencing as the cause of alternating hemiplegia of childhood in Japanese patients.2013
- Author(s)
  Ishii A, Saito Y, Mitsui J, Ishiura H, Yoshimura J, Arai H, Yamashita S, Kimura S, Oguni H, Morishita S, Tsuji S, Sasaki M, Hirose S.
- Journal Title
  
  PLoS One
  
  Volume: 8 Issue: 2 Pages: e56120-e56120
- DOI
  10.1371/journal.pone.0056120
- Peer Reviewed
- Data Source
  KAKENHI-ORGANIZER-22129001, KAKENHI-PROJECT-23659529, KAKENHI-PROJECT-23790384, KAKENHI-PROJECT-23791201, KAKENHI-PROJECT-24249060, KAKENHI-PUBLICLY-25129708, KAKENHI-PROJECT-25670481, KAKENHI-PROJECT-25860700, KAKENHI-PROJECT-221S0002, KAKENHI-PLANNED-22129008
[Journal Article] Genome-wide genetic variations are highly correlated with proximal DNA methylation patterns2012
- Author(s)
  Qu W, Hashimoto S, Shimada A, Nakatani Y, Ichikawa K, Saito TL, Ogoshi K, Matsushima K, Suzuki Y, Sugano S, Takeda H, Morishita S.
- Journal Title
  
  Genome Res
  
  Volume: 22 Issue: 8 Pages: 1419-1425
- DOI
  10.1101/gr.140236.112
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22390095, KAKENHI-PROJECT-23241058, KAKENHI-ORGANIZER-22129001, KAKENHI-PROJECT-221S0002
[Journal Article] CSF1R mutations identified in three families with autosomal dominantly inherited leukoencephalopathy.2012
- Author(s)
  Mitsui J, Matsukawa T, Ishiura H, Higasa K, Yoshimura J, Saito TL, Ahsan B, Takahashi Y, Goto J, Iwata A, Niimi Y, Riku Y, Goto Y, Mano K, Yoshida M, Morishita S, Tsuji S.
- Journal Title
  
  Am J Med Genet B Neuropsychiatr Genet.
  
  Volume: 159B(8) Issue: 8 Pages: 951-7
- DOI
  10.1002/ajmg.b.32100
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23790384, KAKENHI-PROJECT-24390220, KAKENHI-ORGANIZER-22129001, KAKENHI-PLANNED-22129002, KAKENHI-PLANNED-22129008, KAKENHI-PROJECT-221S0002
[Journal Article] Genome-wide profiling of DNA methylation in human cancer cells2011
- Author(s)
  Ogoshi K, Hashimoto S, Nakatani Y, Qu W, Oshima K, Tokunaga K, Sugaho S, Hattori M, Morishita S, Matsushima K
- Journal Title
  
  Genomics
  
  Volume: 98 Pages: 280-287
- Peer Reviewed
- Data Source
  KAKENHI-ORGANIZER-22129001
[Journal Article] A gain-of-function screen identifies wdb and lkb1 as lifespan-extending genes in Drosophila2011
- Author(s)
  Funakoshi M, Tsuda M, Muramatsu K, Hatsuda H, Morishita S, Aigaki T
- Journal Title
  
  Biochem Biophys Res Commun
  
  Volume: 405 Pages: 667-672
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22129008
[Journal Article] A gain-of-function screen identifies wdb and lkb1 as lifespan-extending genes in Drosophila.2011
- Author(s)
  Funakoshi M, Tsuda M, Muramatsu K, Hatsuda H, Morishita S, Aigaki T.
- Journal Title
  
  Biochem Biophys Res Commun
  
  Volume: 405(4) Pages: 667-72
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22129008
[Journal Article] A gain-of-function screen identifies wdb and lkb1 as lifespan-extending genes in Drosophila2011
- Author(s)
  Funakoshi M, Tsuda M, Muramatsu K, Hatsuda H, Morishita S, Aigaki T
- Journal Title
  
  Biochem Biophys Res Commun
  
  Volume: 405 Pages: 667-672
- Peer Reviewed
- Data Source
  KAKENHI-ORGANIZER-22129001
[Journal Article] Genome-wide profiling of DNA methylation in human cancer cells2011
- Author(s)
  Katsumi Ogoshi, et al
- Journal Title
  
  Genomics
  
  Volume: 98 Issue: 4 Pages: 280-287
- DOI
  10.1016/j.ygeno.2011.07.003
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-19059004, KAKENHI-PROJECT-22390095, KAKENHI-PROJECT-23241058
[Journal Article] Genome-wide profiling of DNA methylation in human cancer cells2011
- Author(s)
  Ogoshi K, Hashimoto S, Nakatani Y, Qu W, Oshima K, Tokunaga K, Sugano S, Hattori M, Morishita S, Matsushima K
- Journal Title
  
  Genomics
  
  Volume: 98 Pages: 280-287
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22129008
[Journal Article] Cost-effective sequencing of full-length cDNA clones powered by a de novo-reference hybrid assembly2010
- Author(s)
  Kuroshu RM, Watanabe J, Sugano S, Morishita S, Suzuki Y, Kasahara M
- Journal Title
  
  PLoS One
  
  Volume: 7
- Peer Reviewed
- Data Source
  KAKENHI-ORGANIZER-22129001
[Journal Article] Accelerating Path-free XML Queries in RDBMS.2010
- Author(s)
  Hongyan Wu, Taro L Saito, Shinichi Morishita
- Journal Title
  
  IPSJ Online Transactions
  
  Volume: 3 Pages: 206-217
- NAID
  130000418305
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22129008
[Journal Article] Accelerating Path-free XML Queries in RDBMS2010
- Author(s)
  Wu H, Saito TL, Morishita S
- Journal Title
  
  IPSJ Online Transaction
  
  Volume: 3 Pages: 206-217
- NAID
  130000418305
- Peer Reviewed
- Data Source
  KAKENHI-ORGANIZER-22129001
[Journal Article] Accelerating Path-free XML Queries in RDBMS2010
- Author(s)
  Wu H, Saito TL, Morishita S
- Journal Title
  
  IPSJ Online Transaction
  
  Volume: 3 Pages: 206-217
- NAID
  130000418305
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-221S0002
[Journal Article] Cost-effective sequencing of full-length cDNA clones powered by a de novo-reference hybrid assembly.2010
- Author(s)
  Kuroshu RM, Watanabe J, Sugano S, Morishita S, Suzuki Y, Kasahara M.
- Journal Title
  
  PLoS One
  
  Volume: 5(5)
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22129008
[Journal Article] MachiBase: a Drosophila melanogaster 5'-end mRNA transcription database2009
- Author(s)
  Ahsan, B., Saito, T., Hashimoto, S., Muramatsu, K., Tsuda, M., Sasaki, A., Matsushima, K., Aigaki, T., Morishita, S.
- Journal Title
  
  Nucleic Acids Research 37
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Chromatin-Associated Periodicity in Genetic Variation Downstream of Transcriptional Start Sites2009
- Author(s)
  Sasaki, S., Mello, C., Shimada, A., Nakatani, Y., Hashimoto, S., Ogawa, M., Matsushima, K., Gu, S.G., Kasahara, M., Ahsan, B., Sasaki, A., Saito, T., Suzuki, Y., Sugano, S., Kohara, Y., Takeda, H., Fire, A., Morishita, S.
- Journal Title
  
  Science 323(5912)
  
  Pages: 401-404
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Robust and Accurate Recognition of Veins in Fruit Fly Wings2009
- Author(s)
  Hatsuda H, Muramatsu K, Aigaki T, Morishita S.
- Journal Title
  
  IEEE 6th International Symposium on Image and Signal Processing and Analysis
  
  Pages: 146-151
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Efficient frequency-based de novo short read clustering for error trimming in next-generation sequencing2009
- Author(s)
  Qu, W., Hashimoto, S., Morishita, S.
- Journal Title
  
  Genome Research 19(7)
  
  Pages: 1309-1315
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Efficient frequency-based de novo short read clustering for error trimming in next-generation sequencing2009
- Author(s)
  Qu W, Hashimoto S, Morishita S.
- Journal Title
  
  Genome Research 19(7)
  
  Pages: 1309-1315
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] UTGB Toolkit for Personalized Genome Browsers2009
- Author(s)
  Saito TL, Yoshimura J, Sasaki S, Ahsan B, Sasaki A, Kuroshu R, Morishita S.
- Journal Title
  
  Bioinformatics 25(15)
  
  Pages: 1856-1861
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] High-resolution analysis of the 5'-end transcriptome using a next generation DNA sequencer2009
- Author(s)
  Hashimoto S, Qu W, Ahsan B, Ogoshi K, Sasaki A, Nakatani Y, Lee Y, Ogawa M, Ametani A, Suzuki Y, Sugano S, Lee C C, Nutter R C, Morishita S, Matsushima K.
- Journal Title
  
  PLoS One 4(1)
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] MachiBase: a Drosophila melanogaster 5'-end mRNA transcription database2009
- Author(s)
  Ahsan, B., Saito, T.L., Hashimoto, S.I., Muramatsu, K., Tsuda, M., Sasaki, A., Matsushima, K., Aigaki, T., Morishita, S.
- Journal Title
  
  Nucleic Acids Research 37
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] MachiBase: a Drosophila melanogaster 5'-end mRNA transcription database2009
- Author(s)
  Ahsan B, Saito T, Hashimoto S, Muramatsu K, Tsuda M, Sasaki A, Matsushima K, Aigaki T, Morishita S.
- Journal Title
  
  Nucleic Acids Research Vol.37
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] High-resolution analysis of the 5'-end transcriptome using a next generation DNA sequencer2009
- Author(s)
  Hashimoto, S., Qu, W., Ahsan, B., Ogoshi, K., Sasaki, A., Nakatani, Y., Lee, Y., Ogawa, M., Ametani, A., Suzuki, Y., Sugano, S., Lee, C.C., Nutter, R.C., Morishita, S., Matsushima, K.
- Journal Title
  
  PLoS One 4(1)
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Chromatin-Associated Periodicity in Genetic Variation Downstream of Transcriptional Start Sites2009
- Author(s)
  Sasaki S, Mello C, Shimada A, Nakatani Y, Hashimoto S, Ogawa M, Matsushima K, Gu S G, Kasahara M, Ahsan B, Sasaki A, Saito T, Suzuki Y, Sugano S, Kohara Y, Takeda H, Fire A, Morishita S.
- Journal Title
  
  Science 323(5912)
  
  Pages: 401-404
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Variant between CPT1B and CHKB associated with susceptibility to narcolepsy2008
- Author(s)
  Miyagawa T, Kawashima M, Nishida N, Ohashi J, Kimura R, Fujimoto A, Shimada M, Morishita S, Shigeta T, Lin L, Hong SC, Faraco J, Shin YK, Jeong JH, Okazaki Y, Tsuji S, Honda M, Honda Y, Mignot E, Tokunaga K.
- Journal Title
  
  Nature Genetics 40(11)
  
  Pages: 1324-8
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] UTGB/medaka: genomic resource database for medaka biology2008
- Author(s)
  Ahsan, B., Kobayashi, D., Yamada, T., Kasahara, M., Sasaki, S., Saito, TL., Nagayasu, Y., Doi, K., Nakatani, Y., Qu, W., Jindo, T., Shimada, A., Naruse, K., Toyoda, A., Kuroki, Y., Fujiyama, A., Sasaki, T., Shimizu, A., Asakawa, S., Shimizu, N., Hashimoto, S., Yang, J, Lee, Y., Matsushima, K., Sugano, S., Sakaizumi, M., Narita, T., Ohishi, K., Haga, S., Ohta, F., Nomoto, H., Nogata, K., Morishita, T., Endo, T., Shin-I, T., Takeda, H., Kohara, Y., Morishita S.
- Journal Title
  
  Nucleic Acids Res. 36
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] UTGB/medaka: genomic resource database for medaka biology2008
- Author(s)
  Ahsan, B. (Morishita, S.)
- Journal Title
  
  Nucleic Acids Research 36 (Data base issue)
  
  Pages: 747-752
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] The genome of a lepidopteran model insect, the silkworm Bombyx mori.2008
- Author(s)
  The International Silkworm Genome Consortium (Morishita S is one of the corresponding authors)
- Journal Title
  
  Insect Biochemistry and Molecular Biology 38(12)
  
  Pages: 1036-1045
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] UTGB/medaka: genomic resource database for medaka biology2008
- Author(s)
  Ahsan B, (36 authors), Morishita S.
- Journal Title
  
  Nucleic Acids Research 36
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Variant between CPT1B and CHKB associated with susceptibility to narcolepsy2008
- Author(s)
  Miyagawa, T., Kawashima, M., Nishida, N., Ohashi, J., Kimura, R., Fujimoto, A., Shimada, M., Morishita, S., Shigeta, T., Lin, L., Hong, S-C., Faraco, J., Shin, Y-K., Jeong, J-H, Okazaki, Y., Tsuji, S., Honda, M., Honda, Y., Mignot, E., Tokunaga, K.
- Journal Title
  
  Nature Genetics 40(11)
  
  Pages: 1324-1328
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] The medaka draft genome and insights into vertebrate genome evolution2007
- Author(s)
  Kasahara M, (34 authors), Takeda H*, Morishita S*, Kohara Y*.
- Journal Title
  
  Nature 447
  
  Pages: 714-719
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Reconstruction of the Vertebrate Ancestral Genome Reveals Dynamic Genome Reorganization in Early Vertebrates2007
- Author(s)
  Nakatani, Y., Takeda, H., Kohara, Y., Morishita, S.
- Journal Title
  
  Genome Research 17(9)
  
  Pages: 1254-1265
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Reconstruction of the Vertebrate Ancestral Genome Reveals Dynamic Genome Reorganization in Early Vertebrates2007
- Author(s)
  Nakatani Y, Takeda H, Kohara Y, Morishita S.
- Journal Title
  
  Genome Research 17(9)
  
  Pages: 1254-1265
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] The medaka draft genome and insights into vertebrate genomeevolution2007
- Author(s)
  Kasahara, M. (Morishita, S.)
- Journal Title
  
  Nature 447
  
  Pages: 714-719
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates2007
- Author(s)
  Nakatani, Y. (Morishita, S.)
- Journal Title
  
  Genome Research 17(9)
  
  Pages: 1254-1265
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Amoeba Join : Overcoming Structural Fluctuations of XML Data.2006
- Author(s)
  Taro L.Saito, Shinichi Morishita
- Journal Title
  
  Ninth International Workshop on the Web and Databases (WebDB 2006). (online)
  
  Pages: 6-6
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] A large-scale full-length cDNA analysis to explore the budding yeast transcriptome2006
- Author(s)
  Miura, F., (Morishita, S.)
- Journal Title
  
  Proc. Natl. Acad. Sci. 103(47)
  
  Pages: 17846-17851
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] Amoeba Join : overcoming structural fluctuations of XML data2006
- Author(s)
  Saito, T., (Morishita, S.)
- Journal Title
  
  Ninth International Workshop on the Web and Databases (WebDB 2006)
  
  Pages: 45-50
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] PrimerStation : a highly specific multiplex genomic PCR primer design server for the human genome.2006
- Author(s)
  Tomoyuki Yamada, Haruhiko Souma, Shinichi Morishita
- Journal Title
  
  Nucl. Acids Res. 34
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] PrimerStation : a highly specific multiplex genomic PCR primer design server for the human genome2006
- Author(s)
  Yamada, T., (Morishita, S.)
- Journal Title
  
  Nucl. Acids Res. 34
- Data Source
  KAKENHI-PROJECT-17020001
[Journal Article] A large-scale full-length cDNA analysis to explore the budding yeast transcriptome.2006
- Author(s)
  Miura F, Kawaguchi N, Sese J, Toyoda A, Hattori M, Morishita S, Ito T
- Journal Title
  
  Proc Natl Acad Sci U S A. 103(47)
  
  Pages: 17846-17851
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] A large-scale full-length cDNA analysis to explore the budding yeast transcriptome2006
- Author(s)
  Miura F, Kawaguchi N, Sese J, Toyoda A, Hattori M, Morishita S, Ito T.
- Journal Title
  
  Proc Natl Acad Sci U S A. 103(47)
  
  Pages: 17846-51
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] PrimerStation: a highly specific multiplex genomic PCR primer design server for the human genome2006
- Author(s)
  T. Yamada, H. Souma, S. Morishita.
- Journal Title
  
  Nucleic Acids Research 34
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] dsCheck: highly sensitive off-target search software for dsRNA-mediated RNA interference2005
- Author(s)
  Naito Y, Yamada T, Matsumiya T, Ui-Tei K, Saigo K, Morishita S.
- Journal Title
  
  Nucleic Acids Research 33
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Data Mining Tools for the Saccharomyces cerevisiae Morphological Database2005
- Author(s)
  Saito TL, Sese J, Nakatani Y, Sano F, Yukawa M, Ohya Y, Morishita S.
- Journal Title
  
  Nucleic Acids Research 33
- NAID
  120006811259
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Accelerated off-target search algorithm for siRNA.2005
- Author(s)
  Tomoyuki.Yamada, Shinichi Morishita.
- Journal Title
  
  Bioinformatics 21(8)
  
  Pages: 1316-1324
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] 5'SAGE: 5'-end Serial Analysis of Gene Expression database2005
- Author(s)
  Kasai Y, Hashimoto S, Yamada T, Sese J, Sugano S, Matsushima K, Morishita S.
- Journal Title
  
  Nucleic Acids Research Database Issue 33
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] 5'SAGE : 5' -end Serial Analysis of Gene Expression database.2005
- Author(s)
  Yasuhiko Kasai, Shin-ichi Hashimoto, Tomoyuki Yamada, Jun Sese, Sumio Sugano, Kouji Matsushima, Shinichi Morishita
- Journal Title
  
  Nucl.Acids Res 33
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Accelerated off-target search algorithm for siRNA.2005
- Author(s)
  Yamada T, Morishita S.
- Journal Title
  
  Bioinformatics 21(8)
  
  Pages: 1316-1324
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] High- dimensional and large-scale phenotyping of yeast mutants2005
- Author(s)
  Ohya Y, (24 authors), Morishita S.
- Journal Title
  
  Proc Natl Acad Sci U S A. 102(52)
  
  Pages: 19015-20
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] Accelerated off-target search algorithm for siRNA2005
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Bioinformatics 21(8)
  
  Pages: 1316-1324
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Accelerated off-target search algorithm for siRNA2005
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Bioinformatics 21(8)
  
  Pages: 1316-1324
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] 5'SAGE : 5'-end Serial Analysis of Gene Expression database.2005
- Author(s)
  Yasuhiko Kasai.Shin-ichi Hashimoto, Tomoyuki Yamada, Jun Sese, Sumio Sugano, Kouji Matsushima, Shinichi Morishita.
- Journal Title
  
  Nucl. Acids Res. Database Issue 33
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Data Mining Tools for the Saccharomyces cerevisiae Morphological Database2005
- Author(s)
  Taro L.Saito (*), Jun Sese(*), Yoichiro Nakatani, Fumi Sano, Masashi Yukawa, Yoshikazu Ohya, Shinichi Morishita
- Journal Title
  
  Nucleic Acids Research 33
- NAID
  120006811259
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] 5'SAGE : 5'-end Serial Analysis of Gene Expression database2005
- Author(s)
  Yasuhiko Kasai, Shin-ichi Hashimoto, Tomoyuki Yamada, Jun Sese, Sumio Sugano, Kouji Matsushima, Shinichi Morishita
- Journal Title
  
  Nucl. Acids Res. Database Issue 33
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] dsCheck : highly sensitive off-target search software for dsRNA-mediated RNA interference.2005
- Author(s)
  Yuki Naito, Tomoyuki Yamada, Takahiro Matsumiya, Kumiko Ui-Tei, Kaoru Saigo, Shinichi Morishita
- Journal Title
  
  Nucleic Acids Research (Web Server Issue)
- Data Source
  KAKENHI-PROJECT-17017007
[Journal Article] The Genome Sequence of Silkworm2004
- Author(s)
  Kazuei Mita, Masahiro Kasahara, Shin Sasaki, Yukinobu Nagayasu, Tomoyuki Yamada, Hiroyuki Kanamori, Nobukazu Namiki, Masanari Kitagawa, Hidetoshi Yamashita, Yuji Yasukochi, Keiko Kadono-Okuda, Kimiko Yamamoto, Masahiro Ajimura, Gopalapillai Ravikumar, Michihiko Shimomura, Yoshiaki Nagamura, Tadasu Shin-i, Hiroaki Abe, Toru Shimada, Shinichi Morishita, Takuji Sasaki.
- Journal Title
  
  Bombyx mori. DNA RESEARCH Vol.11, No.1
  
  Pages: 27-35
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Constrained Clusters of Gene Expression Profiles with Pathological Features2004
- Author(s)
  Jun Sese, Yukinori Kurokawa, Morito Monden, Kikuya Kato, Shinichi Morishita
- Journal Title
  
  Bioinformatics 20
  
  Pages: 3137-3145
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing highly specific and noise tolerant oligomers efficiently2004
- Author(s)
  Yamada, T., (Morishita, S.)
- Journal Title
  
  Journal of Bioinformatics and Computational Biology 2(1)
  
  Pages: 21-46
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Computing highly specific and noise tolerant oligomers efficiently,2004
- Author(s)
  Yamada, T.et al.(Morishita, S.)
- Journal Title
  
  Journal of Bioinformatics and Computational Biology 2(1)
  
  Pages: 21-46
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] siDirect : highly effective, target-specific siRNA design software for mammalian RNA interference.2004
- Author(s)
  Yuki Naito, Tomoyuki Yamada, Kumiko Ui-Tei, Shinichi Morishita, Kaoru Saigo
- Journal Title
  
  Nucl.Acids Res. 32
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] siDirect : highly effective, target-specific siRNA design software for mammalian RNA interference.2004
- Author(s)
  Yuki Naito, Tomoyuki Yamada, Kumiko Ui-Tei, Shinichi Morishita, Kaoru Saigo
- Journal Title
  
  Nucleic Acids Research 32
  
  Pages: 124-129
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing Highly Specific and Noise Tolerant Oligomers Efficiently2004
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Journal of Bioinformatics and Computational Biology 2
  
  Pages: 21-46
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] The Genome Sequence of Silkworm, Bombyx mori2004
- Author(s)
  Kazuei Mita, Masahiro Kasahara, Shin Sasaki, Yukinobu Nagayasu, Tomoyuki Yamada, Hiroyuki Kanamori, Nobukazu Namiki, Masanari Kitagawa, Hidetoshi Yamashita, Yuji Yasukochi, Keiko Kadono-Okuda, KimikoYamamoto, Masahiro Ajimura, Gopalapillai Ravikumar, Michihiko Shimomura, Yoshiaki Nagamura, Tadasu Shin-i, Hiroaki Abe, Toru Shimada, Shinichi Morishita, Takuji Sasaki
- Journal Title
  
  DNA RESEARCH 11
  
  Pages: 27-35
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Constrained Clusters of Gene Expression Profiles with Pathological Features2004
- Author(s)
  Jun Sese, Yukinori Kurokawa, Morito Monden, Kikuya Kato, Shinichi Morishita.
- Journal Title
  
  Bioinformatics 20
  
  Pages: 3137-3145
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing Highly Specific and Noise Tolerant Oligomers Efficiently2004
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Journal of Bioinformatics and Computational Biology 2,1
  
  Pages: 21-46
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] 5'-end SAGE for the analysis of transcriptional start sites2004
- Author(s)
  Shin-ichi Hashimoto, Yutaka Suzuki, Yasuhiro Kasai, Kei Morohoshi, Tomoyuki Yamada, Jun Sese, Shinichi Morishita, Sumio Sugano, Kouji Matsushima
- Journal Title
  
  Nature Biotechnology 22
  
  Pages: 1146-1149
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] siDirect : highly effective, target-specific siRNA design software for mammalian RNA interference2004
- Author(s)
  Yuki Naito, Tomoyuki Yamada, Kumiko Ui-Tei, Shinichi Morishita, Kaoru Saigo
- Journal Title
  
  Nucl. Acids Res 32
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] 5' -end SAGE for the analysis of transcriptional start sites2004
- Author(s)
  Shin-ichi Hashimoto, Yutaka Suzuki, Yasuhiro Kasai, Kei Morohoshi, Tomoyuki Yamada, Jun Sese, Shinichi Morishita, Sumio Sugano, Kouji Matsushima
- Journal Title
  
  Nature Biotechnology 22
  
  Pages: 1146-1149
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] 5'-end SAGE for the analysis of transcriptional start sites.2004
- Author(s)
  Shin-ichi Hashimoto, Yutaka Suzuki, Yasuhiro Kasai, Kei Morohoshi, Tomoyuki Yamada, Jun Sese, Shinichi Morishita, Sumio Sugano, Kouji Matsushima.
- Journal Title
  
  Nature Biotechnology. 22
  
  Pages: 1146-1149
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Accelerated off-target search algorithm for siRNA.2004
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Bioinformatics (In press)
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing Highly Specific and Noise Tolerant Oligomers Efficiently2004
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita.
- Journal Title
  
  Journal of Bioinformatics and Computational Biology Vol.2, No.1
  
  Pages: 21-46
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Body Expression Map of the Human Genome2003
- Author(s)
  Shinichi Morishita, Asao Fujiyama
- Journal Title
  
  Encyclopedia of Molecular Cell Biology and Molecular Medicine 2
  
  Pages: 75-85
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Fast and Sensitive Algorithm for Aligning ESTs to Human Genome2003
- Author(s)
  Jun Ogasawara, Shinichi Morishita
- Journal Title
  
  Journal of Bioinformatics and Computational Biology Vol.1, No.2
  
  Pages: 363-386
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing Highly Specific and Mismatch Tolerant Oligomers Efficiently2003
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Proc. of Second IEEE Computer Society Bioinformatics Conference (CSB2003) (Stanford University)(Palo Alto, CA August) 11・14
  
  Pages: 316-325
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Fast and Sensitive Algorithm for Aligning ESTs to Human Genome2003
- Author(s)
  Jun Ogasawara, Shinichi Morishita
- Journal Title
  
  Journal of Bioinformatics and Computational Biology 1
  
  Pages: 363-386
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Body Expression Map of the Human Genome, Encyclopedia of Molecular Cell Biology and Molecular Medicine2003
- Author(s)
  Shinichi Morishita, Asao Fujiyama
- Journal Title
  
  2nd Edition Wiley-Vch
  
  Pages: 75-85
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing Highly Specific and Mismatch Tolerant Oligomers Efficiently2003
- Author(s)
  Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Proc. of Second IEEE Computer Society Bioinformatics Conference (CSB2003)
  
  Pages: 316-325
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing Optimal Hypotheses Efficiently for Boosting2002
- Author(s)
  Shinichi Morishita
- Journal Title
  
  Progress in Discovery Science
  
  Pages: 471-481
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] KDD Cup 2001 Report.2002
- Author(s)
  Jie Cheng, Christos Hatzis, Hisashi Hayashi, Mark-A. Krogel, Shinichi Morishita, David Page, Jun Sese
- Journal Title
  
  ACM SIGKDD Explorations Volume 3, Issue 2
  
  Pages: 47-64
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Answering the most correlated n association rules efficiently2002
- Author(s)
  Sese, J.et al.(Morishita, S.)
- Journal Title
  
  Proc. of 6th European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD'02)
  
  Pages: 410-422
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Answering the most correlated n association rules efficiently2002
- Author(s)
  Sese, J., (Morishita, S.)
- Journal Title
  
  Proc. of 6th European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD'02)
  
  Pages: 410-422
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] The Gene Resource Locator : genelocus maps for transcriptome analysis.2002
- Author(s)
  Toshihiko Honkura, Jun Ogasawara, Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Nucleic Acids Research, 2002 Vol.30, No.1
  
  Pages: 221-225
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] The Gene Resource Locator : gene locus maps for transcriptome analysis2002
- Author(s)
  Toshihiko Honkura, Jun Ogasawara, Tomoyuki Yamada, Shinichi Morishita
- Journal Title
  
  Nucleic Acids Research 30
  
  Pages: 221-225
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing optimal hypotheses efficiently for boosting2002
- Author(s)
  Morishita, S.
- Journal Title
  
  Progresses in Discovery Science
  
  Pages: 471-481
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Fast and Sensitive Algorithm for Aligning ESTs to Human Genome.2002
- Author(s)
  Jun Ogasawara, Shinichi Morishita
- Journal Title
  
  Proc. of First IEEE Computer Society Bioinformatics Conference Stanford University Palo Alto, CA
  
  Pages: 43-53
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Answering the Most Correlated N Association Rules Efficiently2002
- Author(s)
  Jun Sese, Shinichi Morishita
- Journal Title
  
  Proc. of 6th European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD' 02)
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing Optimal Hypotheses Efficiently for Boosting.2002
- Author(s)
  Shinichi Morishita
- Journal Title
  
  Progress in Discovery Science (Springer) 2002
  
  Pages: 471-481
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Answering the Most Correlated N Association Rules Efficiently.2002
- Author(s)
  Jun Sese, Shinichi Morishita
- Journal Title
  
  Proc. of 6thEuropean Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD'02) Helsinki, Finland
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] KDD Cup 2001 Report2002
- Author(s)
  Jie Cheng, Christos Hatzis, Hisashi Hayashi, Mark-A. Krogel, Shinichi Morishita, David Page, Jun Sese
- Journal Title
  
  ACM SIGKDD Explorations 3
  
  Pages: 47-64
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Computing optimal hypotheses efficiently for boosting2002
- Author(s)
  Morishita, S. et al.
- Journal Title
  
  Progresses in Discovery Science
  
  Pages: 471-481
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Efficient Construction of Regression Trees with Range and Region Splitting. Machine Learning2002
- Author(s)
  Yasuhiko Morimoto, Hiromu Ishii, Shinichi Morishita
- Journal Title
  
  Kluwer Academic 45
  
  Pages: 235-259
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Bodymap incorporated PCR-based expression profiling data and a gene ranking system2001
- Author(s)
  Sese, J., (Morishita, S.)
- Journal Title
  
  Nucleic Acids Research 29
  
  Pages: 156-158
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Bodymap incorporated PCR-based expression profiling data and a gene ranking system2001
- Author(s)
  Sese, J.et al.(Morishita, S.)
- Journal Title
  
  Nucleic Acids Research 29
  
  Pages: 156-158
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12207001
[Journal Article] Efficient Construction of Regression Trees with Range and Region Splitting2001
- Author(s)
  Yasuhiko Morimoto, Hiromu Ishii, Shinichi Morishita
- Journal Title
  
  Machine Learning, Kluwer Academic 45
  
  Pages: 235-259
- NAID
  110003186761
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Data Mining with Optimized Two-Dimensional Association Rules.2001
- Author(s)
  Takeshi Fukuda, Yasuhiko Morimoto, Shinichi Morishita, Takeshi Tokuyama
- Journal Title
  
  ACM Transactions on Database Systems (TODS) 26
  
  Pages: 179-213
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] Data Mining with Optimized Two-Dimensional Association Rules.2001
- Author(s)
  Takeshi Fukuda, Yasuhiko Morimoto, Shinichi Morishita, Takeshi Tokuyama
- Journal Title
  
  ACM Transactions on Database Systems (TODS) Volume 26, Issue 2
  
  Pages: 179-213
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] BodyMap incorporated PCR-based expression profiling data and a gene ranking system.2001
- Author(s)
  Jun Sese, Hitoshi Nikaidou, Shoko Kawamoto, Yuichi Minesaki, Shinichi Morishita, Kousaku Okubo
- Journal Title
  
  Nucleic Acids Res 29
  
  Pages: 156-158
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Journal Article] BodyMap incorporated PCR-based expression profiling data and a gene ranking system2001
- Author(s)
  Jun Sese, Hitoshi Nikaidou, Shoko Kawamoto, Yuichi Minesaki, Shinichi Morishita, Kousaku Okubo
- Journal Title
  
  Nucleic Acids Res 29
  
  Pages: 156-158
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-12208003
[Presentation] Characteristics of Mosaic Neurofibromatosis type 2 Revealed by Deep Sequence for Multiple Tissue DNA2020
- Author(s)
  Yu Teranishi, Satoru Miyawaki, Hiroki Hongo, Shogo Dofuku, Atsushi Okano, Shunsaku Takayanagi, Takahiro Ota, Jun Yoshimura, Wei Qu, Jun Mitsui, Hirofumi Nakatomi, Shinichi Morishita, Shoji Tsuji, Nobuhito Saito
- Organizer
  2020 European NF Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Understanding tandem repeats and DNA methylation using SMRT sequencing2018
- Author(s)
  Shinichi Morishita
- Organizer
  SMRT Leiden
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Finding tandem repeat expansions in raw long reads2018
- Author(s)
  Shinichi Morishita
- Organizer
  ADVANCES IN GENOME BIOLOGY AND TECHNOLOGY (AGBT)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Understanding tandem repeats and methylation with long-read sequencing2018
- Author(s)
  Shinichi Morishita
- Organizer
  Genome Biophysics : Integrating Genomics and Biophysics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] SMRT sequencing for understanding centromeres, meta-methylome, and meta-mobilome2017
- Author(s)
  Shinichi Morishita
- Organizer
  SMRT SCIENTIFIC SYMPOSIUM
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] Understanding centromeres, metamethylome, and metamobilome using long read sequencing2017
- Author(s)
  Shinichi Morishita
- Organizer
  The 12th International Workshop on Advanced Genomics
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H06279
[Presentation] JASPAC. 常染色体劣性遺伝が疑われた遺伝性痙性対麻痺症例のexome解析2013
- Author(s)
  石浦　浩之，高　紀信，嶋崎　晴雄，三井　純，高橋　祐二，後藤　順，吉村　淳，土井　晃一郎，森下　真一，佐々木　秀直，瀧山　嘉久，辻省次
- Organizer
  第58回日本人類遺伝学会
- Place of Presentation
  仙台
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Neuronal intranuclear inclusion diseaseの原因遺伝子探索2013
- Author(s)
  曽根淳、田中章景、中村亮一、北川尚之、菅野純夫、鈴木穣、森下真一、祖父江元
- Organizer
  第54回日本神経学会学術大会
- Place of Presentation
  東京国際フォーラム、東京都千代田区
- Data Source
  KAKENHI-PROJECT-24591257
[Presentation] Genetic Variation Associated with Nucleosome Structure and DNA Methylation2011
- Author(s)
  Shinichi Morishita
- Organizer
  BioSoft-2011
- Place of Presentation
  Beijing, China
- Year and Date
  2011-03-23
- Data Source
  KAKENHI-PLANNED-22129008
[Presentation] Genetic Variation Associated with Nucleosome Structure and DNA Methylation2011
- Author(s)
  Shinichi Morishita
- Organizer
  Fish Genome Meeting
- Place of Presentation
  Sanger Center, UK
- Year and Date
  2011-03-11
- Data Source
  KAKENHI-PLANNED-22129008
[Presentation] Genetic Variation Associated with Nucleosome Structure and DNA Methylation2011
- Author(s)
  Shinichi Morishita
- Organizer
  Fish Genome Meeting
- Place of Presentation
  Sanger Center, Cambridge, UK
- Year and Date
  2011-03-11
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Genetic Variation Associated with Nucleosome Structure and DNA Methylation2011
- Author(s)
  Shinichi Morishita
- Organizer
  Fish Genome Meeting
- Place of Presentation
  Sanger Center, Cambridge, UK
- Year and Date
  2011-03-11
- Data Source
  KAKENHI-ORGANIZER-22129001
[Presentation] Searching Massive Epigenome Data for Evolutionarily Conserved Sequence Motifs2011
- Author(s)
  Shinichi Morishita
- Organizer
  IEEE International Conference on Computational Advances in Bio and medical Sciences
- Place of Presentation
  Orland, Florida, USA
- Year and Date
  2011-02-03
- Data Source
  KAKENHI-ORGANIZER-22129001
[Presentation] Searching Massive Epigenome Data for Evolutionarily Conserved Sequence Motifs2011
- Author(s)
  Shinichi Morishita
- Organizer
  The 1st Data Intensive Science Workshop
- Place of Presentation
  Tokyo, Japan
- Year and Date
  2011-03-09
- Data Source
  KAKENHI-PLANNED-22129008
[Presentation] Searching Massive Epigenome Data for Evolutionarily Conserved Sequence Motifs2011
- Author(s)
  Shinichi Morishita
- Organizer
  IEEE International Conference on Computational Advances in Bio and medical Sciences
- Place of Presentation
  Orland, Florida, USA
- Year and Date
  2011-02-03
- Data Source
  KAKENHI-PROJECT-221S0002
[Presentation] Searching Massive Epigenome Data for Evolutionarily Conserved Sequence Motifs2011
- Author(s)
  Shinichi Morishita
- Organizer
  First International IEEE Conference on Computational Advances in Bio and medical Sciences (ICCABS 2011)
- Place of Presentation
  Orlando, Florida, USA
- Year and Date
  2011-02-03
- Data Source
  KAKENHI-PLANNED-22129008
[Presentation] Chromatin- associated periodicity in genetic variation downstream of transcriptional start sites2009
- Author(s)
  Shinichi Morishita
- Organizer
  The 8th International Workshop on Advanced Genomics
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-17017007
[Presentation] Chromatin-Associated Periodicity in Genetic Variation Downstream of Transcriptional Start Sites2008
- Author(s)
  森下真一
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会合同大会シンポジウム「超高速シーケンサーとバイオインフォマティクス」
- Place of Presentation
  神戸
- Year and Date
  2008-12-11
- Data Source
  KAKENHI-PROJECT-17020001
[Presentation] Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites2008
- Author(s)
  森下真一
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会合同大会シンポジウム「超高速シーケンサーとバイオインフォマティクス」
- Place of Presentation
  神戸
- Year and Date
  2008-12-11
- Data Source
  KAKENHI-PROJECT-17020001
[Presentation] Efficient Integration of Structure Indexes of XML.2007
- Author(s)
  Saito, T. L. and Morishita, S.
- Organizer
  The 12th International Conference on Database Systems for Advanced Applications (DASFAA)
- Place of Presentation
  Bangkok
- Year and Date
  2007-04-11
- Data Source
  KAKENHI-PROJECT-17020001
[Presentation] Observing Heterozygotic DNA Methylation Patterns in diploid genomes using kinetics data from PacBio RS
- Author(s)
  Yuta Suzuki, Tatsuya Tsukahara, Hiroyuki Takeda, Shinichi Morishita
- Organizer
  AGBT 2015
- Place of Presentation
  Florida, USA
- Year and Date
  2015-02-25 – 2015-02-27
- Data Source
  KAKENHI-PLANNED-22129008
[]
[]

1. SESE Jun (40361539)

# of Collaborated Projects: 5 results

# of Collaborated Products: 19 results
2. TAKAGI Toshihisa (30110836)

# of Collaborated Projects: 4 results

# of Collaborated Products: 0 results
3. TSUJI Shoji (70150612)

# of Collaborated Projects: 4 results

# of Collaborated Products: 10 results
4. TOYODA Atsushi (10267495)

# of Collaborated Projects: 4 results

# of Collaborated Products: 2 results
5. KASAHARA Masahiro (60376605)

# of Collaborated Projects: 4 results

# of Collaborated Products: 2 results
6. KUHARA Satoru (00153320)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
7. ITOH Takehiko (90501106)

# of Collaborated Projects: 3 results

# of Collaborated Products: 4 results
8. MATSUDA Hideo (50183950)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
9. SUGANO Sumio (60162848)

# of Collaborated Projects: 3 results

# of Collaborated Products: 3 results
10. SUZUKI Yutaka (40323646)

# of Collaborated Projects: 3 results

# of Collaborated Products: 7 results
11. HAYASHI Tetsuya (10173014)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
12. KUROKAWA Ken (20343246)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
13. NAKAMURA Yasukazu (60370920)

# of Collaborated Projects: 3 results

# of Collaborated Products: 4 results
14. IWASAKI Wataru (50545019)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
15. TAKAHASHI Hiroki (60548460)

# of Collaborated Projects: 3 results

# of Collaborated Products: 3 results
16. ASAI Kiyoshi (30356357)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
17. OGURA Yoshitoshi (40363585)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
18. HIRAKAWA Hideki (80372746)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
19. NOGUCHI Hideki (50333349)

# of Collaborated Projects: 3 results

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20. HAMADA Michiaki (00596538)

# of Collaborated Projects: 3 results

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21. MASUI Tohru (50150082)

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22. KOHARA Yuji (70135292)

# of Collaborated Projects: 2 results

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23. KATO Kazuto (10202011)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
24. INOUE Ituro (00192500)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
25. SAKAKIBARA Yasubumi (10287427)

# of Collaborated Projects: 2 results

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26. YAMAGATA Zentaro (10210337)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
27. MUTO Kaori (50345766)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
28. IDA Ryuichi (40127543)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
29. FUJIYAMA Asao (60142311)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
30. TOKUNAGA Katsushi (40163977)

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Morishita Shinichi 森下 真一

森下 真一

MORISHITA Shinichi 森下 真一

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Genome evolution induced by chromatin structure and DNA methylationPrincipal Investigator

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Exploring informatics for brain diseases based on personal genomicsPrincipal Investigator

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Technology for analyzing biological functions from phenomePrincipal Investigator

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Knowledge Discovery from Genome DatabasesPrincipal Investigator

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QUERY OPTIMIZATION TECHNIQUE FOR DATA MININGPrincipal Investigator

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Morishita Shinichi 森下真一

森下真一

MORISHITA Shinichi 森下真一

[Book] 東京大学ゲノム医科学研究機構監修「ゲノム医科学 -医療ビッグデータの活用とゲノム医療の実践-」2017

[Book] 実験医学増刊「RNA-Seq実験ハンドブック」2016